CmoCh05G012600 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G012600
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr05: 9794981 .. 9795583 (+)
RNA-Seq Expression	CmoCh05G012600
Synteny	CmoCh05G012600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCAAACAAGGACATGTATCACCTCTCGATGGAACGTAACCTTCTGGTCCATGGATCCCGTCTCTAGCTTCACTGCTCTTTTGGGTCGAGGTTGGATGTATGTTTAGATATTTCCTCTCTTAAAATTTATTCACGCGATTGATTGTTGTTTGTGCTGTCTTTTTGTGCTTGTTGTTTTGTGGTTAATATGCTTGTCTTGTCTCTTCTCTTTGTCTACCTTTGTCCTCGTGTATCTCGACCTCGAACGGGATAGACGAGTAAAAGAGTAATTTACTTCGAAAAAGAATACGAATATTTGGAAATGTAGACTAAAATACAAATCTTTGGATTGGAATACGTTTGATTGTGAAAATGTTCCATAGGAATCATAATTAAGCCTTCAAAGTCTCCTCTTTTGATGTCACTCAATTTATTTTCCCATCTTCACTTTCCCTTTCAGATTCCCGAGAAAAAGAAAAGGAAAATTCACATCACTCCCACCTCCTCCGCCACTTGCCGCTGTCCATTTGGCTCTGTTCTGTTCTGTTCTGTTCACCGCCACAGAGATTCTCTCTGTTCTTCTTCTCTCCGCCCTGTTTTGCTGCCACCGCTGCTTTTAA

mRNA sequence

ATGGACCAAACAAGGACATGTATCACCTCTCGATGGAACGTAACCTTCTGGTCCATGGATCCCGTCTCTAGCTTCACTGCTCTTTTGGGTCGAGGTTGGATATTCCCGAGAAAAAGAAAAGGAAAATTCACATCACTCCCACCTCCTCCGCCACTTGCCGCTGTCCATTTGGCTCTGTTCTGTTCTGTTCTGTTCACCGCCACAGAGATTCTCTCTGTTCTTCTTCTCTCCGCCCTGTTTTGCTGCCACCGCTGCTTTTAA

Coding sequence (CDS)

ATGGACCAAACAAGGACATGTATCACCTCTCGATGGAACGTAACCTTCTGGTCCATGGATCCCGTCTCTAGCTTCACTGCTCTTTTGGGTCGAGGTTGGATATTCCCGAGAAAAAGAAAAGGAAAATTCACATCACTCCCACCTCCTCCGCCACTTGCCGCTGTCCATTTGGCTCTGTTCTGTTCTGTTCTGTTCACCGCCACAGAGATTCTCTCTGTTCTTCTTCTCTCCGCCCTGTTTTGCTGCCACCGCTGCTTTTAA

Protein sequence

MDQTRTCITSRWNVTFWSMDPVSSFTALLGRGWIFPRKRKGKFTSLPPPPPLAAVHLALFCSVLFTATEILSVLLLSALFCCHRCF

Homology

[Close]

BLAST of CmoCh05G012600 vs. NCBI nr
Match: KAG6599344.1 (Reticulon-like protein B21, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 69.7 bits (169), Expect = 1.4e-08
Identity = 31/32 (96.88%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 1  MDQTRTCITSRWNVTFWSMDPVSSFTALLGRG 33
          MDQTRTCITSRWNVTFWSMDPVSSF ALLGRG
Sbjct: 1  MDQTRTCITSRWNVTFWSMDPVSSFIALLGRG 32

The following BLAST results are available for this feature:

BLAST of CmoCh05G012600 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh05G012600 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh05G012600 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599344.1	1.4e-08	96.88	Reticulon-like protein B21, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmoCh05G012600 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G012600.1	CmoCh05G012600.1	mRNA