Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACACTGCCATCTAAAAATGATTTGCCTCCTCATTCTAATCGCCCTCAATTTCAGTTTCCTCGACCTCTCACAGGCCAGGCACCACAACAACCTCCCTTCCACGGCCGCGGTCGTCGGTACCGTCTTCTGCGACACGTGTTTTCAAGACACGTTTTCTAAGTCAAGTCACTTCATTTCAGGTACTTTACCAACTAGCTTGTAGAATTAATATGATGTTGGTTTGTTCAGATATTGATGCGTACTATTTAGGCGCGACGGTGGCTGTCGAATGTGGCGATGGGGGATCGAACCCGAGTTTTAGAGACGAAGTAAAGACAGACAAAACAGGGGAATTCAAGATTCAGCTGCCAGTTTCAGTGAGGAAGATTGAGGAATGTTATGTGCGGTTAATAAGAAGCAGTGAACCATATTGTGCGGTGGCTGCAAGAGCCAAATCATCATCGCTTAAGCTCAAGTCAAGAAAACAAGGCACGCATGTGTTCTCGGCTGGATTCTTCACTTTCAAGCCTCTTAAACACCCAAAACTTTGCAGCCATAACTCACATTCTAGTGAATTTGATGACACGAAACAAGTCGTTGACTTCCCGGGGTTACCGGCTCCGATCCAGAACCCGACCGTGCCGAATGTTCCTCGGATTTACGATAACCTTCCGCCTCTAACTCTTCTTCCTGGACTTCCTCCATTGCCTCAGCTTCCTCCTCTCCCTCCTCTTCCACCTCTCCCTGTTTTTCCATTGTTTCCACCAAAAAAGGATGATGAAAATGTACAAACTCCAAAGATAAGTCAAAACCCGGACATGTTTCATCCACAAACTCTCCTTCCAATTCCATCTTTAAAGCCTTTGAGGCCACATTTTGTTATGCCTCCACATAAGCTGCGTCACCATCCTCTCACGCATGGTCCTTTTTCGCCTTCATTCTCAACTCCTACACCGCCCTCGGCCGCCGCCGACGAGTTAGCTCCGTCCCCGCCGCTCCCTTTTTCACTCCCACCCATCCCTCGTATGCCCGAGATCTCCTCACCTCCAAAGGAAACTTCTCCTTAAAAAATTGTAACGACCCTTGTTTTCAAATGATTTCAGTAACAAAAATAAAACTTTGAATTAGTAGTTTTTACCTATTCATAGTACGAATTAGTAATTGTGAACGAAATCGATGAACTTGCGAGTAGATGATGGGATTTGACATGAAAGATTGTGTTGTTTTGGATAAGATTGATCGTATGATTATTCAAATCATCAAAGGTTTATCAAATGGATTAAATTGGACGATTGATCCAATTGCTTTTGTTTGTTATGGATTTTGTTCTTTTGTGATCAATAATTTGAATATGTTATTTTATTTTCTAAATCTTGTTTAAACAAAAAAAAATTATTATAAAAGGACATAAATTTCAGACCTTAAAAAAAATGACAATTAAGTAAAATTATAATGATGCTGATATTCAAAATATATATATAAAAAATGTATCGAAGAAAAAAATGTGAAATCTTTTTCCAAGCAAGAACAAAATTATTTTATCCTTTTTAGCAGGAGACAAATTATACATTCGATTCGAGAGAGGATAATAAATGTTTTTATCGGTTCATGAAGATTCAAATCCCGAAAGTAAATTTAGGTTGAAATTGGTACCAAATCCTAAATTTGTAGCAGTTCTTGGGGGAGTAGACACATAGTGGAGATTAAATTAGAGCGTTCTATCGAACAAAACCATCGAAGCAAAGGAGTCACCGGGAGCGCGATAAACAGAGGGGAAGAGGGCAGTAGCTTTATTTTCGCGGAATTCGTAGCTTTAATTTCATCGCCTTCAATTCCTTTTTCCAATCTAAACGCCCCTTCAAACGCGCAATCTTGATTTAGCTTGAAATCCCAATTATCTGCGTGCGTGATTTTTCCCAAAAAGTGCACGTATATATTTTCCGTATATTCTCCCGATTTCCGTCTTCCAGGTTTCTCTGTCCTCCACCCACCCACCCACCCACCCACCGAAGATCGTATTTTCTTTCGGTCTTCTCTTCTCCCTCCACTTTACTGCTCTTTCAAGGTGCGCTTCTATTTTTCTCCTTTTTCGTATGAATAGTTCAAGGGCATCCCGATGATCGCCCCAAATTTGTATTGTTCTGTATTGGGATTCTCAGTTTTTTTCATGATTTGTGCGTATTCATGGTCCGATCGTCCATTTTTTGAGTTTTTTCTTGTGGGATTGTCGTATAATTTCAATAGTTTTTGATGATCATGATCAGCTTGGTATGCTATTGATGTTGTCAAGGTATCTTGTTTCCTCCTCATCGAAGGAAAGAATATGTGTTTTCAGAGGTCACCCAGAAAAAAAATCTCAATTTCTTTAGACGAGAGGGTAATTTTGACGAAGATTATGGCATTTTATTAACCCTTTGATTGATTTCTGGCTGTTTCAACAAATTTTTGTTTCATTATTGTGATGAGTGCAGCAAAGGATTGCTGCCGACAGATTTATGTTCCTTGAAATAATGCCGATTGTTGGTTTAATGAACGATCTTAGTAGAATTTTTTTGATTTGACTTGCTATCTTGGCGATCGCATAGGCATTTATGCATCATAGTTGGTTTAAGGATAATCCCTTGGGATCCTCATTTGATTATCAGTGTTACTGAACTGTGGCTGCTTATTTTACAGGTGAAATTCACAGTTTGA
mRNA sequence
AACACTGCCATCTAAAAATGATTTGCCTCCTCATTCTAATCGCCCTCAATTTCAGTTTCCTCGACCTCTCACAGGCCAGGCACCACAACAACCTCCCTTCCACGGCCGCGGTCGTCGGTACCGTCTTCTGCGACACGTGTTTTCAAGACACGTTTTCTAAGTCAAGTCACTTCATTTCAGGCGCGACGGTGGCTGTCGAATGTGGCGATGGGGGATCGAACCCGAGTTTTAGAGACGAAGTAAAGACAGACAAAACAGGGGAATTCAAGATTCAGCTGCCAGTTTCAGTGAGGAAGATTGAGGAATGTTATGTGCGGTTAATAAGAAGCAGTGAACCATATTGTGCGGTGGCTGCAAGAGCCAAATCATCATCGCTTAAGCTCAAGTCAAGAAAACAAGGCACGCATGTGTTCTCGGCTGGATTCTTCACTTTCAAGCCTCTTAAACACCCAAAACTTTGCAGCCATAACTCACATTCTAGTGAATTTGATGACACGAAACAAGTCGTTGACTTCCCGGGGTTACCGGCTCCGATCCAGAACCCGACCGTGCCGAATGTTCCTCGGATTTACGATAACCTTCCGCCTCTAACTCTTCTTCCTGGACTTCCTCCATTGCCTCAGCTTCCTCCTCTCCCTCCTCTTCCACCTCTCCCTGTTTTTCCATTGTTTCCACCAAAAAAGGATGATGAAAATGTACAAACTCCAAAGATAAGTCAAAACCCGGACATGTTTCATCCACAAACTCTCCTTCCAATTCCATCTTTAAAGCCTTTGAGGCCACATTTTGTTATGCCTCCACATAAGCTGCGTCACCATCCTCTCACGCATGGTCCTTTTTCGCCTTCATTCTCAACTCCTACACCGCCCTCGGCCGCCGCCGACGAGTTAGCTCCGTCCCCGCCGCTCCCTTTTTCACTCCCACCCATCCCTCGTTTCTCTGTCCTCCACCCACCCACCCACCCACCCACCGAAGATCGTATTTTCTTTCGGTCTTCTCTTCTCCCTCCACTTTACTGCTCTTTCAAGGTGAAATTCACAGTTTGA
Coding sequence (CDS)
ATGATTTGCCTCCTCATTCTAATCGCCCTCAATTTCAGTTTCCTCGACCTCTCACAGGCCAGGCACCACAACAACCTCCCTTCCACGGCCGCGGTCGTCGGTACCGTCTTCTGCGACACGTGTTTTCAAGACACGTTTTCTAAGTCAAGTCACTTCATTTCAGGCGCGACGGTGGCTGTCGAATGTGGCGATGGGGGATCGAACCCGAGTTTTAGAGACGAAGTAAAGACAGACAAAACAGGGGAATTCAAGATTCAGCTGCCAGTTTCAGTGAGGAAGATTGAGGAATGTTATGTGCGGTTAATAAGAAGCAGTGAACCATATTGTGCGGTGGCTGCAAGAGCCAAATCATCATCGCTTAAGCTCAAGTCAAGAAAACAAGGCACGCATGTGTTCTCGGCTGGATTCTTCACTTTCAAGCCTCTTAAACACCCAAAACTTTGCAGCCATAACTCACATTCTAGTGAATTTGATGACACGAAACAAGTCGTTGACTTCCCGGGGTTACCGGCTCCGATCCAGAACCCGACCGTGCCGAATGTTCCTCGGATTTACGATAACCTTCCGCCTCTAACTCTTCTTCCTGGACTTCCTCCATTGCCTCAGCTTCCTCCTCTCCCTCCTCTTCCACCTCTCCCTGTTTTTCCATTGTTTCCACCAAAAAAGGATGATGAAAATGTACAAACTCCAAAGATAAGTCAAAACCCGGACATGTTTCATCCACAAACTCTCCTTCCAATTCCATCTTTAAAGCCTTTGAGGCCACATTTTGTTATGCCTCCACATAAGCTGCGTCACCATCCTCTCACGCATGGTCCTTTTTCGCCTTCATTCTCAACTCCTACACCGCCCTCGGCCGCCGCCGACGAGTTAGCTCCGTCCCCGCCGCTCCCTTTTTCACTCCCACCCATCCCTCGTTTCTCTGTCCTCCACCCACCCACCCACCCACCCACCGAAGATCGTATTTTCTTTCGGTCTTCTCTTCTCCCTCCACTTTACTGCTCTTTCAAGGTGAAATTCACAGTTTGA
Protein sequence
MICLLILIALNFSFLDLSQARHHNNLPSTAAVVGTVFCDTCFQDTFSKSSHFISGATVAVECGDGGSNPSFRDEVKTDKTGEFKIQLPVSVRKIEECYVRLIRSSEPYCAVAARAKSSSLKLKSRKQGTHVFSAGFFTFKPLKHPKLCSHNSHSSEFDDTKQVVDFPGLPAPIQNPTVPNVPRIYDNLPPLTLLPGLPPLPQLPPLPPLPPLPVFPLFPPKKDDENVQTPKISQNPDMFHPQTLLPIPSLKPLRPHFVMPPHKLRHHPLTHGPFSPSFSTPTPPSAAADELAPSPPLPFSLPPIPRFSVLHPPTHPPTEDRIFFRSSLLPPLYCSFKVKFTV
Homology
BLAST of CmoCh04G029450 vs. ExPASy TrEMBL
Match:
A0A6J1HD47 (amyloid beta A4 precursor protein-binding family B member 1-interacting protein-like OS=Cucurbita moschata OX=3662 GN=LOC111463006 PE=4 SV=1)
HSP 1 Score: 610.1 bits (1572), Expect = 5.5e-171
Identity = 307/313 (98.08%), Postives = 308/313 (98.40%), Query Frame = 0
Query: 1 MICLLILIALNFSFLDLSQARHHNNLPSTAAVVGTVFCDTCFQDTFSKSSHFISGATVAV 60
MICLLILIALNFSFLDLSQARHHNNLPSTAAVVGTVFCDTCFQDTFSKSSHFISGATVAV
Sbjct: 1 MICLLILIALNFSFLDLSQARHHNNLPSTAAVVGTVFCDTCFQDTFSKSSHFISGATVAV 60
Query: 61 ECGDGGSNPSFRDEVKTDKTGEFKIQLPVSVRKIEECYVRLIRSSEPYCAVAARAKSSSL 120
ECGDGGSNPSFRDEVKTDKTGEFKIQLPVSVRKIEECYVRLIRSSEPYCAVAARAKSSSL
Sbjct: 61 ECGDGGSNPSFRDEVKTDKTGEFKIQLPVSVRKIEECYVRLIRSSEPYCAVAARAKSSSL 120
Query: 121 KLKSRKQGTHVFSAGFFTFKPLKHPKLCSHNSHSSEFDDTKQVVDFPGLPAPIQNPTVPN 180
KLKSRKQGTHVFSAGFFTFKPLKHPKLCSHNSHSSEFDDTKQVVDFPGLPAPIQNPTVPN
Sbjct: 121 KLKSRKQGTHVFSAGFFTFKPLKHPKLCSHNSHSSEFDDTKQVVDFPGLPAPIQNPTVPN 180
Query: 181 VPRIYDNLPPLTLLPGLPPLPQLPPLPPLPPLPVFPLFPPKKDDENVQTPKISQNPDMFH 240
VPRIYDNLPPLTLLPGLPPLPQLPPLPPLPPLPVFPLFPPKKDDENVQTPKISQNPDMFH
Sbjct: 181 VPRIYDNLPPLTLLPGLPPLPQLPPLPPLPPLPVFPLFPPKKDDENVQTPKISQNPDMFH 240
Query: 241 PQTLLPIPSLKPLRPHFVMPPHKLRHHPLTHGPFSPSFSTPTPPSAAADELAPSPPLPFS 300
PQTLLPIPSLKPLRPHFVMPPHKLRHHPLTHGPFSPSFSTPTPPSAAADELAPSPPLPFS
Sbjct: 241 PQTLLPIPSLKPLRPHFVMPPHKLRHHPLTHGPFSPSFSTPTPPSAAADELAPSPPLPFS 300
Query: 301 LPPIPRFSVLHPP 314
LPPIPR + P
Sbjct: 301 LPPIPRMPEISSP 313
BLAST of CmoCh04G029450 vs. ExPASy TrEMBL
Match:
A0A6J1JRA2 (amyloid beta A4 precursor protein-binding family B member 1-interacting protein-like OS=Cucurbita maxima OX=3661 GN=LOC111487127 PE=4 SV=1)
HSP 1 Score: 547.0 bits (1408), Expect = 5.7e-152
Identity = 277/305 (90.82%), Postives = 290/305 (95.08%), Query Frame = 0
Query: 1 MICLLILIALNFSFLDLSQARHHNNLPS-TAAVVGTVFCDTCFQDTFSKSSHFISGATVA 60
MICLLILIALNFSFLDLSQARHHNNLPS AAVVGTVFCDTCFQDTFSK+SHFISGATVA
Sbjct: 1 MICLLILIALNFSFLDLSQARHHNNLPSAAAAVVGTVFCDTCFQDTFSKTSHFISGATVA 60
Query: 61 VECGDGGSNPSFRDEVKTDKTGEFKIQLPVSVRKIEECYVRLIRSSEPYCAVAARAKSSS 120
VECG+ GSNP+FR+EVKTDKTGEFKIQLPVSVRK+EECYVRLIRSSEPYCAVAARAKSSS
Sbjct: 61 VECGNEGSNPNFREEVKTDKTGEFKIQLPVSVRKVEECYVRLIRSSEPYCAVAARAKSSS 120
Query: 121 LKLKSRKQGTHVFSAGFFTFKPLKHPKLCSHNSHSSEFDDTKQVVDFPGLPAPIQNPTVP 180
L+LKS+KQGTHVFSAGFFTFKPLK PKLCSHNSHS+EFDDTKQVVDFPGLPAPIQNPTVP
Sbjct: 121 LRLKSKKQGTHVFSAGFFTFKPLKQPKLCSHNSHSNEFDDTKQVVDFPGLPAPIQNPTVP 180
Query: 181 NVPRIYDNLPPLTLLPGLPPLPQLPPLPPLPPLPVFPLFPPKKDDENVQTPKISQNPDMF 240
NVPRIYDNLPPL LLPGLPPLPQLPPLPPLPPLP+FPLFPPKKDDENVQTPKISQNPD+F
Sbjct: 181 NVPRIYDNLPPLPLLPGLPPLPQLPPLPPLPPLPIFPLFPPKKDDENVQTPKISQNPDLF 240
Query: 241 HPQTLLPIPSLKPLRPHFVMPPHKLRHHPLTHGPFSPSFSTPTPPSAAADELAPSPPLPF 300
HPQTLLPIPSLKPLRPHFVMPPHKLRHHPLTHGP P+ + +AA ELAPSPPLPF
Sbjct: 241 HPQTLLPIPSLKPLRPHFVMPPHKLRHHPLTHGPTPPTAAALA--AAAGGELAPSPPLPF 300
Query: 301 SLPPI 305
SLPPI
Sbjct: 301 SLPPI 303
BLAST of CmoCh04G029450 vs. ExPASy TrEMBL
Match:
A0A6J1BYU3 (proline-rich protein 4-like OS=Momordica charantia OX=3673 GN=LOC111006489 PE=4 SV=1)
HSP 1 Score: 346.3 bits (887), Expect = 1.5e-91
Identity = 203/326 (62.27%), Postives = 229/326 (70.25%), Query Frame = 0
Query: 1 MICLLILIALNFSFLDLSQARHHNNLPSTAAVVGTVFCDTCFQDTFSKSSHFISGATVAV 60
M+ LLIL+ LN SF DLSQARHH NLPS A +VGTVFCDTC Q+ SK+S FISGATVAV
Sbjct: 1 MVWLLILLILNLSFCDLSQARHHKNLPS-AVIVGTVFCDTCSQEKLSKTSRFISGATVAV 60
Query: 61 ECGDGGSNPSFRDEVKTDKTGEFKIQLPVS----VRKIEECYVRLIRSSEPYCAVAARAK 120
ECG+GG PSFR+EVKTDK GEFK+ LPVS V+ IE C V LIRSSE YCAVAA A
Sbjct: 61 ECGNGGPKPSFREEVKTDKRGEFKVDLPVSVSRHVKTIEGCSVNLIRSSEAYCAVAAAAT 120
Query: 121 SSSLKLKSRKQGTHVFSAGFFTFKPLKHPKLCSHNSHSSEFDDTKQ---VVDFPGLPAPI 180
SSS +LKSR QGTH FSAGFFTFKPLKHP +C+ +S+ F D KQ ++D+P LP PI
Sbjct: 121 SSSFELKSRNQGTHFFSAGFFTFKPLKHPNICTQKPYSNTFHDMKQALPMLDYPALPTPI 180
Query: 181 QNPT-VPNVPRIYDNLPPLTLLPGLPPLPQLPPLPPLPPLPVFPLFPPKKDDENVQTPKI 240
+NPT VPNVPRIYDNLPPL LP LPPLPQLPPLPPLPPLP FP+FPPKK EN K
Sbjct: 181 ENPTIVPNVPRIYDNLPPLPFLPRLPPLPQLPPLPPLPPLPGFPIFPPKKTVENAPNGK- 240
Query: 241 SQNPDMFHPQTLLPIPSLKPLRPHFVMPPHKLRHHPLTHGPFSPS---FSTPTPPSAAA- 300
TLL P K LRPHFV+PPH+L+H PL P PS F P PP AAA
Sbjct: 241 ----------TLL--PHKKHLRPHFVLPPHRLQHPPLF--PNIPSLLPFEIPPPPVAAAV 300
Query: 301 ---------DELAPSPPLPFSLPPIP 306
+P+ P PF +PP+P
Sbjct: 301 GAVAGGSVPSPPSPTSPTPFPIPPVP 310
BLAST of CmoCh04G029450 vs. ExPASy TrEMBL
Match:
A0A5A7T850 (Major pollen allergen Lol p 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002260 PE=4 SV=1)
HSP 1 Score: 343.2 bits (879), Expect = 1.3e-90
Identity = 190/292 (65.07%), Postives = 217/292 (74.32%), Query Frame = 0
Query: 1 MICLLILIALNFSFLDLSQARHHNNLPSTAAVVGTVFCDTCFQDTFSKSSHFISGATVAV 60
MI LLIL+ LNFSF DLS+ARHH LPS A ++GTVFCDTCFQ+ FSK+SHFISGATVAV
Sbjct: 1 MIWLLILLLLNFSFFDLSEARHHRKLPS-AVIIGTVFCDTCFQEKFSKTSHFISGATVAV 60
Query: 61 ECGDGGSNPSFRDEVKTDKTGEFKIQLPV----SVRKIEECYVRLIRSSEPYCAVAARAK 120
ECG+ G PSFR+EVKTDK GEFK+ LPV V KIEECYV I+SSEPYC VAA AK
Sbjct: 61 ECGNRGRKPSFREEVKTDKRGEFKVNLPVLVSKHVEKIEECYVESIKSSEPYCDVAATAK 120
Query: 121 SSSLKLKSRKQGTHVFSAGFFTFKPLKHPKLCSHN-SHSSEFDDTKQVV--------DFP 180
SSSL+LKS+KQ TH FSAGFFTFKPLK P LC+ + + FDD K+++ D P
Sbjct: 121 SSSLQLKSKKQNTHTFSAGFFTFKPLKQPNLCNQKPQNPNTFDDMKEIIQLPPPPPFDSP 180
Query: 181 GLPAPIQNPTVPNVPRIYDNLPPLTLLPG------LPPLPQLPPLPPLPPLPVFPLFPPK 240
LP+PIQNPTVPN PRIYDNLPPL LLPG LPPLP LPPLPPLPPLP FP+FPPK
Sbjct: 181 NLPSPIQNPTVPNAPRIYDNLPPLPLLPGLLPLPPLPPLPPLPPLPPLPPLPKFPIFPPK 240
Query: 241 KDDEN---VQTPKISQNPDMFHPQTLLPIPSLKPL-RPH-FVMPPHKLRHHP 269
+DE ++TP S+ D F PIP +KPL RPH FV+PP +L HHP
Sbjct: 241 ANDEKNAPIETPNTSEKLDKF------PIPPIKPLRRPHYFVLPPQRLHHHP 285
BLAST of CmoCh04G029450 vs. ExPASy TrEMBL
Match:
A0A0A0KXM2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G642130 PE=4 SV=1)
HSP 1 Score: 337.0 bits (863), Expect = 9.0e-89
Identity = 189/291 (64.95%), Postives = 216/291 (74.23%), Query Frame = 0
Query: 1 MICLLILIALNFSFLDLSQARHHNNLPSTAAVVGTVFCDTCFQDTFSKSSHFISGATVAV 60
M LLIL+ LNFSF DLS+ARHH LPS A VVGTVFCDTC+Q+ FSK+SHFISGATVAV
Sbjct: 1 MSWLLILLLLNFSFFDLSEARHHRKLPS-AVVVGTVFCDTCYQEKFSKTSHFISGATVAV 60
Query: 61 ECGDGGSNPSFRDEVKTDKTGEFKIQLPV----SVRKIEECYVRLIRSSEPYCAVAARAK 120
ECG+ G PSFR+EVKTDK GEFK+ LPV V+KIEECYV L++SSEPYC VAA AK
Sbjct: 61 ECGNKGPEPSFREEVKTDKRGEFKVNLPVLVSKHVKKIEECYVELVKSSEPYCDVAATAK 120
Query: 121 SSSLKLKSRKQGTHVFSAGFFTFKPLKHPKLCSHN-SHSSEFDDTKQV-------VDFPG 180
SSSL+LKSRKQ TH FSAGFFTFKPLK P LC+ + + FDD K++ D P
Sbjct: 121 SSSLQLKSRKQNTHTFSAGFFTFKPLKQPNLCNQKPQNPNTFDDMKEIQLPPPPSYDIPN 180
Query: 181 LPAPIQNPTVPNVPRIYDNLPPLTLLPGLPPLPQLPPLPPLPPLPV------FPLFPPK- 240
LP+PIQ PTVP+ PRIYDNLPPL LLPGL PLPQLPPLPPLPPLP FP+FPPK
Sbjct: 181 LPSPIQIPTVPSAPRIYDNLPPLPLLPGLLPLPQLPPLPPLPPLPTLPPLPKFPIFPPKE 240
Query: 241 KDDENV--QTPKISQNPDMFHPQTLLPIPSLKPLRP--HFVMPPHKLRHHP 269
KD++N +TP S+ D F PIP +KPLR HFV+PP +L HHP
Sbjct: 241 KDEKNAPNETPNTSEKLDKF------PIPPIKPLRKPHHFVLPPQRLHHHP 284
BLAST of CmoCh04G029450 vs. NCBI nr
Match:
XP_022962607.1 (amyloid beta A4 precursor protein-binding family B member 1-interacting protein-like [Cucurbita moschata])
HSP 1 Score: 610.1 bits (1572), Expect = 1.1e-170
Identity = 307/313 (98.08%), Postives = 308/313 (98.40%), Query Frame = 0
Query: 1 MICLLILIALNFSFLDLSQARHHNNLPSTAAVVGTVFCDTCFQDTFSKSSHFISGATVAV 60
MICLLILIALNFSFLDLSQARHHNNLPSTAAVVGTVFCDTCFQDTFSKSSHFISGATVAV
Sbjct: 1 MICLLILIALNFSFLDLSQARHHNNLPSTAAVVGTVFCDTCFQDTFSKSSHFISGATVAV 60
Query: 61 ECGDGGSNPSFRDEVKTDKTGEFKIQLPVSVRKIEECYVRLIRSSEPYCAVAARAKSSSL 120
ECGDGGSNPSFRDEVKTDKTGEFKIQLPVSVRKIEECYVRLIRSSEPYCAVAARAKSSSL
Sbjct: 61 ECGDGGSNPSFRDEVKTDKTGEFKIQLPVSVRKIEECYVRLIRSSEPYCAVAARAKSSSL 120
Query: 121 KLKSRKQGTHVFSAGFFTFKPLKHPKLCSHNSHSSEFDDTKQVVDFPGLPAPIQNPTVPN 180
KLKSRKQGTHVFSAGFFTFKPLKHPKLCSHNSHSSEFDDTKQVVDFPGLPAPIQNPTVPN
Sbjct: 121 KLKSRKQGTHVFSAGFFTFKPLKHPKLCSHNSHSSEFDDTKQVVDFPGLPAPIQNPTVPN 180
Query: 181 VPRIYDNLPPLTLLPGLPPLPQLPPLPPLPPLPVFPLFPPKKDDENVQTPKISQNPDMFH 240
VPRIYDNLPPLTLLPGLPPLPQLPPLPPLPPLPVFPLFPPKKDDENVQTPKISQNPDMFH
Sbjct: 181 VPRIYDNLPPLTLLPGLPPLPQLPPLPPLPPLPVFPLFPPKKDDENVQTPKISQNPDMFH 240
Query: 241 PQTLLPIPSLKPLRPHFVMPPHKLRHHPLTHGPFSPSFSTPTPPSAAADELAPSPPLPFS 300
PQTLLPIPSLKPLRPHFVMPPHKLRHHPLTHGPFSPSFSTPTPPSAAADELAPSPPLPFS
Sbjct: 241 PQTLLPIPSLKPLRPHFVMPPHKLRHHPLTHGPFSPSFSTPTPPSAAADELAPSPPLPFS 300
Query: 301 LPPIPRFSVLHPP 314
LPPIPR + P
Sbjct: 301 LPPIPRMPEISSP 313
BLAST of CmoCh04G029450 vs. NCBI nr
Match:
KAG6602543.1 (hypothetical protein SDJN03_07776, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 593.6 bits (1529), Expect = 1.1e-165
Identity = 301/314 (95.86%), Postives = 305/314 (97.13%), Query Frame = 0
Query: 1 MICLLILIALNFSFLDLSQARHHNNLPSTAAVVGTVFCDTCFQDTFSKSSHFISGATVAV 60
MICLLILIALNFSFLDLSQARHHNNLPSTAAVVGTVFCDTCFQDTFSK+SHFISGATVAV
Sbjct: 1 MICLLILIALNFSFLDLSQARHHNNLPSTAAVVGTVFCDTCFQDTFSKTSHFISGATVAV 60
Query: 61 ECGDGGSNPSFRDEVKTDKTGEFKIQLPVSVRKIEECYVRLIRSSEPYCAVAARAKSSSL 120
ECGDGGSNPSFRDEVKTDKTGEFKIQLPVSVRKIEECYVRLIRSSEPYCAVAARAKSSSL
Sbjct: 61 ECGDGGSNPSFRDEVKTDKTGEFKIQLPVSVRKIEECYVRLIRSSEPYCAVAARAKSSSL 120
Query: 121 KLKSRKQGTHVFSAGFFTFKPLKHPKLCSHNSHSSEFDDTKQVVDFPGLPAPIQNPTVPN 180
KLKSRKQGTHVFSAGFFTFKPLKHPKLCSHNSHS+EFDDTKQVV+FPGLPAPIQNPTVPN
Sbjct: 121 KLKSRKQGTHVFSAGFFTFKPLKHPKLCSHNSHSNEFDDTKQVVEFPGLPAPIQNPTVPN 180
Query: 181 VPRIYDNLPPLTLLPGLPPLPQLPPLPPLPPLPVFPLFPPKKDDENVQTPKISQNPDMFH 240
VPRIYDNLPPL LLPGLPPLPQLPPLPPLPPLPVFPLFPPKKDDENVQTPKISQNPDMFH
Sbjct: 181 VPRIYDNLPPLPLLPGLPPLPQLPPLPPLPPLPVFPLFPPKKDDENVQTPKISQNPDMFH 240
Query: 241 PQTLLPIPSLKPLRPHFVMPPHKLRHHPLTHGPFSPSFSTPTPPSAAA-DELAPSPPLPF 300
PQTLLPIPSLKPLRPHFVMPPHKLRHH LTHGPFSPSFSTPTPPSAAA DELAPSPPLPF
Sbjct: 241 PQTLLPIPSLKPLRPHFVMPPHKLRHHLLTHGPFSPSFSTPTPPSAAAGDELAPSPPLPF 300
Query: 301 SLPPIPRFSVLHPP 314
SLPPIP + P
Sbjct: 301 SLPPIPHIPEISSP 314
BLAST of CmoCh04G029450 vs. NCBI nr
Match:
XP_023528636.1 (proline-rich protein 4-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 548.9 bits (1413), Expect = 3.1e-152
Identity = 283/313 (90.42%), Postives = 289/313 (92.33%), Query Frame = 0
Query: 1 MICLLILIALNFSFLDLSQARHHNNLPSTAAVVGTVFCDTCFQDTFSKSSHFISGATVAV 60
MICLLILIALNFS LDLSQARHHNNLPS AAVVGTVFCDTCFQDTFSK+SHFISGATVAV
Sbjct: 1 MICLLILIALNFSLLDLSQARHHNNLPS-AAVVGTVFCDTCFQDTFSKTSHFISGATVAV 60
Query: 61 ECGDGGSNPSFRDEVKTDKTGEFKIQLPVSVRKIEECYVRLIRSSEPYCAVAARAKSSSL 120
ECG+GGSNPSFRDEVKTDKTGEFKIQLPVSVRKIEECYVRLIRSSEPYCAVAARAKSSSL
Sbjct: 61 ECGNGGSNPSFRDEVKTDKTGEFKIQLPVSVRKIEECYVRLIRSSEPYCAVAARAKSSSL 120
Query: 121 KLKSRKQGTHVFSAGFFTFKPLKHPKLCSHNSHSSEFDDTKQVVDFPGLPAPIQNPTVPN 180
KLKSRKQG HVFSAGFFTFKPLK PKLCSHNSH +EFDDTKQVVDFPGLPAPIQNPTVPN
Sbjct: 121 KLKSRKQGMHVFSAGFFTFKPLKQPKLCSHNSHFNEFDDTKQVVDFPGLPAPIQNPTVPN 180
Query: 181 VPRIYDNLPPLTLLPGLPPLPQLPPLPPLPPLPVFPLFPPKKDDENVQTPKISQNPDMFH 240
VPRIYDNLPPL LLPGLPPLPQLPPLPPLPPLPVFPLFPPKKDDENVQTPKISQNPD+FH
Sbjct: 181 VPRIYDNLPPLPLLPGLPPLPQLPPLPPLPPLPVFPLFPPKKDDENVQTPKISQNPDLFH 240
Query: 241 PQTLLPIPSLKPLRPHFVMPPHKLRHHPLTHGPFSPSFSTPTPPSAAADELAPSPPLPFS 300
PQTLLPIPSLKP RPHFVMPPHKLRHHPLTHGP TP +AAA ELAPSPPLPFS
Sbjct: 241 PQTLLPIPSLKPFRPHFVMPPHKLRHHPLTHGP------TPPSAAAAAGELAPSPPLPFS 300
Query: 301 LPPIPRFSVLHPP 314
LP IP + P
Sbjct: 301 LPSIPNMPEISSP 306
BLAST of CmoCh04G029450 vs. NCBI nr
Match:
XP_022990149.1 (amyloid beta A4 precursor protein-binding family B member 1-interacting protein-like [Cucurbita maxima])
HSP 1 Score: 547.0 bits (1408), Expect = 1.2e-151
Identity = 277/305 (90.82%), Postives = 290/305 (95.08%), Query Frame = 0
Query: 1 MICLLILIALNFSFLDLSQARHHNNLPS-TAAVVGTVFCDTCFQDTFSKSSHFISGATVA 60
MICLLILIALNFSFLDLSQARHHNNLPS AAVVGTVFCDTCFQDTFSK+SHFISGATVA
Sbjct: 1 MICLLILIALNFSFLDLSQARHHNNLPSAAAAVVGTVFCDTCFQDTFSKTSHFISGATVA 60
Query: 61 VECGDGGSNPSFRDEVKTDKTGEFKIQLPVSVRKIEECYVRLIRSSEPYCAVAARAKSSS 120
VECG+ GSNP+FR+EVKTDKTGEFKIQLPVSVRK+EECYVRLIRSSEPYCAVAARAKSSS
Sbjct: 61 VECGNEGSNPNFREEVKTDKTGEFKIQLPVSVRKVEECYVRLIRSSEPYCAVAARAKSSS 120
Query: 121 LKLKSRKQGTHVFSAGFFTFKPLKHPKLCSHNSHSSEFDDTKQVVDFPGLPAPIQNPTVP 180
L+LKS+KQGTHVFSAGFFTFKPLK PKLCSHNSHS+EFDDTKQVVDFPGLPAPIQNPTVP
Sbjct: 121 LRLKSKKQGTHVFSAGFFTFKPLKQPKLCSHNSHSNEFDDTKQVVDFPGLPAPIQNPTVP 180
Query: 181 NVPRIYDNLPPLTLLPGLPPLPQLPPLPPLPPLPVFPLFPPKKDDENVQTPKISQNPDMF 240
NVPRIYDNLPPL LLPGLPPLPQLPPLPPLPPLP+FPLFPPKKDDENVQTPKISQNPD+F
Sbjct: 181 NVPRIYDNLPPLPLLPGLPPLPQLPPLPPLPPLPIFPLFPPKKDDENVQTPKISQNPDLF 240
Query: 241 HPQTLLPIPSLKPLRPHFVMPPHKLRHHPLTHGPFSPSFSTPTPPSAAADELAPSPPLPF 300
HPQTLLPIPSLKPLRPHFVMPPHKLRHHPLTHGP P+ + +AA ELAPSPPLPF
Sbjct: 241 HPQTLLPIPSLKPLRPHFVMPPHKLRHHPLTHGPTPPTAAALA--AAAGGELAPSPPLPF 300
Query: 301 SLPPI 305
SLPPI
Sbjct: 301 SLPPI 303
BLAST of CmoCh04G029450 vs. NCBI nr
Match:
KAG7033221.1 (hypothetical protein SDJN02_07275 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 433.7 bits (1114), Expect = 1.5e-117
Identity = 218/222 (98.20%), Postives = 220/222 (99.10%), Query Frame = 0
Query: 1 MICLLILIALNFSFLDLSQARHHNNLPSTAAVVGTVFCDTCFQDTFSKSSHFISGATVAV 60
MICLLILIALNFSFLDLSQARHHNNLPSTAAVVGTVFCDTCFQDTFSK+SHFISGATVAV
Sbjct: 1 MICLLILIALNFSFLDLSQARHHNNLPSTAAVVGTVFCDTCFQDTFSKTSHFISGATVAV 60
Query: 61 ECGDGGSNPSFRDEVKTDKTGEFKIQLPVSVRKIEECYVRLIRSSEPYCAVAARAKSSSL 120
ECGDGG NPSFRDEVKTDKTGEFKIQLPVSVRKIEECYVRLIRSSEPYCAVAARAKSSSL
Sbjct: 61 ECGDGGWNPSFRDEVKTDKTGEFKIQLPVSVRKIEECYVRLIRSSEPYCAVAARAKSSSL 120
Query: 121 KLKSRKQGTHVFSAGFFTFKPLKHPKLCSHNSHSSEFDDTKQVVDFPGLPAPIQNPTVPN 180
KLKSRKQGTHVFSAGFFTFKPLKHPKLCSHNSHS+EFDDTKQVVDFPGLPAPIQNPTVPN
Sbjct: 121 KLKSRKQGTHVFSAGFFTFKPLKHPKLCSHNSHSNEFDDTKQVVDFPGLPAPIQNPTVPN 180
Query: 181 VPRIYDNLPPLTLLPGLPPLPQLPPLPPLPPLPVFPLFPPKK 223
VPRIYDNLPPL LLPGLPPLPQLPPLPPLPPLPVFPLFPPKK
Sbjct: 181 VPRIYDNLPPLPLLPGLPPLPQLPPLPPLPPLPVFPLFPPKK 222
BLAST of CmoCh04G029450 vs. TAIR 10
Match:
AT5G15780.1 (Pollen Ole e 1 allergen and extensin family protein )
HSP 1 Score: 190.7 bits (483), Expect = 2.0e-48
Identity = 153/343 (44.61%), Postives = 186/343 (54.23%), Query Frame = 0
Query: 17 LSQARHH--NNLPSTAAVVGTVFCDTCFQDTFSKS-SHFISGATVAVECGDGGSNPSFRD 76
LSQ + H S+A VVGTV+CDTCF FSKS +H ISGA VAVEC D S PSFR
Sbjct: 25 LSQGQQHVMKKTRSSAVVVGTVYCDTCFNGAFSKSPNHLISGALVAVECIDENSKPSFRQ 84
Query: 77 EVKTDKTGEFKIQLPVS----VRKIEECYVRLIRSSEPYCAVAARAKSSSLK-LKSRKQG 136
EVKTDK GEFK++LP S V+KI+ C V+L+ SS+PYC++A+ A SSSLK LKS G
Sbjct: 85 EVKTDKRGEFKVKLPFSVSKHVKKIKRCSVKLLSSSQPYCSIASSATSSSLKRLKSNHHG 144
Query: 137 --THVFSAGFFTFKPLKHPKLCSHNSHSSEFDDTKQVVDFPGLPAPIQNPTVPNVPRIYD 196
T VFSAGFFTF+P P++CS +K ++ P P P+Q+P P+
Sbjct: 145 ENTRVFSAGFFTFRPENQPEICSQK--PINLRGSKPLLPDPSFPPPLQDPPNPS------ 204
Query: 197 NLPPLTLLPGLPPLPQLP----PLPPLPPLPVFPLFPP----------KKDDENVQTPKI 256
PL LP +PPLP LP P+P LP V PL PP KK D
Sbjct: 205 ---PLPNLPIVPPLPNLPVPKLPVPDLPLPLVPPLLPPGPQKSASLHNKKSDSLKDKKTE 264
Query: 257 SQNPDMFHPQTLLPIPSLKPLRPHF-VMPPHKLRHHPLTHGPFS--PSFSTPTPPSAAAD 316
+ P+ F P L PS+ P P +P L +PL P S P PTPP+
Sbjct: 265 ALKPNFFFPPNPLNPPSIIPPNPLIPSIPTPTLPPNPLIPSPPSLPPIPLIPTPPTLPTI 324
Query: 317 ELAPSPPLPFSLPPIPRFSVLHP-PTHPPTEDRIFFRSSLLPP 332
L P+PP P +LPPIP L P P PP I SL PP
Sbjct: 325 PLLPTPPTP-TLPPIPTIPTLPPLPVLPPVP--IVNPPSLPPP 353
BLAST of CmoCh04G029450 vs. TAIR 10
Match:
AT5G13140.1 (Pollen Ole e 1 allergen and extensin family protein )
HSP 1 Score: 60.5 bits (145), Expect = 3.1e-09
Identity = 64/246 (26.02%), Postives = 105/246 (42.68%), Query Frame = 0
Query: 28 STAAVVGTVFCDTCFQDTFSKSSHFISGATVAVECGDGGSNPSFRDEVK------TDKTG 87
S VVG V+CDTC +TFS+ S+F+ G V V C S+P +EV T+++G
Sbjct: 37 SRITVVGVVYCDTCSINTFSRQSYFLQGVEVHVTCRFKASSPKTAEEVNISVNRTTNRSG 96
Query: 88 EFKIQLP--------VSVRKIEECYVRLIRSSEP---YCAVAA-RAKSSSLKLKSRKQGT 147
+K+++P + +C +++++S C++ + ++ + +KS++
Sbjct: 97 VYKLEIPHVDGIDCVDGIAISSQCSAKILKTSSDDNGGCSIPVFQTATNEVSIKSKQDRV 156
Query: 148 HVFSAGFFTFK-PLKHPKLCSHNSHSSEFDDTKQVVDFPGLPAPIQNPTVPNVPRIYDNL 207
++S ++K P K+ LC + D K F R
Sbjct: 157 CIYSLSALSYKPPHKNTSLCGNGGKKHHRKDEKVEKKF----------------RDSKFF 216
Query: 208 PPLTLLPGLP-PLPQLPPLPPLPPLPVFPLFPPKKDDENVQTPKISQNPDMFHPQTLLP- 253
P P P P LPPLP LPP P FP + N+ P D +P T +P
Sbjct: 217 WPYLAPYWFPWPYPDLPPLPTLPPFPSFPFPSLPFGNPNLALPAF----DWKNPVTWIPY 262
BLAST of CmoCh04G029450 vs. TAIR 10
Match:
AT2G16630.1 (Pollen Ole e 1 allergen and extensin family protein )
HSP 1 Score: 45.1 bits (105), Expect = 1.4e-04
Identity = 62/227 (27.31%), Postives = 94/227 (41.41%), Query Frame = 0
Query: 24 NNLPSTAAVVGTVFCDTCFQDTFSKSSHFISGATVAVECGDGGSNPSFRDEVKTDKTGEF 83
N + A V G+VFCD C S +SG ++V C D E T+ G +
Sbjct: 22 NGVTGYATVTGSVFCDQCKDGERSLFDFPVSGIKISVTCADENGQVYMSREETTNWLGGY 81
Query: 84 KIQLPVSVRKIEECYVRL----IRSSEPYCAVAARAKSSSLKLKSRKQGTHVFSAGFFTF 143
++ + CY ++ ++ C++A+ + LKL G F+A
Sbjct: 82 VMRFD-GTPDLSNCYAQVSDNGVQQDPSSCSIAS-GPAQKLKLMFSFFGIETFAADALLA 141
Query: 144 KPLKHPKLCSHNSHSSEFDDTKQVVDFPGLPA--PIQNPTVPN--VPRIYDNLPPLTLLP 203
+P++ C T V+ P +P P Q P P+ VP I + PP TL P
Sbjct: 142 QPVQPSSFCPK-------PPTAPVMPPPQVPVMPPPQVPVKPHPKVPVISPD-PPATLPP 201
Query: 204 GLPPLPQLPPLPP--LPPLPVFPL--FPPKKDDENVQTPKISQNPDM 239
P +P + P PP LPP P+ P+ PP + P + Q P M
Sbjct: 202 --PKVPVISPDPPTTLPP-PLVPVINLPPVTSPPQFKLPPLPQIPPM 235
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1HD47 | 5.5e-171 | 98.08 | amyloid beta A4 precursor protein-binding family B member 1-interacting protein-... | [more] |
A0A6J1JRA2 | 5.7e-152 | 90.82 | amyloid beta A4 precursor protein-binding family B member 1-interacting protein-... | [more] |
A0A6J1BYU3 | 1.5e-91 | 62.27 | proline-rich protein 4-like OS=Momordica charantia OX=3673 GN=LOC111006489 PE=4 ... | [more] |
A0A5A7T850 | 1.3e-90 | 65.07 | Major pollen allergen Lol p 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
A0A0A0KXM2 | 9.0e-89 | 64.95 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G642130 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_022962607.1 | 1.1e-170 | 98.08 | amyloid beta A4 precursor protein-binding family B member 1-interacting protein-... | [more] |
KAG6602543.1 | 1.1e-165 | 95.86 | hypothetical protein SDJN03_07776, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023528636.1 | 3.1e-152 | 90.42 | proline-rich protein 4-like [Cucurbita pepo subsp. pepo] | [more] |
XP_022990149.1 | 1.2e-151 | 90.82 | amyloid beta A4 precursor protein-binding family B member 1-interacting protein-... | [more] |
KAG7033221.1 | 1.5e-117 | 98.20 | hypothetical protein SDJN02_07275 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
Match Name | E-value | Identity | Description | |
AT5G15780.1 | 2.0e-48 | 44.61 | Pollen Ole e 1 allergen and extensin family protein | [more] |
AT5G13140.1 | 3.1e-09 | 26.02 | Pollen Ole e 1 allergen and extensin family protein | [more] |
AT2G16630.1 | 1.4e-04 | 27.31 | Pollen Ole e 1 allergen and extensin family protein | [more] |