CmoCh04G020940 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G020940
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	basic form of pathogenesis-related protein 1-like
Location	Cmo_Chr04: 12950807 .. 12951151 (-)
RNA-Seq Expression	CmoCh04G020940
Synteny	CmoCh04G020940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCTTTCATGTTCCTCCTCGCCCTAACCAATGCTCAAAACACCCCTGGTGACTATCTCGCGCTTCACAACCGCGCTCGAGCCCAGGTCGGCGTCGGCCTCATGCAATGGAGCAATACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCGCTGGGTACTACCCTGAGTTCACTGTGGTGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCCGTTGTATGATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGTGA

mRNA sequence

ATGGCCGCTTTCATGTTCCTCCTCGCCCTAACCAATGCTCAAAACACCCCTGGTGACTATCTCGCGCTTCACAACCGCGCTCGAGCCCAGGTCGGCGTCGGCCTCATGCAATGGAGCAATACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCGCTGGGTACTACCCTGAGTTCACTGTGGTGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCCGTTGTATGATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGTGA

Coding sequence (CDS)

ATGGCCGCTTTCATGTTCCTCCTCGCCCTAACCAATGCTCAAAACACCCCTGGTGACTATCTCGCGCTTCACAACCGCGCTCGAGCCCAGGTCGGCGTCGGCCTCATGCAATGGAGCAATACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCGCTGGGTACTACCCTGAGTTCACTGTGGTGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCCGTTGTATGATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGTGA

Protein sequence

MAAFMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW

Homology

[Close]

BLAST of CmoCh04G020940 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 9.1e-35
Identity = 67/111 (60.36%), Postives = 79/111 (71.17%), Query Frame = 0


Query: 4   FMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHST 63
           F  L+  + AQN+P DYL  HN AR QVGVG M W N +AAYAQ YA +R GDC MIHS 
Sbjct: 14  FAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSH 73

Query: 64  GPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           GPYGEN+AA  +P+     AVK+W +EK  YD+ SN CVGG CGHYTQ+VW
Sbjct: 74  GPYGENLAAA-FPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVW 123

[Close]

BLAST of CmoCh04G020940 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.8e-28
Identity = 58/108 (53.70%), Postives = 79/108 (73.15%), Query Frame = 0


Query: 7   LLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPY 66
           L+  + AQ++P DYL +HN+AR  VGVG MQW   VAAYA++YAE+ +G+C +IHS GPY
Sbjct: 20  LVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPY 79

Query: 67  GENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           GEN+A G   + + V AV +W +EK  Y++A+N C  G CGHYTQ+VW
Sbjct: 80  GENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVW 125

[Close]

BLAST of CmoCh04G020940 vs. ExPASy Swiss-Prot
Match: Q04108 (Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.1e-27
Identity = 60/103 (58.25%), Postives = 76/103 (73.79%), Query Frame = 0


Query: 13  AQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAA 72
           AQN+P DYLA+HN ARAQVGVG M W   +A+ AQ YA  R GDC +IHS    GEN+A 
Sbjct: 24  AQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGA--GENLAK 83

Query: 73  GYYPEFTVVDAVKLWANEKPLYDHASNKCVGGE-CGHYTQMVW 115
           G   +FT   AV+LW +E+P Y++A+N+CVGG+ CGHYTQ+VW
Sbjct: 84  G-GGDFTGRAAVQLWVSERPDYNYATNQCVGGKMCGHYTQVVW 123

[Close]

BLAST of CmoCh04G020940 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 5.3e-27
Identity = 56/105 (53.33%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 11  TNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENI 70
           + AQ    ++L  HN AR +VGVG M W + +AAYAQ YA +R  DC MIHS GPYGEN+
Sbjct: 19  SQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHSDGPYGENL 78

Query: 71  AAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGE-CGHYTQMVW 115
           AA  +P+     AVK+W +EK  YD+ SN C  G+ CGHYTQ+VW
Sbjct: 79  AAA-FPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVW 122

[Close]

BLAST of CmoCh04G020940 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.0e-27
Identity = 56/112 (50.00%), Postives = 71/112 (63.39%), Query Frame = 0


Query: 4   FMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHST 63
           F+ +   ++AQN+  DYL  HN ARA VGV  + W N VAAYAQ Y  +   DC ++HS 
Sbjct: 21  FLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAADCNLVHSH 80

Query: 64  GPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGE-CGHYTQMVW 115
           G YGEN+A G     T   AV++W +EK  YDH SN C  G+ CGHYTQ+VW
Sbjct: 81  GQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVW 132

[Close]

BLAST of CmoCh04G020940 vs. ExPASy TrEMBL
Match: A0A6J1H3C4 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460023 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 3.6e-58
Identity = 108/114 (94.74%), Postives = 108/114 (94.74%), Query Frame = 0


Query: 1   MAAFMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMI 60
           MA FMFLLALTNAQN PGDYLALHNRARAQV VG MQWSNTVAAYAQAYAEKRKGDCAMI
Sbjct: 13  MATFMFLLALTNAQNAPGDYLALHNRARAQVSVGRMQWSNTVAAYAQAYAEKRKGDCAMI 72

Query: 61  HSTGPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           HSTGPYGENIAAGYYPEFT VDAVKLWANEKP YDHASNKCVGGECGHYTQMVW
Sbjct: 73  HSTGPYGENIAAGYYPEFTGVDAVKLWANEKPFYDHASNKCVGGECGHYTQMVW 126

[Close]

BLAST of CmoCh04G020940 vs. ExPASy TrEMBL
Match: A0A6J1EQL1 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436565 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 7.9e-58
Identity = 107/114 (93.86%), Postives = 108/114 (94.74%), Query Frame = 0


Query: 1   MAAFMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMI 60
           MA F+FLLALTNAQN PGDYLALHNRARAQVGVG MQWSNTVA YAQAYAEKRKGDCAMI
Sbjct: 1   MATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAVYAQAYAEKRKGDCAMI 60

Query: 61  HSTGPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           HSTGPYGENIAAGYYPEFT  DAVKLWANEKPLYDHASNKCVGGECGHYTQMVW
Sbjct: 61  HSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 114

[Close]

BLAST of CmoCh04G020940 vs. ExPASy TrEMBL
Match: A0A6J1EQJ7 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436551 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.3e-57
Identity = 106/114 (92.98%), Postives = 108/114 (94.74%), Query Frame = 0


Query: 1   MAAFMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMI 60
           +A F+FLLALTNAQN PGDYL LHNRARAQVGVG MQWSNTVAAYAQAYAEKRKGDCAMI
Sbjct: 13  IATFIFLLALTNAQNAPGDYLVLHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMI 72

Query: 61  HSTGPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           HSTGPYGENIAAGYYPEFT  DAVKLWANEKPLYDHASNKCVGGECGHYTQMVW
Sbjct: 73  HSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 126

[Close]

BLAST of CmoCh04G020940 vs. ExPASy TrEMBL
Match: A0A6J1H3H8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460070 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 6.7e-57
Identity = 105/114 (92.11%), Postives = 108/114 (94.74%), Query Frame = 0


Query: 1   MAAFMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMI 60
           +A F+FLLALTNAQN PGDYLALHNRARAQVGVG MQWSNTVAAYAQAYA+KRKGDCAMI
Sbjct: 44  IATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCAMI 103

Query: 61  HSTGPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           HSTGPYGENIAAGYYPEFT  DAVKLW NEKPLYDHASNKCVGGECGHYTQMVW
Sbjct: 104 HSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHASNKCVGGECGHYTQMVW 157

[Close]

BLAST of CmoCh04G020940 vs. ExPASy TrEMBL
Match: A0A6J1EU05 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436564 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 6.7e-57
Identity = 105/114 (92.11%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 1   MAAFMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMI 60
           MA F+FLL LTNAQN PGDY ALHNRARAQVGVG MQWSNTVAAY QAYAEKRKGDCAMI
Sbjct: 1   MATFIFLLTLTNAQNAPGDYFALHNRARAQVGVGPMQWSNTVAAYTQAYAEKRKGDCAMI 60

Query: 61  HSTGPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           HSTGPYGENIAAGYYPEFT  DAVKLWANEKPLYDHASNKCVGGECGHYTQMVW
Sbjct: 61  HSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 114

[Close]

BLAST of CmoCh04G020940 vs. NCBI nr
Match: XP_022958871.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 233.8 bits (595), Expect = 7.4e-58
Identity = 108/114 (94.74%), Postives = 108/114 (94.74%), Query Frame = 0


Query: 1   MAAFMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMI 60
           MA FMFLLALTNAQN PGDYLALHNRARAQV VG MQWSNTVAAYAQAYAEKRKGDCAMI
Sbjct: 13  MATFMFLLALTNAQNAPGDYLALHNRARAQVSVGRMQWSNTVAAYAQAYAEKRKGDCAMI 72

Query: 61  HSTGPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           HSTGPYGENIAAGYYPEFT VDAVKLWANEKP YDHASNKCVGGECGHYTQMVW
Sbjct: 73  HSTGPYGENIAAGYYPEFTGVDAVKLWANEKPFYDHASNKCVGGECGHYTQMVW 126

[Close]

BLAST of CmoCh04G020940 vs. NCBI nr
Match: XP_022930079.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_022930080.1 basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 232.6 bits (592), Expect = 1.6e-57
Identity = 107/114 (93.86%), Postives = 108/114 (94.74%), Query Frame = 0


Query: 1   MAAFMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMI 60
           MA F+FLLALTNAQN PGDYLALHNRARAQVGVG MQWSNTVA YAQAYAEKRKGDCAMI
Sbjct: 1   MATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAVYAQAYAEKRKGDCAMI 60

Query: 61  HSTGPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           HSTGPYGENIAAGYYPEFT  DAVKLWANEKPLYDHASNKCVGGECGHYTQMVW
Sbjct: 61  HSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 114

[Close]

BLAST of CmoCh04G020940 vs. NCBI nr
Match: XP_023522018.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231.1 bits (588), Expect = 4.8e-57
Identity = 106/114 (92.98%), Postives = 107/114 (93.86%), Query Frame = 0


Query: 1   MAAFMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMI 60
           MA F+FLL LTNAQN PGDYLALHNRARAQVGVG MQWSNTVA YAQAYAEKRKGDCAMI
Sbjct: 13  MATFIFLLVLTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAVYAQAYAEKRKGDCAMI 72

Query: 61  HSTGPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           HSTGPYGENIAAGYYPEFT  DAVKLWANEKPLYDHASNKCVGGECGHYTQMVW
Sbjct: 73  HSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 126

[Close]

BLAST of CmoCh04G020940 vs. NCBI nr
Match: XP_022930064.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_022930070.1 basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_022954130.1 basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 231.1 bits (588), Expect = 4.8e-57
Identity = 106/114 (92.98%), Postives = 108/114 (94.74%), Query Frame = 0


Query: 1   MAAFMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMI 60
           +A F+FLLALTNAQN PGDYL LHNRARAQVGVG MQWSNTVAAYAQAYAEKRKGDCAMI
Sbjct: 13  IATFIFLLALTNAQNAPGDYLVLHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMI 72

Query: 61  HSTGPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           HSTGPYGENIAAGYYPEFT  DAVKLWANEKPLYDHASNKCVGGECGHYTQMVW
Sbjct: 73  HSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 126

[Close]

BLAST of CmoCh04G020940 vs. NCBI nr
Match: XP_023538339.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 230.7 bits (587), Expect = 6.2e-57
Identity = 107/114 (93.86%), Postives = 108/114 (94.74%), Query Frame = 0


Query: 1   MAAFMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMI 60
           MA FMFLLALTNAQN PGDYLALHNRARAQVGVG MQW+NTVAAYAQAYAEKRKGDCAMI
Sbjct: 9   MATFMFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWNNTVAAYAQAYAEKRKGDCAMI 68

Query: 61  HSTGPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           HSTG YGENIAAGYYPEFT  DAVKLWANEKPLYDHASNKCVGGECGHYTQMVW
Sbjct: 69  HSTGLYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 122

[Close]

BLAST of CmoCh04G020940 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 142.1 bits (357), Expect = 2.7e-34
Identity = 65/115 (56.52%), Postives = 79/115 (68.70%), Query Frame = 0


Query: 1   MAAFMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMI 60
           + A  FL+  TNAQNTP DYL  HN ARAQVGV  + W  T+AAYA  Y+  RK DC ++
Sbjct: 11  IVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLV 70

Query: 61  HSTGPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGG-ECGHYTQMVW 115
           HS GPYGEN+A G    F+ + AVKLW +EKP Y +A N C GG +C HYTQ+VW
Sbjct: 71  HSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVW 125

[Close]

BLAST of CmoCh04G020940 vs. TAIR 10
Match: AT1G50050.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 125.9 bits (315), Expect = 2.0e-29
Identity = 63/116 (54.31%), Postives = 75/116 (64.66%), Query Frame = 0


Query: 1   MAAFMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMI 60
           + A  FL+  TNAQN   DYL  HN ARAQVGV  + W   VAAYA  YA  RK DC++ 
Sbjct: 11  IVAISFLVLATNAQNAQQDYLNTHNTARAQVGVANVVWDTVVAAYATNYANARKVDCSLT 70

Query: 61  HST-GPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGG-ECGHYTQMVW 115
            ST G YGEN+A G    FT V AV LW NEKP Y++ +N C+G  +C HYTQ+VW
Sbjct: 71  PSTGGSYGENLANGNNALFTGVAAVNLWVNEKPYYNYTANACIGAQQCKHYTQVVW 126

[Close]

BLAST of CmoCh04G020940 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 125.9 bits (315), Expect = 2.0e-29
Identity = 58/108 (53.70%), Postives = 79/108 (73.15%), Query Frame = 0


Query: 7   LLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPY 66
           L+  + AQ++P DYL +HN+AR  VGVG MQW   VAAYA++YAE+ +G+C +IHS GPY
Sbjct: 20  LVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPY 79

Query: 67  GENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           GEN+A G   + + V AV +W +EK  Y++A+N C  G CGHYTQ+VW
Sbjct: 80  GENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVW 125

[Close]

BLAST of CmoCh04G020940 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 125.2 bits (313), Expect = 3.4e-29
Identity = 61/112 (54.46%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 4   FMFLLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHST 63
           F+ L+    AQ++P D+LA+HNRARA+VGVG ++W   VAAYA+ YA +RKGDCAM HS+
Sbjct: 17  FLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSS 76

Query: 64  GPYGENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCV-GGECGHYTQMVW 115
           G YGENIA       T V AV +W +E+  YD+ SN C    +CGHYTQ+VW
Sbjct: 77  GSYGENIAWS-SGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVW 127

[Close]

BLAST of CmoCh04G020940 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 118.6 bits (296), Expect = 3.2e-27
Identity = 55/108 (50.93%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 7   LLALTNAQNTPGDYLALHNRARAQVGVGLMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPY 66
           L+    AQ++  DY+  HN+AR+Q+GVG MQW   +AAYA+ YA + KGDC ++HS GPY
Sbjct: 20  LVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPY 79

Query: 67  GENIAAGYYPEFTVVDAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 115
           GEN+A     + + V AV LW NEK  Y++ +N C  G CGHYTQ+VW
Sbjct: 80  GENLAKS-GGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQVVW 125

The following BLAST results are available for this feature:

BLAST of CmoCh04G020940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	9.1e-35	60.36	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
P33154	2.8e-28	53.70	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1...	[more]
Q04108	4.1e-27	58.25	Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
Q08697	5.3e-27	53.33	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P07053	7.0e-27	50.00	Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]

BLAST of CmoCh04G020940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3C4	3.6e-58	94.74	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1EQL1	7.9e-58	93.86	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1EQJ7	2.3e-57	92.98	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1H3H8	6.7e-57	92.11	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1EU05	6.7e-57	92.11	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of CmoCh04G020940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958871.1	7.4e-58	94.74	basic form of pathogenesis-related protein 1-like [Cucurbita moschata]	[more]
XP_022930079.1	1.6e-57	93.86	basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_02293...	[more]
XP_023522018.1	4.8e-57	92.98	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022930064.1	4.8e-57	92.98	basic form of pathogenesis-related protein 1-like [Cucurbita moschata] >XP_02293...	[more]
XP_023538339.1	6.2e-57	93.86	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh04G020940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50060.1	2.7e-34	56.52	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT1G50050.1	2.0e-29	54.31	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14610.1	2.0e-29	53.70	pathogenesis-related gene 1	[more]
AT4G33720.1	3.4e-29	54.46	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14580.1	3.2e-27	50.93	basic pathogenesis-related protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002413	Venom allergen 5-like	PRINTS	PR00838	V5ALLERGEN	coord: 81..96 score: 33.2 coord: 36..54 score: 27.63 coord: 105..114 score: 38.44
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 83..96 score: 38.5 coord: 36..54 score: 36.79 coord: 106..114 score: 41.92
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 11..114
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 15..114 e-value: 1.6E-22 score: 90.9
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 21..114 e-value: 9.2E-15 score: 55.6
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 16..114 e-value: 6.2E-26 score: 93.4
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 10..114
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 11..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G020940.1	CmoCh04G020940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane