CmoCh04G007690 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G007690
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Description2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
LocationCmo_Chr04: 3851652 .. 3854634 (+)
RNA-Seq ExpressionCmoCh04G007690
SyntenyCmoCh04G007690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCATGCCCACCCCCAAGCGGCTCGGTTCCTACGCACCCTTTTCTCCGCCACCAACACAAGTCAACCACACAACCCACTCCACTCACCTCTTCGCTTACCCTTTCCATGGCTGTCCCCTTCCCGGTCTTCGCTTCTGCCACCACCGCCACAACCTCCCACCAATCCCTTTCTCTTTCCGTCTACCCCCGCTCCTTCCCCAGAACAAATTTCAATGTTGTTTCCTCCTCCTCTTCGCGCCCTTCCATCCGTGTGAATTCTGCCGCTTCTCCCTCTGTGGAGGCGGCCACCGCCGTCGACTCTGATCGGGCTGCCGCCTCAGATTCTCGGTCTAAAGCCTTGCCGTTTCGGATTGGACATGGGTTCGATCTCCATAGGTTGGAGCCTGGGTATCCTTTGATTATTGGGGGAATTAATATTCCCCATGACAGAGGCTGCGAGGCTCATTCTGATGGTAATTTCTTTGCTTCTAGTTTGTTTTCCTGTTTCTGTGTACTTGTTGGTTGCTGTTCTGCTGAAGAATTAGGGAATCTTCTTACGAACTTAATTGTTTGTATTCTAATTCTTTAAATAATTAGCTCAATTTAGTTGGTTCCATTCATTTCTTGATTGCAGCAATGACGAATTTCTAAATTTCTACATGGAATGAGGGAATTTTATACCTAAAAACTTTTAAATTTTGAAGTGGTTCTTTGTTTTGTTGATTTAGGGGATGTTCTACTTCACTGTGTGGTTGATGCAATTTTGGGTGCTTTGGGGCTTCCTGATATTGGACAAATCTTTCCAGATTCAGATCCCAAATGGAAGGGTGCCCCTTCATCTGTTTTCATTAAAGAAGCTGTAAGTAGTTCTGGCATACCAAATTCAAACTCACTGCCAAGTTTTGTTATCCTCTTTGCCTTGATTAATTTAAAATGATCTTAGGATTCTCTGGTTGCTTTGCTTTCATACTGGATATTATGATACCTTTATGTTTGCTTGAAGTTCACTTTAGGGGGACTAAAATGACCAATTATAAGAGGATGAAAAGTATAAGAAAGTAGAGCTTTTATTTGAGATTGTAGGGAAAAATGAATGACTTTTAGAGAATATTAATGAATTTCTTCGTTAAAAGAAAGAAAAATTGATGTGAATGTTGTTGGAAGACTGGCTTTGTGAGATCCCACGTTAGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAGACCTCTCCTTAGTAGACGTGTCTTAAAAACCTTGAGGGCAAGCCTGAAAGGGAAAGCCTAAAGAGAACAATATCTGCTACCACCGTTGGGCTTGCACTGTTACAAATGGTATTAGAGCCAGACACCGGTCGATGCGCCAGAGGAAAGCTGAGCCTCGAAGGAGGGTGGACACGAGGCGGTGTGCCAACGAGGAGCTGGGCCCCGAAAGAGGGTGGATTGTGAGATCTCACATCGGTTGGGAGGAGAATGAGACATTCTTTATAAGGGCGTGGAAACCTCTCCCTAGCAGACGTGTTTTAAAAACCTTGAGGAGAAGCCCAAAAGGGAAAACCCAAAGAGAACAATATTTGCTAGCGGTGGGATTGAGCCGTTACAGGCTTGAGGCGTTTAGGCACATGCCTCAAGCTTACTTCATTAAAGGATCCTCACTTTGCGTTTAGGCACATGCCTCAAGCATACTTCATTAAGGGATCCTCACTTCAAAAGTGAGGGGCAGAGAAAGGAAGTTCTACATGAACAGGGGAGCCTAAGAAATTCTTCAAAACCAAAAGGAAGTGCTGAAAGATTTTCCGATTCACATTTGTATCAAAAGAGAAGAAAAGCTGCAAATCTTATAACCTTGGATTTCTCGTTTACTTCCCCCTCCGAAAAATACCATATGTTTCTTTGGGCACTAAATGTATTAGGGTCATGTAGCTGTCTGTCTTGTGTGAAATATTTTGGTGCACGTAAGCTAGCTTGGACACTCATAGGTGCACGTAAGCTAGCTCGGACACTCGCAGATAAAGAAAAGAATGGTGAGGTAAACATCCCTAATGAGTCTCAGGGAAAGGTAATCAATAATGAGAGACCTTTGTTTCACCTGCTTTGTATTTCTTCAATTTTTGTTTAACTATTGATTCATGTGTGCTTAAATATCATCCCAAAGTGAACACATAGAACATTGTAGGGGTATGAATTTTAGACTTTCTCCTCTAATCTCGTATGACCATATTAAAACACCACGGAATTTGAGGCCAATGAATCCATCTAGTAACCCGAAGTCAAAGTAAATAGTTTGAATTCGGTCTATTTTAGACTAAATAATGTTCCATTTTGTGATTGATGAGGATTTTTGGTGTTAATTTTGGGTGATATTCCAGGTGAGACTGATGCATGAGGCAGGTTATGAGATAGGAAACTTGGATGCCACATTGATACTCCAAAGACCAAAGCTTAGCCCTCACAAGGAAGCTATCAGAGCAAACCTCTCCGATCTTCTGGGAGCCGACCAATCTGTCGTGAATCTGAAGGCAAAAACACACGAGAAGGTCGACAGCCTCGGCGAAAACCGAAGCATTGCTGCCCATACGGTGGTCCTCCTAATGAGGAGATAGAACCCCTACCATTACTGCTGCTGCTTTGTTAGTGTAATAGCAACAACACTGCTCCATTTCAAGTGGAATCTGCTTTAGTGTCAATACTTTGAATCTCCCCTCCCTTCCACAGCTAAAACGTTTTAATCATTCAACAACGTTAAAATGAAAATGATATGGTCAAGAACATTAGAAATTGGCTACAATGACTTTTTTTTTTTTTTTCTTCTTCTTCTTCTTGGTGTGTGAAAGATGTAAAGATGAGGTGGAAATTACTCTTTCATTTTGTCAAAAGCCAGTAATCATTAATTATATTTGAGTCGAATTGTGTACAATTTGATCATATTGTAATTATACAATTTGACCATATTGTAATTAACAAAACCAAAGGATGCTATAAAATTAGAGATGTTTACCGG

mRNA sequence

GTCATGCCCACCCCCAAGCGGCTCGGTTCCTACGCACCCTTTTCTCCGCCACCAACACAAGTCAACCACACAACCCACTCCACTCACCTCTTCGCTTACCCTTTCCATGGCTGTCCCCTTCCCGGTCTTCGCTTCTGCCACCACCGCCACAACCTCCCACCAATCCCTTTCTCTTTCCGTCTACCCCCGCTCCTTCCCCAGAACAAATTTCAATGTTGTTTCCTCCTCCTCTTCGCGCCCTTCCATCCGTGTGAATTCTGCCGCTTCTCCCTCTGTGGAGGCGGCCACCGCCGTCGACTCTGATCGGGCTGCCGCCTCAGATTCTCGGTCTAAAGCCTTGCCGTTTCGGATTGGACATGGGTTCGATCTCCATAGGTTGGAGCCTGGGTATCCTTTGATTATTGGGGGAATTAATATTCCCCATGACAGAGGCTGCGAGGCTCATTCTGATGGGGATGTTCTACTTCACTGTGTGGTTGATGCAATTTTGGGTGCTTTGGGGCTTCCTGATATTGGACAAATCTTTCCAGATTCAGATCCCAAATGGAAGGGTGCCCCTTCATCTGTTTTCATTAAAGAAGCTGTGAGACTGATGCATGAGGCAGGTTATGAGATAGGAAACTTGGATGCCACATTGATACTCCAAAGACCAAAGCTTAGCCCTCACAAGGAAGCTATCAGAGCAAACCTCTCCGATCTTCTGGGAGCCGACCAATCTGTCGTGAATCTGAAGGCAAAAACACACGAGAAGGTCGACAGCCTCGGCGAAAACCGAAGCATTGCTGCCCATACGGTGGTCCTCCTAATGAGGAGATAGAACCCCTACCATTACTGCTGCTGCTTTGTTAGTGTAATAGCAACAACACTGCTCCATTTCAAGTGGAATCTGCTTTAGTGTCAATACTTTGAATCTCCCCTCCCTTCCACAGCTAAAACGTTTTAATCATTCAACAACGTTAAAATGAAAATGATATGGTCAAGAACATTAGAAATTGGCTACAATGACTTTTTTTTTTTTTTTCTTCTTCTTCTTCTTGGTGTGTGAAAGATGTAAAGATGAGGTGGAAATTACTCTTTCATTTTGTCAAAAGCCAGTAATCATTAATTATATTTGAGTCGAATTGTGTACAATTTGATCATATTGTAATTATACAATTTGACCATATTGTAATTAACAAAACCAAAGGATGCTATAAAATTAGAGATGTTTACCGG

Coding sequence (CDS)

ATGGCTGTCCCCTTCCCGGTCTTCGCTTCTGCCACCACCGCCACAACCTCCCACCAATCCCTTTCTCTTTCCGTCTACCCCCGCTCCTTCCCCAGAACAAATTTCAATGTTGTTTCCTCCTCCTCTTCGCGCCCTTCCATCCGTGTGAATTCTGCCGCTTCTCCCTCTGTGGAGGCGGCCACCGCCGTCGACTCTGATCGGGCTGCCGCCTCAGATTCTCGGTCTAAAGCCTTGCCGTTTCGGATTGGACATGGGTTCGATCTCCATAGGTTGGAGCCTGGGTATCCTTTGATTATTGGGGGAATTAATATTCCCCATGACAGAGGCTGCGAGGCTCATTCTGATGGGGATGTTCTACTTCACTGTGTGGTTGATGCAATTTTGGGTGCTTTGGGGCTTCCTGATATTGGACAAATCTTTCCAGATTCAGATCCCAAATGGAAGGGTGCCCCTTCATCTGTTTTCATTAAAGAAGCTGTGAGACTGATGCATGAGGCAGGTTATGAGATAGGAAACTTGGATGCCACATTGATACTCCAAAGACCAAAGCTTAGCCCTCACAAGGAAGCTATCAGAGCAAACCTCTCCGATCTTCTGGGAGCCGACCAATCTGTCGTGAATCTGAAGGCAAAAACACACGAGAAGGTCGACAGCCTCGGCGAAAACCGAAGCATTGCTGCCCATACGGTGGTCCTCCTAATGAGGAGATAG

Protein sequence

MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Homology
[Close]
BLAST of CmoCh04G007690 vs. ExPASy Swiss-Prot
Match: Q9CAK8 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ISPF PE=1 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 8.1e-86
Identity = 161/197 (81.73%), Postives = 173/197 (87.82%), Query Frame = 0 

Query: 40  SSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLII 99
           S S RPS  V++A+S       AVD + +  S+  +K LPFRIGHGFDLHRLEPGYPLII
Sbjct: 42  SLSCRPSASVSAASS-------AVDVNESVTSEKPTKTLPFRIGHGFDLHRLEPGYPLII 101

Query: 100 GGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEA 159
           GGI IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGA SSVFIKEA
Sbjct: 102 GGIVIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAASSVFIKEA 161

Query: 160 VRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSL 219
           VRLM EAGYEIGNLDATLILQRPK+SPHKE IR+NLS LLGAD SVVNLKAKTHEKVDSL
Sbjct: 162 VRLMDEAGYEIGNLDATLILQRPKISPHKETIRSNLSKLLGADPSVVNLKAKTHEKVDSL 221

Query: 220 GENRSIAAHTVVLLMRR 237
           GENRSIAAHTV+LLM++
Sbjct: 222 GENRSIAAHTVILLMKK 231

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BLAST of CmoCh04G007690 vs. ExPASy Swiss-Prot
Match: Q6EPN6 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ISPF PE=1 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.3e-83
Identity = 156/200 (78.00%), Postives = 176/200 (88.00%), Query Frame = 0 

Query: 39  SSSSSRPSIRVNSAASPSVEAATAVDSDR--AAASDSRSKALPFRIGHGFDLHRLEPGYP 98
           S+S +RPS+R+     PS  AA AV ++   A A+  +  ALPFR+GHGFDLHRLEPG P
Sbjct: 26  SASPARPSLRLR---RPSTLAAAAVQAEHQPAVAAAPKPPALPFRVGHGFDLHRLEPGLP 85

Query: 99  LIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFI 158
           LIIGGI+IPHDRGC+AHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDP+WKGA SSVF+
Sbjct: 86  LIIGGIDIPHDRGCDAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPRWKGADSSVFM 145

Query: 159 KEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKV 218
           +EAV+LMHEAGYE+GNLDATLILQ+PK+SP KE IR+NL DLLGAD SVVNLKAKTHEKV
Sbjct: 146 REAVKLMHEAGYELGNLDATLILQKPKISPFKETIRSNLCDLLGADPSVVNLKAKTHEKV 205

Query: 219 DSLGENRSIAAHTVVLLMRR 237
           DSLGENRSIAAHTVVLLMR+
Sbjct: 206 DSLGENRSIAAHTVVLLMRK 222

[Close]
BLAST of CmoCh04G007690 vs. ExPASy Swiss-Prot
Match: Q9M4W3 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Catharanthus roseus OX=4058 GN=ISPF PE=2 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 6.4e-83
Identity = 165/233 (70.82%), Postives = 188/233 (80.69%), Query Frame = 0 

Query: 14  ATTSHQSLSLSVYPRSFPRTNF--NVVSSSSSRPS-IRVNSAASPSVE-------AATAV 73
           AT+ + S ++     +  R NF  + V  S + PS IR+++  S ++        +  AV
Sbjct: 4   ATSFYCSTAIPSKKTNQNRENFLCSPVGGSKTTPSYIRLSTRQSRTLSLVVSAAASGAAV 63

Query: 74  DSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCV 133
           +++   A+ + SK L FR+GHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCV
Sbjct: 64  EAEPKFAAVTPSKILSFRVGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCV 123

Query: 134 VDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPK 193
           VDAILGALGLPDIGQIFPD+DPKWKGAPSSVFIKEAVRLM EAGYE+GNLDATLILQRPK
Sbjct: 124 VDAILGALGLPDIGQIFPDTDPKWKGAPSSVFIKEAVRLMDEAGYELGNLDATLILQRPK 183

Query: 194 LSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 237
           +SPHKEAIR NL  LLGAD  VVNLKAKTHEKVDSLGENRSIAAHTVVLLMR+
Sbjct: 184 VSPHKEAIRQNLCQLLGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRK 236

[Close]
BLAST of CmoCh04G007690 vs. ExPASy Swiss-Prot
Match: Q1LLZ4 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34) OX=266264 GN=ispF PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-43
Identity = 85/156 (54.49%), Postives = 110/156 (70.51%), Query Frame = 0 

Query: 81  RIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIF 140
           RIG G+D+H L PG  LI+GG++IPHDRG   HSD D LLH V DA+ GA  L DIG+ F
Sbjct: 7   RIGQGYDVHALVPGRKLILGGVDIPHDRGLLGHSDADALLHAVTDALFGAAALGDIGRHF 66

Query: 141 PDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLG 200
           PD+DP + GA S V ++EAVR + EAGYEIGN+DAT+I Q+PKL+PH   + ANL++ LG
Sbjct: 67  PDTDPNFAGADSRVLLREAVRRVREAGYEIGNVDATVIAQKPKLAPHISGMVANLAEDLG 126

Query: 201 ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 237
              +  N+KAKT+EK+   G+   I A   VL+ RR
Sbjct: 127 LPVTRCNVKAKTNEKLGFEGKEEGIVAQAAVLIYRR 162

[Close]
BLAST of CmoCh04G007690 vs. ExPASy Swiss-Prot
Match: B8GQ78 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) OX=396588 GN=ispF PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.7e-43
Identity = 80/153 (52.29%), Postives = 108/153 (70.59%), Query Frame = 0 

Query: 81  RIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIF 140
           RIGHG+D+H  + G  +++GG+ IPH +   AHSDGDVL+H + DA+LGA  L DIG+ F
Sbjct: 5   RIGHGYDVHAFKAGGHVVLGGVRIPHAKAFAAHSDGDVLIHALCDALLGAAALGDIGRHF 64

Query: 141 PDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLG 200
           PD+DP +KGA S V ++  V L+HE GY +GN+DAT+I Q PK++PH EA+RANL+D LG
Sbjct: 65  PDTDPAYKGADSRVLLRRVVELLHEQGYRVGNVDATIIAQAPKMAPHIEAMRANLADDLG 124

Query: 201 ADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLL 234
                VN+KA T E++   G    IAAH V L+
Sbjct: 125 VALECVNVKATTTERLGFAGREEGIAAHAVALI 157

[Close]
BLAST of CmoCh04G007690 vs. ExPASy TrEMBL
Match: A0A6J1FX89 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cucurbita moschata OX=3662 GN=LOC111447862 PE=3 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 3.7e-126
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0 

Query: 1   MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAA 60
           MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAA
Sbjct: 1   MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAA 60

Query: 61  TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL 120
           TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL
Sbjct: 61  TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL 120

Query: 121 HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ 180
           HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ
Sbjct: 121 HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ 180

Query: 181 RPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 237
           RPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 RPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 236

[Close]
BLAST of CmoCh04G007690 vs. ExPASy TrEMBL
Match: A0A6J1J2X8 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cucurbita maxima OX=3661 GN=LOC111481338 PE=3 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 4.1e-125
Identity = 233/236 (98.73%), Postives = 236/236 (100.00%), Query Frame = 0 

Query: 1   MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAA 60
           MAVPFP+FASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSV+AA
Sbjct: 1   MAVPFPIFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVDAA 60

Query: 61  TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL 120
           TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL
Sbjct: 61  TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL 120

Query: 121 HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ 180
           HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ
Sbjct: 121 HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ 180

Query: 181 RPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 237
           RPKLSPHKEAIRANLS+LLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 RPKLSPHKEAIRANLSNLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 236

[Close]
BLAST of CmoCh04G007690 vs. ExPASy TrEMBL
Match: A0A6J1C4W9 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Momordica charantia OX=3673 GN=LOC111008394 PE=3 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 8.9e-104
Identity = 203/238 (85.29%), Postives = 214/238 (89.92%), Query Frame = 0 

Query: 1   MAVPFPVFASATT--ATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVE 60
           MAVP P FAS  T  AT SHQSLSLS++PR+FPR  F  +SSSSS P+IRV SAA  + E
Sbjct: 1   MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRKF-ALSSSSSPPAIRVTSAA--AAE 60

Query: 61  AATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDV 120
             TA+ S  AAASDSRSKALPFR+GHGFDLHRLEPGYPLIIGGINIPH+RGCEAHSDGDV
Sbjct: 61  PTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIGGINIPHERGCEAHSDGDV 120

Query: 121 LLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLI 180
           LLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLI
Sbjct: 121 LLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLI 180

Query: 181 LQRPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 237
           LQRPKLSPHKEAIR NLS+LLGAD  VVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 LQRPKLSPHKEAIRTNLSELLGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 235

[Close]
BLAST of CmoCh04G007690 vs. ExPASy TrEMBL
Match: A0A5D3D287 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004470 PE=3 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.4e-103
Identity = 200/236 (84.75%), Postives = 208/236 (88.14%), Query Frame = 0 

Query: 1   MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAA 60
           MAV  P FAS   ATTSHQS SLS YP SFPR  F  +SSSSS PS RVNSA S SV + 
Sbjct: 1   MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSST 60

Query: 61  TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL 120
           TA++      SDS SK LPFR+GHGFDLHRLEPGYPLIIGGI+IPHDRGCEAHSDGDVLL
Sbjct: 61  TAIE------SDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLL 120

Query: 121 HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ 180
           HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLILQ
Sbjct: 121 HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQ 180

Query: 181 RPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 237
           RPKLSPHKEAIRANLS+LLGAD SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 RPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 230

[Close]
BLAST of CmoCh04G007690 vs. ExPASy TrEMBL
Match: A0A1S3BTZ8 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cucumis melo OX=3656 GN=LOC103493142 PE=3 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.4e-103
Identity = 200/236 (84.75%), Postives = 208/236 (88.14%), Query Frame = 0 

Query: 1   MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAA 60
           MAV  P FAS   ATTSHQS SLS YP SFPR  F  +SSSSS PS RVNSA S SV + 
Sbjct: 1   MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSST 60

Query: 61  TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL 120
           TA++      SDS SK LPFR+GHGFDLHRLEPGYPLIIGGI+IPHDRGCEAHSDGDVLL
Sbjct: 61  TAIE------SDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLL 120

Query: 121 HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ 180
           HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLILQ
Sbjct: 121 HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQ 180

Query: 181 RPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 237
           RPKLSPHKEAIRANLS+LLGAD SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 RPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 230

[Close]
BLAST of CmoCh04G007690 vs. NCBI nr
Match: XP_022942995.1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucurbita moschata] >XP_023548808.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 460.7 bits (1184), Expect = 7.7e-126
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0 

Query: 1   MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAA 60
           MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAA
Sbjct: 1   MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAA 60

Query: 61  TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL 120
           TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL
Sbjct: 61  TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL 120

Query: 121 HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ 180
           HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ
Sbjct: 121 HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ 180

Query: 181 RPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 237
           RPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 RPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 236

[Close]
BLAST of CmoCh04G007690 vs. NCBI nr
Match: XP_023548820.1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 457.2 bits (1175), Expect = 8.5e-125
Identity = 234/236 (99.15%), Postives = 235/236 (99.58%), Query Frame = 0 

Query: 1   MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAA 60
           MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAA
Sbjct: 1   MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAA 60

Query: 61  TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL 120
           TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL
Sbjct: 61  TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL 120

Query: 121 HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ 180
           HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMH+AGYEIGNLDATLILQ
Sbjct: 121 HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHDAGYEIGNLDATLILQ 180

Query: 181 RPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 237
           RPKLSPHKEAIRANLSDLLGAD SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 RPKLSPHKEAIRANLSDLLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 236

[Close]
BLAST of CmoCh04G007690 vs. NCBI nr
Match: XP_022982530.1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucurbita maxima])

HSP 1 Score: 457.2 bits (1175), Expect = 8.5e-125
Identity = 233/236 (98.73%), Postives = 236/236 (100.00%), Query Frame = 0 

Query: 1   MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAA 60
           MAVPFP+FASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSV+AA
Sbjct: 1   MAVPFPIFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVDAA 60

Query: 61  TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL 120
           TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL
Sbjct: 61  TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL 120

Query: 121 HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ 180
           HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ
Sbjct: 121 HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ 180

Query: 181 RPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 237
           RPKLSPHKEAIRANLS+LLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 RPKLSPHKEAIRANLSNLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 236

[Close]
BLAST of CmoCh04G007690 vs. NCBI nr
Match: KAG6600551.1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031190.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 456.4 bits (1173), Expect = 1.4e-124
Identity = 234/236 (99.15%), Postives = 235/236 (99.58%), Query Frame = 0 

Query: 1   MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAA 60
           MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAA
Sbjct: 1   MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAA 60

Query: 61  TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL 120
           TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL
Sbjct: 61  TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL 120

Query: 121 HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ 180
           HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ
Sbjct: 121 HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ 180

Query: 181 RPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 237
           RPKLSPHKEAIRANLS+LLGAD SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 RPKLSPHKEAIRANLSNLLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 236

[Close]
BLAST of CmoCh04G007690 vs. NCBI nr
Match: XP_022136770.1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Momordica charantia])

HSP 1 Score: 386.3 bits (991), Expect = 1.8e-103
Identity = 203/238 (85.29%), Postives = 214/238 (89.92%), Query Frame = 0 

Query: 1   MAVPFPVFASATT--ATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVE 60
           MAVP P FAS  T  AT SHQSLSLS++PR+FPR  F  +SSSSS P+IRV SAA  + E
Sbjct: 1   MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRKF-ALSSSSSPPAIRVTSAA--AAE 60

Query: 61  AATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDV 120
             TA+ S  AAASDSRSKALPFR+GHGFDLHRLEPGYPLIIGGINIPH+RGCEAHSDGDV
Sbjct: 61  PTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIGGINIPHERGCEAHSDGDV 120

Query: 121 LLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLI 180
           LLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLI
Sbjct: 121 LLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLI 180

Query: 181 LQRPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 237
           LQRPKLSPHKEAIR NLS+LLGAD  VVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 LQRPKLSPHKEAIRTNLSELLGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 235

[Close]
BLAST of CmoCh04G007690 vs. TAIR 10
Match: AT1G63970.1 (isoprenoid F )

HSP 1 Score: 318.2 bits (814), Expect = 5.7e-87
Identity = 161/197 (81.73%), Postives = 173/197 (87.82%), Query Frame = 0 

Query: 40  SSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLII 99
           S S RPS  V++A+S       AVD + +  S+  +K LPFRIGHGFDLHRLEPGYPLII
Sbjct: 42  SLSCRPSASVSAASS-------AVDVNESVTSEKPTKTLPFRIGHGFDLHRLEPGYPLII 101

Query: 100 GGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEA 159
           GGI IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGA SSVFIKEA
Sbjct: 102 GGIVIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAASSVFIKEA 161

Query: 160 VRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSL 219
           VRLM EAGYEIGNLDATLILQRPK+SPHKE IR+NLS LLGAD SVVNLKAKTHEKVDSL
Sbjct: 162 VRLMDEAGYEIGNLDATLILQRPKISPHKETIRSNLSKLLGADPSVVNLKAKTHEKVDSL 221

Query: 220 GENRSIAAHTVVLLMRR 237
           GENRSIAAHTV+LLM++
Sbjct: 222 GENRSIAAHTVILLMKK 231

[Close]
BLAST of CmoCh04G007690 vs. TAIR 10
Match: AT1G63970.2 (isoprenoid F )

HSP 1 Score: 293.5 bits (750), Expect = 1.5e-79
Identity = 153/197 (77.66%), Postives = 165/197 (83.76%), Query Frame = 0 

Query: 40  SSSSRPSIRVNSAASPSVEAATAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLII 99
           S S RPS  V++A+S       AVD + +  S+  +K LPFRIGHGFDLHRLEPGYPLII
Sbjct: 42  SLSCRPSASVSAASS-------AVDVNESVTSEKPTKTLPFRIGHGFDLHRLEPGYPLII 101

Query: 100 GGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEA 159
           GGI IPHDRGCEAHSD        VDAILGALGLPDIGQIFPDSDPKWKGA SSVFIKEA
Sbjct: 102 GGIVIPHDRGCEAHSD--------VDAILGALGLPDIGQIFPDSDPKWKGAASSVFIKEA 161

Query: 160 VRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSL 219
           VRLM EAGYEIGNLDATLILQRPK+SPHKE IR+NLS LLGAD SVVNLKAKTHEKVDSL
Sbjct: 162 VRLMDEAGYEIGNLDATLILQRPKISPHKETIRSNLSKLLGADPSVVNLKAKTHEKVDSL 221

Query: 220 GENRSIAAHTVVLLMRR 237
           GENRSIAAHTV+LLM++
Sbjct: 222 GENRSIAAHTVILLMKK 223

The following BLAST results are available for this feature:
BLAST of CmoCh04G007690 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9CAK88.1e-8681.732-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Arabidop... [more]
Q6EPN61.3e-8378.002-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sa... [more]
Q9M4W36.4e-8370.822-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Catharan... [more]
Q1LLZ41.3e-4354.492-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cupriavidus metallidura... [more]
B8GQ781.7e-4352.292-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thioalkalivibrio sulfid... [more]
BLAST of CmoCh04G007690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FX893.7e-126100.002-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cucurbita moschata OX=3... [more]
A0A6J1J2X84.1e-12598.732-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cucurbita maxima OX=366... [more]
A0A6J1C4W98.9e-10485.292-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Momordica charantia OX=... [more]
A0A5D3D2873.4e-10384.752-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cucumis melo var. makuw... [more]
A0A1S3BTZ83.4e-10384.752-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cucumis melo OX=3656 GN... [more]
BLAST of CmoCh04G007690 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022942995.17.7e-126100.002-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucurbita ... [more]
XP_023548820.18.5e-12599.152-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like [Cucur... [more]
XP_022982530.18.5e-12598.732-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucurbita ... [more]
KAG6600551.11.4e-12499.152-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic, partial [C... [more]
XP_022136770.11.8e-10385.292-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Momordica ... [more]
BLAST of CmoCh04G007690 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G63970.15.7e-8781.73isoprenoid F [more]
AT1G63970.21.5e-7977.66isoprenoid F [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthasePFAMPF02542YgbBcoord: 80..233
e-value: 6.2E-59
score: 198.7
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseTIGRFAMTIGR00151TIGR00151coord: 81..235
e-value: 2.1E-59
score: 198.0
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthasePANTHERPTHR431812-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE, CHLOROPLASTICcoord: 19..236
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseHAMAPMF_00107IspFcoord: 80..235
score: 33.20583
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseCDDcd00554MECDP_synthasecoord: 81..233
e-value: 1.25518E-89
score: 259.299
IPR0365712-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamilyGENE3D3.30.1330.50coord: 77..236
e-value: 1.0E-68
score: 232.3
IPR0365712-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamilySUPERFAMILY69765IpsF-likecoord: 79..235
NoneNo IPR availablePANTHERPTHR43181:SF22-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASEcoord: 19..236
IPR0205552-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved sitePROSITEPS01350ISPFcoord: 114..129

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G007690.1CmoCh04G007690.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0016114 terpenoid biosynthetic process
molecular_function GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
molecular_function GO:0046872 metal ion binding