CmoCh02G015070 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G015070
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	remorin-like
Location	Cmo_Chr02: 8799542 .. 8801797 (+)
RNA-Seq Expression	CmoCh02G015070
Synteny	CmoCh02G015070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGCTCCAAATCCACCAAACCAACACAAACTTCTCTCTCTCTCGCTCTCTCTGTCGAAGAACACAAAGGTTTTGCAGAGAAGAAAAGGCAGCGTGGCTAAGCTGAAGGAGTACGTTATGGGCGGCGCCGACGAGTCTGAACCAGATTCGCAGCCGCCAGTGCCGCTTCAAAACAACTCCCTCATTCCTCACGGTATTTTTCTTCTCTTCCTTTTTTTCTTTTTCTGTTTGGTTTCTGGGAAAACCAAAATCACTCCTTCCCGGAAAGTTTTTGTTTATATTTTCTTCCCACATTTCTTGTCCATGTGTTAGACGAACATGACTCTATATGATATTGTCCACTTTGAGCATAAATTCTCATGACTTTGCTTTAGATTTCTCTAAAAGGTCTCGTACCATGGAGTTAGTATTCCTCACTTATAAACCCATAATCATTCCCTACATTATCCAACACTCTGCCTCTCTTTTGTGTGTGTTTGGCTTTTCGGGAAAATCTTACTTTCCCGGAAAATGCATCCTTGTCTAGACTTAAGTCCTTCATTTCAACGTTTTGTTTATCAAGCATAGAATTTAATTTTGTATAAAAACGTTTCAATTATTTTTATCTCTTAAACTTAATTTTTAAAAATAAAAAATTATTAAATAGGCGTCTCCTCAAAGGAATAATAATAATAATAATAAAAAGAAACGAGCAAAAATAATAATAAATGGAAAATTATATGGTAAAGTTTTAATTACATTTACATAATAATAATTCCTTATTTACTTAAATCATTATTCACAATTCAATTTTTTTACAAATTACAATTTAATTAAAAAAAAATGAATTATTGAACCAAAAAATAGTAAAAAGTGGTTTTTGAATGTACTGGGAAAAGAGTGCCATGACTGATCAGCTTTTTTTGCTACACAGCTTTATTGCCTTGTCTAGAAATTTTTGTATACCCTAATTTCTGAATATTTATGTAAATTATTACAAGACATAAAATATATATATTGTCTTTTGTCTGGTTGTTCTCAATAATCATTTATTTGGGAAGAAAACAGTGTCGAATTTATTTGTTTTCCAATAATTTGTTGGTCCTCTTTGGAAATAAATCTGCAAAATGACACAAAACTAATAATGGTGACAATCACATTCTTCATTAAAAGAAAGAAAAAAACATGTTCTTCTTACAAATTATGTGCTTCATTCGGTTCGTGTCATTTTTTGTTGTATTAGTGGCTGATTTCTTGTCTAACAAAGACAAAATAAATGACAGCCGTTTCAGCTCCTCATTCCGACAAACTTGTTCCTCCAAAGGACAGAGGTAAAACTCTCCATTTTCTTTCTGGTTGCCTCTAATTCAACAGCATTTGCAAGATTCTTGCGTTCGAGATATTCGAAAGTGTTCATTAAAAGTAGAAAACGAAACAAAGAAATTGCTATAGAACGGGGTTTTGTGATCTTAGATGTTGCGTTGGCTCGTGTCGAATTGGAGAAGAAGTTGGCATTGATCAAAGCATGGGAGGAGAGTGAGAAGATCAAGGCAGAGAACAGGTAAGATATAGAAAAGTTTGTTCATTGTTGAATTTTGGATTATGTATTTGAAATCTTTGGATCAGGGCATACAAACGGCTCTCTGCTATTGATTCTTGGGAGAATACCAAAAAAGCTTCAATACAAGCACAGCTGATGAAGTTAGAGGTAAATTTTCATTTCTATACTTCTTTCTCATTGATTAAGACTCGGGTTTTCGATACGAGTTTTGAAGCGTTTGGTCTTTTGTGAAACGAAAGGAGAAAATGGAGAAGAAGAAAGCTGAGTATGGCGAGCTAATGAAGAACAGAATCGTTGGAATTCACAAGCAAGGGGAAGAGAAGAAAGCAACCATTGAAGCCGAGCGAAGAGAACAGTGTCTGAAGGTCGAGGAGACCGCAGCAAAATATCGAGCTTCCGGGTTCACCCCGAAGACTCTACTAAGATGTTTCAGTGGTTGAGATGGGTTGGGGTTGAAAGAATAGACTCCTATCTCAGATTTGCAGTCTGGTTTTAGTTTTGGTTTGGTTTTGTATTGAGTTAGTTGGAGATGACTTGCAGGTGTTCCTTTTGTTGTGTAAAGATTATATCAGTTTGCTGCGTTTTACCCACTGATCACTTTTCTTATGCTCTATGCACTGATAGAGTTCTAATAGCAGTATTGATCCATGTCTTCTGCTGCTTGTTTGCCTACAAAGCACGGGAAATTAATACCCGGATACGGTCCCAAAGAATCAG

mRNA sequence

TTGCTCCAAATCCACCAAACCAACACAAACTTCTCTCTCTCTCGCTCTCTCTGTCGAAGAACACAAAGGTTTTGCAGAGAAGAAAAGGCAGCGTGGCTAAGCTGAAGGAGTACGTTATGGGCGGCGCCGACGAGTCTGAACCAGATTCGCAGCCGCCAGTGCCGCTTCAAAACAACTCCCTCATTCCTCACGCATTTGCAAGATTCTTGCGTTCGAGATATTCGAAAGTGTTCATTAAAAGTAGAAAACGAAACAAAGAAATTGCTATAGAACGGGGTTTTGTGATCTTAGATGTTGCGTTGGCTCGTGTCGAATTGGAGAAGAAGTTGGCATTGATCAAAGCATGGGAGGAGAGTGAGAAGATCAAGGCAGAGAACAGGGCATACAAACGGCTCTCTGCTATTGATTCTTGGGAGAATACCAAAAAAGCTTCAATACAAGCACAGCTGATGAAGTTAGAGGAGAAAATGGAGAAGAAGAAAGCTGAGTATGGCGAGCTAATGAAGAACAGAATCGTTGGAATTCACAAGCAAGGGGAAGAGAAGAAAGCAACCATTGAAGCCGAGCGAAGAGAACAGTGTCTGAAGGTCGAGGAGACCGCAGCAAAATATCGAGCTTCCGGGTTCACCCCGAAGACTCTACTAAGATGTTTCAGTGGTTGAGATGGGTTGGGGTTGAAAGAATAGACTCCTATCTCAGATTTGCAGTCTGGTTTTAGTTTTGGTTTGGTTTTGTATTGAGTTAGTTGGAGATGACTTGCAGGTGTTCCTTTTGTTGTGTAAAGATTATATCAGTTTGCTGCGTTTTACCCACTGATCACTTTTCTTATGCTCTATGCACTGATAGAGTTCTAATAGCAGTATTGATCCATGTCTTCTGCTGCTTGTTTGCCTACAAAGCACGGGAAATTAATACCCGGATACGGTCCCAAAGAATCAG

Coding sequence (CDS)

ATGGGCGGCGCCGACGAGTCTGAACCAGATTCGCAGCCGCCAGTGCCGCTTCAAAACAACTCCCTCATTCCTCACGCATTTGCAAGATTCTTGCGTTCGAGATATTCGAAAGTGTTCATTAAAAGTAGAAAACGAAACAAAGAAATTGCTATAGAACGGGGTTTTGTGATCTTAGATGTTGCGTTGGCTCGTGTCGAATTGGAGAAGAAGTTGGCATTGATCAAAGCATGGGAGGAGAGTGAGAAGATCAAGGCAGAGAACAGGGCATACAAACGGCTCTCTGCTATTGATTCTTGGGAGAATACCAAAAAAGCTTCAATACAAGCACAGCTGATGAAGTTAGAGGAGAAAATGGAGAAGAAGAAAGCTGAGTATGGCGAGCTAATGAAGAACAGAATCGTTGGAATTCACAAGCAAGGGGAAGAGAAGAAAGCAACCATTGAAGCCGAGCGAAGAGAACAGTGTCTGAAGGTCGAGGAGACCGCAGCAAAATATCGAGCTTCCGGGTTCACCCCGAAGACTCTACTAAGATGTTTCAGTGGTTGA

Protein sequence

MGGADESEPDSQPPVPLQNNSLIPHAFARFLRSRYSKVFIKSRKRNKEIAIERGFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLRCFSG

Homology

[Close]

BLAST of CmoCh02G015070 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.0e-35
Identity = 87/175 (49.71%), Postives = 115/175 (65.71%), Query Frame = 0


Query: 4   ADESEPDSQPPVPLQNNSLIPHAFARFLRSRYSKVFIKSRKRNKEIAIERGFVILDVALA 63
           A + +P + PPV       +P       +   SK  +    +  E   + G V  D  LA
Sbjct: 34  APQEKPVAPPPV-------LPSPAPAEEKQEDSKAIVPVVPKEVEEEKKEGSVNRDAVLA 93

Query: 64  RVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKA 123
           RVE EK+++LIKAWEE+EK K EN+A K+LS+I SWEN KKA+++A+L K+EE++EKKKA
Sbjct: 94  RVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKMEEQLEKKKA 153

Query: 124 EYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLRC 179
           EY E MKN+I  IHK+ EEK+A IEA+R E+ LK EE AAKYRA+G  PK L  C
Sbjct: 154 EYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAPKKLFGC 201

[Close]

BLAST of CmoCh02G015070 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.1e-33
Identity = 73/121 (60.33%), Postives = 94/121 (77.69%), Query Frame = 0


Query: 59  DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKM 118
           DV LA +E EKK + IKAWEESEK KAENRA K++S + +WEN+KKA+++AQL K+EEK+
Sbjct: 70  DVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEKL 129

Query: 119 EKKKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLRC 178
           EKKKA+YGE MKN++  IHK  EEK+A +EA++ E+ LK EE  AKYRA+G  PK    C
Sbjct: 130 EKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVPKATCGC 189

Query: 179 F 180
           F
Sbjct: 190 F 190

[Close]

BLAST of CmoCh02G015070 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.7e-33
Identity = 81/146 (55.48%), Postives = 107/146 (73.29%), Query Frame = 0


Query: 36  SKVFIKSRKRNKEIAIER--GFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRL 95
           SK  +    +  E A E+  G +  D  LARV  EK+++LIKAWEESEK KAEN+A K++
Sbjct: 53  SKALVVVETKAPEPADEKKEGSIDRDAVLARVATEKRVSLIKAWEESEKSKAENKAQKKV 112

Query: 96  SAIDSWENTKKASIQAQLMKLEEKMEKKKAEYGELMKNRIVGIHKQGEEKKATIEAERRE 155
           SAI +WEN+KKA+++A+L K+EE++EKKKAEY E MKN+I  +HK+ EEK+A IEA+R E
Sbjct: 113 SAIGAWENSKKANLEAELKKMEEQLEKKKAEYTEKMKNKIALLHKEAEEKRAMIEAKRGE 172

Query: 156 QCLKVEETAAKYRASGFTPKTLLRCF 180
             LK EE AAKYRA+G  PK +L  F
Sbjct: 173 DLLKAEELAAKYRATGTAPKKILGIF 198

[Close]

BLAST of CmoCh02G015070 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.4e-32
Identity = 70/121 (57.85%), Postives = 95/121 (78.51%), Query Frame = 0


Query: 59  DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKM 118
           DV LA +  EK+L+ ++AWEESEK KAEN+A K+++ + +WEN+KKA+++AQL K+EE++
Sbjct: 92  DVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQL 151

Query: 119 EKKKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLRC 178
           EKKKAEY E MKN++  IHK+ EE++A IEA+R E  LK EETAAKYRA+G  PK    C
Sbjct: 152 EKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPKATCGC 211

Query: 179 F 180
           F
Sbjct: 212 F 212

[Close]

BLAST of CmoCh02G015070 vs. ExPASy Swiss-Prot
Match: P93758 (Remorin 4.2 OS=Arabidopsis thaliana OX=3702 GN=REM4.2 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.7e-06
Identity = 36/109 (33.03%), Postives = 60/109 (55.05%), Query Frame = 0


Query: 64  RVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKA 123
           RV+ E+  A I AW+ ++  K  NR  +  + I+ W N +     + + K+E K+E++KA
Sbjct: 157 RVKREEVEAKITAWQTAKLAKINNRFKREDAVINGWFNEQVNKANSWMKKIERKLEERKA 216

Query: 124 EYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTP 173
           +  E  +N +    ++ EE++AT EA+R  +  KV E A   RA G  P
Sbjct: 217 KAMEKTQNNVAKAQRKAEERRATAEAKRGTEVAKVVEVANLMRALGRPP 265

[Close]

BLAST of CmoCh02G015070 vs. ExPASy TrEMBL
Match: A0A6J1H2D2 (remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111459402 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.4e-69
Identity = 151/181 (83.43%), Postives = 156/181 (86.19%), Query Frame = 0


Query: 1   MGGADESEPDSQPPVPLQNNSLIPHAFARFLRSRYSKVFIKSRKRNKEIAIERGFVILDV 60
           MGGADESEPDSQPPVPLQNNSLIPHA    + + +S   +  + R             DV
Sbjct: 1   MGGADESEPDSQPPVPLQNNSLIPHA----VSAPHSDKLVPPKDR-------------DV 60

Query: 61  ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEK 120
           ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEK
Sbjct: 61  ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEK 120

Query: 121 KKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLRCFS 180
           KKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLRCFS
Sbjct: 121 KKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLRCFS 164

Query: 181 G 182
           G
Sbjct: 181 G 164

[Close]

BLAST of CmoCh02G015070 vs. ExPASy TrEMBL
Match: A0A6J1K8E5 (remorin-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491593 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 6.2e-65
Identity = 146/182 (80.22%), Postives = 153/182 (84.07%), Query Frame = 0


Query: 1   MGGADESEPDSQPPVPLQNNSLIPHAFARFLRSRYSKVFIKSRKRNKEIAIERGFVILDV 60
           MGGADESEPDSQP VPLQNNSLIPH     + +  S   +  + +             DV
Sbjct: 1   MGGADESEPDSQPSVPLQNNSLIPHT----VSAPPSDKLVPPKDK-------------DV 60

Query: 61  ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEK 120
           ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENT+KASIQAQLMKLEEKMEK
Sbjct: 61  ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTRKASIQAQLMKLEEKMEK 120

Query: 121 KKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKT-LLRCF 180
           KKAEYGELMKN+IVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKT LLRCF
Sbjct: 121 KKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLLRCF 165

Query: 181 SG 182
           SG
Sbjct: 181 SG 165

[Close]

BLAST of CmoCh02G015070 vs. ExPASy TrEMBL
Match: A0A6J1K4F4 (remorin-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111491593 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.4e-64
Identity = 146/182 (80.22%), Postives = 152/182 (83.52%), Query Frame = 0


Query: 1   MGGADESEPDSQPPVPLQNNSLIPHAFARFLRSRYSKVFIKSRKRNKEIAIERGFVILDV 60
           MGGADESEPDSQP VPLQNNSLIPH       +  S   +  + +             DV
Sbjct: 1   MGGADESEPDSQPSVPLQNNSLIPH-------TPPSDKLVPPKDK-------------DV 60

Query: 61  ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEK 120
           ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENT+KASIQAQLMKLEEKMEK
Sbjct: 61  ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTRKASIQAQLMKLEEKMEK 120

Query: 121 KKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKT-LLRCF 180
           KKAEYGELMKN+IVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKT LLRCF
Sbjct: 121 KKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLLRCF 162

Query: 181 SG 182
           SG
Sbjct: 181 SG 162

[Close]

BLAST of CmoCh02G015070 vs. ExPASy TrEMBL
Match: A0A6J1K6G7 (remorin-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491593 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 4.5e-63
Identity = 145/182 (79.67%), Postives = 152/182 (83.52%), Query Frame = 0


Query: 1   MGGADESEPDSQPPVPLQNNSLIPHAFARFLRSRYSKVFIKSRKRNKEIAIERGFVILDV 60
           MGGADESEPDSQP VPLQNNSLIPH     + +  S   +  + +             DV
Sbjct: 1   MGGADESEPDSQPSVPLQNNSLIPHT----VSAPPSDKLVPPKDK-------------DV 60

Query: 61  ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEK 120
           ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENT+KASIQAQLMKL EKMEK
Sbjct: 61  ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTRKASIQAQLMKL-EKMEK 120

Query: 121 KKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKT-LLRCF 180
           KKAEYGELMKN+IVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKT LLRCF
Sbjct: 121 KKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLLRCF 164

Query: 181 SG 182
           SG
Sbjct: 181 SG 164

[Close]

BLAST of CmoCh02G015070 vs. ExPASy TrEMBL
Match: A0A1S3AU46 (remorin isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482726 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 3.9e-51
Identity = 118/178 (66.29%), Postives = 135/178 (75.84%), Query Frame = 0


Query: 4   ADESEPDSQPPVPLQNNSLIPHAFARFLRSRYSKVFIKSRKRNKEIAIERGFVILDVALA 63
           AD+SEPD  PP     +  +PH              I       + A +R     D+ALA
Sbjct: 62  ADDSEPDQPPPQNDVASISLPHTDK-----------ISDSAEKVDAAKDR-----DIALA 121

Query: 64  RVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKA 123
           RVE EKK+ALIKAWEESEKIKAEN+AYKRLSA++SWENT+KASI+AQLMK+EEKMEKKKA
Sbjct: 122 RVEWEKKMALIKAWEESEKIKAENKAYKRLSAVESWENTRKASIEAQLMKIEEKMEKKKA 181

Query: 124 EYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLRCFSG 182
           EY E MKN+IVGIHK+GEEKKATIEAER+EQCLKVEETA KYR SGF PKTLL+CFSG
Sbjct: 182 EYAEQMKNKIVGIHKEGEEKKATIEAERKEQCLKVEETAEKYRTSGFIPKTLLKCFSG 223

[Close]

BLAST of CmoCh02G015070 vs. NCBI nr
Match: XP_022958055.1 (remorin-like [Cucurbita moschata])

HSP 1 Score: 271.6 bits (693), Expect = 5.1e-69
Identity = 151/181 (83.43%), Postives = 156/181 (86.19%), Query Frame = 0


Query: 1   MGGADESEPDSQPPVPLQNNSLIPHAFARFLRSRYSKVFIKSRKRNKEIAIERGFVILDV 60
           MGGADESEPDSQPPVPLQNNSLIPHA    + + +S   +  + R             DV
Sbjct: 1   MGGADESEPDSQPPVPLQNNSLIPHA----VSAPHSDKLVPPKDR-------------DV 60

Query: 61  ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEK 120
           ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEK
Sbjct: 61  ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEK 120

Query: 121 KKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLRCFS 180
           KKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLRCFS
Sbjct: 121 KKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLRCFS 164

Query: 181 G 182
           G
Sbjct: 181 G 164

[Close]

BLAST of CmoCh02G015070 vs. NCBI nr
Match: KAG7036055.1 (hypothetical protein SDJN02_02855 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 269.6 bits (688), Expect = 1.9e-68
Identity = 151/181 (83.43%), Postives = 155/181 (85.64%), Query Frame = 0


Query: 1   MGGADESEPDSQPPVPLQNNSLIPHAFARFLRSRYSKVFIKSRKRNKEIAIERGFVILDV 60
           MGGADESEPDSQPPVPLQNNSLIPHA    + +  S   +  + R             DV
Sbjct: 1   MGGADESEPDSQPPVPLQNNSLIPHA----VSAPPSDKLVPPKDR-------------DV 60

Query: 61  ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEK 120
           ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEK
Sbjct: 61  ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEK 120

Query: 121 KKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLRCFS 180
           KKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLRCFS
Sbjct: 121 KKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLRCFS 164

Query: 181 G 182
           G
Sbjct: 181 G 164

[Close]

BLAST of CmoCh02G015070 vs. NCBI nr
Match: KAG6606111.1 (Remorin 1.4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 268.1 bits (684), Expect = 5.6e-68
Identity = 150/181 (82.87%), Postives = 155/181 (85.64%), Query Frame = 0


Query: 1   MGGADESEPDSQPPVPLQNNSLIPHAFARFLRSRYSKVFIKSRKRNKEIAIERGFVILDV 60
           MGGADESEPDSQPPVPLQNNSLIPHA    + +  S   +  + R             DV
Sbjct: 1   MGGADESEPDSQPPVPLQNNSLIPHA----VSAPPSDKLVPPKDR-------------DV 60

Query: 61  ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEK 120
           ALARVEL+KKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEK
Sbjct: 61  ALARVELKKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEK 120

Query: 121 KKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLRCFS 180
           KKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLRCFS
Sbjct: 121 KKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLRCFS 164

Query: 181 G 182
           G
Sbjct: 181 G 164

[Close]

BLAST of CmoCh02G015070 vs. NCBI nr
Match: XP_023521230.1 (remorin-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 262.7 bits (670), Expect = 2.4e-66
Identity = 148/182 (81.32%), Postives = 155/182 (85.16%), Query Frame = 0


Query: 1   MGGADESEPDSQPPVPLQNNSLIPHAFARFLRSRYSKVFIKSRKRNKEIAIERGFVILDV 60
           MGGADESEPDSQPPVPLQNNSLIPHA    + + +S   +  + R             DV
Sbjct: 1   MGGADESEPDSQPPVPLQNNSLIPHA----VSAPHSDKLVPPKDR-------------DV 60

Query: 61  ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEK 120
           ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEK
Sbjct: 61  ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEK 120

Query: 121 KKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKT-LLRCF 180
           KKAEYGELMKN+IVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPK  LL+CF
Sbjct: 121 KKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKALLLKCF 165

Query: 181 SG 182
           SG
Sbjct: 181 SG 165

[Close]

BLAST of CmoCh02G015070 vs. NCBI nr
Match: XP_023521232.1 (remorin-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.2 bits (666), Expect = 6.8e-66
Identity = 148/182 (81.32%), Postives = 153/182 (84.07%), Query Frame = 0


Query: 1   MGGADESEPDSQPPVPLQNNSLIPHAFARFLRSRYSKVFIKSRKRNKEIAIERGFVILDV 60
           MGGADESEPDSQPPVPLQNNSLIPHA        +S   +  + R             DV
Sbjct: 1   MGGADESEPDSQPPVPLQNNSLIPHA-------PHSDKLVPPKDR-------------DV 60

Query: 61  ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEK 120
           ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEK
Sbjct: 61  ALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEK 120

Query: 121 KKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKT-LLRCF 180
           KKAEYGELMKN+IVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPK  LL+CF
Sbjct: 121 KKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKALLLKCF 162

Query: 181 SG 182
           SG
Sbjct: 181 SG 162

[Close]

BLAST of CmoCh02G015070 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein )

HSP 1 Score: 149.1 bits (375), Expect = 3.5e-36
Identity = 87/175 (49.71%), Postives = 115/175 (65.71%), Query Frame = 0


Query: 4   ADESEPDSQPPVPLQNNSLIPHAFARFLRSRYSKVFIKSRKRNKEIAIERGFVILDVALA 63
           A + +P + PPV       +P       +   SK  +    +  E   + G V  D  LA
Sbjct: 34  APQEKPVAPPPV-------LPSPAPAEEKQEDSKAIVPVVPKEVEEEKKEGSVNRDAVLA 93

Query: 64  RVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKA 123
           RVE EK+++LIKAWEE+EK K EN+A K+LS+I SWEN KKA+++A+L K+EE++EKKKA
Sbjct: 94  RVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKMEEQLEKKKA 153

Query: 124 EYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLRC 179
           EY E MKN+I  IHK+ EEK+A IEA+R E+ LK EE AAKYRA+G  PK L  C
Sbjct: 154 EYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAPKKLFGC 201

[Close]

BLAST of CmoCh02G015070 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein )

HSP 1 Score: 146.7 bits (369), Expect = 1.8e-35
Identity = 88/179 (49.16%), Postives = 117/179 (65.36%), Query Frame = 0


Query: 4   ADESEPDSQPPVPLQNNSLIPHAFARFLRSRYSKVFI----KSRKRNKEIAIERGFVILD 63
           A + +P + PPV       +P       +   SK  +    K  +  KE ++ R     D
Sbjct: 34  APQEKPVAPPPV-------LPSPAPAEEKQEDSKAIVPVVPKVEEEKKEGSVNR-----D 93

Query: 64  VALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKME 123
             LARVE EK+++LIKAWEE+EK K EN+A K+LS+I SWEN KKA+++A+L K+EE++E
Sbjct: 94  AVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKMEEQLE 153

Query: 124 KKKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLRC 179
           KKKAEY E MKN+I  IHK+ EEK+A IEA+R E+ LK EE AAKYRA+G  PK L  C
Sbjct: 154 KKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAPKKLFGC 200

[Close]

BLAST of CmoCh02G015070 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein )

HSP 1 Score: 143.7 bits (361), Expect = 1.5e-34
Identity = 73/121 (60.33%), Postives = 94/121 (77.69%), Query Frame = 0


Query: 59  DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKM 118
           DV LA +E EKK + IKAWEESEK KAENRA K++S + +WEN+KKA+++AQL K+EEK+
Sbjct: 70  DVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEKL 129

Query: 119 EKKKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLRC 178
           EKKKA+YGE MKN++  IHK  EEK+A +EA++ E+ LK EE  AKYRA+G  PK    C
Sbjct: 130 EKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVPKATCGC 189

Query: 179 F 180
           F
Sbjct: 190 F 190

[Close]

BLAST of CmoCh02G015070 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein )

HSP 1 Score: 141.0 bits (354), Expect = 9.6e-34
Identity = 70/121 (57.85%), Postives = 95/121 (78.51%), Query Frame = 0


Query: 59  DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKM 118
           DV LA +  EK+L+ ++AWEESEK KAEN+A K+++ + +WEN+KKA+++AQL K+EE++
Sbjct: 92  DVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQL 151

Query: 119 EKKKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKTLLRC 178
           EKKKAEY E MKN++  IHK+ EE++A IEA+R E  LK EETAAKYRA+G  PK    C
Sbjct: 152 EKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPKATCGC 211

Query: 179 F 180
           F
Sbjct: 212 F 212

[Close]

BLAST of CmoCh02G015070 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein )

HSP 1 Score: 131.7 bits (330), Expect = 5.8e-31
Identity = 69/126 (54.76%), Postives = 93/126 (73.81%), Query Frame = 0


Query: 54  GFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMK 113
           G V  D  L R+E +K+++LIKAWEE+EK K EN+A K++S++ +WEN+KKAS++A+L K
Sbjct: 50  GSVHRDAVLVRLEQDKRISLIKAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAELKK 109

Query: 114 LEEKMEKKKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPK 173
           +EE++ KKKA Y E MKN+I  IHK+ EEK+A  EA+R E  LK EE AAKYRA+G  P 
Sbjct: 110 IEEQLNKKKAHYTEQMKNKIAQIHKEAEEKRAMTEAKRGEDVLKAEEMAAKYRATGTAPT 169

Query: 174 TLLRCF 180
            L   F
Sbjct: 170 KLFGFF 175

The following BLAST results are available for this feature:

BLAST of CmoCh02G015070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFA5	5.0e-35	49.71	Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1	[more]
O80837	2.1e-33	60.33	Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1	[more]
P93788	2.7e-33	55.48	Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1	[more]
Q9M2D8	1.4e-32	57.85	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P...	[more]
P93758	1.7e-06	33.03	Remorin 4.2 OS=Arabidopsis thaliana OX=3702 GN=REM4.2 PE=1 SV=1	[more]

BLAST of CmoCh02G015070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H2D2	2.4e-69	83.43	remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111459402 PE=3 SV=1	[more]
A0A6J1K8E5	6.2e-65	80.22	remorin-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491593 PE=3 SV=1	[more]
A0A6J1K4F4	1.4e-64	80.22	remorin-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111491593 PE=3 SV=1	[more]
A0A6J1K6G7	4.5e-63	79.67	remorin-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491593 PE=3 SV=1	[more]
A0A1S3AU46	3.9e-51	66.29	remorin isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482726 PE=3 SV=1	[more]

BLAST of CmoCh02G015070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958055.1	5.1e-69	83.43	remorin-like [Cucurbita moschata]	[more]
KAG7036055.1	1.9e-68	83.43	hypothetical protein SDJN02_02855 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6606111.1	5.6e-68	82.87	Remorin 1.4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023521230.1	2.4e-66	81.32	remorin-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023521232.1	6.8e-66	81.32	remorin-like isoform X3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh02G015070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23750.1	3.5e-36	49.71	Remorin family protein	[more]
AT5G23750.2	1.8e-35	49.16	Remorin family protein	[more]
AT2G45820.1	1.5e-34	60.33	Remorin family protein	[more]
AT3G61260.1	9.6e-34	57.85	Remorin family protein	[more]
AT3G48940.1	5.8e-31	54.76	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 104..131
None	No IPR available	PANTHER	PTHR31775	OS02G0117200 PROTEIN	coord: 52..180
None	No IPR available	PANTHER	PTHR31775:SF28	REMORIN-LIKE	coord: 52..180
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 69..173 e-value: 6.0E-28 score: 96.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G015070.1	CmoCh02G015070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006950	response to stress
cellular_component	GO:0016020	membrane