CmoCh02G011520 (gene) Cucurbita moschata (Rifu) v1

InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Position :
0
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TTCGCGTATTCTGCATCTGTCTGCTACCGTTGAAGCTAGCTTGTTTGGCCGCGAAACTCTCTACAATGGCGGCTTTCCTTCTTCTCTCGTCTCCTTCTTTCACCTACCACAGGATGAGCGAAATCTGTCTTTGCATGCAGTCCTTGCAGCTGCAAAAGGGCATCACATGCTCCTCAGTTAGCCTTCAAAAACAGAAATGTAATATCAAGCTTTATGCGGTACCTGTTAGAGCCTTTTCTTGTCAATTTGCATCGACTGGTTCTGCTTCTAGTAGAGCTGATTTGGGCAGTCAGAGGAAACATATTGCTTCTGCCTTCACTGTTCCAAATGGATATCAGAGTAGGCCTGGTCACATGCACTACCGTACTGATGGGACCAGCACGAGTGAATTTGAGGGTCAATTGGACGAATTATTCAACGAAGTCAGAATGCTGATTGTTAGCGGAAGGAAGAGTGATGCTGTTGAGCTACTTCAAGCAAATTATGAAGCTGTAAAAGAACAGATGGAATCAGGTGCTATTGGCATTGAACAAGCTGCTGTTCTTGACATCGTGGCTTTGGGGTATATAACTGTTGGAGACTTGAAGTTTGTTGCTTCTATACTGGATATATTGAACAACATTGTTGACAGTCTGAAGGACAATGAACCTTTTCTGGATTCAGTGCTTCTGCATATGGGGAGCATGTACTCAACTTTAAAAAAGTTAGAGAAATCAATGTCTGCGTACAAGAGGGCTATTGACATCATAGAGAAGAAAAGTGGAAAAGACAGTAGCTTTCTCATCACTCCAATTTTAGGGATGGCAAAAGTTCTTGGTACCAGTGGAAAAACTACAAAAGCAGTAGAATCTTACCATCGTGCAATTTCAATTTTGGAATCAACCAGAGGCTTTGAGGACGAGGATTTGGTTATACCTTTATTTAGTCTGGGCAACCTTTTGCTCAAAGAAGGAAAAGGCAAGGATGCAGAAACTTGTTTTGCTAGGATTGTGAACATATACAAAAAGTTATATGGAGAGAAAGATGGAAAAGTTGGAATGGCTATGTATTCTCTGGCTAATGCGAAGTGTGCAAGAGGGGAAGCAGACGAAGCTATTACCTTGTATAGAAGAGCTTTGCAGATTATAAAGGATTCAAATTATATGGCTTTAGATGATAGCGAGATGGAGAAGATGAGGATTGATTTGGCAGAACTACTACATGCTGTAGGAAGAGGGAAGGAAGGCAGGGAACTTCTGGAAGAGTGCTTGTTGATCAATGAAAAGTCAAAAGGAAAAGACCATCCCAGCTCAGTGAAGCACCTTGTAAACCTTGCAGCTTCTTATTCACGGTCAAAGAATTACGCCGAGGCCGAGCGTTTACTGCGAATCGGATTAGACATTATGGTAAAAGCAGTGGGACCAGATGATCAATCAATTACAAACCCAATGTTGAATCTCGCTGTCACTCTTTACAATCTAAAACGAGATGATGATGCCGAGCAACTTGCACTAGAAGTCTTGCGAATACGGGAAAATGCATTCGGAAAAGATTGTCTTCCTGTTGGTGAAGCTCTAGATTGTCTGGTTTCCATTCAGAGCAGGCTCGGAAAGGACGATACCGAGCTACTGAAGCTGCTAAAGAGAATTCTAAGAATCCAGGAGAAAGCGTTCGGGTATGAGGCAAAAGAGGTCATTGACACCCTCAAGAAAATAGTATTCTACATGGATAAACTAGGAATGAAAGATGAGAAGTTTCCAGTTCAAAAACGACTGTCCCTGCTTCGAACGAAATTCAAGAACCAGATGCAATACTAACGGTACTCATCATTCATCCATCTTTCTTAATCTTGTGATTATATTTTCCCTTCTTTGAGTTAGAGATAGAGATGAGGTTTCTGGGTTAACTATATACATAGATCGCATATATTTCGATGGTCATATCGATTTAGTTATGATATATCCTGAGCTTGCTTTGAATTGTGATTCTACGTAGTTCCTAAAAAGAGTTATGATATATCCTGAGCTTACTTTGAATCGTGATTCTATGTAATTCCTAAAAAGAGTTATAATATCTCGAGCTTACTTTGAATTGTGATTGTATGTAGTTCCTAAAGAGTTATAATATATCCCGAGCTTGCTTTGAATTGTGATTATATGTAGTTCCTAAAAAGAGTTATGATATATCCCGAGCTTATTTTGAATTGTGATTCTGTGTAGTTCCTAAAAAGAGTTATAATATCTTGAGCTTACTTTGAATTGTGATT2004006008001000120014001600180020002200Score = Expect = 1.3E-6 / Score = 28.0Score = Expect = 14.0 / Score = 13.6Expect = 54.0 / Score = 8.5Expect = 19.0 / Score = 12.6Expect = 0.12 / Score = 21.5Expect = 300.0 / Score = 1.9Expect = 52.0 / Score = 8.7Expect = 51.0 / Score = 8.7Score = 8.8799Expect = 7.3E-30 / Score = 105.7Expect = 2.3E-29 / Score = 104.3Score = Expect = 1.6E-11 / Score = 44.1SequenceCoilPF13374PTHR45641SM00028PS50005G3DSA:1.25.40.10G3DSA:1.25.40.10SSF48452PF17874
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 211..231
NoneNo IPR availablePFAMPF13374TPR_10coord: 455..489
e-value: 1.3E-6
score: 28.0
NoneNo IPR availablePANTHERPTHR45641TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)coord: 113..555
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 410..443
e-value: 52.0
score: 8.7
coord: 282..315
e-value: 19.0
score: 12.6
coord: 368..401
e-value: 300.0
score: 1.9
coord: 240..273
e-value: 54.0
score: 8.5
coord: 324..357
e-value: 0.12
score: 21.5
coord: 452..485
e-value: 51.0
score: 8.7
coord: 198..231
e-value: 14.0
score: 13.6
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 198..231
score: 8.8799
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 368..575
e-value: 7.3E-30
score: 105.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 198..367
e-value: 2.3E-29
score: 104.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 200..439
IPR041617MalT-like TPR regionPFAMPF17874TPR_MalTcoord: 200..434
e-value: 1.6E-11
score: 44.1