Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCGAATCTTCCATCGTCTGTGGGAACGGCGTCGGCCGTAGATGCCATTTCCCCTCTCATTCAGCAGAGTCCTCCGAGAAGCGATCGAAATGGACGAAGCCAAGGCGACGGCAATGGCTGCTCAACACCAACAACAGCTGCTACTGCAACAGCACAAACAGCAACAGCAACAGCAGCAGCAACAAACTCAGCAGCACCAGCAATTTCTTCTTCTTCAACAATTGCAGAAACAGCAGCAGGCTCAGCAGCAGGCTGCCGCTATCTCTCGCTTTCCTTCCAATATCGACGCCCATTTGCGCCCACCGGGTCTTCATCTCCGCCCTGGATCCATTAATCTCCATCAAAACCTTAACCCTAATCCAGCCGCGTCTGTTCCTAATTTGCAGTCTAACCCTAGTCCCACTCAACCACCGTCACAACAATTGCAGCAGCAGAAACAGCAGCAACAGCAACAACAGCAACAACACCAGCTGCAACAGAGGGCAATGCGAACCGGAAACCAGGCGGAACTCCAGATGGCTTATCAGGACGCTTGGCGTGTGTGCCATCCTGACATTAAGCGCCCTTTTGGTTCCCTTGAAGATGCCTGCGAGAGGTTCGTCATTTTGAAATGCGTGTTTTTAGTGCAGTTTTTTTTGTGTATGAAGTTCCTAAATCATATAATTATGTTTTGAAGACTATTGCTAGCGAGGATTTTGCTTTTATTTGGAATAACAAATTTTCACTGGGTAATTTCTTGCATTTATCATTCTTTTAAACTCTGTTCCGATCATTAGTTTAGGACCATGGATTATGGCGTGTGCTTAAGGAGCTTAATGGATTAAGAAGACACCTGTAGAAAAGGAAACTAGTAGTATGTGTGTTGAGATTACTAAGCACACTGCATAAAAATTTGGCTCCCCTTGAATATGATGCATCTGGTGCAGTAGATCTAGATTCTATTCTTGCAATTATGAATTGTGTTATGCAAATTCTAATTATTGCTTGGATTGGTGACTGACTAACTTTTGTTTCTCGACACGAAAAGGGCACGCAGAAAAAGCCCACCAATGGAAGTCGAACGTTAGCTATGCAAAAAAGGCTTCCAGTTCCAAACAACAAAACCTAACAGAGAATTACAATATTCCTTGGAAACCGAGGCCCAAGTAGAGGCATTAAGCCTAATGAGAAACCACACCTCCTCCTGATCATCCTGTGAATCATGGTGTTCCAGGGAGATTGTAGGCGAAGTTACAATGAATTTTTATCCAAATTCTGTTCTTATAGCAATTCTAATAGACTGGAACTATTTCCTCCCTTGATTTCTTAATCTACTTTGGGCCTCAATATAATATTTTCATACTGCGTATGGCCTCCCTTTCTACGGATTTCTCTAAGACAAATCAGGAGGCAAGAGCAAAACTTCTGTATTGAGGAAAGTTCACAATCTCCGCATTTCTGTTAACATTGACAAGGTTAATGTGGTTTCTTCTCAATGAGTTTATGTTTTCAAATGAGAATCCTTAGCTGGGACATTAGGAGTTTGCAGGCCACGTACAGTTCGGGCTCTCTGTTTGGTAAATTTTTCAAGCAATAAAAGTTTAGTAATTTGGGTATCTTCTTCCTAACTTCATTTGGGGCTTCCACAAGATTGGCTGGCCATCTTTTAATTTCCTCGGGTTCTCCGGTGATATTATTATAATGGGGATTTATCCATGATCCATGATCCTTGATGGAGGTGCTCTCTCTCTCTTTCTTAATCTGAGACTTCTCGTTTTATTCATTTATATTTAATTATTATTATCATCATTTTTCATTTTTTTGTGCCTGTGGCTGTTCCTCAAGACACTAAAGACTTAGGAGTTGAATTTGAAAGTTCAGTGGGCTTTAGTGAGGAGACATGGATACCGGTTGGTGATTTCATTGTCCTGCGGCGGTCTTTTGGGAAATCCTTACTGACCATGTTACTTGTATCATGAAGCCCTTCTATAGGATTATAGATCTCCTTTAATGGATGTCCTTGATGCTTTGGAAAGTGCAAGTTCAAATGCTTGTGGAGGGGGATGAAAATACTCCCTTTTTTCAGGATTGATGCTGCAAAAAGTGAGGGAAAACTGAAGAATCCATGTTAACTCTTTGGACTATCTGGGCGGAGAAAATGGAAGGTCTTTCAAAATTTAGGAAGATCCTTGAGGGAGTTTGTTTTAATAGTGTTTCTTCTACTGGGTTCTCTCCCAAGATTCTCTTTGTTCCAAATTATAGCATTTCTTTATTTGTTATACCCTATTGGATTTTCTTTTAGTGCCGTCCCCTCTCGTGGCTTTGTTAGTCATTTTGTATGTTTCATTTTACCAATGTAGTAGTTTCTTATCTCTCTTTTGTAGAGTCAAGGATACATTGATAGTTACAATCCCCATACTACCTATAATTCTAAAAGTTCATTGATCGTTATAATGATACATAGGCGAGATCGATCCCTTTAAAATTTAAAGTAGTTACATATGGTCTTCGCCTATTCCTTCTATTACTTGGTTGTTTGTATGAGTGTGAAAGAGCACTGGATAACTTGGAAGTGTTGGGAGTAGCATGCTTTATAGCATCTATTCCTCCATATTCTTATCACAATTTGATGATTCATTGATGCATTATGCAAAAAATTTGTACAGGCTGTTGCCATATCATGTGGTGGCTGACTATGAGGCCGAAGAAGATGATAGAATCCTCGACTCTGATCCAACTGGCCAAATGCTGTCACGCTCTCAGCAGTGGGATCATAACATCTCGGCCAAAATTTCTGAATTCATTGCCACTTTTGAGAAGCAGGTGTTGGCCTTTAACATCATAACTCGCAAAAGGACACTGGGGGAGTTCCGTTCAGAAGAGAGATTGATGTTTGAACAAGCCCTTATGCAAGAGGAGAAACGGAACCTCTTGGAACTAAAAGCTGAGATTGAATTGAGAGGGAAGGCTGGAAGAGAGGCTCATGATGCCAAAATGCGGATGGCAGCAATGATGCAGACGACTGACCTAACGAGGGCTGAACCACAGGCTAACGAAATGATGGTTCGTGGTCCCTTGAGAACAGGTGCGCATGTTGGGTCCCAAAGCAGCGATGTTCGAGTTGGCCATAGTGTTGGGGAGCAGGAGCAAGTTCATCCAAATGAAATGGTCAATGGATGGGGAAACAACAACACACAGGGAGATGATAAAGAAGCATCAGAGGATCTATTAAATGATGAGGAGGCTGAGAATGGCGATACAGGCATGCATGATAGTTGGCGCGAAGTCGGGGAATTTGACCTGAACACGAGATGAAATCTTGGTTTAACAGCTTAACAATGGAGTTTAAGTGAAGTAGAGCTGTTTTCTCCAATCATCGAGGTTCGTTTAAGATGAGATGTGCTTGTGTATTTGACGAAACATGCTTGCATATGAGACGAAAGCCGAATTACCAGTCGAGGATGATGGGTACGTTGGATCTTTGTGTAGGAAATACATGTATTACTTGTACTTCTCTATATTGGTGATAGAAGTATTACAATTTCCGAGAAGGAACATGCTGTACTTAAAAAGTAGTATATGATGTGATAGAAAAAAGATTTGGAAAGTAGCAAGAAATTGACGAGAATATGCTTTTG
mRNA sequence
ATTCGAATCTTCCATCGTCTGTGGGAACGGCGTCGGCCGTAGATGCCATTTCCCCTCTCATTCAGCAGAGTCCTCCGAGAAGCGATCGAAATGGACGAAGCCAAGGCGACGGCAATGGCTGCTCAACACCAACAACAGCTGCTACTGCAACAGCACAAACAGCAACAGCAACAGCAGCAGCAACAAACTCAGCAGCACCAGCAATTTCTTCTTCTTCAACAATTGCAGAAACAGCAGCAGGCTCAGCAGCAGGCTGCCGCTATCTCTCGCTTTCCTTCCAATATCGACGCCCATTTGCGCCCACCGGGTCTTCATCTCCGCCCTGGATCCATTAATCTCCATCAAAACCTTAACCCTAATCCAGCCGCGTCTGTTCCTAATTTGCAGTCTAACCCTAGTCCCACTCAACCACCGTCACAACAATTGCAGCAGCAGAAACAGCAGCAACAGCAACAACAGCAACAACACCAGCTGCAACAGAGGGCAATGCGAACCGGAAACCAGGCGGAACTCCAGATGGCTTATCAGGACGCTTGGCGTGTGTGCCATCCTGACATTAAGCGCCCTTTTGGTTCCCTTGAAGATGCCTGCGAGAGGCTGTTGCCATATCATGTGGTGGCTGACTATGAGGCCGAAGAAGATGATAGAATCCTCGACTCTGATCCAACTGGCCAAATGCTGTCACGCTCTCAGCAGTGGGATCATAACATCTCGGCCAAAATTTCTGAATTCATTGCCACTTTTGAGAAGCAGGTGTTGGCCTTTAACATCATAACTCGCAAAAGGACACTGGGGGAGTTCCGTTCAGAAGAGAGATTGATGTTTGAACAAGCCCTTATGCAAGAGGAGAAACGGAACCTCTTGGAACTAAAAGCTGAGATTGAATTGAGAGGGAAGGCTGGAAGAGAGGCTCATGATGCCAAAATGCGGATGGCAGCAATGATGCAGACGACTGACCTAACGAGGGCTGAACCACAGGCTAACGAAATGATGGTTCGTGGTCCCTTGAGAACAGGTGCGCATGTTGGGTCCCAAAGCAGCGATGTTCGAGTTGGCCATAGTGTTGGGGAGCAGGAGCAAGTTCATCCAAATGAAATGGTCAATGGATGGGGAAACAACAACACACAGGGAGATGATAAAGAAGCATCAGAGGATCTATTAAATGATGAGGAGGCTGAGAATGGCGATACAGGCATGCATGATAGTTGGCGCGAAGTCGGGGAATTTGACCTGAACACGAGATGAAATCTTGGTTTAACAGCTTAACAATGGAGTTTAAGTGAAGTAGAGCTGTTTTCTCCAATCATCGAGGTTCGTTTAAGATGAGATGTGCTTGTGTATTTGACGAAACATGCTTGCATATGAGACGAAAGCCGAATTACCAGTCGAGGATGATGGGTACGTTGGATCTTTGTGTAGGAAATACATGTATTACTTGTACTTCTCTATATTGGTGATAGAAGTATTACAATTTCCGAGAAGGAACATGCTGTACTTAAAAAGTAGTATATGATGTGATAGAAAAAAGATTTGGAAAGTAGCAAGAAATTGACGAGAATATGCTTTTG
Coding sequence (CDS)
ATGCCATTTCCCCTCTCATTCAGCAGAGTCCTCCGAGAAGCGATCGAAATGGACGAAGCCAAGGCGACGGCAATGGCTGCTCAACACCAACAACAGCTGCTACTGCAACAGCACAAACAGCAACAGCAACAGCAGCAGCAACAAACTCAGCAGCACCAGCAATTTCTTCTTCTTCAACAATTGCAGAAACAGCAGCAGGCTCAGCAGCAGGCTGCCGCTATCTCTCGCTTTCCTTCCAATATCGACGCCCATTTGCGCCCACCGGGTCTTCATCTCCGCCCTGGATCCATTAATCTCCATCAAAACCTTAACCCTAATCCAGCCGCGTCTGTTCCTAATTTGCAGTCTAACCCTAGTCCCACTCAACCACCGTCACAACAATTGCAGCAGCAGAAACAGCAGCAACAGCAACAACAGCAACAACACCAGCTGCAACAGAGGGCAATGCGAACCGGAAACCAGGCGGAACTCCAGATGGCTTATCAGGACGCTTGGCGTGTGTGCCATCCTGACATTAAGCGCCCTTTTGGTTCCCTTGAAGATGCCTGCGAGAGGCTGTTGCCATATCATGTGGTGGCTGACTATGAGGCCGAAGAAGATGATAGAATCCTCGACTCTGATCCAACTGGCCAAATGCTGTCACGCTCTCAGCAGTGGGATCATAACATCTCGGCCAAAATTTCTGAATTCATTGCCACTTTTGAGAAGCAGGTGTTGGCCTTTAACATCATAACTCGCAAAAGGACACTGGGGGAGTTCCGTTCAGAAGAGAGATTGATGTTTGAACAAGCCCTTATGCAAGAGGAGAAACGGAACCTCTTGGAACTAAAAGCTGAGATTGAATTGAGAGGGAAGGCTGGAAGAGAGGCTCATGATGCCAAAATGCGGATGGCAGCAATGATGCAGACGACTGACCTAACGAGGGCTGAACCACAGGCTAACGAAATGATGGTTCGTGGTCCCTTGAGAACAGGTGCGCATGTTGGGTCCCAAAGCAGCGATGTTCGAGTTGGCCATAGTGTTGGGGAGCAGGAGCAAGTTCATCCAAATGAAATGGTCAATGGATGGGGAAACAACAACACACAGGGAGATGATAAAGAAGCATCAGAGGATCTATTAAATGATGAGGAGGCTGAGAATGGCGATACAGGCATGCATGATAGTTGGCGCGAAGTCGGGGAATTTGACCTGAACACGAGATGA
Protein sequence
MPFPLSFSRVLREAIEMDEAKATAMAAQHQQQLLLQQHKQQQQQQQQQTQQHQQFLLLQQLQKQQQAQQQAAAISRFPSNIDAHLRPPGLHLRPGSINLHQNLNPNPAASVPNLQSNPSPTQPPSQQLQQQKQQQQQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACERLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIITRKRTLGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAMMQTTDLTRAEPQANEMMVRGPLRTGAHVGSQSSDVRVGHSVGEQEQVHPNEMVNGWGNNNTQGDDKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
Homology
BLAST of CmoCh02G010690 vs. ExPASy TrEMBL
Match:
A0A6J1H2M5 (putative mediator of RNA polymerase II transcription subunit 26 OS=Cucurbita moschata OX=3662 GN=LOC111459804 PE=4 SV=1)
HSP 1 Score: 736.9 bits (1901), Expect = 4.5e-209
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0
Query: 1 MPFPLSFSRVLREAIEMDEAKATAMAAQHQQQLLLQQHKQQQQQQQQQTQQHQQFLLLQQ 60
MPFPLSFSRVLREAIEMDEAKATAMAAQHQQQLLLQQHKQQQQQQQQQTQQHQQFLLLQQ
Sbjct: 1 MPFPLSFSRVLREAIEMDEAKATAMAAQHQQQLLLQQHKQQQQQQQQQTQQHQQFLLLQQ 60
Query: 61 LQKQQQAQQQAAAISRFPSNIDAHLRPPGLHLRPGSINLHQNLNPNPAASVPNLQSNPSP 120
LQKQQQAQQQAAAISRFPSNIDAHLRPPGLHLRPGSINLHQNLNPNPAASVPNLQSNPSP
Sbjct: 61 LQKQQQAQQQAAAISRFPSNIDAHLRPPGLHLRPGSINLHQNLNPNPAASVPNLQSNPSP 120
Query: 121 TQPPSQQLQQQKQQQQQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLE 180
TQPPSQQLQQQKQQQQQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLE
Sbjct: 121 TQPPSQQLQQQKQQQQQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLE 180
Query: 181 DACERLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLA 240
DACERLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLA
Sbjct: 181 DACERLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLA 240
Query: 241 FNIITRKRTLGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAM 300
FNIITRKRTLGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAM
Sbjct: 241 FNIITRKRTLGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAM 300
Query: 301 MQTTDLTRAEPQANEMMVRGPLRTGAHVGSQSSDVRVGHSVGEQEQVHPNEMVNGWGNNN 360
MQTTDLTRAEPQANEMMVRGPLRTGAHVGSQSSDVRVGHSVGEQEQVHPNEMVNGWGNNN
Sbjct: 301 MQTTDLTRAEPQANEMMVRGPLRTGAHVGSQSSDVRVGHSVGEQEQVHPNEMVNGWGNNN 360
Query: 361 TQGDDKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR 401
TQGDDKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
Sbjct: 361 TQGDDKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR 400
BLAST of CmoCh02G010690 vs. ExPASy TrEMBL
Match:
A0A6J1JY62 (zinc finger protein 853-like OS=Cucurbita maxima OX=3661 GN=LOC111490821 PE=4 SV=1)
HSP 1 Score: 697.6 bits (1799), Expect = 3.1e-197
Identity = 383/400 (95.75%), Postives = 386/400 (96.50%), Query Frame = 0
Query: 1 MPFPLSFSRVLREAIEMDEAKATAMAAQHQQQLLLQQHKQQQQQQQQQTQQHQQFLLLQQ 60
MPFPLSFSRVLREA EMDEAKATAMAA HQQQLLLQQHK+QQQQQQQQTQQHQQFLLLQQ
Sbjct: 1 MPFPLSFSRVLREASEMDEAKATAMAAHHQQQLLLQQHKKQQQQQQQQTQQHQQFLLLQQ 60
Query: 61 LQKQQQAQQQAAAISRFPSNIDAHLRPPGLHLRPGSINLHQNLNPNPAASVPNLQSNPSP 120
LQK QQQAAAISRFPSNIDAHLRPPGLHLRPGSINLHQNLNPNP ASVPNLQSNPSP
Sbjct: 61 LQK----QQQAAAISRFPSNIDAHLRPPGLHLRPGSINLHQNLNPNPTASVPNLQSNPSP 120
Query: 121 TQPPSQQLQQQKQQQQQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLE 180
TQPPSQ LQQQK QQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLE
Sbjct: 121 TQPPSQLLQQQK---QQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLE 180
Query: 181 DACERLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLA 240
DACERLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLA
Sbjct: 181 DACERLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLA 240
Query: 241 FNIITRKRTLGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAM 300
FNIIT KRTLGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAM
Sbjct: 241 FNIITHKRTLGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAM 300
Query: 301 MQTTDLTRAEPQANEMMVRGPLRTGAHVGSQSSDVRVGHSVGEQEQVHPNEMVNGWGNNN 360
MQTTDLTRAEPQANEMMVRGP+RTGAHVGSQSS+VRVGH VGEQEQV PNEMVNGWGNNN
Sbjct: 301 MQTTDLTRAEPQANEMMVRGPIRTGAHVGSQSSNVRVGHGVGEQEQVLPNEMVNGWGNNN 360
Query: 361 TQGDDKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR 401
TQGDDKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
Sbjct: 361 TQGDDKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR 393
BLAST of CmoCh02G010690 vs. ExPASy TrEMBL
Match:
A0A6J1IDW9 (ras-interacting protein RIP3 OS=Cucurbita maxima OX=3661 GN=LOC111471787 PE=4 SV=1)
HSP 1 Score: 617.5 bits (1591), Expect = 4.0e-173
Identity = 348/386 (90.16%), Postives = 355/386 (91.97%), Query Frame = 0
Query: 17 MDEAKATAMAAQHQQQLLLQQHKQQQQQQQQQTQQHQQFLLLQQLQKQQQAQQQAAAISR 76
MDEAK AMAAQHQQQLLLQQHK QQQQQQQQTQQHQQFLLLQQLQKQQQAQQQAAAISR
Sbjct: 1 MDEAK--AMAAQHQQQLLLQQHK-QQQQQQQQTQQHQQFLLLQQLQKQQQAQQQAAAISR 60
Query: 77 FPSNIDAHLRPPGLHLRPGSINLHQ--NLNPNPAASVPNLQSNPSPTQPPSQQLQQQKQQ 136
FPSNIDAHLRPPGLHLRPGSINLHQ N NPNP SVPNLQSNPSP+QPPSQ Q
Sbjct: 61 FPSNIDAHLRPPGLHLRPGSINLHQNPNPNPNPTTSVPNLQSNPSPSQPPSQ------QS 120
Query: 137 QQQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACERLLPYHVVAD 196
QQQQQ QHQLQQRAMR+GNQAELQMAYQDAWRVCHPDIKRPFGSLEDACERLLPYHVVAD
Sbjct: 121 QQQQQHQHQLQQRAMRSGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACERLLPYHVVAD 180
Query: 197 YEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIITRKRTLGEFR 256
YEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFI TFEKQVLAFNIITRKR LGEFR
Sbjct: 181 YEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFR 240
Query: 257 SEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAMMQTTDLTRAEPQAN 316
SEERLMFEQALMQEEKR LLELKAEIELRGKA +EA DAK RMAAMMQ D TR E QAN
Sbjct: 241 SEERLMFEQALMQEEKRKLLELKAEIELRGKASKEAQDAKTRMAAMMQ-PDQTRGETQAN 300
Query: 317 EMMVRGPLRTGAHVGSQSSDVRVGHSVGEQEQVHPNEMVNGWGNNNTQGDDKEASEDLLN 376
EMMVR P+RTGAHVGSQSSDV VGH VGEQEQVHP+EM+NGWGNN TQGD+KEASEDLLN
Sbjct: 301 EMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLN 360
Query: 377 DEEAENGDTGMHDSWREVGEFDLNTR 401
DEEAENGDTGMHDSWREVGEFDLNTR
Sbjct: 361 DEEAENGDTGMHDSWREVGEFDLNTR 376
BLAST of CmoCh02G010690 vs. ExPASy TrEMBL
Match:
A0A6J1EXS9 (PH domain-containing protein DDB_G0275795-like OS=Cucurbita moschata OX=3662 GN=LOC111439565 PE=4 SV=1)
HSP 1 Score: 615.9 bits (1587), Expect = 1.2e-172
Identity = 349/391 (89.26%), Postives = 356/391 (91.05%), Query Frame = 0
Query: 17 MDEAKATAMAAQHQQQLLLQQHK---QQQQQQQQQTQQHQQFLLLQQLQKQQQAQQQAAA 76
MDEAK AMAAQHQQQLLLQQHK QQQQQQQQQTQQHQQFLLLQQLQKQQQAQQQAAA
Sbjct: 1 MDEAK--AMAAQHQQQLLLQQHKQQQQQQQQQQQQTQQHQQFLLLQQLQKQQQAQQQAAA 60
Query: 77 ISRFPSNIDAHLRPPGLHLRPGSINLHQ----NLNPNPAASVPNLQSNPSPTQPPSQQLQ 136
ISRFPSNIDAHLRPPGLHLRPGSINLHQ N NPNP SVPNLQSNPSP+QPPSQ
Sbjct: 61 ISRFPSNIDAHLRPPGLHLRPGSINLHQNPNPNPNPNPTTSVPNLQSNPSPSQPPSQ--- 120
Query: 137 QQKQQQQQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACERLLPY 196
Q QQQQQ QHQLQQRAMR+GNQAELQMAYQDAWRVCHPDIKRPFGSLEDACERLLPY
Sbjct: 121 ---QSQQQQQHQHQLQQRAMRSGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACERLLPY 180
Query: 197 HVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIITRKRT 256
HVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFI TFEKQVLAFNIITRKR
Sbjct: 181 HVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRA 240
Query: 257 LGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAMMQTTDLTRA 316
LGEFRSEERLMFEQALMQEEKR LLELKAEIELRGKA +EA DAK RMAAMMQ TD TR
Sbjct: 241 LGEFRSEERLMFEQALMQEEKRKLLELKAEIELRGKASKEAQDAKTRMAAMMQ-TDQTRG 300
Query: 317 EPQANEMMVRGPLRTGAHVGSQSSDVRVGHSVGEQEQVHPNEMVNGWGNNNTQGDDKEAS 376
E QANEMMVR P+RTGAHVGSQSSDV VGH VGEQEQVHP+EM+NGW NN TQGD+KEAS
Sbjct: 301 ETQANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWRNNTTQGDEKEAS 360
Query: 377 EDLLNDEEAENGDTGMHDSWREVGEFDLNTR 401
EDLLNDEEAENGDTGMHDSWREVGEFDLNTR
Sbjct: 361 EDLLNDEEAENGDTGMHDSWREVGEFDLNTR 382
BLAST of CmoCh02G010690 vs. ExPASy TrEMBL
Match:
A0A1S3BL97 (bromodomain-containing protein DDB_G0280777 OS=Cucumis melo OX=3656 GN=LOC103491276 PE=4 SV=1)
HSP 1 Score: 606.7 bits (1563), Expect = 7.1e-170
Identity = 346/384 (90.10%), Postives = 355/384 (92.45%), Query Frame = 0
Query: 17 MDEAKATAMAAQHQQQLLLQQHKQQQQQQQQQTQQHQQFLLLQQLQKQQQAQQQAAAISR 76
MDEAK AMAAQHQQQLLLQQHK QQQQQQQQTQQHQQFLLLQQLQKQQQAQ QAAAISR
Sbjct: 1 MDEAK--AMAAQHQQQLLLQQHK-QQQQQQQQTQQHQQFLLLQQLQKQQQAQHQAAAISR 60
Query: 77 FPSNIDAHLRPPGLHLRPGSINLHQNLNPNPAASVPNLQSNPSPTQPPSQQLQQQKQQQQ 136
FPSNIDAHLRPPGLHLRPGSINLHQN NPNP ASV NLQSNPSP+QPPSQQL QQQQ
Sbjct: 61 FPSNIDAHLRPPGLHLRPGSINLHQNPNPNPTASVSNLQSNPSPSQPPSQQL----QQQQ 120
Query: 137 QQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACERLLPYHVVADYE 196
QQQ Q QLQQRAMR GNQAELQMAYQDAWRVCHPDIKRPFGSLEDACERLLPYHVVADYE
Sbjct: 121 QQQHQLQLQQRAMRPGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACERLLPYHVVADYE 180
Query: 197 AEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIITRKRTLGEFRSE 256
AEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIITRKR LGEFRSE
Sbjct: 181 AEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIITRKRALGEFRSE 240
Query: 257 ERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAMMQTTDLTRAEPQANEM 316
ERLMFEQALMQEEKRNL ELKAEIELRGKA +EAHDAK RMAAMMQ TD TR+EPQANEM
Sbjct: 241 ERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQ-TDQTRSEPQANEM 300
Query: 317 MVRGPLRTGAHVGSQSSDVRVGHSVGEQEQVHPNEMVNGWGNNNTQGDDKEASEDLLNDE 376
M+R +RTGAHVGSQSSDV VG+QEQ HP+EM+NGWG NNTQGD+KEASEDLLNDE
Sbjct: 301 MIRASMRTGAHVGSQSSDV----PVGDQEQPHPSEMINGWG-NNTQGDEKEASEDLLNDE 360
Query: 377 EAENGDTGMHDSWREVGEFDLNTR 401
EAENGDTGMHDSWREVGEFDLNTR
Sbjct: 361 EAENGDTGMHDSWREVGEFDLNTR 371
BLAST of CmoCh02G010690 vs. NCBI nr
Match:
XP_022958641.1 (putative mediator of RNA polymerase II transcription subunit 26 [Cucurbita moschata])
HSP 1 Score: 736.9 bits (1901), Expect = 9.4e-209
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0
Query: 1 MPFPLSFSRVLREAIEMDEAKATAMAAQHQQQLLLQQHKQQQQQQQQQTQQHQQFLLLQQ 60
MPFPLSFSRVLREAIEMDEAKATAMAAQHQQQLLLQQHKQQQQQQQQQTQQHQQFLLLQQ
Sbjct: 1 MPFPLSFSRVLREAIEMDEAKATAMAAQHQQQLLLQQHKQQQQQQQQQTQQHQQFLLLQQ 60
Query: 61 LQKQQQAQQQAAAISRFPSNIDAHLRPPGLHLRPGSINLHQNLNPNPAASVPNLQSNPSP 120
LQKQQQAQQQAAAISRFPSNIDAHLRPPGLHLRPGSINLHQNLNPNPAASVPNLQSNPSP
Sbjct: 61 LQKQQQAQQQAAAISRFPSNIDAHLRPPGLHLRPGSINLHQNLNPNPAASVPNLQSNPSP 120
Query: 121 TQPPSQQLQQQKQQQQQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLE 180
TQPPSQQLQQQKQQQQQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLE
Sbjct: 121 TQPPSQQLQQQKQQQQQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLE 180
Query: 181 DACERLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLA 240
DACERLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLA
Sbjct: 181 DACERLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLA 240
Query: 241 FNIITRKRTLGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAM 300
FNIITRKRTLGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAM
Sbjct: 241 FNIITRKRTLGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAM 300
Query: 301 MQTTDLTRAEPQANEMMVRGPLRTGAHVGSQSSDVRVGHSVGEQEQVHPNEMVNGWGNNN 360
MQTTDLTRAEPQANEMMVRGPLRTGAHVGSQSSDVRVGHSVGEQEQVHPNEMVNGWGNNN
Sbjct: 301 MQTTDLTRAEPQANEMMVRGPLRTGAHVGSQSSDVRVGHSVGEQEQVHPNEMVNGWGNNN 360
Query: 361 TQGDDKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR 401
TQGDDKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
Sbjct: 361 TQGDDKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR 400
BLAST of CmoCh02G010690 vs. NCBI nr
Match:
XP_023533474.1 (SWI/SNF chromatin-remodeling complex subunit SNF5-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 722.2 bits (1863), Expect = 2.4e-204
Identity = 392/400 (98.00%), Postives = 393/400 (98.25%), Query Frame = 0
Query: 1 MPFPLSFSRVLREAIEMDEAKATAMAAQHQQQLLLQQHKQQQQQQQQQTQQHQQFLLLQQ 60
MPFPLSF RVLREA EMDEAKATAMAAQHQQQLLLQQHKQQQQQQQQ QQHQQFLLLQQ
Sbjct: 1 MPFPLSFRRVLREASEMDEAKATAMAAQHQQQLLLQQHKQQQQQQQQHQQQHQQFLLLQQ 60
Query: 61 LQKQQQAQQQAAAISRFPSNIDAHLRPPGLHLRPGSINLHQNLNPNPAASVPNLQSNPSP 120
LQKQQQAQQQAAAISRFPSNIDAHLRPPGLHLRPGSINLHQNLNPNP ASVPNLQSNPSP
Sbjct: 61 LQKQQQAQQQAAAISRFPSNIDAHLRPPGLHLRPGSINLHQNLNPNPTASVPNLQSNPSP 120
Query: 121 TQPPSQQLQQQKQQQQQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLE 180
TQPPSQQLQQQKQQQQQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLE
Sbjct: 121 TQPPSQQLQQQKQQQQQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLE 180
Query: 181 DACERLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLA 240
DACERLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLA
Sbjct: 181 DACERLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLA 240
Query: 241 FNIITRKRTLGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAM 300
FNIITRKRTLGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAM
Sbjct: 241 FNIITRKRTLGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAM 300
Query: 301 MQTTDLTRAEPQANEMMVRGPLRTGAHVGSQSSDVRVGHSVGEQEQVHPNEMVNGWGNNN 360
MQTTDLTRAEPQANEMMVRGP+RTGAHVGSQSSDVRVGH VGEQEQVHPNEMVNGWGNNN
Sbjct: 301 MQTTDLTRAEPQANEMMVRGPMRTGAHVGSQSSDVRVGHGVGEQEQVHPNEMVNGWGNNN 360
Query: 361 TQGDDKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR 401
TQGDDKEASEDLLNDEEAE GDTGMHDSWREVGEFDLNTR
Sbjct: 361 TQGDDKEASEDLLNDEEAEKGDTGMHDSWREVGEFDLNTR 400
BLAST of CmoCh02G010690 vs. NCBI nr
Match:
XP_022995207.1 (zinc finger protein 853-like [Cucurbita maxima])
HSP 1 Score: 697.6 bits (1799), Expect = 6.3e-197
Identity = 383/400 (95.75%), Postives = 386/400 (96.50%), Query Frame = 0
Query: 1 MPFPLSFSRVLREAIEMDEAKATAMAAQHQQQLLLQQHKQQQQQQQQQTQQHQQFLLLQQ 60
MPFPLSFSRVLREA EMDEAKATAMAA HQQQLLLQQHK+QQQQQQQQTQQHQQFLLLQQ
Sbjct: 1 MPFPLSFSRVLREASEMDEAKATAMAAHHQQQLLLQQHKKQQQQQQQQTQQHQQFLLLQQ 60
Query: 61 LQKQQQAQQQAAAISRFPSNIDAHLRPPGLHLRPGSINLHQNLNPNPAASVPNLQSNPSP 120
LQK QQQAAAISRFPSNIDAHLRPPGLHLRPGSINLHQNLNPNP ASVPNLQSNPSP
Sbjct: 61 LQK----QQQAAAISRFPSNIDAHLRPPGLHLRPGSINLHQNLNPNPTASVPNLQSNPSP 120
Query: 121 TQPPSQQLQQQKQQQQQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLE 180
TQPPSQ LQQQK QQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLE
Sbjct: 121 TQPPSQLLQQQK---QQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLE 180
Query: 181 DACERLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLA 240
DACERLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLA
Sbjct: 181 DACERLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLA 240
Query: 241 FNIITRKRTLGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAM 300
FNIIT KRTLGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAM
Sbjct: 241 FNIITHKRTLGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAM 300
Query: 301 MQTTDLTRAEPQANEMMVRGPLRTGAHVGSQSSDVRVGHSVGEQEQVHPNEMVNGWGNNN 360
MQTTDLTRAEPQANEMMVRGP+RTGAHVGSQSS+VRVGH VGEQEQV PNEMVNGWGNNN
Sbjct: 301 MQTTDLTRAEPQANEMMVRGPIRTGAHVGSQSSNVRVGHGVGEQEQVLPNEMVNGWGNNN 360
Query: 361 TQGDDKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR 401
TQGDDKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
Sbjct: 361 TQGDDKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR 393
BLAST of CmoCh02G010690 vs. NCBI nr
Match:
KAG6605712.1 (hypothetical protein SDJN03_03029, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 689.1 bits (1777), Expect = 2.2e-194
Identity = 378/387 (97.67%), Postives = 378/387 (97.67%), Query Frame = 0
Query: 17 MDEAKATAMAAQHQQQLLLQQHKQQQQQQQQQTQQHQQFLLLQQLQKQQQAQQQAAAISR 76
MDEAKATAMAAQHQQQLLLQQHKQQQQQ QQHQQFLLLQQLQKQQQAQQQAAAISR
Sbjct: 1 MDEAKATAMAAQHQQQLLLQQHKQQQQQ-----QQHQQFLLLQQLQKQQQAQQQAAAISR 60
Query: 77 FPSNIDAHLRPPGLHLRPGSINLHQNLNPNPAASVPNLQSNPSPTQPPSQQLQQQK---Q 136
FPSNIDAHLRPPGLHLRPGSINLHQNLNPNPAASVPNLQSNPSPTQPPSQQLQQQK Q
Sbjct: 61 FPSNIDAHLRPPGLHLRPGSINLHQNLNPNPAASVPNLQSNPSPTQPPSQQLQQQKQQQQ 120
Query: 137 QQQQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACERLLPYHVVA 196
QQQQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACERLLPYHVVA
Sbjct: 121 QQQQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACERLLPYHVVA 180
Query: 197 DYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIITRKRTLGEF 256
DYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIITRKRTLGEF
Sbjct: 181 DYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIITRKRTLGEF 240
Query: 257 RSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAMMQTTDLTRAEPQA 316
RSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAMMQTTDLTRAEPQA
Sbjct: 241 RSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAMMQTTDLTRAEPQA 300
Query: 317 NEMMVRGPLRTGAHVGSQSSDVRVGHSVGEQEQVHPNEMVNGWGNNNTQGDDKEASEDLL 376
NEMMVRGPLRTGAHVGSQSSDVRVGH VGEQEQVHPNEMVNGWGNNNTQGDDKEASEDLL
Sbjct: 301 NEMMVRGPLRTGAHVGSQSSDVRVGHGVGEQEQVHPNEMVNGWGNNNTQGDDKEASEDLL 360
Query: 377 NDEEAENGDTGMHDSWREVGEFDLNTR 401
NDEEAENGDTGMHDSWREVGEFDLNTR
Sbjct: 361 NDEEAENGDTGMHDSWREVGEFDLNTR 382
BLAST of CmoCh02G010690 vs. NCBI nr
Match:
KAG7035621.1 (hypothetical protein SDJN02_02419, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 688.0 bits (1774), Expect = 5.0e-194
Identity = 378/390 (96.92%), Postives = 378/390 (96.92%), Query Frame = 0
Query: 17 MDEAKATAMAAQHQQQLLLQQHKQQQQQQQQQTQQHQQFLLLQQLQKQQQAQQQAAAISR 76
MDEAKATAMAAQHQQQLLLQQHKQQQQQ QQHQQFLLLQQLQKQQQAQQQAAAISR
Sbjct: 1 MDEAKATAMAAQHQQQLLLQQHKQQQQQ-----QQHQQFLLLQQLQKQQQAQQQAAAISR 60
Query: 77 FPSNIDAHLRPPGLHLRPGSINLHQNLNPNPAASVPNLQSNPSPTQPPSQQLQQQK---- 136
FPSNIDAHLRPPGLHLRPGSINLHQNLNPNPAASVPNLQSNPSPTQPPSQQLQQQK
Sbjct: 61 FPSNIDAHLRPPGLHLRPGSINLHQNLNPNPAASVPNLQSNPSPTQPPSQQLQQQKQQQQ 120
Query: 137 --QQQQQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACERLLPYH 196
QQQQQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACERLLPYH
Sbjct: 121 QQQQQQQQQQQHQLQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACERLLPYH 180
Query: 197 VVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIITRKRTL 256
VVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIITRKRTL
Sbjct: 181 VVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIITRKRTL 240
Query: 257 GEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAMMQTTDLTRAE 316
GEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAMMQTTDLTRAE
Sbjct: 241 GEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAMMQTTDLTRAE 300
Query: 317 PQANEMMVRGPLRTGAHVGSQSSDVRVGHSVGEQEQVHPNEMVNGWGNNNTQGDDKEASE 376
PQANEMMVRGPLRTGAHVGSQSSDVRVGH VGEQEQVHPNEMVNGWGNNNTQGDDKEASE
Sbjct: 301 PQANEMMVRGPLRTGAHVGSQSSDVRVGHGVGEQEQVHPNEMVNGWGNNNTQGDDKEASE 360
Query: 377 DLLNDEEAENGDTGMHDSWREVGEFDLNTR 401
DLLNDEEAENGDTGMHDSWREVGEFDLNTR
Sbjct: 361 DLLNDEEAENGDTGMHDSWREVGEFDLNTR 385
BLAST of CmoCh02G010690 vs. TAIR 10
Match:
AT5G17510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 374.4 bits (960), Expect = 1.1e-103
Identity = 240/379 (63.32%), Postives = 282/379 (74.41%), Query Frame = 0
Query: 28 QHQQQLLLQQHKQQQQQQQQQTQQHQQFLLLQQLQKQQQAQQQAAAISRFPSNIDAHLRP 87
Q QQQ LL QH+ QQQQ+Q QQ LLLQQLQKQ QQQ AA+SRFPSNID HLRP
Sbjct: 17 QQQQQQLLYQHQLQQQQRQ------QQMLLLQQLQKQ---QQQQAAMSRFPSNIDVHLRP 76
Query: 88 PGL-HLRPGSINLHQNLNPNPAASVPNLQSNPSPTQPPSQQLQQQ---KQQQQQQQQQHQ 147
PGL RP + QN PNP N P QQ QQQ QQ QQQQQ Q
Sbjct: 77 PGLIQNRPINPPPQQNPTPNP---------NLGQQTPNFQQQQQQNVSSQQMMQQQQQQQ 136
Query: 148 LQQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACERLLPYHVVADYEAEEDDRI 207
QQ+ MR N ELQ AYQDAWRVCHP+ K+PF SLEDACERLLPYHVVADYEAEEDDRI
Sbjct: 137 QQQKLMRPLNHIELQCAYQDAWRVCHPNFKQPFSSLEDACERLLPYHVVADYEAEEDDRI 196
Query: 208 LDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIITRKRTLGEFRSEERLMFEQ 267
LDSDPTGQ LSRSQQWD+NI+AK++EF ATFEKQ LAFNIITRKR +GEFRSEERLM EQ
Sbjct: 197 LDSDPTGQALSRSQQWDNNIAAKVAEFTATFEKQALAFNIITRKRAMGEFRSEERLMVEQ 256
Query: 268 ALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAMMQTTDLTRAEPQAN-EMMVRGPL 327
AL+Q+E++ L+ELKAE++ R KAGREA +AK+RMAA+ Q + Q++ E+M R PL
Sbjct: 257 ALLQDERKALIELKAEMD-REKAGREAQEAKLRMAALAQA-----GQSQSHAEIMARNPL 316
Query: 328 RTGAHVGSQSSDVRVGHSVGEQ-EQVHPNEMVNGWGNNNTQGDDKEASEDLLNDEEAENG 387
R A VG+Q S++++ H +GEQ ++P+EM+NGWG NN+Q +DKE SED LNDEE ENG
Sbjct: 317 RANA-VGNQGSNIQLSHEMGEQGRNMNPDEMMNGWG-NNSQREDKEPSEDFLNDEENENG 369
Query: 388 DTGMHDSWREVGEFDLNTR 401
+TG ++WRE GEFDLN+R
Sbjct: 377 ETGEQENWREAGEFDLNSR 369
BLAST of CmoCh02G010690 vs. TAIR 10
Match:
AT3G03460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17510.1); Has 19732 Blast hits to 8747 proteins in 456 species: Archae - 0; Bacteria - 449; Metazoa - 7438; Fungi - 2099; Plants - 1550; Viruses - 53; Other Eukaryotes - 8143 (source: NCBI BLink). )
HSP 1 Score: 279.3 bits (713), Expect = 5.0e-75
Identity = 201/386 (52.07%), Postives = 239/386 (61.92%), Query Frame = 0
Query: 25 MAAQHQQQLLLQQHKQQQQQQQQQTQQHQQFLLLQQLQKQQQAQQQAAAISRFPSNIDAH 84
M QQQL QQ Q QQQQQ Q+ QQ L+Q LQKQ QQQ AA+S FP N DAH
Sbjct: 1 MEESKQQQLQQQQLLLQMQQQQQMQQRQQQLFLMQHLQKQ---QQQQAAMSMFPPNADAH 60
Query: 85 LRPPGLHLRPGSINLHQNLNPNPAASVPNLQSNPSPTQPPSQQLQQQKQQQQQQQQQHQL 144
LRPPGL QN+NPN PNL + Q QQ QQ QQQQ Q Q
Sbjct: 61 LRPPGLIPNRPVNPFLQNVNPN-----PNLIQQANKFQ--QQQQQQMMMMMQQQQLQQQQ 120
Query: 145 QQRAMRTGNQAELQMAYQDAWRVCHPDIKRPFGSLEDACERLLPYHVVADYEAEEDDRIL 204
QQ+ MR NQ E+Q AYQDAWRVCHPD KRPF SLEDACERLLPYHVVADYEAEEDD I
Sbjct: 121 QQKLMRPSNQLEIQFAYQDAWRVCHPDFKRPFASLEDACERLLPYHVVADYEAEEDDSIF 180
Query: 205 DSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIITRKRTLGEFRSEERLMFEQA 264
DS+ T Q L R QQWD+NI+AK++EF ATFE QV AF+ I +KR+ G+ R EERLM EQ
Sbjct: 181 DSNTTSQTLPRCQQWDNNIAAKVAEFTATFEGQVQAFDRIIQKRSDGD-RVEERLMMEQV 240
Query: 265 LMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAMMQTTDLTRAEPQAN---EMMVRGP 324
L+ +E+ ++L E+ +A DA++RMAA+ Q RAE EMM R P
Sbjct: 241 LLNDERNACIQLDREM--------KAQDARLRMAALAQAAGQARAEESQQSHAEMMARNP 300
Query: 325 LRTGAHVGSQSSDVRVGHSVGEQEQVHPNEM---VNGWG----NNNTQGDDKEASEDLLN 384
LR A +G+ + ++PNEM +NGWG NNN+Q ++KE ED LN
Sbjct: 301 LRANA----------IGNHGEQGRNMNPNEMMLLMNGWGNNNNNNNSQKEEKEPLEDFLN 354
Query: 385 DEEAENGDTGMHDSWREVGEFDLNTR 401
DEE ENG+ H+ WR G+FDLN R
Sbjct: 361 DEENENGE---HEKWRRSGDFDLNIR 354
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1H2M5 | 4.5e-209 | 100.00 | putative mediator of RNA polymerase II transcription subunit 26 OS=Cucurbita mos... | [more] |
A0A6J1JY62 | 3.1e-197 | 95.75 | zinc finger protein 853-like OS=Cucurbita maxima OX=3661 GN=LOC111490821 PE=4 SV... | [more] |
A0A6J1IDW9 | 4.0e-173 | 90.16 | ras-interacting protein RIP3 OS=Cucurbita maxima OX=3661 GN=LOC111471787 PE=4 SV... | [more] |
A0A6J1EXS9 | 1.2e-172 | 89.26 | PH domain-containing protein DDB_G0275795-like OS=Cucurbita moschata OX=3662 GN=... | [more] |
A0A1S3BL97 | 7.1e-170 | 90.10 | bromodomain-containing protein DDB_G0280777 OS=Cucumis melo OX=3656 GN=LOC103491... | [more] |
Match Name | E-value | Identity | Description | |
XP_022958641.1 | 9.4e-209 | 100.00 | putative mediator of RNA polymerase II transcription subunit 26 [Cucurbita mosch... | [more] |
XP_023533474.1 | 2.4e-204 | 98.00 | SWI/SNF chromatin-remodeling complex subunit SNF5-like [Cucurbita pepo subsp. pe... | [more] |
XP_022995207.1 | 6.3e-197 | 95.75 | zinc finger protein 853-like [Cucurbita maxima] | [more] |
KAG6605712.1 | 2.2e-194 | 97.67 | hypothetical protein SDJN03_03029, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7035621.1 | 5.0e-194 | 96.92 | hypothetical protein SDJN02_02419, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
AT5G17510.1 | 1.1e-103 | 63.32 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT3G03460.1 | 5.0e-75 | 52.07 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |