CmoCh02G008740 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G008740
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr02: 5314688 .. 5315144 (-)
RNA-Seq Expression	CmoCh02G008740
Synteny	CmoCh02G008740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGATATCTTGAGCCATACTAGAATATTCACCAGTGAAGATGTGTTGGAATACTCCAAGGTGAGTCACGACTCAAATCCTCTGCATTTTGATTCTGAATTAGCCCGACGTGCTGGGTTCGACGATTGTCTTGTTCGCAGGATGCTTGTTGCTTCAATGTTCCCTCATATCATTTCCGCCCATTTTGTAAGTTTAGCAAGCCAGTCTGAGTTTCTTTTAATACCATAGAATTTTAAGGGGACTGAGAAATGGCACCTGAATCTTTCTTACAACTTATAACTGTTTTGCGCTCTGTTTAAGCTGTTTTAATGTATGGTCTAGATGCTCTGATTTATGGTATATGTTGAGGATGATTGTAGCCGGGAGCTATTTACGTGTCGCAAAGCTTGAATTTCAAGTTATCAGTCTATGTTGGAGAGAAGATCATTGGCCAGGTATAGGCAATCGGCCCTAG

mRNA sequence

ATGGGAGATATCTTGAGCCATACTAGAATATTCACCAGTGAAGATGTGTTGGAATACTCCAAGGATGCTTGTTGCTTCAATGTTCCCTCATATCATTTCCGCCCATTTTCCGGGAGCTATTTACGTGTCGCAAAGCTTGAATTTCAAGTTATCAGTCTATGTTGGAGAGAAGATCATTGGCCAGGTATAGGCAATCGGCCCTAG

Coding sequence (CDS)

ATGGGAGATATCTTGAGCCATACTAGAATATTCACCAGTGAAGATGTGTTGGAATACTCCAAGGATGCTTGTTGCTTCAATGTTCCCTCATATCATTTCCGCCCATTTTCCGGGAGCTATTTACGTGTCGCAAAGCTTGAATTTCAAGTTATCAGTCTATGTTGGAGAGAAGATCATTGGCCAGGTATAGGCAATCGGCCCTAG

Protein sequence

MGDILSHTRIFTSEDVLEYSKDACCFNVPSYHFRPFSGSYLRVAKLEFQVISLCWREDHWPGIGNRP

Homology

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BLAST of CmoCh02G008740 vs. NCBI nr
Match: KAG6605524.1 (Adenylate kinase isoenzyme 6-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 59.3 bits (142), Expect = 1.5e-05
Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 0


Query: 37  SGSYLRVAKLEFQVISLCWREDHWPG 63
           +GSYLRV KLEFQV SLCWREDHWPG
Sbjct: 215 AGSYLRVTKLEFQVTSLCWREDHWPG 240

The following BLAST results are available for this feature:

BLAST of CmoCh02G008740 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh02G008740 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh02G008740 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605524.1	1.5e-05	88.46	Adenylate kinase isoenzyme 6-like protein, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of CmoCh02G008740 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G008740.1	CmoCh02G008740.1	mRNA