CmoCh02G008740 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh02G008740
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr02: 5314688 .. 5315144 (-)
RNA-Seq ExpressionCmoCh02G008740
SyntenyCmoCh02G008740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGATATCTTGAGCCATACTAGAATATTCACCAGTGAAGATGTGTTGGAATACTCCAAGGTGAGTCACGACTCAAATCCTCTGCATTTTGATTCTGAATTAGCCCGACGTGCTGGGTTCGACGATTGTCTTGTTCGCAGGATGCTTGTTGCTTCAATGTTCCCTCATATCATTTCCGCCCATTTTGTAAGTTTAGCAAGCCAGTCTGAGTTTCTTTTAATACCATAGAATTTTAAGGGGACTGAGAAATGGCACCTGAATCTTTCTTACAACTTATAACTGTTTTGCGCTCTGTTTAAGCTGTTTTAATGTATGGTCTAGATGCTCTGATTTATGGTATATGTTGAGGATGATTGTAGCCGGGAGCTATTTACGTGTCGCAAAGCTTGAATTTCAAGTTATCAGTCTATGTTGGAGAGAAGATCATTGGCCAGGTATAGGCAATCGGCCCTAG

mRNA sequence

ATGGGAGATATCTTGAGCCATACTAGAATATTCACCAGTGAAGATGTGTTGGAATACTCCAAGGATGCTTGTTGCTTCAATGTTCCCTCATATCATTTCCGCCCATTTTCCGGGAGCTATTTACGTGTCGCAAAGCTTGAATTTCAAGTTATCAGTCTATGTTGGAGAGAAGATCATTGGCCAGGTATAGGCAATCGGCCCTAG

Coding sequence (CDS)

ATGGGAGATATCTTGAGCCATACTAGAATATTCACCAGTGAAGATGTGTTGGAATACTCCAAGGATGCTTGTTGCTTCAATGTTCCCTCATATCATTTCCGCCCATTTTCCGGGAGCTATTTACGTGTCGCAAAGCTTGAATTTCAAGTTATCAGTCTATGTTGGAGAGAAGATCATTGGCCAGGTATAGGCAATCGGCCCTAG

Protein sequence

MGDILSHTRIFTSEDVLEYSKDACCFNVPSYHFRPFSGSYLRVAKLEFQVISLCWREDHWPGIGNRP
Homology
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BLAST of CmoCh02G008740 vs. NCBI nr
Match: KAG6605524.1 (Adenylate kinase isoenzyme 6-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 59.3 bits (142), Expect = 1.5e-05
Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 0 

Query: 37  SGSYLRVAKLEFQVISLCWREDHWPG 63
           +GSYLRV KLEFQV SLCWREDHWPG
Sbjct: 215 AGSYLRVTKLEFQVTSLCWREDHWPG 240

The following BLAST results are available for this feature:
BLAST of CmoCh02G008740 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh02G008740 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh02G008740 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6605524.11.5e-0588.46Adenylate kinase isoenzyme 6-like protein, partial [Cucurbita argyrosperma subsp... [more]
BLAST of CmoCh02G008740 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G008740.1CmoCh02G008740.1mRNA