Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCCGGCGAAATTTCTGACTCTGGTTATCGTCTTCCACCTCAAATCCGCCATCACCGCCGCCGACGACGCCTCCATGCCCACACCGACCTCCTGCGAGAACTGCGCCCTTTGTCAATCCGCCTGCCGTCCGCCTCCTGATGCACAACCGCTATTGCCGCCTCCACCACCGCCGCCAATTGCAGAGCCAGAGCCACTTCCGGTGCCGGTTCCCCCGGGGAACTGTCCTCCCACTATTGTCCAGTGCTGCCAGTTTATGCCGCCACCGGCACCGCCGCCGCCGCCGAATGGTAATAATATATATACGCCGTTTTATAATGAGTCGTGTTCTTCATTTTTGAAACGTGGGTTGGTCTCTGTTTTGGCCCCTGTTTTTGGGGTGGCCGCCATTTTCTGA
mRNA sequence
ATGTCTCCGGCGAAATTTCTGACTCTGGTTATCGTCTTCCACCTCAAATCCGCCATCACCGCCGCCGACGACGCCTCCATGCCCACACCGACCTCCTGCGAGAACTGCGCCCTTTGTCAATCCGCCTGCCGTCCGCCTCCTGATGCACAACCGCTATTGCCGCCTCCACCACCGCCGCCAATTGCAGAGCCAGAGCCACTTCCGGTGCCGGTTCCCCCGGGGAACTGTCCTCCCACTATTGTCCAGTGCTGCCAGTTTATGCCGCCACCGGCACCGCCGCCGCCGCCGAATGGTAATAATATATATACGCCGTTTTATAATGAGTCGTGTTCTTCATTTTTGAAACGTGGGTTGGTCTCTGTTTTGGCCCCTGTTTTTGGGGTGGCCGCCATTTTCTGA
Coding sequence (CDS)
ATGTCTCCGGCGAAATTTCTGACTCTGGTTATCGTCTTCCACCTCAAATCCGCCATCACCGCCGCCGACGACGCCTCCATGCCCACACCGACCTCCTGCGAGAACTGCGCCCTTTGTCAATCCGCCTGCCGTCCGCCTCCTGATGCACAACCGCTATTGCCGCCTCCACCACCGCCGCCAATTGCAGAGCCAGAGCCACTTCCGGTGCCGGTTCCCCCGGGGAACTGTCCTCCCACTATTGTCCAGTGCTGCCAGTTTATGCCGCCACCGGCACCGCCGCCGCCGCCGAATGGTAATAATATATATACGCCGTTTTATAATGAGTCGTGTTCTTCATTTTTGAAACGTGGGTTGGTCTCTGTTTTGGCCCCTGTTTTTGGGGTGGCCGCCATTTTCTGA
Protein sequence
MSPAKFLTLVIVFHLKSAITAADDASMPTPTSCENCALCQSACRPPPDAQPLLPPPPPPPIAEPEPLPVPVPPGNCPPTIVQCCQFMPPPAPPPPPNGNNIYTPFYNESCSSFLKRGLVSVLAPVFGVAAIF
Homology
BLAST of CmoCh01G011190 vs. ExPASy TrEMBL
Match:
A0A1S3CI95 (sperm mitochondrial-associated cysteine-rich protein-like OS=Cucumis melo OX=3656 GN=LOC103501284 PE=4 SV=1)
HSP 1 Score: 169.1 bits (427), Expect = 1.2e-38
Identity = 95/137 (69.34%), Postives = 107/137 (78.10%), Query Frame = 0
Query: 1 MSPAKFLTLVIVFHLKSAITAADDASMPTPTSCENCALCQSACRPP-PDAQPLLPPPPPP 60
M PAK L LV+VF+L SA++A DDA+M TP SC+NC +CQS CRPP + PLLPPPPPP
Sbjct: 1 MFPAKLLALVVVFNLNSAVSATDDAAMATPISCDNCTICQSTCRPPQSEPLPLLPPPPPP 60
Query: 61 --PIAEPEPLPVPVPPGNCPPTIVQCCQFMPPPAPPPPPN-GN-NIYTPFYNESCSSFLK 120
P AEPEPLP+PV P NCPPTIVQCCQF+PPP PPP GN NIYTP YNES SSFL+
Sbjct: 61 PAPYAEPEPLPIPVAPANCPPTIVQCCQFLPPPPPPPQATAGNGNIYTPIYNESSSSFLR 120
Query: 121 RGLVSVLAPVFGVAAIF 133
GL S LAPVFG+ AIF
Sbjct: 121 VGLGSALAPVFGLVAIF 137
BLAST of CmoCh01G011190 vs. ExPASy TrEMBL
Match:
A0A0A0K536 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G111300 PE=4 SV=1)
HSP 1 Score: 157.5 bits (397), Expect = 3.8e-35
Identity = 89/137 (64.96%), Postives = 103/137 (75.18%), Query Frame = 0
Query: 1 MSPAKFLTLVIVFHLKSAITAADDASMPTPTSCENCALCQSACRPPPDAQPL---LPPPP 60
M PAK L LV+VF+L +A++A DDA+MPTP SC+NC +CQS C PPP ++PL L PPP
Sbjct: 44 MFPAKLLALVVVFNLNTAVSATDDAAMPTPISCDNCTICQSTCSPPP-SEPLPLPLSPPP 103
Query: 61 PPPIAEPEPLPVPVPPGNCPPTIVQCCQFMPPPAPPPPPN--GNNIYTPFYNESCSSFLK 120
P P AEPEPLP PV P NCPPTIVQCCQF+PPP PPP N+YTP YN S SSFL+
Sbjct: 104 PSPYAEPEPLPFPVAPANCPPTIVQCCQFLPPPPPPPQATAVNGNVYTPIYNSS-SSFLR 163
Query: 121 RGLVSVLAPVFGVAAIF 133
GL S LAPVFG+ AIF
Sbjct: 164 VGLGSALAPVFGLLAIF 178
BLAST of CmoCh01G011190 vs. ExPASy TrEMBL
Match:
A0A443NET1 (Nitrile-specifier protein 5 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_00547500 PE=4 SV=1)
HSP 1 Score: 60.1 bits (144), Expect = 8.2e-06
Identity = 50/121 (41.32%), Postives = 62/121 (51.24%), Query Frame = 0
Query: 1 MSPAKFLTLVIVFHLKSAITAAD-----DASMPTPTSCENCALCQSACRPPPDAQPLLPP 60
MS K + LV + S+I A+ D ++P+P +C NC+LCQ C P P A P P
Sbjct: 6 MSCPKLVFLVSLRLSISSIIVAETPNPLDDNIPSPVACFNCSLCQYPCNPSPPATPAYQP 65
Query: 61 PPPPPIAEPEPLPVPVPPGNCPPT-IVQCCQFMPPPAPPPPPNGNNIYTPFYNESCSSFL 116
PPP P P P P NCPP+ QCCQ PP P PPPN P+YN S L
Sbjct: 66 FAPPPSPPPPPSPSMPVPSNCPPSPPSQCCQVPPPGPPHPPPN-----IPYYNYGTSPPL 121
BLAST of CmoCh01G011190 vs. ExPASy TrEMBL
Match:
A0A6A1VX00 (4Fe-4S ferredoxin-type domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR4G016275 PE=4 SV=1)
HSP 1 Score: 58.5 bits (140), Expect = 2.4e-05
Identity = 54/137 (39.42%), Postives = 65/137 (47.45%), Query Frame = 0
Query: 17 SAITAADDASMPTPTSCENCALCQSACRPP----PD----AQPLLPPPPPPPIAE----- 76
SA A +P+P++C NC LCQ C P PD P LPPPPPP +AE
Sbjct: 22 SATGEASGDVLPSPSACTNCTLCQYPCHTPAPPLPDYPLYGTPPLPPPPPPSLAEYPPYE 81
Query: 77 -PEPLPVPVPP-------GNCPP-TIVQCCQFMPPPAPPPPPNGNNIYTPFYNESCSSFL 132
P P P PP GNCPP T+VQCCQ+ PPP G Y P+ N S S
Sbjct: 82 TSSPPPPPPPPPSQLPAQGNCPPTTVVQCCQY-----PPPIAYG---YVPYNNYSASCPS 141
BLAST of CmoCh01G011190 vs. ExPASy TrEMBL
Match:
W9QFT0 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018218 PE=4 SV=1)
HSP 1 Score: 55.1 bits (131), Expect = 2.6e-04
Identity = 54/144 (37.50%), Postives = 70/144 (48.61%), Query Frame = 0
Query: 1 MSPAKFLTLVIV----FHLKSAITAADDASMPTPTSCENCALCQSAC-RPPPDAQPLL-P 60
M AK + ++ V F L A + DA +P+PT C NC +CQ C PP P
Sbjct: 1 MISAKLVFIIAVCLSAFSLCCAWENSGDA-LPSPTPCFNCTMCQYPCLSPPASGNPSYGA 60
Query: 61 PPPPPPIAEPEPLPVPVPP------GNCPPTIVQCCQFMPPPAPPPPPNGNNIYTPFYNE 120
PPPPPP P +P+PP G CPPT +QCCQ+ PPPP G +Y P YN
Sbjct: 61 PPPPPPELPGLPADIPLPPPQQPWQGKCPPTPIQCCQY-----TPPPPYG--VYVP-YNH 120
Query: 121 SCSSFLKRGLVSVLAPVFGVAAIF 133
+ L L ++ +F A F
Sbjct: 121 ALPCSLPIFLYVIMMLLFSSAVTF 135
BLAST of CmoCh01G011190 vs. NCBI nr
Match:
KAG6607747.1 (hypothetical protein SDJN03_01089, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 258.5 bits (659), Expect = 3.2e-65
Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 0
Query: 1 MSPAKFLTLVIVFHLKSAITAADDASMPTPTSCENCALCQSACRPPPDAQPLLPPPPPPP 60
MSPAKFL LVIVFHLKSAITAADDASMPTPTSCENCALCQSACRPPPDAQPLLPPPPPPP
Sbjct: 1 MSPAKFLALVIVFHLKSAITAADDASMPTPTSCENCALCQSACRPPPDAQPLLPPPPPPP 60
Query: 61 IAEPEPLPVPVPPGNCPPTIVQCCQFMPPPAPPPPPNGNNIYTPFYNESCSSFLKRGLVS 120
IAEPEPLPVPVPPGNCPPTIVQCCQFMPPPAPPPPPNGNNIYTPFYNESCSSFLKRGLVS
Sbjct: 61 IAEPEPLPVPVPPGNCPPTIVQCCQFMPPPAPPPPPNGNNIYTPFYNESCSSFLKRGLVS 120
Query: 121 VLAPVFGVAAIF 133
VLAPVFGVAAIF
Sbjct: 121 VLAPVFGVAAIF 132
BLAST of CmoCh01G011190 vs. NCBI nr
Match:
KAG7037325.1 (hypothetical protein SDJN02_00950, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 256.1 bits (653), Expect = 1.6e-64
Identity = 130/132 (98.48%), Postives = 130/132 (98.48%), Query Frame = 0
Query: 1 MSPAKFLTLVIVFHLKSAITAADDASMPTPTSCENCALCQSACRPPPDAQPLLPPPPPPP 60
MSPAKFL LVIVFHLKSAITAADDASMPTPTSCENCALCQSACRPPPDAQPLLPPPPPPP
Sbjct: 1 MSPAKFLALVIVFHLKSAITAADDASMPTPTSCENCALCQSACRPPPDAQPLLPPPPPPP 60
Query: 61 IAEPEPLPVPVPPGNCPPTIVQCCQFMPPPAPPPPPNGNNIYTPFYNESCSSFLKRGLVS 120
IAEPEPLPVPVPP NCPPTIVQCCQFMPPPAPPPPPNGNNIYTPFYNESCSSFLKRGLVS
Sbjct: 61 IAEPEPLPVPVPPANCPPTIVQCCQFMPPPAPPPPPNGNNIYTPFYNESCSSFLKRGLVS 120
Query: 121 VLAPVFGVAAIF 133
VLAPVFGVAAIF
Sbjct: 121 VLAPVFGVAAIF 132
BLAST of CmoCh01G011190 vs. NCBI nr
Match:
XP_008463043.1 (PREDICTED: sperm mitochondrial-associated cysteine-rich protein-like [Cucumis melo])
HSP 1 Score: 169.1 bits (427), Expect = 2.6e-38
Identity = 95/137 (69.34%), Postives = 107/137 (78.10%), Query Frame = 0
Query: 1 MSPAKFLTLVIVFHLKSAITAADDASMPTPTSCENCALCQSACRPP-PDAQPLLPPPPPP 60
M PAK L LV+VF+L SA++A DDA+M TP SC+NC +CQS CRPP + PLLPPPPPP
Sbjct: 1 MFPAKLLALVVVFNLNSAVSATDDAAMATPISCDNCTICQSTCRPPQSEPLPLLPPPPPP 60
Query: 61 --PIAEPEPLPVPVPPGNCPPTIVQCCQFMPPPAPPPPPN-GN-NIYTPFYNESCSSFLK 120
P AEPEPLP+PV P NCPPTIVQCCQF+PPP PPP GN NIYTP YNES SSFL+
Sbjct: 61 PAPYAEPEPLPIPVAPANCPPTIVQCCQFLPPPPPPPQATAGNGNIYTPIYNESSSSFLR 120
Query: 121 RGLVSVLAPVFGVAAIF 133
GL S LAPVFG+ AIF
Sbjct: 121 VGLGSALAPVFGLVAIF 137
BLAST of CmoCh01G011190 vs. NCBI nr
Match:
KGN44024.1 (hypothetical protein Csa_011878 [Cucumis sativus])
HSP 1 Score: 157.5 bits (397), Expect = 7.8e-35
Identity = 89/137 (64.96%), Postives = 103/137 (75.18%), Query Frame = 0
Query: 1 MSPAKFLTLVIVFHLKSAITAADDASMPTPTSCENCALCQSACRPPPDAQPL---LPPPP 60
M PAK L LV+VF+L +A++A DDA+MPTP SC+NC +CQS C PPP ++PL L PPP
Sbjct: 44 MFPAKLLALVVVFNLNTAVSATDDAAMPTPISCDNCTICQSTCSPPP-SEPLPLPLSPPP 103
Query: 61 PPPIAEPEPLPVPVPPGNCPPTIVQCCQFMPPPAPPPPPN--GNNIYTPFYNESCSSFLK 120
P P AEPEPLP PV P NCPPTIVQCCQF+PPP PPP N+YTP YN S SSFL+
Sbjct: 104 PSPYAEPEPLPFPVAPANCPPTIVQCCQFLPPPPPPPQATAVNGNVYTPIYNSS-SSFLR 163
Query: 121 RGLVSVLAPVFGVAAIF 133
GL S LAPVFG+ AIF
Sbjct: 164 VGLGSALAPVFGLLAIF 178
BLAST of CmoCh01G011190 vs. NCBI nr
Match:
XP_011659730.1 (leucine-rich repeat extensin-like protein 3 [Cucumis sativus])
HSP 1 Score: 157.5 bits (397), Expect = 7.8e-35
Identity = 89/137 (64.96%), Postives = 103/137 (75.18%), Query Frame = 0
Query: 1 MSPAKFLTLVIVFHLKSAITAADDASMPTPTSCENCALCQSACRPPPDAQPL---LPPPP 60
M PAK L LV+VF+L +A++A DDA+MPTP SC+NC +CQS C PPP ++PL L PPP
Sbjct: 1 MFPAKLLALVVVFNLNTAVSATDDAAMPTPISCDNCTICQSTCSPPP-SEPLPLPLSPPP 60
Query: 61 PPPIAEPEPLPVPVPPGNCPPTIVQCCQFMPPPAPPPPPN--GNNIYTPFYNESCSSFLK 120
P P AEPEPLP PV P NCPPTIVQCCQF+PPP PPP N+YTP YN S SSFL+
Sbjct: 61 PSPYAEPEPLPFPVAPANCPPTIVQCCQFLPPPPPPPQATAVNGNVYTPIYNSS-SSFLR 120
Query: 121 RGLVSVLAPVFGVAAIF 133
GL S LAPVFG+ AIF
Sbjct: 121 VGLGSALAPVFGLLAIF 135
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S3CI95 | 1.2e-38 | 69.34 | sperm mitochondrial-associated cysteine-rich protein-like OS=Cucumis melo OX=365... | [more] |
| A0A0A0K536 | 3.8e-35 | 64.96 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G111300 PE=4 SV=1 | [more] |
| A0A443NET1 | 8.2e-06 | 41.32 | Nitrile-specifier protein 5 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=C... | [more] |
| A0A6A1VX00 | 2.4e-05 | 39.42 | 4Fe-4S ferredoxin-type domain-containing protein OS=Morella rubra OX=262757 GN=C... | [more] |
| W9QFT0 | 2.6e-04 | 37.50 | Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018218 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAG6607747.1 | 3.2e-65 | 99.24 | hypothetical protein SDJN03_01089, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG7037325.1 | 1.6e-64 | 98.48 | hypothetical protein SDJN02_00950, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| XP_008463043.1 | 2.6e-38 | 69.34 | PREDICTED: sperm mitochondrial-associated cysteine-rich protein-like [Cucumis me... | [more] |
| KGN44024.1 | 7.8e-35 | 64.96 | hypothetical protein Csa_011878 [Cucumis sativus] | [more] |
| XP_011659730.1 | 7.8e-35 | 64.96 | leucine-rich repeat extensin-like protein 3 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
