CmoCh01G010740 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G010740
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	NAD(P)H dehydrogenase subunit M
Location	Cmo_Chr01: 8948129 .. 8949175 (-)
RNA-Seq Expression	CmoCh01G010740
Synteny	CmoCh01G010740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACCAACCATTTTCTAGGGATAAACACCAAACAACTTTCCTCCATGGCAACAGCAGCTTCATCTTACATGGTCTTTTCCATGGTGGGTTGGAAAAACGGCAAACAAAACACAAGACCCTCAGCCAGATTTCCCATCTCTGCTCAGATCAATGAAGCTGCAGAGCAACTGAAAGTGGGCGAAGAAGAAGAAGAGGCAAAGCCGAAACCACCACCGTCGCCGCTGCGACCGGTGGAAACGCAGCCAAACGTGAAGAGCAAGAACATGAGCAGAGAGTATGGAGGGCAATGGCTGAGCAGTGTGACTCGGCATGTAAGAATCTATGCAGCTTATATTGACCCTGTTACTTGTGAGTTTGATCAGACCCAAATGGATAAACTTACACTTATTTTGGATCCAAGTAATGAGTTTCTTTGGAATCCTGAAACTTGCAACAAAGTCTATGCTTACTTCCAAGAGCTTGTGGATCATTATGAGGTATCTCTCTCTCTCTCTCTCTCGGCTTGACTGATTCATGATTAATCAATTCTCTAGAATGATGACAATTCAAAGATCCATTTTATTTTACTATGTTTCTTTGTTAATATGCTCTTAATCTAACCATCATTTTAAAAATGAAAATTGAGGAAATCAGGGAGCTCCACTGACAGAATACACACTTCGCCTAATTGGTTCAGACATAGAACACTACATAAGAAAGATGCTTTATGATGGTGAAATCAAGTACAATATGAATGCAAGGGTCCTCAACTTCAGCATGGGAAAACCAAGAATTATGTTCAATAGCAACGATCTGCCTCAAGATCTACAATCATGATACTTAAAACAAATGTGAAAAGATGATCTACATATTCACTATGTTGTGTTCCAAATAGAATGCCAATTCCTCATTTTATACTCTTACATTTCTTTCCCAGTTTTGTACACATAGTTTTACCTTCAAAAGTAATGATTTCTCGACCGCAGCTTATCACATTTCCTCGACACATTCAAAGAAAACATACGAAAACAAACCATGTAACCATTGTCGACTTTTGATAATCTTGGG

mRNA sequence

AAACCAACCATTTTCTAGGGATAAACACCAAACAACTTTCCTCCATGGCAACAGCAGCTTCATCTTACATGGTCTTTTCCATGGTGGGTTGGAAAAACGGCAAACAAAACACAAGACCCTCAGCCAGATTTCCCATCTCTGCTCAGATCAATGAAGCTGCAGAGCAACTGAAAGTGGGCGAAGAAGAAGAAGAGGCAAAGCCGAAACCACCACCGTCGCCGCTGCGACCGGTGGAAACGCAGCCAAACGTGAAGAGCAAGAACATGAGCAGAGAGTATGGAGGGCAATGGCTGAGCAGTGTGACTCGGCATGTAAGAATCTATGCAGCTTATATTGACCCTGTTACTTGTGAGTTTGATCAGACCCAAATGGATAAACTTACACTTATTTTGGATCCAAGTAATGAGTTTCTTTGGAATCCTGAAACTTGCAACAAAGTCTATGCTTACTTCCAAGAGCTTGTGGATCATTATGAGGGAGCTCCACTGACAGAATACACACTTCGCCTAATTGGTTCAGACATAGAACACTACATAAGAAAGATGCTTTATGATGGTGAAATCAAGTACAATATGAATGCAAGGGTCCTCAACTTCAGCATGGGAAAACCAAGAATTATGTTCAATAGCAACGATCTGCCTCAAGATCTACAATCATGATACTTAAAACAAATGTGAAAAGATGATCTACATATTCACTATGTTGTGTTCCAAATAGAATGCCAATTCCTCATTTTATACTCTTACATTTCTTTCCCAGTTTTGTACACATAGTTTTACCTTCAAAAGTAATGATTTCTCGACCGCAGCTTATCACATTTCCTCGACACATTCAAAGAAAACATACGAAAACAAACCATGTAACCATTGTCGACTTTTGATAATCTTGGG

Coding sequence (CDS)

ATGGCAACAGCAGCTTCATCTTACATGGTCTTTTCCATGGTGGGTTGGAAAAACGGCAAACAAAACACAAGACCCTCAGCCAGATTTCCCATCTCTGCTCAGATCAATGAAGCTGCAGAGCAACTGAAAGTGGGCGAAGAAGAAGAAGAGGCAAAGCCGAAACCACCACCGTCGCCGCTGCGACCGGTGGAAACGCAGCCAAACGTGAAGAGCAAGAACATGAGCAGAGAGTATGGAGGGCAATGGCTGAGCAGTGTGACTCGGCATGTAAGAATCTATGCAGCTTATATTGACCCTGTTACTTGTGAGTTTGATCAGACCCAAATGGATAAACTTACACTTATTTTGGATCCAAGTAATGAGTTTCTTTGGAATCCTGAAACTTGCAACAAAGTCTATGCTTACTTCCAAGAGCTTGTGGATCATTATGAGGGAGCTCCACTGACAGAATACACACTTCGCCTAATTGGTTCAGACATAGAACACTACATAAGAAAGATGCTTTATGATGGTGAAATCAAGTACAATATGAATGCAAGGGTCCTCAACTTCAGCATGGGAAAACCAAGAATTATGTTCAATAGCAACGATCTGCCTCAAGATCTACAATCATGA

Protein sequence

MATAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGEEEEEAKPKPPPSPLRPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNSNDLPQDLQS

Homology

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BLAST of CmoCh01G010740 vs. ExPASy Swiss-Prot
Match: A7NVJ4 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhM PE=2 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 4.1e-78
Identity = 154/207 (74.40%), Postives = 168/207 (81.16%), Query Frame = 0


Query: 4   AASSYMV---FSMVGWKNGKQNTRPSARFPISAQIN---EAAEQLKVGEEEEEAKPKPPP 63
           A SSY     FSM+GW  GK+  R    F ISAQ     E ++Q+   EEE+E   +   
Sbjct: 3   ATSSYTACTKFSMLGWIGGKRELRKRRAFFISAQQQAEVEESQQVNAQEEEQEKMKQQGK 62

Query: 64  SPL-RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLIL 123
             L RPVE Q NVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLIL
Sbjct: 63  QKLPRPVEPQVNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLIL 122

Query: 124 DPSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYN 183
           DP+NEF+W  ETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRK+LYDGEIKYN
Sbjct: 123 DPTNEFVWTSETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKYN 182

Query: 184 MNARVLNFSMGKPRIMFNSNDLPQDLQ 204
           MNARVLNFSMGKPRI+FN + LPQ++Q
Sbjct: 183 MNARVLNFSMGKPRILFN-DGLPQNVQ 208

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BLAST of CmoCh01G010740 vs. ExPASy Swiss-Prot
Match: A9PJQ8 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Populus jackii OX=640484 GN=ndhM PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 8.0e-74
Identity = 141/202 (69.80%), Postives = 160/202 (79.21%), Query Frame = 0


Query: 4   AASSYMV---FSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGEEEEEAKPKPPPSPL 63
           A+SSYM    FSM+GW  G++  +      +S Q     ++ +    +EE K K P  P 
Sbjct: 3   ASSSYMACAKFSMLGWLGGRRELKMRRVISVSPQEQAEVQESQEVNAQEEEKVKQPVQP- 62

Query: 64  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 123
           RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDP TCEFDQTQ DKLTLILDP++
Sbjct: 63  RPVEPQVNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPETCEFDQTQTDKLTLILDPTD 122

Query: 124 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 183
           EF+W  ETC KVY+YFQELVDHYEGAPLTEYTLRLIGSDIEHYIRK+LYDGEIKYNMNAR
Sbjct: 123 EFVWTDETCYKVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKYNMNAR 182

Query: 184 VLNFSMGKPRIMFNSNDLPQDL 203
           VLNFSMGKPRI+FN++   QD+
Sbjct: 183 VLNFSMGKPRILFNNDGQLQDV 203

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BLAST of CmoCh01G010740 vs. ExPASy Swiss-Prot
Match: Q2V2S7 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhM PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 6.1e-66
Identity = 121/162 (74.69%), Postives = 141/162 (87.04%), Query Frame = 0


Query: 37  EAAEQLKVGEEEEEAKPKPPPSPLRPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAY 96
           E  E   + EE+   K K  P+PLRPVE Q NVKSK M  ++GGQWLSSVTRHVRIYAAY
Sbjct: 45  EVQETETLKEEQSTEKMKKQPTPLRPVEKQLNVKSKGMG-DFGGQWLSSVTRHVRIYAAY 104

Query: 97  IDPVTCEFDQTQMDKLTLILDPSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLI 156
           IDP TCEFDQ+QMDKLTLILDP+ EF+W+ E+CNKVY+YFQELVDHYEGAPLTEYTLRLI
Sbjct: 105 IDPETCEFDQSQMDKLTLILDPTEEFVWDDESCNKVYSYFQELVDHYEGAPLTEYTLRLI 164

Query: 157 GSDIEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNSNDL 199
           GSD+EHYIRKML+DGEI+YNM+ARVLNFSMGKPR+ FN++++
Sbjct: 165 GSDVEHYIRKMLFDGEIQYNMDARVLNFSMGKPRVQFNTSNI 205

[Close]

BLAST of CmoCh01G010740 vs. ExPASy Swiss-Prot
Match: A2XVZ1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=ndhM PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.7e-60
Identity = 126/220 (57.27%), Postives = 152/220 (69.09%), Query Frame = 0


Query: 1   MATAASSYMVFSMVGWK----NGKQNTRPSARFPISAQINEAAEQLKVGEEEEEAKPK-- 60
           MAT AS ++  + +  +          R S RFP    +    +Q +V EEEEEA  +  
Sbjct: 1   MATTASPFLSPAKLSLERRLPRATWTARRSVRFP---PVRAQDQQQQVKEEEEEAAVENL 60

Query: 61  -PPP--------------SPLRPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDP 120
            PPP               P +P+  QP  +SKNMSREYGGQWLS  TRH+RIYAAYI+P
Sbjct: 61  PPPPQEEEQRRERKTRRQGPAQPLPVQPLAESKNMSREYGGQWLSCTTRHIRIYAAYINP 120

Query: 121 VTCEFDQTQMDKLTLILDPSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSD 180
            T  FDQTQMDKLTL+LDP++EF+W  ETC KVY  FQ+LVDHYEGA L+EYTLRLIGSD
Sbjct: 121 ETNAFDQTQMDKLTLLLDPTDEFVWTDETCQKVYDEFQDLVDHYEGAELSEYTLRLIGSD 180

Query: 181 IEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNSNDLP 200
           +EH+IRK+LYDGEIKYNM +RVLNFSMGKPRI FNS+ +P
Sbjct: 181 LEHFIRKLLYDGEIKYNMMSRVLNFSMGKPRIKFNSSQIP 217

[Close]

BLAST of CmoCh01G010740 vs. ExPASy Swiss-Prot
Match: Q7FB12 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ndhM PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.7e-60
Identity = 126/220 (57.27%), Postives = 152/220 (69.09%), Query Frame = 0


Query: 1   MATAASSYMVFSMVGWK----NGKQNTRPSARFPISAQINEAAEQLKVGEEEEEAKPK-- 60
           MAT AS ++  + +  +          R S RFP    +    +Q +V EEEEEA  +  
Sbjct: 1   MATTASPFLSPAKLSLERRLPRATWTARRSVRFP---PVRAQDQQQQVKEEEEEAAVENL 60

Query: 61  -PPP--------------SPLRPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDP 120
            PPP               P +P+  QP  +SKNMSREYGGQWLS  TRH+RIYAAYI+P
Sbjct: 61  PPPPQEEEQRRERKTRRQGPAQPLPVQPLAESKNMSREYGGQWLSCTTRHIRIYAAYINP 120

Query: 121 VTCEFDQTQMDKLTLILDPSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSD 180
            T  FDQTQMDKLTL+LDP++EF+W  ETC KVY  FQ+LVDHYEGA L+EYTLRLIGSD
Sbjct: 121 ETNAFDQTQMDKLTLLLDPTDEFVWTDETCQKVYDEFQDLVDHYEGAELSEYTLRLIGSD 180

Query: 181 IEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNSNDLP 200
           +EH+IRK+LYDGEIKYNM +RVLNFSMGKPRI FNS+ +P
Sbjct: 181 LEHFIRKLLYDGEIKYNMMSRVLNFSMGKPRIKFNSSQIP 217

[Close]

BLAST of CmoCh01G010740 vs. ExPASy TrEMBL
Match: A0A6J1FIZ9 (NAD(P)H dehydrogenase subunit M OS=Cucurbita moschata OX=3662 GN=LOC111446160 PE=3 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 5.3e-113
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MATAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGEEEEEAKPKPPPSPL 60
           MATAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGEEEEEAKPKPPPSPL
Sbjct: 1   MATAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGEEEEEAKPKPPPSPL 60

Query: 61  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 120
           RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN
Sbjct: 61  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 120

Query: 121 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 180
           EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR
Sbjct: 121 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 180

Query: 181 VLNFSMGKPRIMFNSNDLPQDLQS 205
           VLNFSMGKPRIMFNSNDLPQDLQS
Sbjct: 181 VLNFSMGKPRIMFNSNDLPQDLQS 204

[Close]

BLAST of CmoCh01G010740 vs. ExPASy TrEMBL
Match: A0A6J1IX15 (NAD(P)H dehydrogenase subunit M OS=Cucurbita maxima OX=3661 GN=LOC111480680 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.2e-109
Identity = 201/204 (98.53%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MATAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGEEEEEAKPKPPPSPL 60
           M+TAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVG EEEEAKPKPP SPL
Sbjct: 1   MSTAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVG-EEEEAKPKPPLSPL 60

Query: 61  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 120
           RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN
Sbjct: 61  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 120

Query: 121 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 180
           EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR
Sbjct: 121 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 180

Query: 181 VLNFSMGKPRIMFNSNDLPQDLQS 205
           VLNFSMGKPRIMFNSNDLPQDLQS
Sbjct: 181 VLNFSMGKPRIMFNSNDLPQDLQS 203

[Close]

BLAST of CmoCh01G010740 vs. ExPASy TrEMBL
Match: A0A5D3D3P2 (NAD(P)H dehydrogenase subunit M OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002070 PE=3 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 7.5e-99
Identity = 183/205 (89.27%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 2   ATAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVG-EEEEEAKPKPPPSPL 61
           A AASSY++FSMVGWKNGKQNT+ + RFPISAQ+NEAAEQLKVG +EE++ +  P PSPL
Sbjct: 4   AAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKPSPL 63

Query: 62  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 121
           RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN
Sbjct: 64  RPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 123

Query: 122 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 181
           EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR
Sbjct: 124 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 183

Query: 182 VLNFSMGKPRIMFNSNDLPQ-DLQS 205
           VLNFSMGKPRIMFN+NDLPQ DLQS
Sbjct: 184 VLNFSMGKPRIMFNANDLPQDDLQS 208

[Close]

BLAST of CmoCh01G010740 vs. ExPASy TrEMBL
Match: A0A1S3BGV5 (NAD(P)H dehydrogenase subunit M OS=Cucumis melo OX=3656 GN=LOC103489705 PE=3 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 7.5e-99
Identity = 183/205 (89.27%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 2   ATAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVG-EEEEEAKPKPPPSPL 61
           A AASSY++FSMVGWKNGKQNT+ + RFPISAQ+NEAAEQLKVG +EE++ +  P PSPL
Sbjct: 4   AAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKPSPL 63

Query: 62  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 121
           RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN
Sbjct: 64  RPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 123

Query: 122 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 181
           EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR
Sbjct: 124 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 183

Query: 182 VLNFSMGKPRIMFNSNDLPQ-DLQS 205
           VLNFSMGKPRIMFN+NDLPQ DLQS
Sbjct: 184 VLNFSMGKPRIMFNANDLPQDDLQS 208

[Close]

BLAST of CmoCh01G010740 vs. ExPASy TrEMBL
Match: A0A0A0K5H1 (NAD(P)H dehydrogenase subunit M OS=Cucumis sativus OX=3659 GN=Csa_7G221360 PE=3 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 4.8e-98
Identity = 181/205 (88.29%), Postives = 192/205 (93.66%), Query Frame = 0


Query: 2   ATAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVG-EEEEEAKPKPPPSPL 61
           A AASSY++FSMVGWKNG QNT+ + RFPISAQINEAAEQLK G +EE++ + KP PSPL
Sbjct: 4   AAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKPSPL 63

Query: 62  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 121
           RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTL+LDPSN
Sbjct: 64  RPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLDPSN 123

Query: 122 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 181
           EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR
Sbjct: 124 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 183

Query: 182 VLNFSMGKPRIMFNSNDLPQ-DLQS 205
           VLNFSMGKPRIMFN+NDLPQ DLQS
Sbjct: 184 VLNFSMGKPRIMFNANDLPQDDLQS 208

[Close]

BLAST of CmoCh01G010740 vs. NCBI nr
Match: XP_022940621.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita moschata] >XP_023523685.1 NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6607714.1 NAD(P)H-quinone oxidoreductase subunit M, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 416.8 bits (1070), Expect = 1.1e-112
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MATAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGEEEEEAKPKPPPSPL 60
           MATAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGEEEEEAKPKPPPSPL
Sbjct: 1   MATAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGEEEEEAKPKPPPSPL 60

Query: 61  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 120
           RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN
Sbjct: 61  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 120

Query: 121 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 180
           EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR
Sbjct: 121 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 180

Query: 181 VLNFSMGKPRIMFNSNDLPQDLQS 205
           VLNFSMGKPRIMFNSNDLPQDLQS
Sbjct: 181 VLNFSMGKPRIMFNSNDLPQDLQS 204

[Close]

BLAST of CmoCh01G010740 vs. NCBI nr
Match: KAG7037286.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 408.3 bits (1048), Expect = 3.9e-110
Identity = 201/204 (98.53%), Postives = 201/204 (98.53%), Query Frame = 0


Query: 1   MATAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGEEEEEAKPKPPPSPL 60
           MATAASSYMVFSMVGWKNGKQNTRPSARFPISAQ NEAAEQLKVGEEEEEAKPKPP SPL
Sbjct: 1   MATAASSYMVFSMVGWKNGKQNTRPSARFPISAQNNEAAEQLKVGEEEEEAKPKPPRSPL 60

Query: 61  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 120
           RPVE QPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN
Sbjct: 61  RPVEMQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 120

Query: 121 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 180
           EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR
Sbjct: 121 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 180

Query: 181 VLNFSMGKPRIMFNSNDLPQDLQS 205
           VLNFSMGKPRIMFNSNDLPQDLQS
Sbjct: 181 VLNFSMGKPRIMFNSNDLPQDLQS 204

[Close]

BLAST of CmoCh01G010740 vs. NCBI nr
Match: XP_022981611.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita maxima])

HSP 1 Score: 405.6 bits (1041), Expect = 2.5e-109
Identity = 201/204 (98.53%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MATAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGEEEEEAKPKPPPSPL 60
           M+TAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVG EEEEAKPKPP SPL
Sbjct: 1   MSTAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVG-EEEEAKPKPPLSPL 60

Query: 61  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 120
           RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN
Sbjct: 61  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 120

Query: 121 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 180
           EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR
Sbjct: 121 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 180

Query: 181 VLNFSMGKPRIMFNSNDLPQDLQS 205
           VLNFSMGKPRIMFNSNDLPQDLQS
Sbjct: 181 VLNFSMGKPRIMFNSNDLPQDLQS 203

[Close]

BLAST of CmoCh01G010740 vs. NCBI nr
Match: XP_038899189.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Benincasa hispida])

HSP 1 Score: 373.6 bits (958), Expect = 1.1e-99
Identity = 182/204 (89.22%), Postives = 192/204 (94.12%), Query Frame = 0


Query: 1   MATAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGEEEEEAKPKPPPSPL 60
           MAT ASSYMVF MVGWKN KQNT+P  +FPISAQINEAAEQL +G++++E + KP PSPL
Sbjct: 1   MAT-ASSYMVFPMVGWKNSKQNTKPKPKFPISAQINEAAEQLNLGDQQKEEQGKPKPSPL 60

Query: 61  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 120
           RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN
Sbjct: 61  RPVEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 120

Query: 121 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 180
           EFLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR
Sbjct: 121 EFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 180

Query: 181 VLNFSMGKPRIMFNSNDLPQDLQS 205
           VLNFSMGKPRIMFN+NDLPQDLQS
Sbjct: 181 VLNFSMGKPRIMFNANDLPQDLQS 203

[Close]

BLAST of CmoCh01G010740 vs. NCBI nr
Match: XP_008447195.1 (PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis melo] >KAA0041980.1 NAD(P)H-quinone oxidoreductase subunit M [Cucumis melo var. makuwa] >TYK17916.1 NAD(P)H-quinone oxidoreductase subunit M [Cucumis melo var. makuwa])

HSP 1 Score: 369.8 bits (948), Expect = 1.5e-98
Identity = 183/205 (89.27%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 2   ATAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVG-EEEEEAKPKPPPSPL 61
           A AASSY++FSMVGWKNGKQNT+ + RFPISAQ+NEAAEQLKVG +EE++ +  P PSPL
Sbjct: 4   AAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKPSPL 63

Query: 62  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 121
           RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN
Sbjct: 64  RPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 123

Query: 122 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 181
           EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR
Sbjct: 124 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 183

Query: 182 VLNFSMGKPRIMFNSNDLPQ-DLQS 205
           VLNFSMGKPRIMFN+NDLPQ DLQS
Sbjct: 184 VLNFSMGKPRIMFNANDLPQDDLQS 208

[Close]

BLAST of CmoCh01G010740 vs. TAIR 10
Match: AT4G37925.1 (subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex )

HSP 1 Score: 251.9 bits (642), Expect = 4.4e-67
Identity = 121/162 (74.69%), Postives = 141/162 (87.04%), Query Frame = 0


Query: 37  EAAEQLKVGEEEEEAKPKPPPSPLRPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAY 96
           E  E   + EE+   K K  P+PLRPVE Q NVKSK M  ++GGQWLSSVTRHVRIYAAY
Sbjct: 45  EVQETETLKEEQSTEKMKKQPTPLRPVEKQLNVKSKGMG-DFGGQWLSSVTRHVRIYAAY 104

Query: 97  IDPVTCEFDQTQMDKLTLILDPSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLI 156
           IDP TCEFDQ+QMDKLTLILDP+ EF+W+ E+CNKVY+YFQELVDHYEGAPLTEYTLRLI
Sbjct: 105 IDPETCEFDQSQMDKLTLILDPTEEFVWDDESCNKVYSYFQELVDHYEGAPLTEYTLRLI 164

Query: 157 GSDIEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNSNDL 199
           GSD+EHYIRKML+DGEI+YNM+ARVLNFSMGKPR+ FN++++
Sbjct: 165 GSDVEHYIRKMLFDGEIQYNMDARVLNFSMGKPRVQFNTSNI 205

The following BLAST results are available for this feature:

BLAST of CmoCh01G010740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7NVJ4	4.1e-78	74.40	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Vitis vinifera OX=297...	[more]
A9PJQ8	8.0e-74	69.80	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Populus jackii OX=640...	[more]
Q2V2S7	6.1e-66	74.69	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Arabidopsis thaliana ...	[more]
A2XVZ1	1.7e-60	57.27	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. i...	[more]
Q7FB12	1.7e-60	57.27	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. j...	[more]

BLAST of CmoCh01G010740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FIZ9	5.3e-113	100.00	NAD(P)H dehydrogenase subunit M OS=Cucurbita moschata OX=3662 GN=LOC111446160 PE...	[more]
A0A6J1IX15	1.2e-109	98.53	NAD(P)H dehydrogenase subunit M OS=Cucurbita maxima OX=3661 GN=LOC111480680 PE=3...	[more]
A0A5D3D3P2	7.5e-99	89.27	NAD(P)H dehydrogenase subunit M OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BGV5	7.5e-99	89.27	NAD(P)H dehydrogenase subunit M OS=Cucumis melo OX=3656 GN=LOC103489705 PE=3 SV=...	[more]
A0A0A0K5H1	4.8e-98	88.29	NAD(P)H dehydrogenase subunit M OS=Cucumis sativus OX=3659 GN=Csa_7G221360 PE=3 ...	[more]

BLAST of CmoCh01G010740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940621.1	1.1e-112	100.00	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita moschata] >XP...	[more]
KAG7037286.1	3.9e-110	98.53	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic, partial [Cucurbita argy...	[more]
XP_022981611.1	2.5e-109	98.53	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita maxima]	[more]
XP_038899189.1	1.1e-99	89.22	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Benincasa hispida]	[more]
XP_008447195.1	1.5e-98	89.27	PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis melo...	[more]

BLAST of CmoCh01G010740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37925.1	4.4e-67	74.69	subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018922	NAD(P)H-quinone oxidoreductase subunit M	PFAM	PF10664	NdhM	coord: 83..191 e-value: 1.1E-45 score: 154.3
IPR018922	NAD(P)H-quinone oxidoreductase subunit M	PANTHER	PTHR36900	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT M, CHLOROPLASTIC	coord: 2..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G010740.1	CmoCh01G010740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function	GO:0048038	quinone binding