CmoCh01G007240 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGAGAATGGCCCTCGTATGATTAAGCATGTCCAAGGATGCCAACAACAACCACCTGGCCTTCCTTCCGCCCACGATCCTCCTAGATTAGGTCTTCCTTCTCCATACTATAACAGGGAATTCAATCAGCATTGAATTTTTTGCGGAATTCCGGCCATATGCATCGGAGACAAACCTTTAGCGACGGGAATTGAAGAGCTATTACTTGTAATTCGCAATTTGCTTGGCAAATCGACTCACCGTGTTATCATATTCGTATATCCATGGATTCTTCGGCTAGAATCTCCTCCTTTGTTTTTCTCTCTCATCTCCTACTTTTGTTATGCTCTCTGGTTTCAGTTTCGACTTCCAGGGCAACGGCAAGCCCTGATTACGGGAGTGAGAAAGTATCGCTTGATGTTTACTATGAATCGCTCTGTCCAGACAGCGTTAAATTTATAGTGGACAATCTGATCGAGTTGTTTGAGGGTGGACTCATCTCCATAGTTGATCTTAGATTCGTTCCCTACGGCAATGCGAGGATCAGTCGAAACAGTTCCATCACTTGTCAGGTCCTCCTTTAAATTCACCGTCTTCAGTTCCTTTTATAAACTTTTTTGTTTCGTTTGAATGAAGAGAATTATATCAGAAGTTTTTTTTCTGGATGTTCGATGGATGGAAATGAGAAGAAATAAGGATTTTATTAATATAGCATTACTGTACCTAATTTGTGAAGGAAAACCAAATCCTGTAGAAATATTCTAGTTAGGATTTTAAATCCCTTCAAACCCTATAGAAACAAACAGAGGATTATTGATGATGATTTGGTTTTGATTGACTCGAAGAACGACATTTACAGCTAAATCTAATTCTGATTAGGTATTATTTTTCTGGCCTAAGGTGGAGGAATCAGGGCAATAGTAATTATGTTTAAAGAGTAATTGTTCGATTACTTAGAATCTTGCATTAAAAATGGTGAAGCCATGCTATAATTTTTGGCTTTGGGTGGATGTGAAAGCCTAGACCTATAAATTTCTTGATCCAGATTTGATATCCCATTGCTGAAGCTGCCTTCATGGGTGTTCTTTTCATCCAACTAATCTATTCTCTTTGCTTTTAACTTATATAGATCAACTCCATTGCCTTTAATTTTTCCCAACACAATCTGAGAATCTCTTTGGGCTTATATTATGATGCCTTTGTGCATACATGGCCAATGTAACGGCCCAGACCCACCGCTAGTAGATATTGTCTTCTTTGGACTTTCCCTTTCGAGCTTCCCCTCAGGGCTTTAAAATGCGTCTCCTAGGGGAAGGTTTCCACACCCTTATAAAGGTGTTTTGTTTTCCTCCCCAACCAACGTGGGACATCACAATCCAACCCCCTTCGGGGCCCAGCGTCCTCATTGGCACTCGTTCCTTTCTCCAATCGATGCGAGACCCCCGCCAAATCCACCCCCTTTGGGACCCAACGTCCTTACTGGCACACCGCCTCGTGTCTACCCCCTTCGGGGAAGGGCGAGAAGGCTAACACATCGTTCGGTGTCTGGCTCTGATACCATTTGTAACGGCCCAGACCCACCGTTAGCAAATATGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAAACTTTAAAACGCGTCTCCTAGGGGAAGGTTTCCACATCCTTGTAAAGGTGTTTTGTTCTCCTCCCCAACCAATGTGGGACATCACAGCCAATTTCCTCATCAATGATCTTTTTAAGCTCTTCAAGAATGACCTTCATTTGAATTGTGAGTCCCGAAGAGGTGCGATTGTGACACATGTAAAAAAATCGAAAGATTCCTCCATGTTCTACGTTCTATCTATCGGTTAGCTGTACATATCATGGTTTTCTGTTTCCATTTCAAGTTGATGTTTTGTTATGCCTTTCTACATGCTGAATCCTGGAAAATATAGTAATCACACAACATACACACACATGTATGGAAATACTTGCGTTCATATGCAGACTGATGAACTTGTATTTTGTGGTGGTGATTTCAGCATGGTCCTAATGAATGTCTACTGAACACTGTGGAAGCCTGCGCTATTCATGCCTGGCCTGAGCTGGTAAGTCTTATGATGAGATCCAAATGGTCAACTGGTCTGGTTATATAACTTATTTTGGTGTGTTATATTGCTGCCAACATTCAGTCTGTTTCTTCCTTGGGGGGCCTTTTGGGTTGAGGGCCATGCGCAGGGTCGTGCGCGGGGCATTCTGGGTTGAGGGTCATGTGCGGGGTTCCTATCATAACCATTTCGAAAATGAGATTCTGAAAATCATGGTATTATATAAATGACATGTTAGCTGTAACAGCCCAAGCCCATTGCTAGCAGATATTGTGCTCTTTGGATTTTTCCTTTCGAGATTCCACAAGGTTTTTAAAACGTGTTTGCTAGGGAGAGGTTTCCACACCTTTATAAAGAATGTTTCGTTCTCCTCCCCAACCGACGTGGGATCTCACATTATCTCTTTTGATTTTCAAATTATTTAGTGGCACTTTGACTCATCGAGCAAATGAACCATATTGTTAACATACTCGATCGATCGGTTGGAATACTAAACATTTATTCAAATTTATGCAAATTTATGGACGTAGACAGGGCATTTTCCTTTTATTTTCTGTGTGGAGGCTGCAGTGTATGAGCGGAAGTATACCCAATGGGAGACTTGCTTCGAGAAATTGGGATTGCATCCTAAGCCTGTTTATGATTGCTATTCTTCAGGACTTGGGAAAGAGGTGAGTTAATTCAACCAACTCATGCATATTTCAGCATTAAATGGCAACCAGATTAACTAACCAAATCTATGAGGATTGATTGTGTTTATATGACCTGAATCATCATTTTCTATGCAGCTTGAATTACAATATGCAGCTGAAACCAACAATCTTCAGCCTCCTCATAAATACGTTCCTTGGGTGGTTGTTGATGGACAACCGCTTTATGAGGTTTGTTTTTCTCAATAACCTTATTGTCTATGATAGGTTGATCCGAAATGAGTCGCAAAATAAATGGATCTTGGAAACTAGTTTCCCGTTTTATATTCACCTTACACATCCAAACACATTCTCATTCTCAAACTTGCATAATGTCAATCACTCACGAACATGTCGAGTAGGCTTTGACTAAGCATAGGAATGAACTTAAAACAAGATTTATCATAAACTCAATGTGGATAAGCAAGCAAATCCTAAAACTTGTTTTGAATTTTCCTTAAATGTGTGTAAAACATGTTTGTTCATGAACACACCCATGGAATTTTGCCCCTTGTGGCTCGAAGCATTTCTTCTTAAGAAAGTTATGAAGCATGAAATGGGGTTTTCACAAAGTGATTGGCCATTAATTTATATACAATACACAGCTTAAGCGTTTTGATTCTAACCCAACCATACATCTAAAGCTTCTGAGGATTGCCATAATTTCCTGTTTCTGCAGGACTTTGAAAACTTCGTGAGCTATATCTGTGCGGCGTATAAAGGTTCTTCTGTGCCAAGCGCATGTAGTAAAGCTAAATCCCTTAGTTCCATTTAAAGAGGTAGAAAAGGAAAGTTCTATATGAAGTGGTGAAGATGGTAATGCTGCTGTCTCATCTGCAATAATGTTGTTGAAATTGTTTACTGAATAATAATAGCGTTATTGTTTGTAGGAAGCGTTCGTGGCATTGTCATCAACATTTAAAATCTGAGAATCCGACGTCTAAGGCTACAAAGGGAGCATTTAGATTGTCTTTATATTACTCTCGTACTTAAAAGGTTAGAGATTCGAATCTTACCTTCACATATTTTAAACTCAAGAGCATATATATATACACAAAGGCCCTCTACACTTTTCGTGTATATATCTACAATTAGTAACGATTTAATTCATACCATAAATAATCTAAGCTAATGTGTAATGTGAAATCCCGCCAATTTCTTACACGGATATTTCTTATATATCAATCAACAAG CGAGAATGGCCCTCGTATGATTAAGCATGTCCAAGGATGCCAACAACAACCACCTGGCCTTCCTTCCGCCCACGATCCTCCTAGATTAGGTCTTCCTTCTCCATACTATAACAGGGAATTCAATCAGCATTGAATTTTTTGCGGAATTCCGGCCATATGCATCGGAGACAAACCTTTAGCGACGGGAATTGAAGAGCTATTACTTGTAATTCGCAATTTGCTTGGCAAATCGACTCACCGTGTTATCATATTCGTATATCCATGGATTCTTCGGCTAGAATCTCCTCCTTTGTTTTTCTCTCTCATCTCCTACTTTTGTTATGCTCTCTGGTTTCAGTTTCGACTTCCAGGGCAACGGCAAGCCCTGATTACGGGAGTGAGAAAGTATCGCTTGATGTTTACTATGAATCGCTCTGTCCAGACAGCGTTAAATTTATAGTGGACAATCTGATCGAGTTGTTTGAGGGTGGACTCATCTCCATAGTTGATCTTAGATTCGTTCCCTACGGCAATGCGAGGATCAGTCGAAACAGTTCCATCACTTGTCAGCATGGTCCTAATGAATGTCTACTGAACACTGTGGAAGCCTGCGCTATTCATGCCTGGCCTGAGCTGACAGGGCATTTTCCTTTTATTTTCTGTGTGGAGGCTGCAGTGTATGAGCGGAAGTATACCCAATGGGAGACTTGCTTCGAGAAATTGGGATTGCATCCTAAGCCTGTTTATGATTGCTATTCTTCAGGACTTGGGAAAGAGCTTGAATTACAATATGCAGCTGAAACCAACAATCTTCAGCCTCCTCATAAATACGTTCCTTGGGTGGTTGTTGATGGACAACCGCTTTATGAGGACTTTGAAAACTTCGTGAGCTATATCTGTGCGGCGTATAAAGGTTCTTCTGTGCCAAGCGCATGTAGTAAAGCTAAATCCCTTAGTTCCATTTAAAGAGGTAGAAAAGGAAAGTTCTATATGAAGTGGTGAAGATGGAAGCGTTCGTGGCATTGTCATCAACATTTAAAATCTGAGAATCCGACGTCTAAGGCTACAAAGGGAGCATTTAGATTGTCTTTATATTACTCTCGTACTTAAAAGGTTAGAGATTCGAATCTTACCTTCACATATTTTAAACTCAAGAGCATATATATATACACAAAGGCCCTCTACACTTTTCGTGTATATATCTACAATTAGTAACGATTTAATTCATACCATAAATAATCTAAGCTAATGTGTAATGTGAAATCCCGCCAATTTCTTACACGGATATTTCTTATATATCAATCAACAAG ATGGATTCTTCGGCTAGAATCTCCTCCTTTGTTTTTCTCTCTCATCTCCTACTTTTGTTATGCTCTCTGGTTTCAGTTTCGACTTCCAGGGCAACGGCAAGCCCTGATTACGGGAGTGAGAAAGTATCGCTTGATGTTTACTATGAATCGCTCTGTCCAGACAGCGTTAAATTTATAGTGGACAATCTGATCGAGTTGTTTGAGGGTGGACTCATCTCCATAGTTGATCTTAGATTCGTTCCCTACGGCAATGCGAGGATCAGTCGAAACAGTTCCATCACTTGTCAGCATGGTCCTAATGAATGTCTACTGAACACTGTGGAAGCCTGCGCTATTCATGCCTGGCCTGAGCTGACAGGGCATTTTCCTTTTATTTTCTGTGTGGAGGCTGCAGTGTATGAGCGGAAGTATACCCAATGGGAGACTTGCTTCGAGAAATTGGGATTGCATCCTAAGCCTGTTTATGATTGCTATTCTTCAGGACTTGGGAAAGAGCTTGAATTACAATATGCAGCTGAAACCAACAATCTTCAGCCTCCTCATAAATACGTTCCTTGGGTGGTTGTTGATGGACAACCGCTTTATGAGGACTTTGAAAACTTCGTGAGCTATATCTGTGCGGCGTATAAAGGTTCTTCTGTGCCAAGCGCATGTAGTAAAGCTAAATCCCTTAGTTCCATTTAA MDSSARISSFVFLSHLLLLLCSLVSVSTSRATASPDYGSEKVSLDVYYESLCPDSVKFIVDNLIELFEGGLISIVDLRFVPYGNARISRNSSITCQHGPNECLLNTVEACAIHAWPELTGHFPFIFCVEAAVYERKYTQWETCFEKLGLHPKPVYDCYSSGLGKELELQYAAETNNLQPPHKYVPWVVVDGQPLYEDFENFVSYICAAYKGSSVPSACSKAKSLSSI Homology
BLAST of CmoCh01G007240 vs. ExPASy Swiss-Prot
Match: Q9SV73 (Gamma-interferon-responsive lysosomal thiol protein OS=Arabidopsis thaliana OX=3702 GN=GILT PE=2 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 7.3e-44 Identity = 91/217 (41.94%), Postives = 134/217 (61.75%), Query Frame = 0
BLAST of CmoCh01G007240 vs. ExPASy Swiss-Prot
Match: Q499T2 (Gamma-interferon-inducible lysosomal thiol reductase OS=Rattus norvegicus OX=10116 GN=Ifi30 PE=2 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.2e-22 Identity = 69/190 (36.32%), Postives = 100/190 (52.63%), Query Frame = 0
BLAST of CmoCh01G007240 vs. ExPASy Swiss-Prot
Match: O17861 (GILT-like protein F37H8.5 OS=Caenorhabditis elegans OX=6239 GN=F37H8.5 PE=1 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 2.7e-22 Identity = 61/195 (31.28%), Postives = 101/195 (51.79%), Query Frame = 0
BLAST of CmoCh01G007240 vs. ExPASy Swiss-Prot
Match: E7E2N8 (Gamma-interferon-inducible lysosomal thiol reductase OS=Carassius auratus OX=7957 GN=ifi30 PE=1 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 3.5e-22 Identity = 67/197 (34.01%), Postives = 105/197 (53.30%), Query Frame = 0
BLAST of CmoCh01G007240 vs. ExPASy Swiss-Prot
Match: P13284 (Gamma-interferon-inducible lysosomal thiol reductase OS=Homo sapiens OX=9606 GN=IFI30 PE=1 SV=3) HSP 1 Score: 105.9 bits (263), Expect = 6.0e-22 Identity = 67/193 (34.72%), Postives = 95/193 (49.22%), Query Frame = 0
BLAST of CmoCh01G007240 vs. ExPASy TrEMBL
Match: A0A6J1GC05 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucurbita moschata OX=3662 GN=LOC111452764 PE=3 SV=1) HSP 1 Score: 468.4 bits (1204), Expect = 1.7e-128 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
BLAST of CmoCh01G007240 vs. ExPASy TrEMBL
Match: A0A6J1KC63 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucurbita maxima OX=3661 GN=LOC111492992 PE=3 SV=1) HSP 1 Score: 459.9 bits (1182), Expect = 6.1e-126 Identity = 222/227 (97.80%), Postives = 226/227 (99.56%), Query Frame = 0
BLAST of CmoCh01G007240 vs. ExPASy TrEMBL
Match: A0A6J1DLJ0 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Momordica charantia OX=3673 GN=LOC111022039 PE=3 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 3.5e-105 Identity = 191/229 (83.41%), Postives = 207/229 (90.39%), Query Frame = 0
BLAST of CmoCh01G007240 vs. ExPASy TrEMBL
Match: A0A0A0LVM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533550 PE=3 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 8.6e-104 Identity = 192/231 (83.12%), Postives = 204/231 (88.31%), Query Frame = 0
BLAST of CmoCh01G007240 vs. ExPASy TrEMBL
Match: A0A1S3C5X1 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucumis melo OX=3656 GN=LOC103497041 PE=3 SV=1) HSP 1 Score: 380.9 bits (977), Expect = 3.6e-102 Identity = 189/231 (81.82%), Postives = 202/231 (87.45%), Query Frame = 0
BLAST of CmoCh01G007240 vs. NCBI nr
Match: XP_022949402.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita moschata] >XP_022949403.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita moschata] >XP_022949404.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita moschata] >KAG6607335.1 Gamma-interferon-responsive lysosomal thiol protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 468.4 bits (1204), Expect = 3.5e-128 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
BLAST of CmoCh01G007240 vs. NCBI nr
Match: XP_023523172.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita pepo subsp. pepo] >XP_023523173.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 462.2 bits (1188), Expect = 2.5e-126 Identity = 224/227 (98.68%), Postives = 226/227 (99.56%), Query Frame = 0
BLAST of CmoCh01G007240 vs. NCBI nr
Match: XP_022998319.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima] >XP_022998320.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima] >XP_022998321.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima] >XP_022998322.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima]) HSP 1 Score: 459.9 bits (1182), Expect = 1.3e-125 Identity = 222/227 (97.80%), Postives = 226/227 (99.56%), Query Frame = 0
BLAST of CmoCh01G007240 vs. NCBI nr
Match: KAG7037011.1 (Gamma-interferon-inducible lysosomal thiol reductase, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 458.8 bits (1179), Expect = 2.8e-125 Identity = 226/240 (94.17%), Postives = 227/240 (94.58%), Query Frame = 0
BLAST of CmoCh01G007240 vs. NCBI nr
Match: XP_038894278.1 (gamma-interferon-responsive lysosomal thiol protein-like [Benincasa hispida]) HSP 1 Score: 395.6 bits (1015), Expect = 2.9e-106 Identity = 191/227 (84.14%), Postives = 205/227 (90.31%), Query Frame = 0
BLAST of CmoCh01G007240 vs. TAIR 10
Match: AT1G07080.1 (Thioredoxin superfamily protein ) HSP 1 Score: 263.1 bits (671), Expect = 2.1e-70 Identity = 122/183 (66.67%), Postives = 143/183 (78.14%), Query Frame = 0
BLAST of CmoCh01G007240 vs. TAIR 10
Match: AT5G01580.1 (gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 203.4 bits (516), Expect = 2.0e-52 Identity = 90/180 (50.00%), Postives = 125/180 (69.44%), Query Frame = 0
BLAST of CmoCh01G007240 vs. TAIR 10
Match: AT4G12890.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 188.3 bits (477), Expect = 6.6e-48 Identity = 93/219 (42.47%), Postives = 136/219 (62.10%), Query Frame = 0
BLAST of CmoCh01G007240 vs. TAIR 10
Match: AT4G12900.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 183.7 bits (465), Expect = 1.6e-46 Identity = 93/215 (43.26%), Postives = 132/215 (61.40%), Query Frame = 0
BLAST of CmoCh01G007240 vs. TAIR 10
Match: AT4G12960.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 178.7 bits (452), Expect = 5.2e-45 Identity = 91/217 (41.94%), Postives = 134/217 (61.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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