Cmc12g0324971 (gene) Melon (Charmono) v1.1

InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Position :
0
Zoom :
x 1
ATGTCGATCAAGACTTCCAACAAAATCCTACCGGACCTGTCTAAACTTGAGCCACTCGACGGAACAAACTACCGCCGTTGGTCCCAAAAGTTGCTAATCTTCTTTGAGCAACTAGAAGTCGATTATGTCCTCACCACAGATCTCCCGACATCTGACCCCCCAACTACCACGTCAACATCCTCTGATCCAGAATCATCTACGGGACCTCTTACAGCTGTTGCTGTCACTGATCAAGTAAAGAAGGACCAAGTGATTGATCCTGAAAAATATGCAAAGGATAACAAGACCTTTCGAGGACACCTGTTAAACCATATGTCTGATCCGATGTTTGATCTCTTCGTAGTCCAAAAATCTGCCAAGGACATCTGGAGCACCCTGGAATCACGGTATGGAGGAGATGATGCTGGACGGAAAAAATATGTGGTTGGAAAATGGCTACAATTCCAGATGACTGACGACAAACCAGTCGTGGAACAAATTCATGAGTACGAGAACTTGGTGGCAAACGTCCTGTCTGAAGGCATGAAGATGTGCGAAATACTTCAAGCAAATGTCCTGTTGGAAAAATTTCCTCCATCCTGGAATGACTACCGTAATCATCTCAAGCACAAGAAGAAGGATCTAAGGCTCCCAGAACTCATCAGTCATATGCGCACGGAAGAAGCCAACAGACTGAAAGATAAGTTAGCCTCCCAAAATTTAAATTCAGTTAATGCTAACTTAGTCGAATCATCCTTTGTGAACAGAGATAGAACGAAGCAGGAAAAAGGACATAAAGGGAAAAACTCAGAAAAGAGACAATTCAAGACCACTGGGGGACAAATAAAGAAGAAAAAGCTGGTCTGCTACGTGTGCGGAAAGGAAGGGCACAAATCATACCAGTGCAACCAGAGGAAAGGGAGGCCAAGTCAGAAACCAACACCTCAAGCCAATCTAGCAGAGCAAGACAGTGAGATCATAGCAGCCATAGTAGAAGCCAATCTGATAGAAAACAAGACGGACTGGATTCTCGACACTGGAGCCTCGAGACACTTCTGCACCAATCGTGAACTACTCCATGACTACGAAGACACTGCTGATGGAGAATGCGTGTTCATGGGAAACTCAGCCACTGCAGGAGTAATCGGGAAAGGGAAGGTTATTTTAAAGTTAACTTCTGGCAAAACTTTATCTTTAAGTAATGTTCTATATGTCCCTTCCCTACGTAGGAACCTGGTGTCTGGGAGTCTGTTGAATCGGGCCGGGCTTAAAATTGTGCTAGAAGGTGACAAAGTTGTCCTCACGAAAAATGGAGATTTTGTCGGTAAGGGGTATCTGTCTAATGGCCTGTTTGTGCTAAACACGATTTCTATGAATGCAAATGCTTCCAGTTCTGCTTACTTGATTGAATCTGCAAACTTATGGCATGGTAGACTAGGACATGTGAACTTTGCATCAATTAGAAAACTTAAAGACATGAGACTCATTAATACCTCTGAGACGCATGAAACTGGTAAATGTTCTATTTGCATAGAAAGTAAATTCCATAAGAAGCCCTTCAAACCAGTTGAATATAGAACTACTGAGCTGTTAGAATTAATTCACTCAGATCTAGCCGACTTTAGAACCACTGCCAGTAGAGGTGGTAAAAACTACTATGTATCCTTTGTTGATGATTACTCTAGATTCACTAAGATATACCTGATAAGAACAAAAAATGAAGCTGCCAGTATGTTTATAAAATTCAAGGCAGAATCTGAGAATCAGTTAGGAAAAAGGATAAAAAGATTAAGATCAGATAGAGGTGGTGAGTATTCCGATAAAACTCTTAAAGAATTTTGTGAATCAAATGGTATCATCCATGAATTTACTGCACCCTACTCACCACAACAAAATGGCATAGCAGAACGAAAAAATAGAACTCTTAAAGAAATGATGAATGCCATGTTATTAAGCTCTGGTCTATCTGATAATATGTGGGGGGAAGCCGTGTTGTCTGCATGTTTTATTCTTAACAGGATTCCCCACAAAAGGCTAGACAAAACTCCATACGAACTCTGGAAAGGACATGCACCAAATCTTTCCTACCTCAAGGTCTGGGGATGCTTGGCTAAGGTACCACTTCCTGCATTGAAGAAAACTACGGTAGGACCTAAAACCTTTGACTGCATTTTTATCGGGTATGCTCAAAATAGTGCTGCATATAGGTTTATGTGTTTAAATGACAAAACTATAAATGAATCTAGAGATGCAAAATTCTTTGAGCATGTTTTTCCGTTAAAACAATCATTGTATGCTCCTAGCCTTTCTAACAGAATGCATGATCCTGAAATCATTAGTGAAATACCTGTTTCTGAAACTGTTGATACACCAAACCTAAGTTGTGAATTAGAACCTAGGAGAAGTAAAAGACAAAGAACTGAGAAAAGTTTCGGTCCAGATTTCCTAAGCACCTTCATAGTGGAAAGGCGTGATGAAATTGACTGTAACTTCACAAACTTGTTCTTAATAGATGAGGATCCTAAAACTTACCAAGAAGCGCTAAACTCTGTAGATTCAAGGATGTGGAAAGAGGCCATTAAAAGTGAATTGGACTCACTGGCCATGAATCATACATGGGAACTGGTGGATCTTCCCATGGGAAACAAGCCAATTAGATGTAAGTGGATCTTTAAAAGGAAAACAAAACCAAATGGATTAATAGAAAGATACAAGGCTAGATTAGTGGTAGTAGGATATACCCAAAAACAAGGTGTTGACTATTTCGACACCTATTCCCCTGTAACTAAGATAACCACAATTAGGGCCTTGATTGCTTTGGCCGCAATACATAATCTTCTTATTCATCAAATGGACGTAAAAACAGCCTTTTTAAATGGCAACTTAGAAGAAGAAATTTATATGACACAACCAGAAGGCTTTAAAATCTCTGGGCAAGAAAACAAAGTGTGTAAATTGAGAAAGTCCCTATACGGTCTCAAACAAGCTCCCAAACAGTGGTACGAAAAATTTAACAACACGTTGATAACCAATGGATTTAAAATAAATTCCTCTGACACGTGTGTTTATTCAAAGATGGTTGGAGCTGATTGCATATTAATATGTCTATACGTTGACGACATGTTAATCTTTGGAACAAACATGGAGCTAATAACTGACACTAAATATTTCCTCTCGTCACACTTTGAAATGAAAGACCTGGGAGAAGCAGACGTAATTCTAGGTGTTAAAATCAGGAAAAACAAAACCAGTTTGTCTCTGTGTCAATCCCATTACGTAGAGAAAATACTAAAGAAGTTTGACTCCTTTGATGTTTCTCCTGTGAGAACTCCCTTTGATGCTAGTAAACATCTTAAGAAGAATAAAGGAGATAGTGTGTCTCAACCAGAATATGCAAAGATCATCGGCAGTGTGATGTATTTAATGAACTACACTAGACCAGATATTGCATATGCTGTCAGTAGATTGAGTAGATATACACACAATCCTAATAGATACCACTGGGATGCCTTGCACCATCTGTTGAGATATCTTAAAGGAACGATAGATTACTGTCTACACTTCAAGAAATTCCCTGCCGTGCTAGAAGGATATTGTGATGCAAACTGGGTCACAGACAATGATGAGGTTAACTCCACTAGTGGGTATGTATTTTTACTCGGAGGTGGAGCTATATCTTGGAAGTCTACAAAACAGACTTGTATAGCCAGATCCACGATGGAATCCGAGTTCATAGCACTAGAGTTGGCAGGACAGGAGGCTGAGTGGATCAAAAACCTACTAGGAGATGTACCATTGTGGGGGACATCTGTACCGGTGTCCATACAGTGTGATTCGCAAGCCGCGATATGTACTGCCAAGAACAGTGTTTATAATGGTAAAAGTAGACACGTACGTCTCAGGCATGCAGTAGTAAAACAACTGCTAAAGGAAGGAACATCTCCTTGGAATTTGTTCGATCTGAAAAGAACTTGGCTGATCCTTTAA500100015002000250030003500Score = 9.504374Expect = 1.4E-16 / Score = 60.5Score = Score = Score = Score = Score = Score = Score = Expect = 1.69956E-45 / Score = 158.4Expect = 1.5E-44 / Score = 153.6Expect = 6.7E-80 / Score = 268.2Expect = 1.7E-11 / Score = 43.8Expect = 5.1E-14 / Score = 52.4Score = 25.835152Score = Score = Score = SequenceSM00343PS50158PF14223mobidb-litemobidb-litemobidb-litemobidb-litemobidb-litemobidb-litePTHR45895cd09272G3DSA:3.30.420.10PF07727PF13976PF00665PS50994SSF57756SSF53098SSF56672
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 281..297
e-value: 0.0059
score: 25.0
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 282..297
score: 9.504374
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 93..224
e-value: 1.4E-16
score: 60.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 296..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..312
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 335..1214
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 1189..1306
e-value: 1.69956E-45
score: 158.4
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 517..692
e-value: 1.5E-44
score: 153.6
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 863..1105
e-value: 6.7E-80
score: 268.2
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 442..507
e-value: 1.7E-11
score: 43.8
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 524..622
e-value: 5.1E-14
score: 52.4
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 511..684
score: 25.835152
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 265..303
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 525..692
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 863..1293