Cmc11g0291001 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0291001
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
LocationCMiso1.1chr11: 6359218 .. 6359577 (+)
RNA-Seq ExpressionCmc11g0291001
SyntenyCmc11g0291001
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATCTTGCTAATAGCACAAGACCAGATATAGCATTTTCAGTAAATTTGTTATCAAGATATAGTTCTTTTCCAACAAAAAGACATTGGAATGAAGTTAAGCATGTACTTCGTTATCTTCAAGGGATAATTGATATGGGTTTGTTATATTCAAATACATCAAACTTTAATTTAGTTGGTTATGCGGATGCTGGATATTTACCTGATCCACACAAAGCAAGATCTCAAACAGGTTATCTGTTTACATGTGGAGGAACTGTTATATCTTGGCGGTCTGTAAAGAAAACCATGACGGCCACTTCATCAATCATGCAGAAATTCTTGCAATTCATGAAGCTAGTAGAGAATGTGTATGGTTGA

mRNA sequence

ATGTATCTTGCTAATAGCACAAGACCAGATATAGCATTTTCAGTAAATTTGTTATCAAGATATAGTTCTTTTCCAACAAAAAGACATTGGAATGAAGTTAAGCATGTACTTCGTTATCTTCAAGGGATAATTGATATGGGTTTGTTATATTCAAATACATCAAACTTTAATTTAGTTGGTTATGCGGATGCTGGATATTTACCTGATCCACACAAAGCAAGATCTCAAACAGGTTATCTGTTTACATGTGGAGGAACTGTTATATCTTGGCGGTCTGTAAAGAAAACCATGACGGCCACTTCATCAATCATGCAGAAATTCTTGCAATTCATGAAGCTAGTAGAGAATGTGTATGGTTGA

Coding sequence (CDS)

ATGTATCTTGCTAATAGCACAAGACCAGATATAGCATTTTCAGTAAATTTGTTATCAAGATATAGTTCTTTTCCAACAAAAAGACATTGGAATGAAGTTAAGCATGTACTTCGTTATCTTCAAGGGATAATTGATATGGGTTTGTTATATTCAAATACATCAAACTTTAATTTAGTTGGTTATGCGGATGCTGGATATTTACCTGATCCACACAAAGCAAGATCTCAAACAGGTTATCTGTTTACATGTGGAGGAACTGTTATATCTTGGCGGTCTGTAAAGAAAACCATGACGGCCACTTCATCAATCATGCAGAAATTCTTGCAATTCATGAAGCTAGTAGAGAATGTGTATGGTTGA

Protein sequence

MYLANSTRPDIAFSVNLLSRYSSFPTKRHWNEVKHVLRYLQGIIDMGLLYSNTSNFNLVGYADAGYLPDPHKARSQTGYLFTCGGTVISWRSVKKTMTATSSIMQKFLQFMKLVENVYG
Homology
BLAST of Cmc11g0291001 vs. NCBI nr
Match: KAA0038947.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK11197.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 187.6 bits (475), Expect = 6.3e-44
Identity = 88/102 (86.27%), Postives = 95/102 (93.14%), Query Frame = 0

Query: 1   MYLANSTRPDIAFSVNLLSRYSSFPTKRHWNEVKHVLRYLQGIIDMGLLYSNTSNFNLVG 60
           MYLAN+TRPDI+FSVNLL+RYSS PTKRHWNEVKHVLRYL+G ID+GL YSN SNF+LVG
Sbjct: 47  MYLANNTRPDISFSVNLLARYSSSPTKRHWNEVKHVLRYLRGTIDIGLFYSNKSNFDLVG 106

Query: 61  YADAGYLPDPHKARSQTGYLFTCGGTVISWRSVKKTMTATSS 103
           YADAGYL DP KARSQTGYLFTCGGT ISWRSVK+TMTATSS
Sbjct: 107 YADAGYLSDPRKARSQTGYLFTCGGTAISWRSVKQTMTATSS 148

BLAST of Cmc11g0291001 vs. NCBI nr
Match: TYK21506.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 183.3 bits (464), Expect = 1.2e-42
Identity = 87/102 (85.29%), Postives = 93/102 (91.18%), Query Frame = 0

Query: 1   MYLANSTRPDIAFSVNLLSRYSSFPTKRHWNEVKHVLRYLQGIIDMGLLYSNTSNFNLVG 60
           MYLAN+TRPDIAFSVNLL+RYS  PTKRHWN VKHVLRYL+G IDMGL YSN SNF+LVG
Sbjct: 37  MYLANNTRPDIAFSVNLLARYSYSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVG 96

Query: 61  YADAGYLPDPHKARSQTGYLFTCGGTVISWRSVKKTMTATSS 103
           YADAG+L DPHKARSQTGYLFTC GT ISWRSVK+TMTATSS
Sbjct: 97  YADAGHLSDPHKARSQTGYLFTCEGTAISWRSVKQTMTATSS 138

BLAST of Cmc11g0291001 vs. NCBI nr
Match: KAA0067250.1 (Pol [Cucumis melo var. makuwa] >TYK10859.1 Pol [Cucumis melo var. makuwa])

HSP 1 Score: 174.9 bits (442), Expect = 4.2e-40
Identity = 85/102 (83.33%), Postives = 90/102 (88.24%), Query Frame = 0

Query: 1   MYLANSTRPDIAFSVNLLSRYSSFPTKRHWNEVKHVLRYLQGIIDMGLLYSNTSNFNLVG 60
           M LAN+TRPDIAFSVNLL+RYSS PTKRHWN VKHVLRYL+G IDM L YSN SNF+LVG
Sbjct: 47  MCLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVG 106

Query: 61  YADAGYLPDPHKARSQTGYLFTCGGTVISWRSVKKTMTATSS 103
           YADAGYL DP KARSQ GYLFT GGT ISWRSVK+TMTATSS
Sbjct: 107 YADAGYLSDPDKARSQIGYLFTWGGTAISWRSVKQTMTATSS 148

BLAST of Cmc11g0291001 vs. NCBI nr
Match: KAF7137709.1 (hypothetical protein RHSIM_Rhsim07G0041900 [Rhododendron simsii])

HSP 1 Score: 171.0 bits (432), Expect = 6.1e-39
Identity = 78/102 (76.47%), Postives = 88/102 (86.27%), Query Frame = 0

Query: 1    MYLANSTRPDIAFSVNLLSRYSSFPTKRHWNEVKHVLRYLQGIIDMGLLYSNTSNFNLVG 60
            MYLAN TRPDIAFSVNLL+RYSS PT+RHW  +KH+ RYL+G ID+GL YSN S   L+G
Sbjct: 986  MYLANCTRPDIAFSVNLLARYSSAPTQRHWKGIKHIFRYLRGTIDLGLFYSNGSASQLIG 1045

Query: 61   YADAGYLPDPHKARSQTGYLFTCGGTVISWRSVKKTMTATSS 103
            YADAGYL DPHKARSQTGY+FTCGG  ISWRSVK+T+TATSS
Sbjct: 1046 YADAGYLSDPHKARSQTGYVFTCGGAAISWRSVKQTLTATSS 1087

BLAST of Cmc11g0291001 vs. NCBI nr
Match: CAA7029940.1 (unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 171.0 bits (432), Expect = 6.1e-39
Identity = 80/119 (67.23%), Postives = 93/119 (78.15%), Query Frame = 0

Query: 1   MYLANSTRPDIAFSVNLLSRYSSFPTKRHWNEVKHVLRYLQGIIDMGLLYSNTSNFNLVG 60
           MYLAN TRPDIAF+ NLL+RYSS PT+RHWN +KH+ RYLQG I+ GL YS      LVG
Sbjct: 149 MYLANCTRPDIAFATNLLARYSSSPTRRHWNGIKHIFRYLQGTIEFGLYYSRNPEVGLVG 208

Query: 61  YADAGYLPDPHKARSQTGYLFTCGGTVISWRSVKKTMTATSSIMQKFLQFMKLVENVYG 120
           +ADAGYL DPHKARSQTGY+FT GGT ISWRS K+T+ ATSS   + +  MK VE+VYG
Sbjct: 209 FADAGYLSDPHKARSQTGYVFTYGGTAISWRSQKQTLVATSSNYAEIIALMKHVESVYG 267

BLAST of Cmc11g0291001 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.8e-18
Identity = 46/108 (42.59%), Postives = 63/108 (58.33%), Query Frame = 0

Query: 1   MYLANSTRPDIAFSVNLLSRYSSFPTKRHWNEVKHVLRYLQGIIDMGLLYSNTSNFNLVG 60
           MYL   TRPD+A +V +LS+++S P   HW  +K VLRYLQ     GL ++      LVG
Sbjct: 14  MYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYGLEFTRAGTAKLVG 73

Query: 61  YADAGYLPDPHKARSQTGYLFTCGGTVISWRSVKKTMTATSSIMQKFL 109
           Y+DA +  D    RS +GYLF   G  +SWRS K+   A SS   +++
Sbjct: 74  YSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYM 121

BLAST of Cmc11g0291001 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.1e-14
Identity = 43/108 (39.81%), Postives = 58/108 (53.70%), Query Frame = 0

Query: 1    MYLANSTRPDIAFSVNLLSRYSSFPTKRHWNEVKHVLRYLQGIIDMGLLYSNTSNFNLVG 60
            MY    TRPDIA +V ++SR+   P K HW  VK +LRYL+G     L +  +    L G
Sbjct: 1119 MYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPI-LKG 1178

Query: 61   YADAGYLPDPHKARSQTGYLFTCGGTVISWRSVKKTMTATSSIMQKFL 109
            Y DA    D    +S TGYLFT  G  ISW+S  +   A S+   +++
Sbjct: 1179 YTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYI 1225

BLAST of Cmc11g0291001 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 9.2e-14
Identity = 42/101 (41.58%), Postives = 55/101 (54.46%), Query Frame = 0

Query: 2    YLANSTRPDIAFSVNLLSRYSSFPTKRHWNEVKHVLRYLQGIIDMGLLYSNTSNFNLVGY 61
            YLA  TRPD++++VN LS+Y   PT  HWN +K VLRYL G  D G+     +  +L  Y
Sbjct: 1237 YLA-FTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAY 1296

Query: 62   ADAGYLPDPHKARSQTGYLFTCGGTVISWRSVKKTMTATSS 103
            +DA +  D     S  GY+   G   ISW S K+     SS
Sbjct: 1297 SDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSS 1336

BLAST of Cmc11g0291001 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 77.4 bits (189), Expect = 1.2e-13
Identity = 42/117 (35.90%), Postives = 63/117 (53.85%), Query Frame = 0

Query: 1    MYLANSTRPDIAFSVNLLSRYSSFPTKRHWNEVKHVLRYLQGIIDMGLLYSNTSNF--NL 60
            MY+   TRPD+  +VN+LSRYSS      W  +K VLRYL+G IDM L++     F   +
Sbjct: 1189 MYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKI 1248

Query: 61   VGYADAGYLPDPHKARSQTGYLFTC-GGTVISWRSVKKTMTATSSIMQKFLQFMKLV 115
            +GY D+ +       +S TGYLF      +I W + ++   A SS   +++   + V
Sbjct: 1249 IGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAV 1305

BLAST of Cmc11g0291001 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.3e-11
Identity = 38/101 (37.62%), Postives = 54/101 (53.47%), Query Frame = 0

Query: 2    YLANSTRPDIAFSVNLLSRYSSFPTKRHWNEVKHVLRYLQGIIDMGLLYSNTSNFNLVGY 61
            YLA  TRPDI+++VN LS++   PT+ H   +K +LRYL G  + G+     +  +L  Y
Sbjct: 1254 YLA-FTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAY 1313

Query: 62   ADAGYLPDPHKARSQTGYLFTCGGTVISWRSVKKTMTATSS 103
            +DA +  D     S  GY+   G   ISW S K+     SS
Sbjct: 1314 SDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSS 1353

BLAST of Cmc11g0291001 vs. ExPASy TrEMBL
Match: A0A5D3CGU0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00370 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.1e-44
Identity = 88/102 (86.27%), Postives = 95/102 (93.14%), Query Frame = 0

Query: 1   MYLANSTRPDIAFSVNLLSRYSSFPTKRHWNEVKHVLRYLQGIIDMGLLYSNTSNFNLVG 60
           MYLAN+TRPDI+FSVNLL+RYSS PTKRHWNEVKHVLRYL+G ID+GL YSN SNF+LVG
Sbjct: 47  MYLANNTRPDISFSVNLLARYSSSPTKRHWNEVKHVLRYLRGTIDIGLFYSNKSNFDLVG 106

Query: 61  YADAGYLPDPHKARSQTGYLFTCGGTVISWRSVKKTMTATSS 103
           YADAGYL DP KARSQTGYLFTCGGT ISWRSVK+TMTATSS
Sbjct: 107 YADAGYLSDPRKARSQTGYLFTCGGTAISWRSVKQTMTATSS 148

BLAST of Cmc11g0291001 vs. ExPASy TrEMBL
Match: A0A5D3DD63 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold518G00010 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.8e-43
Identity = 87/102 (85.29%), Postives = 93/102 (91.18%), Query Frame = 0

Query: 1   MYLANSTRPDIAFSVNLLSRYSSFPTKRHWNEVKHVLRYLQGIIDMGLLYSNTSNFNLVG 60
           MYLAN+TRPDIAFSVNLL+RYS  PTKRHWN VKHVLRYL+G IDMGL YSN SNF+LVG
Sbjct: 37  MYLANNTRPDIAFSVNLLARYSYSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVG 96

Query: 61  YADAGYLPDPHKARSQTGYLFTCGGTVISWRSVKKTMTATSS 103
           YADAG+L DPHKARSQTGYLFTC GT ISWRSVK+TMTATSS
Sbjct: 97  YADAGHLSDPHKARSQTGYLFTCEGTAISWRSVKQTMTATSS 138

BLAST of Cmc11g0291001 vs. ExPASy TrEMBL
Match: A0A5D3CKU4 (Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00300 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.1e-40
Identity = 85/102 (83.33%), Postives = 90/102 (88.24%), Query Frame = 0

Query: 1   MYLANSTRPDIAFSVNLLSRYSSFPTKRHWNEVKHVLRYLQGIIDMGLLYSNTSNFNLVG 60
           M LAN+TRPDIAFSVNLL+RYSS PTKRHWN VKHVLRYL+G IDM L YSN SNF+LVG
Sbjct: 47  MCLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVG 106

Query: 61  YADAGYLPDPHKARSQTGYLFTCGGTVISWRSVKKTMTATSS 103
           YADAGYL DP KARSQ GYLFT GGT ISWRSVK+TMTATSS
Sbjct: 107 YADAGYLSDPDKARSQIGYLFTWGGTAISWRSVKQTMTATSS 148

BLAST of Cmc11g0291001 vs. ExPASy TrEMBL
Match: A0A2N9HZ23 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44862 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 6.0e-40
Identity = 82/102 (80.39%), Postives = 88/102 (86.27%), Query Frame = 0

Query: 1   MYLANSTRPDIAFSVNLLSRYSSFPTKRHWNEVKHVLRYLQGIIDMGLLYSNTSNFNLVG 60
           MYLAN TRPDIAFSVNLL+RYSS PT RHWN VKHVLRYL+G+ DMGL Y N SN  LVG
Sbjct: 510 MYLANCTRPDIAFSVNLLARYSSAPTLRHWNGVKHVLRYLRGMTDMGLFYLNKSNSQLVG 569

Query: 61  YADAGYLPDPHKARSQTGYLFTCGGTVISWRSVKKTMTATSS 103
           YADAGYL DPHK RSQTGYLFTCG T ISWRSVK+T++ATSS
Sbjct: 570 YADAGYLSDPHKGRSQTGYLFTCGNTAISWRSVKQTISATSS 611

BLAST of Cmc11g0291001 vs. ExPASy TrEMBL
Match: A0A2N9J4G7 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59221 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.3e-39
Identity = 82/102 (80.39%), Postives = 87/102 (85.29%), Query Frame = 0

Query: 1   MYLANSTRPDIAFSVNLLSRYSSFPTKRHWNEVKHVLRYLQGIIDMGLLYSNTSNFNLVG 60
           MYLAN TRPDIAFSVNLL+RYSS PT RHWN VKHVLRYL+G  DMGL Y N SN  LVG
Sbjct: 566 MYLANCTRPDIAFSVNLLARYSSAPTLRHWNGVKHVLRYLRGTTDMGLFYPNKSNPQLVG 625

Query: 61  YADAGYLPDPHKARSQTGYLFTCGGTVISWRSVKKTMTATSS 103
           YADAGYL DPHK RSQTGYLFTCG T ISWRSVK+T++ATSS
Sbjct: 626 YADAGYLSDPHKGRSQTGYLFTCGNTAISWRSVKQTISATSS 667

BLAST of Cmc11g0291001 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 72.0 bits (175), Expect = 3.6e-13
Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = 0

Query: 1   MYLANSTRPDIAFSVNLLSRYSSFPTKRHWNEVKHVLRYLQGIIDMGLLYSNTSNFNLVG 60
           MYL   TR DI+F+VN LS++S  P   H   V  +L Y++G +  GL YS+ +   L  
Sbjct: 386 MYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV 445

Query: 61  YADAGYLPDPHKARSQTGYLFTCGGTVISWRSVKKTMTATSS 103
           ++DA +       RS  GY    G ++ISW+S K+ + + SS
Sbjct: 446 FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSS 486

BLAST of Cmc11g0291001 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 62.4 bits (150), Expect = 2.9e-10
Identity = 33/79 (41.77%), Postives = 45/79 (56.96%), Query Frame = 0

Query: 1  MYLANSTRPDIAFSVNLLSRYSSFPTKRHWNEVKHVLRYLQGIIDMGLLYSNTSNFNLVG 60
          MYL   TRPD+ F+VN LS++SS         V  VL Y++G +  GL YS TS+  L  
Sbjct: 1  MYL-TITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 60

Query: 61 YADAGYLPDPHKARSQTGY 80
          +AD+ +   P   RS TG+
Sbjct: 61 FADSDWASCPDTRRSVTGF 78

BLAST of Cmc11g0291001 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 6.4e-10
Identity = 31/96 (32.29%), Postives = 52/96 (54.17%), Query Frame = 0

Query: 7   TRPDIAFSVNLLSRYSSFPTKRHWNEVKHVLRYLQGIIDMGLLYSNTSNFNLVGYADAGY 66
           TRPDI+++VN++ +    PT   ++ +K VLRY++G I  GL     S  N+  + D+ +
Sbjct: 113 TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDW 172

Query: 67  LPDPHKARSQTGYLFTCGGTVISWRSVKKTMTATSS 103
                  RS TG+    G  +ISW + ++   + SS
Sbjct: 173 AGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSS 208

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0038947.16.3e-4486.27Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
TYK21506.11.2e-4285.29Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0067250.14.2e-4083.33Pol [Cucumis melo var. makuwa] >TYK10859.1 Pol [Cucumis melo var. makuwa][more]
KAF7137709.16.1e-3976.47hypothetical protein RHSIM_Rhsim07G0041900 [Rhododendron simsii][more]
CAA7029940.16.1e-3967.23unnamed protein product [Microthlaspi erraticum][more]
Match NameE-valueIdentityDescription
P0CV722.8e-1842.59Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P... [more]
P109784.1e-1439.81Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
Q9ZT949.2e-1441.58Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P041461.2e-1335.90Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q94HW24.3e-1137.62Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Match NameE-valueIdentityDescription
A0A5D3CGU03.1e-4486.27Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5D3DD635.8e-4385.29Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5D3CKU42.1e-4083.33Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00300 PE=4 SV=1[more]
A0A2N9HZ236.0e-4080.39Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic... [more]
A0A2N9J4G71.3e-3980.39Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic... [more]
Match NameE-valueIdentityDescription
AT4G23160.13.6e-1337.25cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00240.12.9e-1041.77Gag-Pol-related retrotransposon family protein [more]
ATMG00810.16.4e-1032.29DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF308SUBFAMILY NOT NAMEDcoord: 6..84
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 6..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0291001.1Cmc11g0291001.1mRNA