Cmc11g0288411 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAATTCGTCTGCCTACGCTTCTCCTCAATGCCAAGCAAATATTCAGAACGCAAGCTGTCTCAACAAGATGTCACTCCAACATTCCCAAAGGCCACATTGCAGTTTACGTGGGCGAGAATCGACGGAAGCGATTTGTGGTGCCGGTATCATACTTGAACCATCCTTCATTTCTAAGTTTGCTCAACAGAGCTGAAGAAGAGTTTGGATTCAACCATCCAAGTGGGGGTTTGACAATTCCCTGCAAAGAAGATGCCTTCATTGATCTCACTTCAAGATTGCATACCTCGTGA ATGGGAATTCGTCTGCCTACGCTTCTCCTCAATGCCAAGCAAATATTCAGAACGCAAGCTGTCTCAACAAGATGTCACTCCAACATTCCCAAAGGCCACATTGCAGTTTACGTGGGCGAGAATCGACGGAAGCGATTTGTGGTGCCGGTATCATACTTGAACCATCCTTCATTTCTAAGTTTGCTCAACAGAGCTGAAGAAGAGTTTGGATTCAACCATCCAAGTGGGGGTTTGACAATTCCCTGCAAAGAAGATGCCTTCATTGATCTCACTTCAAGATTGCATACCTCGTGA ATGGGAATTCGTCTGCCTACGCTTCTCCTCAATGCCAAGCAAATATTCAGAACGCAAGCTGTCTCAACAAGATGTCACTCCAACATTCCCAAAGGCCACATTGCAGTTTACGTGGGCGAGAATCGACGGAAGCGATTTGTGGTGCCGGTATCATACTTGAACCATCCTTCATTTCTAAGTTTGCTCAACAGAGCTGAAGAAGAGTTTGGATTCAACCATCCAAGTGGGGGTTTGACAATTCCCTGCAAAGAAGATGCCTTCATTGATCTCACTTCAAGATTGCATACCTCGTGA MGIRLPTLLLNAKQIFRTQAVSTRCHSNIPKGHIAVYVGENRRKRFVVPVSYLNHPSFLSLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSRLHTS Homology
BLAST of Cmc11g0288411 vs. NCBI nr
Match: XP_008457629.1 (PREDICTED: auxin-responsive protein SAUR23-like [Cucumis melo] >KAA0045669.1 auxin-responsive protein SAUR23-like [Cucumis melo var. makuwa] >TYJ99614.1 auxin-responsive protein SAUR23-like [Cucumis melo var. makuwa]) HSP 1 Score: 201.8 bits (512), Expect = 2.6e-48 Identity = 96/97 (98.97%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of Cmc11g0288411 vs. NCBI nr
Match: XP_011649270.1 (auxin-responsive protein SAUR24 [Cucumis sativus] >KGN61871.1 hypothetical protein Csa_006574 [Cucumis sativus]) HSP 1 Score: 189.9 bits (481), Expect = 1.0e-44 Identity = 89/97 (91.75%), Postives = 94/97 (96.91%), Query Frame = 0
BLAST of Cmc11g0288411 vs. NCBI nr
Match: XP_022146116.1 (auxin-responsive protein SAUR23-like [Momordica charantia]) HSP 1 Score: 171.8 bits (434), Expect = 2.9e-39 Identity = 78/97 (80.41%), Postives = 90/97 (92.78%), Query Frame = 0
BLAST of Cmc11g0288411 vs. NCBI nr
Match: XP_022146162.1 (auxin-responsive protein SAUR23-like [Momordica charantia]) HSP 1 Score: 167.5 bits (423), Expect = 5.5e-38 Identity = 76/94 (80.85%), Postives = 88/94 (93.62%), Query Frame = 0
BLAST of Cmc11g0288411 vs. NCBI nr
Match: XP_011649272.1 (auxin-responsive protein SAUR21 [Cucumis sativus]) HSP 1 Score: 167.2 bits (422), Expect = 7.2e-38 Identity = 74/97 (76.29%), Postives = 91/97 (93.81%), Query Frame = 0
BLAST of Cmc11g0288411 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 1.6e-24 Identity = 53/87 (60.92%), Postives = 69/87 (79.31%), Query Frame = 0
BLAST of Cmc11g0288411 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 2.8e-24 Identity = 54/86 (62.79%), Postives = 69/86 (80.23%), Query Frame = 0
BLAST of Cmc11g0288411 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 8.0e-24 Identity = 52/85 (61.18%), Postives = 68/85 (80.00%), Query Frame = 0
BLAST of Cmc11g0288411 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.4e-23 Identity = 52/86 (60.47%), Postives = 69/86 (80.23%), Query Frame = 0
BLAST of Cmc11g0288411 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 4.0e-23 Identity = 52/86 (60.47%), Postives = 68/86 (79.07%), Query Frame = 0
BLAST of Cmc11g0288411 vs. ExPASy TrEMBL
Match: A0A5D3BKR9 (Auxin-responsive protein SAUR23-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001880 PE=3 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 1.3e-48 Identity = 96/97 (98.97%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of Cmc11g0288411 vs. ExPASy TrEMBL
Match: A0A1S3C5W8 (auxin-responsive protein SAUR23-like OS=Cucumis melo OX=3656 GN=LOC103497277 PE=3 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 1.3e-48 Identity = 96/97 (98.97%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of Cmc11g0288411 vs. ExPASy TrEMBL
Match: A0A0A0LPH3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258670 PE=3 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 5.0e-45 Identity = 89/97 (91.75%), Postives = 94/97 (96.91%), Query Frame = 0
BLAST of Cmc11g0288411 vs. ExPASy TrEMBL
Match: A0A6J1CYD2 (auxin-responsive protein SAUR23-like OS=Momordica charantia OX=3673 GN=LOC111015411 PE=3 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.4e-39 Identity = 78/97 (80.41%), Postives = 90/97 (92.78%), Query Frame = 0
BLAST of Cmc11g0288411 vs. ExPASy TrEMBL
Match: A0A6J1CYU1 (auxin-responsive protein SAUR23-like OS=Momordica charantia OX=3673 GN=LOC111015445 PE=3 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 2.7e-38 Identity = 76/94 (80.85%), Postives = 88/94 (93.62%), Query Frame = 0
BLAST of Cmc11g0288411 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 119.0 bits (297), Expect = 2.1e-27 Identity = 57/99 (57.58%), Postives = 72/99 (72.73%), Query Frame = 0
BLAST of Cmc11g0288411 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 115.9 bits (289), Expect = 1.8e-26 Identity = 57/98 (58.16%), Postives = 75/98 (76.53%), Query Frame = 0
BLAST of Cmc11g0288411 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 113.2 bits (282), Expect = 1.1e-25 Identity = 53/87 (60.92%), Postives = 69/87 (79.31%), Query Frame = 0
BLAST of Cmc11g0288411 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.5 bits (280), Expect = 2.0e-25 Identity = 54/86 (62.79%), Postives = 69/86 (80.23%), Query Frame = 0
BLAST of Cmc11g0288411 vs. TAIR 10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.1 bits (279), Expect = 2.6e-25 Identity = 56/92 (60.87%), Postives = 69/92 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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