Cmc09g0252471 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0252471
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr09: 18532061 .. 18535336 (+)
RNA-Seq Expression	Cmc09g0252471
Synteny	Cmc09g0252471

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTAGAGATTGTATTCATAGATATACAAAGTTTAATTCCACGAGAAAATCTCGTGTGAACAAGTGTCATAGAAGAAAATAAAGGAATGAGAAATAGTGACAAAAAAAAAAGGGGAATGAGTATAATAATCCTAATTCTAATTCTCAGGTTATAATAATCCTCGATCAAATCTGGGTGGGCTACCTTTCATAATCCCATATCCTTCCATTCCAACCAAAAACACTATATTTCATAAAATTAGAGAGGGAGAGAAAAGTTAATTTACTTGTGGTATCGGGGATTTTTGGTTCATAAATATTTTGAGAGTTTTTTTTTTCTTGAACTTGACAATTTGAATGGACATTTAATTTAATTTCATTAAATTTAGTTATTTGAATTAAGGAATTAGAGTATTGAGAATCGAAAAGTTCTCCCAAACGCAGCCTTAGGTTGAGGGTTCATTCAGACAAGAAGTAAATAGAAGGCTTTTCCGGAGGAGGAATTTCAAGCTTCCCTTCCAACATCTTCACCACTTTCCCCATCGATGGTCTCTTCTCCGGTTGGTTTTGAACACACCACATCGCCGTTTGCACCATTCGGTTAACAATCGATACATGACCTCCGCTCTCGTATTCTTCCCTTATCCGACCGTCTAAAATCTCCTTCATCTTCTCCTCTACGAACGCCTTCTCGAATGCCCATCCTGGAAAGTACCAATCTGCACTCTCCACTGTCGATCTCTTTATCTCAAAATTCCTTGTCCCGCTGATTATCTCCAGCAGCACCATCCCGAAGCTGTACACATCTGCCTTCGTCGTTATTGAATTTGAACCCAATTTCACCAGCTCCGGTGCTACATAACCAGGCGTCCCTCTGATCCGAGACATACTCACTGTTGTATCCTCGTTTTTCCTCAATTTCGACAACCCGAAATCTGATAACTTCGGGCAGAAATCGTTGTCTAGAAGGATGTTCTCTGGTTTTATGTCTCGATGCAACACCCATTCCAAGCATTCCTCGTGCAAGTACGCGATTGCTCTCGCTACTCCAATGGCGATTCGGTACCGGATGCTCCAATCGAGCGGTGAGCTTTGTTCTTCCGTCTCTCTTTCGTCCTTCGCCGAATCGGAAGGTGAATGTTTGACAAAGAGGAATTTGTCCAGCGATCCATTGGGGATATGTTCGTATACTAAAATTCTCTGACCCTTTTCTGCGCAGAATCCCCACAATCGAAGCAAGTTAAGATGGTGCATTCTCGCGATGATGGTGACCTCCGCCCAAAAGTCACGGTCACCGCCGGCGACGTTTTTCAAGCACTTGACGGCTACCACGCGTTTGTCTGGCAGCTCCCCCTTGAAGACTTCGCCGAATCCGCCTCTTCCAATGCAGGTCGAGAAGTCGTTCGTGGCCGTCTTTAGCTCGGCATAATTGAACCGCTTTGGGCCGCCGGCAGGAAGTGATTCGAGACCAAGCGTGCGAGCCATGTCTCTGTATTTTACAAATCTCTTCAAGAATGCCCAGAAGAAAACGGCACCGGTAATTAGTTCGGCAACGAATATGGTACTGATTATCAATATGTTTCTGGTGGTGTTGTCTTTATTTACCGGCGGCGGCCGGATGGTGATGCGGACTGGACATGTAGTTTGGAGTTTGTACATCATTCCGGTGAAATTTGAGCGATCTGTTTCCGAATTGTCGACCTTCACAAAGGCAGCTGCCTTCATCCCAGGAGACCACAACCCGTTCGACAAAATGTCTAGCTGAAGCACACACTGGGCGCTGCCGTCGAAGCTGAATGTATAGCCCACGCAGCTCGAATTCTTCAAGCAATCCGCTTGACACACTGAAATATTTGGGGTTTGCAAAGAGATTTGTTTAACCCCGCCTCTAAAATTCACAAAATCCAGTTGAAGAAACTTGGCTTTGCTCGATACGTTGAGTTTCCGGTGGCATCCTTGCCGCGCCCCGCCACGAGGATCGGGGCTGAATCCGGGTGCGCAGACACAATAAGTGGAATTGTAACTGCCACTACTCATACAGACAGAATTTGGGCCACAAGTATCTAAAATATGACACAACTCTACATGTGCTTGCCAAACCACATCCCACCGAAGCCAATTGGGGTTGAAGCTAAAAATCTTGAGGTTCCCATCATCATCAACAACCAATTTCCGGAGCCGGGTCGAGTTAAAGTCTGAAGGGATAACTGGGATTTGATTGTTTATGATGATTTGACCATCAATTTGAAAATTCTGGAATGGATTTCCAGAGGTCCAGTAAGTCTCTGTACCAAACGTCAAATTAGCAGAGTTTACAAACGAATATTTGCGGTTGTTGGAGACGATTGTGGTTCCATTAAATGTATGATTAGGCAAGAAAGTATTGGTGGGGAATTGGAAGCTTTCCCATGTCCCGTAAATCAAATCACCATCGTCGCGAAGGATTAATTGGGTCGAATTTGAATTCGCAGAGACATTGTTGGAAGGCCAGAGGTTGCGACCGGAGGGGTCGTTGAGACGGAGCTGGCCGGTGGCTGTGATGACCAGAGCTGCTGAACGGTTGACCGGATGAAGACGGTTGGCGGACCAGACAACGTTGTCTGTTGAGATGTTGAAGTACCAAACGGAGAAGATGAAGAGATTGGAGTTGTTGGGTAGTGGGTGGAAGCCGGCGGCGAAAAGGGAGTTGGGGGAAAGGAGAATGAGGTTCTGGGTGGGCCGCCATGGAGATTGGGAAATTGAGAAGGAGGAGAAGTTGTGGGGGTTTGTTGTGGGTTGGGCGGCGGCCAGAGATAAGAGGAGGAGAAGGATGAGGATGAGGATGGAGAGAGGGGCAGCGTGGAAAAACATACTTCCGTTGAGGTTTGGCTGCCGGGAACAATGGGAAGATTTGAAATATATGAAGAGAAGAATGAATGGGTGAATGGGGATGGAAGATCTTCCATTATTTCCTCCAATCAAACCATTTTGAAAGCAAATGAGACCAAGACTGAAATTCAAAGTCGTCCACTTCCATTGGTGTTCTTTTCTTTTTTCTTTATTATACCCTCCTGCGTCAAAAATATTTATAAATTTAAAAAAGTTTCAAAAATACTTTAAATTTTGGTTGAGAAACACAAATTAGTCTGGTTAGGAATTTTGAACACCCCTTCTTTTTCCTGATCTATAAAATAAATTTAAAACTATGATTTTAACTTTAATTTGGTTGGTATAAAAATTGATATAAAATTTAGATTAATAAAAGTATTTTAAAAATATATGTAAAATTTGGATGAATAAAAATATTTTAAAACTTTT

mRNA sequence

TATTAGAGATTGTATTCATAGATATACAAAGTTTAATTCCACGAGAAAATCTCGTGTGAACAAGTGTCATAGAAGAAAATAAAGGAATGAGAAATAGTGACAAAAAAAAAAGGGGAATGAGTATAATAATCCTAATTCTAATTCTCAGGTTATAATAATCCTCGATCAAATCTGGGTGGGCTACCTTTCATAATCCCATATCCTTCCATTCCAACCAAAAACACTATATTTCATAAAATTAGAGAGGGAGAGAAAAGTTAATTTACTTGTGGTATCGGGGATTTTTGGTTCATAAATATTTTGAGAGTTTTTTTTTTCTTGAACTTGACAATTTGAATGGACATTTAATTTAATTTCATTAAATTTAGTTATTTGAATTAAGGAATTAGAGTATTGAGAATCGAAAAGTTCTCCCAAACGCAGCCTTAGGTTGAGGGTTCATTCAGACAAGAAGTAAATAGAAGGCTTTTCCGGAGGAGGAATTTCAAGCTTCCCTTCCAACATCTTCACCACTTTCCCCATCGATGGTCTCTTCTCCGGTTGGTTTTGAACACACCACATCGCCGTTTGCACCATTCGGTTAACAATCGATACATGACCTCCGCTCTCGTATTCTTCCCTTATCCGACCGTCTAAAATCTCCTTCATCTTCTCCTCTACGAACGCCTTCTCGAATGCCCATCCTGGAAAGTACCAATCTGCACTCTCCACTGTCGATCTCTTTATCTCAAAATTCCTTGTCCCGCTGATTATCTCCAGCAGCACCATCCCGAAGCTGTACACATCTGCCTTCGTCGTTATTGAATTTGAACCCAATTTCACCAGCTCCGGTGCTACATAACCAGGCGTCCCTCTGATCCGAGACATACTCACTGTTGTATCCTCGTTTTTCCTCAATTTCGACAACCCGAAATCTGATAACTTCGGGCAGAAATCGTTGTCTAGAAGGATGTTCTCTGGTTTTATGTCTCGATGCAACACCCATTCCAAGCATTCCTCGTGCAAGTACGCGATTGCTCTCGCTACTCCAATGGCGATTCGGTACCGGATGCTCCAATCGAGCGGTGAGCTTTGTTCTTCCGTCTCTCTTTCGTCCTTCGCCGAATCGGAAGAATCCCCACAATCGAAGCAAGTTAAGATGGTGCATTCTCGCGATGATGGTGACCTCCGCCCAAAAGTCACGGTCACCGCCGGCGACGTTTTTCAAGCACTTGACGGCTACCACGCGTTTGTCTGGCAGCTCCCCCTTGAAGACTTCGCCGAATCCGCCTCTTCCAATGCAGGTCGAGAAGTCGTTCGTGGCCGTCTTTAGCTCGGCATAATTGAACCGCTTTGGGCCGCCGGCAGGAAGTGATTCGAGACCAAGCGTGCGAGCCATGTCTCTGTATTTTACAAATCTCTTCAAGAATGCCCAGAAGAAAACGGCACCGGTAATTAGTTCGGCAACGAATATGGTACTGATTATCAATATGTTTCTGGTGGTGTTGTCTTTATTTACCGGCGGCGGCCGGATGGTGATGCGGACTGGACATGTAGTTTGGAGTTTGTACATCATTCCGGTGAAATTTGAGCGATCTGTTTCCGAATTGTCGACCTTCACAAAGGCAGCTGCCTTCATCCCAGGAGACCACAACCCGTTCGACAAAATGTCTAGCTGAAGCACACACTGGGCGCTGCCGTCGAAGCTGAATGTATAGCCCACGCAGCTCGAATTCTTCAAGCAATCCGCTTGACACACTGAAATATTTGGGGTTTGCAAAGAGATTTGTTTAACCCCGCCTCTAAAATTCACAAAATCCAGTTGAAGAAACTTGGCTTTGCTCGATACGTTGAGTTTCCGGTGGCATCCTTGCCGCGCCCCGCCACGAGGATCGGGGCTGAATCCGGGTGCGCAGACACAATAAGTGGAATTGTAACTGCCACTACTCATACAGACAGAATTTGGGCCACAAGTATCTAAAATATGACACAACTCTACATGTGCTTGCCAAACCACATCCCACCGAAGCCAATTGGGGTTGAAGCTAAAAATCTTGAGGTTCCCATCATCATCAACAACCAATTTCCGGAGCCGGGTCGAGTTAAAGTCTGAAGGGATAACTGGGATTTGATTGTTTATGATGATTTGACCATCAATTTGAAAATTCTGGAATGGATTTCCAGAGGTCCAGTAAGTCTCTGTACCAAACGTCAAATTAGCAGAGTTTACAAACGAATATTTGCGGTTGTTGGAGACGATTGTGGTTCCATTAAATGTATGATTAGGCAAGAAAGTATTGGTGGGGAATTGGAAGCTTTCCCATGTCCCGTAAATCAAATCACCATCGTCGCGAAGGATTAATTGGGTCGAATTTGAATTCGCAGAGACATTGTTGGAAGGCCAGAGGTTGCGACCGGAGGGGTCGTTGAGACGGAGCTGGCCGGTGGCTGTGATGACCAGAGCTGCTGAACGGTTGACCGGATGAAGACGGTTGGCGGACCAGACAACGTTGTCTGTTGAGATGTTGAAGTACCAAACGGAGAAGATGAAGAGATTGGAGTTGTTGGGTAGTGGGTGGAAGCCGGCGGCGAAAAGGGAGTTGGGGGAAAGGAGAATGAGGTTCTGGGTGGGCCGCCATGGAGATTGGGAAATTGAGAAGGAGGAGAAGTTGTGGGGGTTTGTTGTGGGTTGGGCGGCGGCCAGAGATAAGAGGAGGAGAAGGATGAGGATGAGGATGGAGAGAGGGGCAGCGTGGAAAAACATACTTCCGTTGAGGTTTGGCTGCCGGGAACAATGGGAAGATTTGAAATATATGAAGAGAAGAATGAATGGGTGAATGGGGATGGAAGATCTTCCATTATTTCCTCCAATCAAACCATTTTGAAAGCAAATGAGACCAAGACTGAAATTCAAAGTCGTCCACTTCCATTGGTGTTCTTTTCTTTTTTCTTTATTATACCCTCCTGCGTCAAAAATATTTATAAATTTAAAAAAGTTTCAAAAATACTTTAAATTTTGGTTGAGAAACACAAATTAGTCTGGTTAGGAATTTTGAACACCCCTTCTTTTTCCTGATCTATAAAATAAATTTAAAACTATGATTTTAACTTTAATTTGGTTGGTATAAAAATTGATATAAAATTTAGATTAATAAAAGTATTTTAAAAATATATGTAAAATTTGGATGAATAAAAATATTTTAAAACTTTT

Coding sequence (CDS)

ATGTTCTCTGGTTTTATGTCTCGATGCAACACCCATTCCAAGCATTCCTCGTGCAAGTACGCGATTGCTCTCGCTACTCCAATGGCGATTCGGTACCGGATGCTCCAATCGAGCGGTGAGCTTTGTTCTTCCGTCTCTCTTTCGTCCTTCGCCGAATCGGAAGAATCCCCACAATCGAAGCAAGTTAAGATGGTGCATTCTCGCGATGATGGTGACCTCCGCCCAAAAGTCACGGTCACCGCCGGCGACGTTTTTCAAGCACTTGACGGCTACCACGCGTTTGTCTGGCAGCTCCCCCTTGAAGACTTCGCCGAATCCGCCTCTTCCAATGCAGGTCGAGAAGTCGTTCGTGGCCGTCTTTAG

Protein sequence

MFSGFMSRCNTHSKHSSCKYAIALATPMAIRYRMLQSSGELCSSVSLSSFAESEESPQSKQVKMVHSRDDGDLRPKVTVTAGDVFQALDGYHAFVWQLPLEDFAESASSNAGREVVRGRL

Homology

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BLAST of Cmc09g0252471 vs. ExPASy TrEMBL
Match: A0A7C9A1T6 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 6.7e-07
Identity = 38/67 (56.72%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 1  MFSGFMSRCNTHSKHSSCKYAIALATPMAIRYRMLQSSGELCSSVSLSSFAESEESPQSK 60
          MFSG MS+C+THS+HSSCKYAIALATP AIRY + QSS    S   +    ES  SP   
Sbjct: 31 MFSGLMSQCSTHSRHSSCKYAIALATPRAIRYLVFQSSRGFRSMQLV--VVESAPSPSPS 90

Query: 61 QVKMVHS 68
           V  V S
Sbjct: 91 LVLFVSS 95

The following BLAST results are available for this feature:

BLAST of Cmc09g0252471 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc09g0252471 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc09g0252471 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7C9A1T6	6.7e-07	56.72	Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1	[more]

BLAST of Cmc09g0252471 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0252471.1	Cmc09g0252471.1	mRNA