Cmc09g0247951 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0247951
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr09: 13151399 .. 13151944 (-)
RNA-Seq Expression	Cmc09g0247951
Synteny	Cmc09g0247951

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTACTTCGAAGAGGGATTTTTTTTTTTTTTGCATCCTATACTTCTGGTGATTTTGGTAGTGTAAGGATGGACAATGACGCATCAATAAATGCAGTAGACATCAAAGATGTACATTTGAAGAACAAAAATGGTTCTAGCTTGATTTTAAAAAATGTGAAATATATTCCCGATATTCGTATGAACTTGATTTCTACAGGTAAGCTTGATGATGAAGGTTTCTGTAATACCTTCAATAATGACATATGGAAGCTTACTAAAAGTTCTATGGTTATAGCGAAGGGACAAAAATTTTCTTCATTGTACTATATGGATGCTAAAATCATGGATTATGATATAAATACAATAAATGATGAAGCGAATGTTGAGTTTTGGCATAAGAGATTTAACCATATGAGTGAGAAGTGTTTAAATATTTTAACCAAGGAAAATCATCTTCTTGATTTAATGAGTGTACCTCCAAAATGGTATCCTCATTGTTTGACAGGAAAGCAGATGAGGGTTACCTTTAAATCATCTCAACATTCGAGAAAGCCACTGTACTAG

mRNA sequence

ATGTTACTTCGAAGAGGGATTTTTTTTTTTTTTGCATCCTATACTTCTGGTGATTTTGGTAGTGTAAGGATGGACAATGACGCATCAATAAATGCAGTAGACATCAAAGATGTACATTTGAAGAACAAAAATGGTTCTAGCTTGATTTTAAAAAATGTGAAATATATTCCCGATATTCGTATGAACTTGATTTCTACAGGTAAGCTTGATGATGAAGGTTTCTGTAATACCTTCAATAATGACATATGGAAGCTTACTAAAAGTTCTATGGTTATAGCGAAGGGACAAAAATTTTCTTCATTGTACTATATGGATGCTAAAATCATGGATTATGATATAAATACAATAAATGATGAAGCGAATGTTGAGTTTTGGCATAAGAGATTTAACCATATGAGTGAGAAGTGTTTAAATATTTTAACCAAGGAAAATCATCTTCTTGATTTAATGAGTGTACCTCCAAAATGGTATCCTCATTGTTTGACAGGAAAGCAGATGAGGGTTACCTTTAAATCATCTCAACATTCGAGAAAGCCACTGTACTAG

Coding sequence (CDS)

ATGTTACTTCGAAGAGGGATTTTTTTTTTTTTTGCATCCTATACTTCTGGTGATTTTGGTAGTGTAAGGATGGACAATGACGCATCAATAAATGCAGTAGACATCAAAGATGTACATTTGAAGAACAAAAATGGTTCTAGCTTGATTTTAAAAAATGTGAAATATATTCCCGATATTCGTATGAACTTGATTTCTACAGGTAAGCTTGATGATGAAGGTTTCTGTAATACCTTCAATAATGACATATGGAAGCTTACTAAAAGTTCTATGGTTATAGCGAAGGGACAAAAATTTTCTTCATTGTACTATATGGATGCTAAAATCATGGATTATGATATAAATACAATAAATGATGAAGCGAATGTTGAGTTTTGGCATAAGAGATTTAACCATATGAGTGAGAAGTGTTTAAATATTTTAACCAAGGAAAATCATCTTCTTGATTTAATGAGTGTACCTCCAAAATGGTATCCTCATTGTTTGACAGGAAAGCAGATGAGGGTTACCTTTAAATCATCTCAACATTCGAGAAAGCCACTGTACTAG

Protein sequence

MLLRRGIFFFFASYTSGDFGSVRMDNDASINAVDIKDVHLKNKNGSSLILKNVKYIPDIRMNLISTGKLDDEGFCNTFNNDIWKLTKSSMVIAKGQKFSSLYYMDAKIMDYDINTINDEANVEFWHKRFNHMSEKCLNILTKENHLLDLMSVPPKWYPHCLTGKQMRVTFKSSQHSRKPLY

Homology

[Close]

BLAST of Cmc09g0247951 vs. NCBI nr
Match: KAA0040427.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 280.0 bits (715), Expect = 1.4e-71
Identity = 137/169 (81.07%), Postives = 144/169 (85.21%), Query Frame = 0


Query: 10  FFASYTSGDFGSVRMDNDASINAVDIKDVHLKNKNGSSLILKNVKYIPDIRMNLISTGKL 69
           FFASYT GDFGSVRM ND   N V I DVHLKN+NGS LILKNVK+IPDI MNLISTGKL
Sbjct: 229 FFASYTPGDFGSVRMGNDGPTNVVGIGDVHLKNRNGSRLILKNVKHIPDIHMNLISTGKL 288

Query: 70  DDEGFCNTFNNDIWKLTKSSMVIAKGQKFSSLYYMDAKIMDYDINTINDEANVEFWHKRF 129
           DDEGFCNTF+N IWKLTK SMVIA GQKFSSLYYMDAKI+DYDINT+NDEANVE WHKR 
Sbjct: 289 DDEGFCNTFDNGIWKLTKGSMVIASGQKFSSLYYMDAKIIDYDINTVNDEANVELWHKRL 348

Query: 130 NHMSEKCLNILTKENHLLDLMSVPPKWYPHCLTGKQMRVTFKSSQHSRK 179
           +HMSEK L ILTK+NHL DL S P K  PHCL GKQ RVTFKSSQHSRK
Sbjct: 349 SHMSEKGLKILTKKNHLHDLKSTPLKRCPHCLAGKQTRVTFKSSQHSRK 397

[Close]

BLAST of Cmc09g0247951 vs. NCBI nr
Match: TYJ98688.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 280.0 bits (715), Expect = 1.4e-71
Identity = 137/169 (81.07%), Postives = 144/169 (85.21%), Query Frame = 0


Query: 10  FFASYTSGDFGSVRMDNDASINAVDIKDVHLKNKNGSSLILKNVKYIPDIRMNLISTGKL 69
           FFASYT GDFGSVRM ND   N V I DVHLKN+NGS LILKNVK+IPDI MNLISTGKL
Sbjct: 229 FFASYTPGDFGSVRMGNDGPTNVVGIGDVHLKNRNGSRLILKNVKHIPDIHMNLISTGKL 288

Query: 70  DDEGFCNTFNNDIWKLTKSSMVIAKGQKFSSLYYMDAKIMDYDINTINDEANVEFWHKRF 129
           DDEGFCNTF+N IWKLTK SMVIA GQKFSSLYYMDAKI+DYDINT+NDEANVE WHKR 
Sbjct: 289 DDEGFCNTFDNGIWKLTKGSMVIASGQKFSSLYYMDAKIIDYDINTVNDEANVELWHKRL 348

Query: 130 NHMSEKCLNILTKENHLLDLMSVPPKWYPHCLTGKQMRVTFKSSQHSRK 179
           +HMSEK L ILTK+NHL DL S P K  PHCL GKQ RVTFKSSQHSRK
Sbjct: 349 SHMSEKGLKILTKKNHLHDLKSTPLKRCPHCLAGKQTRVTFKSSQHSRK 397

[Close]

BLAST of Cmc09g0247951 vs. NCBI nr
Match: KAA0047570.1 (putative retrotransposon [Cucumis melo var. makuwa] >TYK14964.1 putative retrotransposon [Cucumis melo var. makuwa])

HSP 1 Score: 258.1 bits (658), Expect = 5.8e-65
Identity = 132/181 (72.93%), Postives = 142/181 (78.45%), Query Frame = 0


Query: 10  FFASYTSGDFGSVRMDNDASINAVDIKDVHLKNKNGSSLILKNVKYIPDIRMNLISTGKL 69
           FFASYT  DFGSVRM ND S N V I DVHL N+NGS LILKNVK+I DIRMNLISTGKL
Sbjct: 177 FFASYTPSDFGSVRMGNDGSANVVGIGDVHL-NRNGSRLILKNVKHISDIRMNLISTGKL 236

Query: 70  DDEGFCNTFNNDIWKLTKSSMVIAKGQKFSSLYYMDAKIMDYDINTINDEANVEFWHKRF 129
           DDEGFCNTF+N IWKLTK S+VIA+G KFSSLYYMDAKI+D DINT+NDE N+E WHKR 
Sbjct: 237 DDEGFCNTFDNGIWKLTKGSIVIARGHKFSSLYYMDAKIIDSDINTVNDEVNIELWHKRL 296

Query: 130 NHMSEKCLNILTKE-----------NHLLDLMSVPPKWYPHCLTGKQMRVTFKSSQHSRK 180
           +HMSEK L ILTK+           NHL DL S P K  PHCL GKQ RVTFKSSQHSRK
Sbjct: 297 SHMSEKGLKILTKKNHLPDLKSTPLNHLPDLKSTPLKRCPHCLAGKQTRVTFKSSQHSRK 356

[Close]

BLAST of Cmc09g0247951 vs. NCBI nr
Match: KAA0065636.1 (putative retrotransposon [Cucumis melo var. makuwa] >TYK07205.1 putative retrotransposon [Cucumis melo var. makuwa])

HSP 1 Score: 249.6 bits (636), Expect = 2.1e-62
Identity = 124/168 (73.81%), Postives = 135/168 (80.36%), Query Frame = 0


Query: 12  ASYTSGDFGSVRMDNDASINAVDIKDVHLKNKNGSSLILKNVKYIPDIRMNLISTGKLDD 71
           ASYT GDFG+VRM ND S NAV I  VHLKN NGS LILKNVK+IPDIRMNLIST KLD+
Sbjct: 148 ASYTPGDFGNVRMGNDGSTNAVGIGGVHLKNINGSRLILKNVKHIPDIRMNLISTSKLDN 207

Query: 72  EGFCNTFNNDIWKLTKSSMVIAKGQKFSSLYYMDAKIMDYDINTINDEANVEFWHKRFNH 131
           EGFCNTF+N IWKLT+  MVIAKGQK S LYY+DAKI+D DINT+N EANVE W  R +H
Sbjct: 208 EGFCNTFDNGIWKLTEGFMVIAKGQKISLLYYVDAKIIDSDINTVNGEANVELWQMRLSH 267

Query: 132 MSEKCLNILTKENHLLDLMSVPPKWYPHCLTGKQMRVTFKSSQHSRKP 180
           MSEK L IL K+NHL DL S P KW+ H L GKQ  VTFKSSQHSRKP
Sbjct: 268 MSEKGLKILIKKNHLPDLKSAPLKWFAHYLAGKQTSVTFKSSQHSRKP 315

[Close]

BLAST of Cmc09g0247951 vs. NCBI nr
Match: RVW85908.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 214.9 bits (546), Expect = 5.6e-52
Identity = 104/170 (61.18%), Postives = 124/170 (72.94%), Query Frame = 0


Query: 10  FFASYTSGDFGSVRMDNDASINAVDIKDVHLKNKNGSSLILKNVKYIPDIRMNLISTGKL 69
           FF SYTSGDFGSVRM ND S  A+ ++DV L+  NG+ L LKNVK+IPDIRMNLISTGKL
Sbjct: 287 FFTSYTSGDFGSVRMGNDGSAKAISMRDVRLETSNGTMLTLKNVKHIPDIRMNLISTGKL 346

Query: 70  DDEGFCNTFNNDIWKLTKSSMVIAKGQKFSSLYYMDAKIMDYDINTINDEANVEFWHKRF 129
           DDEGFCNTF +  WKLT+ SMVIAKG K SSLY M A+++D  IN ++D++  E WH R 
Sbjct: 347 DDEGFCNTFRDSQWKLTRGSMVIAKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNRL 406

Query: 130 NHMSEKCLNILTKENHLLDLMSVPPKWYPHCLTGKQMRVTFKSSQHSRKP 180
            HMSEK L IL K+N L  +     K   HCL GKQ RV FK+ +H+RKP
Sbjct: 407 GHMSEKGLMILAKKNLLSSMKKGSLKRCAHCLAGKQTRVAFKTLRHTRKP 456

[Close]

BLAST of Cmc09g0247951 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.3e-32
Identity = 71/167 (42.51%), Postives = 104/167 (62.28%), Query Frame = 0


Query: 11  FASYTSGDFGSVRMDNDASINAVDIKDVHLKNKNGSSLILKNVKYIPDIRMNLISTGKLD 70
           F  Y +GDFG+V+M N +      I D+ +K   G +L+LK+V+++PD+RMNLIS   LD
Sbjct: 311 FCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALD 370

Query: 71  DEGFCNTFNNDIWKLTKSSMVIAKGQKFSSLYYMDAKIMDYDINTINDEANVEFWHKRFN 130
            +G+ + F N  W+LTK S+VIAKG    +LY  +A+I   ++N   DE +V+ WHKR  
Sbjct: 371 RDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGELNAAQDEISVDLWHKRMG 430

Query: 131 HMSEKCLNILTKENHLLDLMSVPPKWYPHCLTGKQMRVTFKSSQHSR 178
           HMSEK L IL K++ +        K   +CL GKQ RV+F++S   +
Sbjct: 431 HMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERK 477

[Close]

BLAST of Cmc09g0247951 vs. ExPASy TrEMBL
Match: A0A5D3BKF7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold429G00180 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.9e-72
Identity = 137/169 (81.07%), Postives = 144/169 (85.21%), Query Frame = 0


Query: 10  FFASYTSGDFGSVRMDNDASINAVDIKDVHLKNKNGSSLILKNVKYIPDIRMNLISTGKL 69
           FFASYT GDFGSVRM ND   N V I DVHLKN+NGS LILKNVK+IPDI MNLISTGKL
Sbjct: 229 FFASYTPGDFGSVRMGNDGPTNVVGIGDVHLKNRNGSRLILKNVKHIPDIHMNLISTGKL 288

Query: 70  DDEGFCNTFNNDIWKLTKSSMVIAKGQKFSSLYYMDAKIMDYDINTINDEANVEFWHKRF 129
           DDEGFCNTF+N IWKLTK SMVIA GQKFSSLYYMDAKI+DYDINT+NDEANVE WHKR 
Sbjct: 289 DDEGFCNTFDNGIWKLTKGSMVIASGQKFSSLYYMDAKIIDYDINTVNDEANVELWHKRL 348

Query: 130 NHMSEKCLNILTKENHLLDLMSVPPKWYPHCLTGKQMRVTFKSSQHSRK 179
           +HMSEK L ILTK+NHL DL S P K  PHCL GKQ RVTFKSSQHSRK
Sbjct: 349 SHMSEKGLKILTKKNHLHDLKSTPLKRCPHCLAGKQTRVTFKSSQHSRK 397

[Close]

BLAST of Cmc09g0247951 vs. ExPASy TrEMBL
Match: A0A5A7TFU1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold35G00580 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.9e-72
Identity = 137/169 (81.07%), Postives = 144/169 (85.21%), Query Frame = 0


Query: 10  FFASYTSGDFGSVRMDNDASINAVDIKDVHLKNKNGSSLILKNVKYIPDIRMNLISTGKL 69
           FFASYT GDFGSVRM ND   N V I DVHLKN+NGS LILKNVK+IPDI MNLISTGKL
Sbjct: 229 FFASYTPGDFGSVRMGNDGPTNVVGIGDVHLKNRNGSRLILKNVKHIPDIHMNLISTGKL 288

Query: 70  DDEGFCNTFNNDIWKLTKSSMVIAKGQKFSSLYYMDAKIMDYDINTINDEANVEFWHKRF 129
           DDEGFCNTF+N IWKLTK SMVIA GQKFSSLYYMDAKI+DYDINT+NDEANVE WHKR 
Sbjct: 289 DDEGFCNTFDNGIWKLTKGSMVIASGQKFSSLYYMDAKIIDYDINTVNDEANVELWHKRL 348

Query: 130 NHMSEKCLNILTKENHLLDLMSVPPKWYPHCLTGKQMRVTFKSSQHSRK 179
           +HMSEK L ILTK+NHL DL S P K  PHCL GKQ RVTFKSSQHSRK
Sbjct: 349 SHMSEKGLKILTKKNHLHDLKSTPLKRCPHCLAGKQTRVTFKSSQHSRK 397

[Close]

BLAST of Cmc09g0247951 vs. ExPASy TrEMBL
Match: A0A5D3CVK2 (Putative retrotransposon OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2754G00140 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.8e-65
Identity = 132/181 (72.93%), Postives = 142/181 (78.45%), Query Frame = 0


Query: 10  FFASYTSGDFGSVRMDNDASINAVDIKDVHLKNKNGSSLILKNVKYIPDIRMNLISTGKL 69
           FFASYT  DFGSVRM ND S N V I DVHL N+NGS LILKNVK+I DIRMNLISTGKL
Sbjct: 177 FFASYTPSDFGSVRMGNDGSANVVGIGDVHL-NRNGSRLILKNVKHISDIRMNLISTGKL 236

Query: 70  DDEGFCNTFNNDIWKLTKSSMVIAKGQKFSSLYYMDAKIMDYDINTINDEANVEFWHKRF 129
           DDEGFCNTF+N IWKLTK S+VIA+G KFSSLYYMDAKI+D DINT+NDE N+E WHKR 
Sbjct: 237 DDEGFCNTFDNGIWKLTKGSIVIARGHKFSSLYYMDAKIIDSDINTVNDEVNIELWHKRL 296

Query: 130 NHMSEKCLNILTKE-----------NHLLDLMSVPPKWYPHCLTGKQMRVTFKSSQHSRK 180
           +HMSEK L ILTK+           NHL DL S P K  PHCL GKQ RVTFKSSQHSRK
Sbjct: 297 SHMSEKGLKILTKKNHLPDLKSTPLNHLPDLKSTPLKRCPHCLAGKQTRVTFKSSQHSRK 356

[Close]

BLAST of Cmc09g0247951 vs. ExPASy TrEMBL
Match: A0A5D3C706 (Putative retrotransposon OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G00910 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.0e-62
Identity = 124/168 (73.81%), Postives = 135/168 (80.36%), Query Frame = 0


Query: 12  ASYTSGDFGSVRMDNDASINAVDIKDVHLKNKNGSSLILKNVKYIPDIRMNLISTGKLDD 71
           ASYT GDFG+VRM ND S NAV I  VHLKN NGS LILKNVK+IPDIRMNLIST KLD+
Sbjct: 148 ASYTPGDFGNVRMGNDGSTNAVGIGGVHLKNINGSRLILKNVKHIPDIRMNLISTSKLDN 207

Query: 72  EGFCNTFNNDIWKLTKSSMVIAKGQKFSSLYYMDAKIMDYDINTINDEANVEFWHKRFNH 131
           EGFCNTF+N IWKLT+  MVIAKGQK S LYY+DAKI+D DINT+N EANVE W  R +H
Sbjct: 208 EGFCNTFDNGIWKLTEGFMVIAKGQKISLLYYVDAKIIDSDINTVNGEANVELWQMRLSH 267

Query: 132 MSEKCLNILTKENHLLDLMSVPPKWYPHCLTGKQMRVTFKSSQHSRKP 180
           MSEK L IL K+NHL DL S P KW+ H L GKQ  VTFKSSQHSRKP
Sbjct: 268 MSEKGLKILIKKNHLPDLKSAPLKWFAHYLAGKQTSVTFKSSQHSRKP 315

[Close]

BLAST of Cmc09g0247951 vs. ExPASy TrEMBL
Match: A0A438HN89 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3233 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.7e-52
Identity = 104/170 (61.18%), Postives = 124/170 (72.94%), Query Frame = 0


Query: 10  FFASYTSGDFGSVRMDNDASINAVDIKDVHLKNKNGSSLILKNVKYIPDIRMNLISTGKL 69
           FF SYTSGDFGSVRM ND S  A+ ++DV L+  NG+ L LKNVK+IPDIRMNLISTGKL
Sbjct: 287 FFTSYTSGDFGSVRMGNDGSAKAISMRDVRLETSNGTMLTLKNVKHIPDIRMNLISTGKL 346

Query: 70  DDEGFCNTFNNDIWKLTKSSMVIAKGQKFSSLYYMDAKIMDYDINTINDEANVEFWHKRF 129
           DDEGFCNTF +  WKLT+ SMVIAKG K SSLY M A+++D  IN ++D++  E WH R 
Sbjct: 347 DDEGFCNTFRDSQWKLTRGSMVIAKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNRL 406

Query: 130 NHMSEKCLNILTKENHLLDLMSVPPKWYPHCLTGKQMRVTFKSSQHSRKP 180
            HMSEK L IL K+N L  +     K   HCL GKQ RV FK+ +H+RKP
Sbjct: 407 GHMSEKGLMILAKKNLLSSMKKGSLKRCAHCLAGKQTRVAFKTLRHTRKP 456

The following BLAST results are available for this feature:

BLAST of Cmc09g0247951 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0040427.1	1.4e-71	81.07	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYJ98688.1	1.4e-71	81.07	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0047570.1	5.8e-65	72.93	putative retrotransposon [Cucumis melo var. makuwa] >TYK14964.1 putative retrotr...	[more]
KAA0065636.1	2.1e-62	73.81	putative retrotransposon [Cucumis melo var. makuwa] >TYK07205.1 putative retrotr...	[more]
RVW85908.1	5.6e-52	61.18	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]

BLAST of Cmc09g0247951 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.3e-32	42.51	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Cmc09g0247951 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BKF7	6.9e-72	81.07	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7TFU1	6.9e-72	81.07	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3CVK2	2.8e-65	72.93	Putative retrotransposon OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5D3C706	1.0e-62	73.81	Putative retrotransposon OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A438HN89	2.7e-52	61.18	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]

BLAST of Cmc09g0247951 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 101..165 e-value: 5.9E-7 score: 29.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0247951.1	Cmc09g0247951.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0016020	membrane
molecular_function	GO:0003676	nucleic acid binding