Cmc09g0243711 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0243711
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	60S ribosomal protein L35
Location	CMiso1.1chr09: 6349426 .. 6351068 (+)
RNA-Seq Expression	Cmc09g0243711
Synteny	Cmc09g0243711

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTCTTCTCGGACGCGAAAACCCTAGTTTTCTCAGTAGCACCTCTTCCACCACCTTCCATCTCTTCTAGGGTTTCGCCGACTCCAAGACCGCACGATTAGAAATGGGTAAATTCTCAATCAAATCTTATCATAATCGAAATCTGACATTTGAAATTTTTGTTATTCAATTTGGTCTTTTTGGTTTGTAGCGAGGATCAAGGTTCATGAGTTGAGGCAGAAATCGAAGGCGGATCTGTTGTTGCAGCTTAAGGATCTTAAGGCGGAGCTTTCTCTCCTTCGTGTCGCCAAAGTTACCGGCGGTGCTCCGAACAAGCTATCCAAAATGTGATTCTCTTTTCCTTTGAGTACTTTTTAGCTCCGTAATGCATCTCATTGTTTAGTTTATCTTATTGTTCTATATTTTTTTTTTTTTAATTTTGCAGCAAGGTGGTGAGATTGTCGATTGCTCAAGTATTGACAGTAATATCTTAGAAGAAAAAGGCGGTGTTGAGGGAAGCTTACAATAAGAAGAAGCTTCTGCCGCTTGATCTGCGCCCAAAGAAGACCAGGGCCACTCGTAGAAGGCTCAGAAAGCACCAGGTAATTGTTTATTCATTATCCGTCGTTTAATTCCAGTACAAATTGATTTTGTATGTTCCTCTTTTAACTTTTTAATTGAATTTTATTACGGATTGTATGTGTAAATGTTGCCAATTTGAGATTTTCTACGTTCCCTAAAAAAAAGAAGGGCAGAACTGCTTGTTATGAATTGTGGATAGGTTTGTTAGTTCTGCACATTCATATATATTGTTGAAGTTAGGGATGTTTCACCAGTCATTTTTAAAAAATTTGCTTGTTTGTGTCCACTATCCTTGCAGTGATTTTCATCCTTGAATAACTCTATGGATTCTTAATCAATATCTGAAACAAAATCTACTTTTTTGGGTTCTTGAAAGCAATTTTGTAGGGAGTACATAACAATATACAGAGAGACACCCATGGGATTATTGCTTTTATAAGTTTAACTTTTGGTTATCAAATGGACCTTCATTTATTAGAATTGTGATTTCTTAAGTTCAAGTCTTCATGTAATATTGGATATAACCAACATGAGCGTAGTTCGGCGCGAATTTGTACAACTCTGAGTTCTAAGATTTGATACTTTTGAGTATGGTAGGTTTTGAGTTGATACTGACTGAATATGTATAAAAAACTTTACCCTCATTTCTTTTTTAATGATGCAATTATCATGCTTTGAACGTATTGGCGATATCCCATTTCTTTCTATTTTAGTTTTGAGTTTCGAGGTTCGACCATTTTGTTGAATGATTCCATTTTCTGATGCAGGCGTCTTTGAAAACTGAGAGACAGAAGAAGAAAGAATTGTACTTTCCGTTGAGGAAATATGCTATTAAGGTGTAGTGGTAAGTATTATATTGGGTAGTCCATTTTTATATGCAACGGCAAACCAATTTTGTTGGCAAGTTTTGTCTCGTAATCTTATGTCGGATACTCTTGAGGTATTTCTCCCCAAACCAAGGTGTTTCATTTTCATTGACAATTATATATTTTTGACAGTTGATAGCCTTTTTTCTTGTTTATTGACTTGATCTTTTTCTGTCCAAAAAACACTTGTTCTTTTTGTACATTTTGTTTGCTAGC

mRNA sequence

CCTTCTTCTCGGACGCGAAAACCCTAGTTTTCTCAGTAGCACCTCTTCCACCACCTTCCATCTCTTCTAGGGTTTCGCCGACTCCAAGACCGCACGATTAGAAATGGCGAGGATCAAGGTTCATGAGTTGAGGCAGAAATCGAAGGCGGATCTGTTGTTGCAGCTTAAGGATCTTAAGGCGGAGCTTTCTCTCCTTCGTGTCGCCAAAGTTACCGGCGGTGCTCCGAACAAGCTATCCAAAATCAAGGTGGTGAGATTGTCGATTGCTCAAGTATTGACAGTAATATCTTAGAAGAAAAAGGCGGTGTTGAGGGAAGCTTACAATAAGAAGAAGCTTCTGCCGCTTGATCTGCGCCCAAAGAAGACCAGGGCCACTCGTAGAAGGCTCAGAAAGCACCAGGCGTCTTTGAAAACTGAGAGACAGAAGAAGAAAGAATTGTACTTTCCGTTGAGGAAATATGCTATTAAGGTGTAGTGGTAAGTATTATATTGGGTAGTCCATTTTTATATGCAACGGCAAACCAATTTTGTTGGCAAGTTTTGTCTCGTAATCTTATGTCGGATACTCTTGAGGTATTTCTCCCCAAACCAAGGTGTTTCATTTTCATTGACAATTATATATTTTTGACAGTTGATAGCCTTTTTTCTTGTTTATTGACTTGATCTTTTTCTGTCCAAAAAACACTTGTTCTTTTTGTACATTTTGTTTGCTAGC

Coding sequence (CDS)

ATGGCGAGGATCAAGGTTCATGAGTTGAGGCAGAAATCGAAGGCGGATCTGTTGTTGCAGCTTAAGGATCTTAAGGCGGAGCTTTCTCTCCTTCGTGTCGCCAAAGTTACCGGCGGTGCTCCGAACAAGCTATCCAAAATCAAGGTGGTGAGATTGTCGATTGCTCAAGTATTGACAGTAATATCTTAG

Protein sequence

MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS

Homology

[Close]

BLAST of Cmc09g0243711 vs. NCBI nr
Match: XP_004149815.1 (60S ribosomal protein L35 [Cucumis sativus] >KGN51259.1 hypothetical protein Csa_008929 [Cucumis sativus])

HSP 1 Score: 109.4 bits (272), Expect = 1.1e-20
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
          MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc09g0243711 vs. NCBI nr
Match: XP_008463526.1 (PREDICTED: 60S ribosomal protein L35 [Cucumis melo])

HSP 1 Score: 109.4 bits (272), Expect = 1.1e-20
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
          MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc09g0243711 vs. NCBI nr
Match: XP_022992073.1 (60S ribosomal protein L35-like [Cucurbita maxima])

HSP 1 Score: 108.6 bits (270), Expect = 1.9e-20
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
          MARIKVHELRQKSKADLL+QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1  MARIKVHELRQKSKADLLIQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc09g0243711 vs. NCBI nr
Match: XP_038889679.1 (60S ribosomal protein L35 [Benincasa hispida])

HSP 1 Score: 108.2 bits (269), Expect = 2.5e-20
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
          MARIKVHELRQKSK+DLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1  MARIKVHELRQKSKSDLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc09g0243711 vs. NCBI nr
Match: XP_023525260.1 (60S ribosomal protein L35-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 107.5 bits (267), Expect = 4.3e-20
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
          MARIKVHELRQKSKADLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc09g0243711 vs. ExPASy Swiss-Prot
Match: Q9M5L0 (60S ribosomal protein L35 OS=Euphorbia esula OX=3993 GN=RPL35 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.4e-21
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
          MARIKVHELRQK+KA+LL QLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1  MARIKVHELRQKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc09g0243711 vs. ExPASy Swiss-Prot
Match: O80626 (60S ribosomal protein L35-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35B PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.3e-19
Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
          MARIKVHELR+KSKADL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1  MARIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc09g0243711 vs. ExPASy Swiss-Prot
Match: Q9SF53 (60S ribosomal protein L35-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35A PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.8e-19
Identity = 54/62 (87.10%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
          MARIKVHELR+KSK+DL  QLK+LKAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1  MARIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61 IS 63
           S
Sbjct: 61 SS 62

[Close]

BLAST of Cmc09g0243711 vs. ExPASy Swiss-Prot
Match: Q9LZ41 (60S ribosomal protein L35-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35D PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 5.0e-19
Identity = 54/62 (87.10%), Postives = 56/62 (90.32%), Query Frame = 0


Query: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
          MARIKVHELR KSK DL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1  MARIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc09g0243711 vs. ExPASy Swiss-Prot
Match: Q9M3D2 (60S ribosomal protein L35-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35C PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.9e-18
Identity = 53/62 (85.48%), Postives = 56/62 (90.32%), Query Frame = 0


Query: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
          MARIKVHELR KSK+DL  QLK+LKAEL+ LRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1  MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61 IS 63
           S
Sbjct: 61 SS 62

[Close]

BLAST of Cmc09g0243711 vs. ExPASy TrEMBL
Match: A0A0A0KQT2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G505200 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.5e-21
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
          MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc09g0243711 vs. ExPASy TrEMBL
Match: A0A1S3CJH2 (60S ribosomal protein L35 OS=Cucumis melo OX=3656 GN=LOC103501660 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.5e-21
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
          MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc09g0243711 vs. ExPASy TrEMBL
Match: A0A6J1JY13 (60S ribosomal protein L35-like OS=Cucurbita maxima OX=3661 GN=LOC111488528 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 9.4e-21
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
          MARIKVHELRQKSKADLL+QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1  MARIKVHELRQKSKADLLIQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc09g0243711 vs. ExPASy TrEMBL
Match: A0A6J1JVN4 (60S ribosomal protein L35 OS=Cucurbita maxima OX=3661 GN=LOC111488270 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.1e-20
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
          MARIKVHELRQKSKADLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc09g0243711 vs. ExPASy TrEMBL
Match: A0A6J1FH81 (60S ribosomal protein L35 OS=Cucurbita moschata OX=3662 GN=LOC111445667 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.1e-20
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
          MARIKVHELRQKSKADLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc09g0243711 vs. TAIR 10
Match: AT2G39390.1 (Ribosomal L29 family protein )

HSP 1 Score: 96.3 bits (238), Expect = 9.3e-21
Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
          MARIKVHELR+KSKADL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1  MARIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc09g0243711 vs. TAIR 10
Match: AT3G09500.1 (Ribosomal L29 family protein )

HSP 1 Score: 94.7 bits (234), Expect = 2.7e-20
Identity = 54/62 (87.10%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
          MARIKVHELR+KSK+DL  QLK+LKAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1  MARIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61 IS 63
           S
Sbjct: 61 SS 62

[Close]

BLAST of Cmc09g0243711 vs. TAIR 10
Match: AT5G02610.1 (Ribosomal L29 family protein )

HSP 1 Score: 94.4 bits (233), Expect = 3.5e-20
Identity = 54/62 (87.10%), Postives = 56/62 (90.32%), Query Frame = 0


Query: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
          MARIKVHELR KSK DL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1  MARIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc09g0243711 vs. TAIR 10
Match: AT3G55170.1 (Ribosomal L29 family protein )

HSP 1 Score: 92.4 bits (228), Expect = 1.3e-19
Identity = 53/62 (85.48%), Postives = 56/62 (90.32%), Query Frame = 0


Query: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
          MARIKVHELR KSK+DL  QLK+LKAEL+ LRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1  MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61 IS 63
           S
Sbjct: 61 SS 62

[Close]

BLAST of Cmc09g0243711 vs. TAIR 10
Match: AT3G55170.2 (Ribosomal L29 family protein )

HSP 1 Score: 92.4 bits (228), Expect = 1.3e-19
Identity = 53/62 (85.48%), Postives = 56/62 (90.32%), Query Frame = 0


Query: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
          MARIKVHELR KSK+DL  QLK+LKAEL+ LRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1  MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61 IS 63
           S
Sbjct: 61 SS 62

The following BLAST results are available for this feature:

BLAST of Cmc09g0243711 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149815.1	1.1e-20	100.00	60S ribosomal protein L35 [Cucumis sativus] >KGN51259.1 hypothetical protein Csa...	[more]
XP_008463526.1	1.1e-20	100.00	PREDICTED: 60S ribosomal protein L35 [Cucumis melo]	[more]
XP_022992073.1	1.9e-20	98.39	60S ribosomal protein L35-like [Cucurbita maxima]	[more]
XP_038889679.1	2.5e-20	98.39	60S ribosomal protein L35 [Benincasa hispida]	[more]
XP_023525260.1	4.3e-20	98.39	60S ribosomal protein L35-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc09g0243711 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M5L0	1.4e-21	93.55	60S ribosomal protein L35 OS=Euphorbia esula OX=3993 GN=RPL35 PE=2 SV=1	[more]
O80626	1.3e-19	88.71	60S ribosomal protein L35-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35B PE=2 SV=1	[more]
Q9SF53	3.8e-19	87.10	60S ribosomal protein L35-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35A PE=2 SV=1	[more]
Q9LZ41	5.0e-19	87.10	60S ribosomal protein L35-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35D PE=2 SV=1	[more]
Q9M3D2	1.9e-18	85.48	60S ribosomal protein L35-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35C PE=2 SV=1	[more]

BLAST of Cmc09g0243711 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQT2	5.5e-21	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G505200 PE=3 SV=1	[more]
A0A1S3CJH2	5.5e-21	100.00	60S ribosomal protein L35 OS=Cucumis melo OX=3656 GN=LOC103501660 PE=3 SV=1	[more]
A0A6J1JY13	9.4e-21	98.39	60S ribosomal protein L35-like OS=Cucurbita maxima OX=3661 GN=LOC111488528 PE=3 ...	[more]
A0A6J1JVN4	2.1e-20	98.39	60S ribosomal protein L35 OS=Cucurbita maxima OX=3661 GN=LOC111488270 PE=3 SV=1	[more]
A0A6J1FH81	2.1e-20	98.39	60S ribosomal protein L35 OS=Cucurbita moschata OX=3662 GN=LOC111445667 PE=3 SV=...	[more]

BLAST of Cmc09g0243711 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39390.1	9.3e-21	88.71	Ribosomal L29 family protein	[more]
AT3G09500.1	2.7e-20	87.10	Ribosomal L29 family protein	[more]
AT5G02610.1	3.5e-20	87.10	Ribosomal L29 family protein	[more]
AT3G55170.1	1.3e-19	85.48	Ribosomal L29 family protein	[more]
AT3G55170.2	1.3e-19	85.48	Ribosomal L29 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 14..34
None	No IPR available	PANTHER	PTHR45722:SF14	60S RIBOSOMAL L35-LIKE PROTEIN	coord: 1..62
None	No IPR available	CDD	cd00427	Ribosomal_L29_HIP	coord: 8..62 e-value: 4.18036E-7 score: 39.7783
IPR036049	Ribosomal protein L29/L35 superfamily	GENE3D	1.10.287.310		coord: 1..62 e-value: 2.5E-28 score: 100.2
IPR036049	Ribosomal protein L29/L35 superfamily	SUPERFAMILY	46561	Ribosomal protein L29 (L29p)	coord: 4..61
IPR001854	Ribosomal protein L29/L35	PFAM	PF00831	Ribosomal_L29	coord: 8..61 e-value: 7.7E-17 score: 61.0
IPR001854	Ribosomal protein L29/L35	TIGRFAM	TIGR00012	TIGR00012	coord: 8..62 e-value: 9.3E-17 score: 58.8
IPR001854	Ribosomal protein L29/L35	HAMAP	MF_00374	Ribosomal_L29	coord: 4..62 score: 10.581759
IPR045059	60S ribosomal protein L35	PANTHER	PTHR45722	60S RIBOSOMAL PROTEIN L35	coord: 1..62

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0243711.1	Cmc09g0243711.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome