Cmc08g0212321 (gene) Melon (Charmono) v1.1

Overview
NameCmc08g0212321
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr08: 3237592 .. 3238656 (+)
RNA-Seq ExpressionCmc08g0212321
SyntenyCmc08g0212321
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCATTCCTTTGTTATCTTTTTACTTATAACTTATCGAACTTTATGTTTTTGTTGTTAGAGTGATTGTACTTCATTTAAATCCACAAAGTATTTATTCCAACCATTATAGAGTGACAAGCACATCAACTTTTTGTTAGATAGTAATTTGGGTTTATCTATTAATGAGTCAAATTTGGACATAAGAGTCTGCTGCAGGTATATATTTTTATAAGAGATGGGGGTAAAATTGTAAGATCAACCTCCAAAAGGTTTCATCAAAATGTGAAGTCTCATCAAAGATGGATGAGAAAAACTAATTCTTCATTTATCTTTTTCATTTGTGGAATGCCCTATGCTAAGTGCTACTTTTAAAATAGTAATAAACAGGTCCAAATGTCCAATTGTTTTGTTTTTGTTTTTGTCTTTTTTTTTTTTCATTTTTTCTTTAAAAGAAAAAACAAATCAAAAAAGCCTAAACCACGAAGCCCCTATTTTCCCGTTATTTACACAACAAGCCCATCGCATTTTCCAAAAACTGACCCTCACTCGGGAATCGCCATCAAGTTCGCCGCGAACTTTTTTCTTCCACCGGCGCCACCACGGCCGGCCGCCACTCGTTTACGAGTCTTGAGTTCCTCAACCGTGAAAACAACAGGAGACACCGATCTCCGTCGGTGGCCACATTTATCTCCGCCGCTACATTTCATTAGCGCAGAGTTGGCCTTGACAGCCAATGCCGCCATTTCTTCAGCCTGAAGCGGCTGCCTCAGCCTATTCAATGGCAGCGCAAAATAAAGCTGTCCGATCTGAAGCTCCTCGTCGTCATTAATAGCTGACAAAGCATCGTCGAAATCCATTTCGTCGGAGTTGCATATGAAGCACGACGGATTCTTTTGAAGAACGTACGAAACTTTAACCGGATACGAAAATTCCTGCAGACTTCCGTCGTGAAGGATCAGTTTAGCGGTGGCAACGGCGGCAGATTCCGAAGAACTGCAAATACCCATTAACGGCGGCGAGGCACGGCAGAGGTACTTAGAGAGAACGGCGGGTGGTGGAATTGGAGGCGTTAGGGATTTGGGA

mRNA sequence

CTTTCATTCCTTTGTTATCTTTTTACTTATAACTTATCGAACTTTATGTTTTTGTTGTTAGAGTGATTGTACTTCATTTAAATCCACAAAGTATTTATTCCAACCATTATAGAGTGACAAGCACATCAACTTTTTGTTAGATAGTAATTTGGGTTTATCTATTAATGAGTCAAATTTGGACATAAGAGTCTGCTGCAGGTATATATTTTTATAAGAGATGGGGGTAAAATTGTAAGATCAACCTCCAAAAGGTTTCATCAAAATGTGAAGTCTCATCAAAGATGGATGAGAAAAACTAATTCTTCATTTATCTTTTTCATTTGTGGAATGCCCTATGCTAAGTGCTACTTTTAAAATAGTAATAAACAGGTCCAAATGTCCAATTGTTTTGTTTTTGTTTTTGTCTTTTTTTTTTTTCATTTTTTCTTTAAAAGAAAAAACAAATCAAAAAAGCCTAAACCACGAAGCCCCTATTTTCCCGTTATTTACACAACAAGCCCATCGCATTTTCCAAAAACTGACCCTCACTCGGGAATCGCCATCAAGTTCGCCGCGAACTTTTTTCTTCCACCGGCGCCACCACGGCCGGCCGCCACTCGTTTACGAGTCTTGAGTTCCTCAACCGTGAAAACAACAGGAGACACCGATCTCCGTCGGTGGCCACATTTATCTCCGCCGCTACATTTCATTAGCGCAGAGTTGGCCTTGACAGCCAATGCCGCCATTTCTTCAGCCTGAAGCGGCTGCCTCAGCCTATTCAATGGCAGCGCAAAATAAAGCTGTCCGATCTGAAGCTCCTCGTCGTCATTAATAGCTGACAAAGCATCGTCGAAATCCATTTCGTCGGAGTTGCATATGAAGCACGACGGATTCTTTTGAAGAACGTACGAAACTTTAACCGGATACGAAAATTCCTGCAGACTTCCGTCGTGAAGGATCAGTTTAGCGGTGGCAACGGCGGCAGATTCCGAAGAACTGCAAATACCCATTAACGGCGGCGAGGCACGGCAGAGGTACTTAGAGAGAACGGCGGGTGGTGGAATTGGAGGCGTTAGGGATTTGGGA

Coding sequence (CDS)

ATGTCCAATTGTTTTGTTTTTGTTTTTGTCTTTTTTTTTTTTCATTTTTTCTTTAAAAGAAAAAACAAATCAAAAAAGCCTAAACCACGAAGCCCCTATTTTCCCGTTATTTACACAACAAGCCCATCGCATTTTCCAAAAACTGACCCTCACTCGGGAATCGCCATCAAGTTCGCCGCGAACTTTTTTCTTCCACCGGCGCCACCACGGCCGGCCGCCACTCGTTTACGAGTCTTGAGTTCCTCAACCGTGAAAACAACAGGAGACACCGATCTCCGTCGGTGGCCACATTTATCTCCGCCGCTACATTTCATTAGCGCAGAGTTGGCCTTGACAGCCAATGCCGCCATTTCTTCAGCCTGA

Protein sequence

MSNCFVFVFVFFFFHFFFKRKNKSKKPKPRSPYFPVIYTTSPSHFPKTDPHSGIAIKFAANFFLPPAPPRPAATRLRVLSSSTVKTTGDTDLRRWPHLSPPLHFISAELALTANAAISSA
Homology
[Close]
BLAST of Cmc08g0212321 vs. NCBI nr
Match: POO02632.1 (hypothetical protein TorRG33x02_016180 [Trema orientale])

HSP 1 Score: 70.1 bits (170), Expect = 1.5e-08
Identity = 43/82 (52.44%), Postives = 50/82 (60.98%), Query Frame = 0 

Query: 50  PHSGIAIKFAANFFLPP------------APPRPAATRLRVLSSSTVKTTGDTDLRRWPH 109
           P+SGI +  A NF LPP            APP   +T    L++S  KT GDT+ RR PH
Sbjct: 52  PYSGIELNIAVNFLLPPLLLTLLDPPPAAAPPSLPSTLREDLTASPEKTIGDTESRRHPH 111

Query: 110 LSPPLHFISAELALTANAAISS 120
            SPPL F+ AELALTANAAISS
Sbjct: 112 FSPPL-FMRAELALTANAAISS 132

[Close]
BLAST of Cmc08g0212321 vs. ExPASy TrEMBL
Match: A0A2P5FXW1 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_016180 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 7.2e-09
Identity = 43/82 (52.44%), Postives = 50/82 (60.98%), Query Frame = 0 

Query: 50  PHSGIAIKFAANFFLPP------------APPRPAATRLRVLSSSTVKTTGDTDLRRWPH 109
           P+SGI +  A NF LPP            APP   +T    L++S  KT GDT+ RR PH
Sbjct: 52  PYSGIELNIAVNFLLPPLLLTLLDPPPAAAPPSLPSTLREDLTASPEKTIGDTESRRHPH 111

Query: 110 LSPPLHFISAELALTANAAISS 120
            SPPL F+ AELALTANAAISS
Sbjct: 112 FSPPL-FMRAELALTANAAISS 132

The following BLAST results are available for this feature:
BLAST of Cmc08g0212321 vs. NCBI nr
Match NameE-valueIdentityDescription
POO02632.11.5e-0852.44hypothetical protein TorRG33x02_016180 [Trema orientale][more]
BLAST of Cmc08g0212321 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc08g0212321 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2P5FXW17.2e-0952.44Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_016180 PE=4 SV... [more]
BLAST of Cmc08g0212321 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc08g0212321.1Cmc08g0212321.1mRNA