Cmc08g0208471 (gene) Melon (Charmono) v1.1

Overview
NameCmc08g0208471
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr08: 1250316 .. 1252150 (+)
RNA-Seq ExpressionCmc08g0208471
SyntenyCmc08g0208471
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTGATAAAGTGATTTTTAATTAAGGAAAAAAAAGAGCCTAAATTACTATTTAGTTAAGCAAGGGAAGCAGAATCGCAATCCTTGAACCTCAAGAACTCTGAAAATTGGTAGCATTAGAGTGATGAGAGACACGAATTAGAAGGTTGATATATTGACGAAGAACTCAAGATCAACATCTCCCCAATGGAGTTATCAAATCAAGAATTGACCGATGAACACAAGAAAGATGAACTGATTGAGAAACTACTCACGTCATTGAGAAAAGAAAGAATGGAAACATTCCAGGTTGAGAGAAGATTGACGTCGGAGTTGTTCACTCTATGGAATCGGAACGAGGAAAAGCAAAAGAAAATGAGAGACAGACGCCTAGTGATCAAGGATGAAGGGACTACGTCTTCAAGAAAAAAAGGAAAAGAAAAACTAATTTCGGATTACCCTTTGGCAATATTAAATGATCTCATAGCGAGGTTCGTGGATTATGTAGATAATATGAAAGATATGACGACAATTACAAATACTCAGAAAACGGAAAATGGTTGGCTCGACTATTTTAAAGCTGGAATCGAAGTGTTTCGGTTAATAAATACAAATCTGAAGAAGTTATTGATAAAGGACGTGTCATGGATGAAGGAGGAAGACTCGGAAAACTACACACAAGTGTATGAAAAAATGTCTAGATTGGAGAAGATTAATGAAATCTTGGATGACTGTCAAGTTACAGAAAGTGACCTTACGACATCTGACTTCGAGGTTTGCAAACATGGCTTCCAAGAATGTGCAAAGGATTTGAATAAGTTGCTTGATGATATGGTACGATGGGAAGGCAAATTACAACATGAAATCAAAGATTACAACGCGGAATTGTTCGTCCAGTCAGACGTCATTGAAAGCCATTGCGGACCCGGCCACCGTAATATCGAAGAAGAAAATCACGAAAATCTCCTTCAAGATGATAACCAGCCAAATGATCGGAAATTGATTAATAATCAGAAAGTCGAACAATATCTGCATCCATCGCATCCGCCTCTATCTTCGAAAAGGGCGAACCTGGAAGGAAGGAAAAGGAAGGATCGTGAAGCAGCTTTAGATTAAATAATATTTGATTCAAATTAAAGTTTGTAAGCAGTTTTAGATTTTTCTTTTTCAGTTTTGTAGAGCTATAAAAGAGGAATTAGAATAATCAAAATCTCCACGAATGTATGTGTATACATGTATAGTGACTTCTCCAAAGGCAACATCACTCCATCCACAAAATTTGAGATTATATTAATAGTTCAAAAGAATCAAACATGTTTAAACTTCATCACGATCACGAAGACGAGGATCGTATATTTCGGAATGCTTTGAATTTATTACGGCAAACAACCCAGTACAAAATGAGCAACAAAAACAAAGGAAAAAGGGATTGGATGAGTTCGATTTGATCTCCCTTCAAACTGTGGTGTGGAAATTCAATAATTTCATCGATGATATGATCGGCCCGATATTTAATTACCATAATAATACAAAACGGTGGCGAGATTCGAAAAAGTGGAGGATAAGTTGAAATTTCTTCGGAAGGTAAATGATTTGCTGCTAAATTCCTCTAAAATTGTGGGCAAGTTACTGGAACTCATCCACAAGAATAATGGTGGAAAATTCGGTGACCAAAATCAAAACACATTCCTGAAATTGAAATTTGTGTTCAATTGATGGAGTTTGGTGCAGAATTTGTAGAACGATCAGGCATTGGGTGTCTGTTTAAAGAACAAAGCACTGAGTTATCATTATCAAGGCTTAATGGATCGAGGGAAAACTTGATGGTTATCCATTGGAGAATCATGAGACTTATTC

mRNA sequence

CTTTGATAAAGTGATTTTTAATTAAGGAAAAAAAAGAGCCTAAATTACTATTTAGTTAAGCAAGGGAAGCAGAATCGCAATCCTTGAACCTCAAGAACTCTGAAAATTGGTAGCATTAGAGTGATGAGAGACACGAATTAGAAGGTTGATATATTGACGAAGAACTCAAGATCAACATCTCCCCAATGGAGTTATCAAATCAAGAATTGACCGATGAACACAAGAAAGATGAACTGATTGAGAAACTACTCACGTCATTGAGAAAAGAAAGAATGGAAACATTCCAGGTTGAGAGAAGATTGACGTCGGAGTTGTTCACTCTATGGAATCGGAACGAGGAAAAGCAAAAGAAAATGAGAGACAGACGCCTAGTGATCAAGGATGAAGGGACTACGTCTTCAAGAAAAAAAGGAAAAGAAAAACTAATTTCGGATTACCCTTTGGCAATATTAAATGATCTCATAGCGAGGTTCGTGGATTATGTAGATAATATGAAAGATATGACGACAATTACAAATACTCAGAAAACGGAAAATGGTTGGCTCGACTATTTTAAAGCTGGAATCGAAGTGTTTCGGTTAATAAATACAAATCTGAAGAAGTTATTGATAAAGGACGTGTCATGGATGAAGGAGGAAGACTCGGAAAACTACACACAAGTGTATGAAAAAATGTCTAGATTGGAGAAGATTAATGAAATCTTGGATGACTGTCAAGTTACAGAAAGTGACCTTACGACATCTGACTTCGAGGTTTGCAAACATGGCTTCCAAGAATGTGCAAAGGATTTGAATAAGTTGCTTGATGATATGGTACGATGGGAAGGCAAATTACAACATGAAATCAAAGATTACAACGCGGAATTGTTCGTCCAGTCAGACGTCATTGAAAGCCATTGCGGACCCGGCCACCGTAATATCGAAGAAGAAAATCACGAAAATCTCCTTCAAGATGATAACCAGCCAAATGATCGGAAATTGATTAATAATCAGAAAGTCGAACAATATCTGCATCCATCGCATCCGCCTCTATCTTCGAAAAGGGCGAACCTGGAAGGAAGGAAAAGGAAGGATCGTGAAGCAGCTTTAGATTAAATAATATTTGATTCAAATTAAAGTTTGTAAGCAGTTTTAGATTTTTCTTTTTCAGTTTTGTAGAGCTATAAAAGAGGAATTAGAATAATCAAAATCTCCACGAATGTATGTGTATACATGTATAGTGACTTCTCCAAAGGCAACATCACTCCATCCACAAAATTTGAGATTATATTAATAGTTCAAAAGAATCAAACATGTTTAAACTTCATCACGATCACGAAGACGAGGATCGTATATTTCGGAATGCTTTGAATTTATTACGGCAAACAACCCAGTACAAAATGAGCAACAAAAACAAAGGAAAAAGGGATTGGATGAGTTCGATTTGATCTCCCTTCAAACTGTGGTGTGGAAATTCAATAATTTCATCGATGATATGATCGGCCCGATATTTAATTACCATAATAATACAAAACGGTGGCGAGATTCGAAAAAGTGGAGGATAAGTTGAAATTTCTTCGGAAGGTAAATGATTTGCTGCTAAATTCCTCTAAAATTGTGGGCAAGTTACTGGAACTCATCCACAAGAATAATGGTGGAAAATTCGGTGACCAAAATCAAAACACATTCCTGAAATTGAAATTTGTGTTCAATTGATGGAGTTTGGTGCAGAATTTGTAGAACGATCAGGCATTGGGTGTCTGTTTAAAGAACAAAGCACTGAGTTATCATTATCAAGGCTTAATGGATCGAGGGAAAACTTGATGGTTATCCATTGGAGAATCATGAGACTTATTC

Coding sequence (CDS)

ATGGAGTTATCAAATCAAGAATTGACCGATGAACACAAGAAAGATGAACTGATTGAGAAACTACTCACGTCATTGAGAAAAGAAAGAATGGAAACATTCCAGGTTGAGAGAAGATTGACGTCGGAGTTGTTCACTCTATGGAATCGGAACGAGGAAAAGCAAAAGAAAATGAGAGACAGACGCCTAGTGATCAAGGATGAAGGGACTACGTCTTCAAGAAAAAAAGGAAAAGAAAAACTAATTTCGGATTACCCTTTGGCAATATTAAATGATCTCATAGCGAGGTTCGTGGATTATGTAGATAATATGAAAGATATGACGACAATTACAAATACTCAGAAAACGGAAAATGGTTGGCTCGACTATTTTAAAGCTGGAATCGAAGTGTTTCGGTTAATAAATACAAATCTGAAGAAGTTATTGATAAAGGACGTGTCATGGATGAAGGAGGAAGACTCGGAAAACTACACACAAGTGTATGAAAAAATGTCTAGATTGGAGAAGATTAATGAAATCTTGGATGACTGTCAAGTTACAGAAAGTGACCTTACGACATCTGACTTCGAGGTTTGCAAACATGGCTTCCAAGAATGTGCAAAGGATTTGAATAAGTTGCTTGATGATATGGTACGATGGGAAGGCAAATTACAACATGAAATCAAAGATTACAACGCGGAATTGTTCGTCCAGTCAGACGTCATTGAAAGCCATTGCGGACCCGGCCACCGTAATATCGAAGAAGAAAATCACGAAAATCTCCTTCAAGATGATAACCAGCCAAATGATCGGAAATTGATTAATAATCAGAAAGTCGAACAATATCTGCATCCATCGCATCCGCCTCTATCTTCGAAAAGGGCGAACCTGGAAGGAAGGAAAAGGAAGGATCGTGAAGCAGCTTTAGATTAA

Protein sequence

MELSNQELTDEHKKDELIEKLLTSLRKERMETFQVERRLTSELFTLWNRNEEKQKKMRDRRLVIKDEGTTSSRKKGKEKLISDYPLAILNDLIARFVDYVDNMKDMTTITNTQKTENGWLDYFKAGIEVFRLINTNLKKLLIKDVSWMKEEDSENYTQVYEKMSRLEKINEILDDCQVTESDLTTSDFEVCKHGFQECAKDLNKLLDDMVRWEGKLQHEIKDYNAELFVQSDVIESHCGPGHRNIEEENHENLLQDDNQPNDRKLINNQKVEQYLHPSHPPLSSKRANLEGRKRKDREAALD
Homology
[Close]
BLAST of Cmc08g0208471 vs. NCBI nr
Match: KAA0052573.1 (hypothetical protein E6C27_scaffold120G001780 [Cucumis melo var. makuwa] >TYK13252.1 hypothetical protein E5676_scaffold255G008700 [Cucumis melo var. makuwa])

HSP 1 Score: 593.6 bits (1529), Expect = 9.7e-166
Identity = 301/302 (99.67%), Postives = 301/302 (99.67%), Query Frame = 0 

Query: 1   MELSNQELTDEHKKDELIEKLLTSLRKERMETFQVERRLTSELFTLWNRNEEKQKKMRDR 60
           MELSNQELTDEHKKDELIEKLLTSLRKERMETFQVERRLTSELFTLWNRNEEKQKKMRDR
Sbjct: 1   MELSNQELTDEHKKDELIEKLLTSLRKERMETFQVERRLTSELFTLWNRNEEKQKKMRDR 60

Query: 61  RLVIKDEGTTSSRKKGKEKLISDYPLAILNDLIARFVDYVDNMKDMTTITNTQKTENGWL 120
           RLVIKDEGTTSSRKKGKEKLISDYPLAILNDLIARFVDYVDNMKDMTTITNTQKTENGWL
Sbjct: 61  RLVIKDEGTTSSRKKGKEKLISDYPLAILNDLIARFVDYVDNMKDMTTITNTQKTENGWL 120

Query: 121 DYFKAGIEVFRLINTNLKKLLIKDVSWMKEEDSENYTQVYEKMSRLEKINEILDDCQVTE 180
           DYFKAGIEVFRLINTNLKKLLIKDVSWMKEED ENYTQVYEKMSRLEKINEILDDCQVTE
Sbjct: 121 DYFKAGIEVFRLINTNLKKLLIKDVSWMKEEDPENYTQVYEKMSRLEKINEILDDCQVTE 180

Query: 181 SDLTTSDFEVCKHGFQECAKDLNKLLDDMVRWEGKLQHEIKDYNAELFVQSDVIESHCGP 240
           SDLTTSDFEVCKHGFQECAKDLNKLLDDMVRWEGKLQHEIKDYNAELFVQSDVIESHCGP
Sbjct: 181 SDLTTSDFEVCKHGFQECAKDLNKLLDDMVRWEGKLQHEIKDYNAELFVQSDVIESHCGP 240

Query: 241 GHRNIEEENHENLLQDDNQPNDRKLINNQKVEQYLHPSHPPLSSKRANLEGRKRKDREAA 300
           GHRNIEEENHENLLQDDNQPNDRKLINNQKVEQYLHPSHPPLSSKRANLEGRKRKDREAA
Sbjct: 241 GHRNIEEENHENLLQDDNQPNDRKLINNQKVEQYLHPSHPPLSSKRANLEGRKRKDREAA 300

Query: 301 LD 303
           LD
Sbjct: 301 LD 302

[Close]
BLAST of Cmc08g0208471 vs. ExPASy TrEMBL
Match: A0A5A7U9J9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008700 PE=4 SV=1)

HSP 1 Score: 593.6 bits (1529), Expect = 4.7e-166
Identity = 301/302 (99.67%), Postives = 301/302 (99.67%), Query Frame = 0 

Query: 1   MELSNQELTDEHKKDELIEKLLTSLRKERMETFQVERRLTSELFTLWNRNEEKQKKMRDR 60
           MELSNQELTDEHKKDELIEKLLTSLRKERMETFQVERRLTSELFTLWNRNEEKQKKMRDR
Sbjct: 1   MELSNQELTDEHKKDELIEKLLTSLRKERMETFQVERRLTSELFTLWNRNEEKQKKMRDR 60

Query: 61  RLVIKDEGTTSSRKKGKEKLISDYPLAILNDLIARFVDYVDNMKDMTTITNTQKTENGWL 120
           RLVIKDEGTTSSRKKGKEKLISDYPLAILNDLIARFVDYVDNMKDMTTITNTQKTENGWL
Sbjct: 61  RLVIKDEGTTSSRKKGKEKLISDYPLAILNDLIARFVDYVDNMKDMTTITNTQKTENGWL 120

Query: 121 DYFKAGIEVFRLINTNLKKLLIKDVSWMKEEDSENYTQVYEKMSRLEKINEILDDCQVTE 180
           DYFKAGIEVFRLINTNLKKLLIKDVSWMKEED ENYTQVYEKMSRLEKINEILDDCQVTE
Sbjct: 121 DYFKAGIEVFRLINTNLKKLLIKDVSWMKEEDPENYTQVYEKMSRLEKINEILDDCQVTE 180

Query: 181 SDLTTSDFEVCKHGFQECAKDLNKLLDDMVRWEGKLQHEIKDYNAELFVQSDVIESHCGP 240
           SDLTTSDFEVCKHGFQECAKDLNKLLDDMVRWEGKLQHEIKDYNAELFVQSDVIESHCGP
Sbjct: 181 SDLTTSDFEVCKHGFQECAKDLNKLLDDMVRWEGKLQHEIKDYNAELFVQSDVIESHCGP 240

Query: 241 GHRNIEEENHENLLQDDNQPNDRKLINNQKVEQYLHPSHPPLSSKRANLEGRKRKDREAA 300
           GHRNIEEENHENLLQDDNQPNDRKLINNQKVEQYLHPSHPPLSSKRANLEGRKRKDREAA
Sbjct: 241 GHRNIEEENHENLLQDDNQPNDRKLINNQKVEQYLHPSHPPLSSKRANLEGRKRKDREAA 300

Query: 301 LD 303
           LD
Sbjct: 301 LD 302

The following BLAST results are available for this feature:
BLAST of Cmc08g0208471 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0052573.19.7e-16699.67hypothetical protein E6C27_scaffold120G001780 [Cucumis melo var. makuwa] >TYK132... [more]
BLAST of Cmc08g0208471 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc08g0208471 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U9J94.7e-16699.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Cmc08g0208471 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..302
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 272..302

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc08g0208471.1Cmc08g0208471.1mRNA