Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAGTAAAGGTAATACCAAATTTAGAAATTGGACGTGTGGTAAAATTGTGTTCCAAGTTATATAAAACTAAGGTTGAATCTCCATTTTTTAAATTTTTTTCCATGTTATTTTTATTAATCTATATAGTTTCCATCAATAAAATTTCTGGGTTGCGTGGTGGTGATCATGATGGGAGGGAGAGAGGTTGAATCAAAATTTACTAAAAATAAAAATTAAAAACAGTTTATCGTATTCGTGTAGTACAAGCTAGCAGGTTCATCAAATGGAACGCTATATGATACCCATGGAGGTCTGAACTTCAATCTAACAGAAGATATGAACATTGAAATTAAAACACACAATTACGAGTTATCAATAAAACCCTTAAACTAATTAACCAACAACAATTAGGGCTGCATATATTAAATAATAACCAAACCAAGTTTAGGGAGAAGAAGATGTTGCAGGAGGAGGGGACAAAAATGGGATGGAAGGGAATGAAGTTGGAATGGTAGGGATTGATGGAAAGTTCGGAAGTGCCATTGTCGGGAGCGGTGGCAACGCTAGCCCGTTCGGAAGCGGAGGGAGATTAACCTTCGGTATTGTAGGTTGTGGTAAATTTGGAAGAGTAGGGTTTGGCAAGGCAGGGAATGGCGGTATCCCGGTTGGAATTGCTGGAAGATTTGGCACCAAGGGCGGAGTGGTTTGCAAAAGATGGCGAGCAGCTTGGCCGAAGTTGATGCTTGAGAGAGCCAAAGTAGCCATAAAGGCAATGATCAAGAACTTTGAAGAAGCCATTTTTTTCCCTTTGAGAAGATGATTTGAAGTTTTTGTTAAGATGAGAGATGAGATGCATTGTAAGGCATCATGATATGTTTATATATTGGTTGGAGCTTTGGTTTAGGATAATTTGGTTGATGAAGGTCGGTGTGTTCTGGCCGCCATGGATATGATCTTGAAAACAAGAAATCTTAGTTTAATTACTTTCTTGAAGAATTTGTTCAACAACTAAATG
mRNA sequence
TAAGTAAAGGTAATACCAAATTTAGAAATTGGACGTGTGGTAAAATTGTGTTCCAAGTTATATAAAACTAAGGTTGAATCTCCATTTTTTAAATTTTTTTCCATGTTATTTTTATTAATCTATATAGTTTCCATCAATAAAATTTCTGGGTTGCGTGGTGGTGATCATGATGGGAGGGAGAGAGGTTGAATCAAAATTTACTAAAAATAAAAATTAAAAACAGTTTATCGTATTCGTGTAGTACAAGCTAGCAGGTTCATCAAATGGAACGCTATATGATACCCATGGAGGTCTGAACTTCAATCTAACAGAAGATATGAACATTGAAATTAAAACACACAATTACGAGTTATCAATAAAACCCTTAAACTAATTAACCAACAACAATTAGGGCTGCATATATTAAATAATAACCAAACCAAGTTTAGGGAGAAGAAGATGTTGCAGGAGGAGGGGACAAAAATGGGATGGAAGGGAATGAAGTTGGAATGGTAGGGATTGATGGAAAGTTCGGAAGTGCCATTGTCGGGAGCGGTGGCAACGCTAGCCCGTTCGGAAGCGGAGGGAGATTAACCTTCGGTATTGTAGGTTGTGGTAAATTTGGAAGAGTAGGGTTTGGCAAGGCAGGGAATGGCGGTATCCCGGTTGGAATTGCTGGAAGATTTGGCACCAAGGGCGGAGTGGTTTGCAAAAGATGGCGAGCAGCTTGGCCGAAGTTGATGCTTGAGAGAGCCAAAGTAGCCATAAAGGCAATGATCAAGAACTTTGAAGAAGCCATTTTTTTCCCTTTGAGAAGATGATTTGAAGTTTTTGTTAAGATGAGAGATGAGATGCATTGTAAGGCATCATGATATGTTTATATATTGGTTGGAGCTTTGGTTTAGGATAATTTGGTTGATGAAGGTCGGTGTGTTCTGGCCGCCATGGATATGATCTTGAAAACAAGAAATCTTAGTTTAATTACTTTCTTGAAGAATTTGTTCAACAACTAAATG
Coding sequence (CDS)
ATGGAAGGGAATGAAGTTGGAATGGTAGGGATTGATGGAAAGTTCGGAAGTGCCATTGTCGGGAGCGGTGGCAACGCTAGCCCGTTCGGAAGCGGAGGGAGATTAACCTTCGGTATTGTAGGTTGTGGTAAATTTGGAAGAGTAGGGTTTGGCAAGGCAGGGAATGGCGGTATCCCGGTTGGAATTGCTGGAAGATTTGGCACCAAGGGCGGAGTGGTTTGCAAAAGATGGCGAGCAGCTTGGCCGAAGTTGATGCTTGAGAGAGCCAAAGTAGCCATAAAGGCAATGATCAAGAACTTTGAAGAAGCCATTTTTTTCCCTTTGAGAAGATGA
Protein sequence
MEGNEVGMVGIDGKFGSAIVGSGGNASPFGSGGRLTFGIVGCGKFGRVGFGKAGNGGIPVGIAGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIKNFEEAIFFPLRR
Homology
BLAST of Cmc07g0194451 vs. NCBI nr
Match:
KAG6576875.1 (hypothetical protein SDJN03_24449, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 125.6 bits (314), Expect = 2.7e-25
Identity = 73/110 (66.36%), Postives = 81/110 (73.64%), Query Frame = 0
Query: 1 MEGNEVGMVGIDGKFGSAIVGSGGNASPFGS-GGRLTFGIVGCGKFGRVGFGKAGNGGIP 60
MEGNE GMVGID AIVGSGG+A+P G G+L G VGCG+FGR AGNGGIP
Sbjct: 118 MEGNEAGMVGID-----AIVGSGGSAAPLGMLTGKLGKGNVGCGRFGR-----AGNGGIP 177
Query: 61 VGIAGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIKNFEEAIFFPLR 110
VG G+FGTK GVVCKRWRAAWP +LERAKVA+K IKN EEAI L+
Sbjct: 178 VGTTGKFGTKDGVVCKRWRAAWPMSILERAKVAMKTTIKNLEEAIEMVLK 217
BLAST of Cmc07g0194451 vs. NCBI nr
Match:
KAG7014899.1 (hypothetical protein SDJN02_22530, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 125.6 bits (314), Expect = 2.7e-25
Identity = 73/110 (66.36%), Postives = 81/110 (73.64%), Query Frame = 0
Query: 1 MEGNEVGMVGIDGKFGSAIVGSGGNASPFGS-GGRLTFGIVGCGKFGRVGFGKAGNGGIP 60
MEGNE GMVGID AIVGSGG+A+P G G+L G VGCG+FGR AGNGGIP
Sbjct: 118 MEGNEAGMVGID-----AIVGSGGSAAPLGMLTGKLGKGNVGCGRFGR-----AGNGGIP 177
Query: 61 VGIAGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIKNFEEAIFFPLR 110
VG G+FGTK GVVCKRWRAAWP +LERAKVA+K IKN EEAI L+
Sbjct: 178 VGTTGKFGTKDGVVCKRWRAAWPMSILERAKVAMKTTIKNLEEAIEMVLK 217
BLAST of Cmc07g0194451 vs. NCBI nr
Match:
XP_022984242.1 (uncharacterized protein LOC111482613 [Cucurbita maxima])
HSP 1 Score: 68.6 bits (166), Expect = 4.0e-08
Identity = 47/111 (42.34%), Postives = 62/111 (55.86%), Query Frame = 0
Query: 2 EGNEVGMVGIDGKFGSAIVGSGGNASP-------FGSGGRLTFG-------IVGCGKFGR 61
+G+ VGM G DGK GS VG+GG A+P GSGG ++ G +VG G G
Sbjct: 28 DGSVVGMDGRDGKVGSEDVGNGGKAAPVGMFIGELGSGGSVSLGSDGVLGPVVGFGNMGN 87
Query: 62 VGFGKAGNGGIPVGIAGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIK 99
G G + +G GI GR G++GG VC+R R A P+ LE AK + A +K
Sbjct: 88 AGRGGSADGLGSDGIGGRVGSEGGAVCRRCRVARPRSTLENAKATMMAKVK 138
BLAST of Cmc07g0194451 vs. NCBI nr
Match:
TYK29414.1 (beta carbonic anhydrase 5 [Cucumis melo var. makuwa])
HSP 1 Score: 68.6 bits (166), Expect = 4.0e-08
Identity = 50/115 (43.48%), Postives = 64/115 (55.65%), Query Frame = 0
Query: 2 EGNEVGMVGIDGKFGSAIVGSGGNAS-------PFGSGGRLTFGIVGCGKFGRVGF---- 61
+G+ VG+ G DGKFGS +VG GGNA+ GSGG ++ G G GKFG G
Sbjct: 291 DGSVVGIDGRDGKFGSEVVGRGGNATLVGMFMGRLGSGGSVSLGREGSGKFGMDGILGPV 350
Query: 62 GKAGNGGIPVGI-AGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIKNFEEAI 105
G G GG G+ + G K G+VC+R R LE AKV +KA +K +EAI
Sbjct: 351 GTGGRGGTADGLGSDGIGGKFGIVCRRCREVRAASTLENAKVTMKARMKQLKEAI 405
BLAST of Cmc07g0194451 vs. NCBI nr
Match:
KAA0044283.1 (beta carbonic anhydrase 5 [Cucumis melo var. makuwa])
HSP 1 Score: 68.6 bits (166), Expect = 4.0e-08
Identity = 50/115 (43.48%), Postives = 64/115 (55.65%), Query Frame = 0
Query: 2 EGNEVGMVGIDGKFGSAIVGSGGNAS-------PFGSGGRLTFGIVGCGKFGRVGF---- 61
+G+ VG+ G DGKFGS +VG GGNA+ GSGG ++ G G GKFG G
Sbjct: 295 DGSVVGIDGRDGKFGSEVVGRGGNATLVGMFMGRLGSGGSVSLGREGSGKFGMDGILGPV 354
Query: 62 GKAGNGGIPVGI-AGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIKNFEEAI 105
G G GG G+ + G K G+VC+R R LE AKV +KA +K +EAI
Sbjct: 355 GTGGRGGTADGLGSDGIGGKFGIVCRRCREVRAASTLENAKVTMKARMKQLKEAI 409
BLAST of Cmc07g0194451 vs. ExPASy TrEMBL
Match:
A0A0A0L0M4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374620 PE=4 SV=1)
HSP 1 Score: 187.6 bits (475), Expect = 2.8e-44
Identity = 94/107 (87.85%), Postives = 98/107 (91.59%), Query Frame = 0
Query: 1 MEGNEVGMVGIDGKFGSAIVGSGGNASPFGSGGRLTFGIVGCGKFGRVGFGKAGNGGIPV 60
MEGNE+GMVGIDGKFGS IVGSGGNASP GSGG+L FG VGCG FGRVGFGK GNGGI V
Sbjct: 1 MEGNEIGMVGIDGKFGSVIVGSGGNASPIGSGGKLIFGNVGCGNFGRVGFGKPGNGGIRV 60
Query: 61 GIAGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIKNFEEAIFFP 108
GIAGRFGTKGGVVC+RWRAAWPKLMLERAKVA+KAMIKN E AIFFP
Sbjct: 61 GIAGRFGTKGGVVCERWRAAWPKLMLERAKVAVKAMIKNLEVAIFFP 107
BLAST of Cmc07g0194451 vs. ExPASy TrEMBL
Match:
A0A0A0L399 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374640 PE=4 SV=1)
HSP 1 Score: 183.0 bits (463), Expect = 7.0e-43
Identity = 92/107 (85.98%), Postives = 96/107 (89.72%), Query Frame = 0
Query: 1 MEGNEVGMVGIDGKFGSAIVGSGGNASPFGSGGRLTFGIVGCGKFGRVGFGKAGNGGIPV 60
MEGNE+GMVGI G FGS IVGSGGNASP GSGG+L FG VGCG FGRVGFGK GNGGI V
Sbjct: 1 MEGNEIGMVGIGGNFGSVIVGSGGNASPIGSGGKLIFGNVGCGNFGRVGFGKPGNGGIRV 60
Query: 61 GIAGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIKNFEEAIFFP 108
GIAGRFGTKGGVVC+RWRAAWPKLMLERAKVA+KAMIKN E AIFFP
Sbjct: 61 GIAGRFGTKGGVVCERWRAAWPKLMLERAKVAVKAMIKNLEVAIFFP 107
BLAST of Cmc07g0194451 vs. ExPASy TrEMBL
Match:
A0A0A0KYM4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G375140 PE=4 SV=1)
HSP 1 Score: 178.3 bits (451), Expect = 1.7e-41
Identity = 89/101 (88.12%), Postives = 93/101 (92.08%), Query Frame = 0
Query: 1 MEGNEVGMVGIDGKFGSAIVGSGGNASPFGSGGRLTFGIVGCGKFGRVGFGKAGNGGIPV 60
MEGNE+GMVGIDGKFGS IVGSGGN SP SGG+LTFG VGCGKFGRVGFGK GNGGI V
Sbjct: 1 MEGNEIGMVGIDGKFGSVIVGSGGNGSPIESGGKLTFGNVGCGKFGRVGFGKPGNGGIRV 60
Query: 61 GIAGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIKNFE 102
GIAGRFGTKGGVVC+RWR AWPKLMLERAKVA+KAMIKNFE
Sbjct: 61 GIAGRFGTKGGVVCQRWRVAWPKLMLERAKVAVKAMIKNFE 101
BLAST of Cmc07g0194451 vs. ExPASy TrEMBL
Match:
A0A6J1J1P5 (uncharacterized protein LOC111482613 OS=Cucurbita maxima OX=3661 GN=LOC111482613 PE=4 SV=1)
HSP 1 Score: 68.6 bits (166), Expect = 1.9e-08
Identity = 47/111 (42.34%), Postives = 62/111 (55.86%), Query Frame = 0
Query: 2 EGNEVGMVGIDGKFGSAIVGSGGNASP-------FGSGGRLTFG-------IVGCGKFGR 61
+G+ VGM G DGK GS VG+GG A+P GSGG ++ G +VG G G
Sbjct: 28 DGSVVGMDGRDGKVGSEDVGNGGKAAPVGMFIGELGSGGSVSLGSDGVLGPVVGFGNMGN 87
Query: 62 VGFGKAGNGGIPVGIAGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIK 99
G G + +G GI GR G++GG VC+R R A P+ LE AK + A +K
Sbjct: 88 AGRGGSADGLGSDGIGGRVGSEGGAVCRRCRVARPRSTLENAKATMMAKVK 138
BLAST of Cmc07g0194451 vs. ExPASy TrEMBL
Match:
A0A5D3E0R8 (Carbonic anhydrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00040 PE=3 SV=1)
HSP 1 Score: 68.6 bits (166), Expect = 1.9e-08
Identity = 50/115 (43.48%), Postives = 64/115 (55.65%), Query Frame = 0
Query: 2 EGNEVGMVGIDGKFGSAIVGSGGNAS-------PFGSGGRLTFGIVGCGKFGRVGF---- 61
+G+ VG+ G DGKFGS +VG GGNA+ GSGG ++ G G GKFG G
Sbjct: 291 DGSVVGIDGRDGKFGSEVVGRGGNATLVGMFMGRLGSGGSVSLGREGSGKFGMDGILGPV 350
Query: 62 GKAGNGGIPVGI-AGRFGTKGGVVCKRWRAAWPKLMLERAKVAIKAMIKNFEEAI 105
G G GG G+ + G K G+VC+R R LE AKV +KA +K +EAI
Sbjct: 351 GTGGRGGTADGLGSDGIGGKFGIVCRRCREVRAASTLENAKVTMKARMKQLKEAI 405
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG6576875.1 | 2.7e-25 | 66.36 | hypothetical protein SDJN03_24449, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG7014899.1 | 2.7e-25 | 66.36 | hypothetical protein SDJN02_22530, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| XP_022984242.1 | 4.0e-08 | 42.34 | uncharacterized protein LOC111482613 [Cucurbita maxima] | [more] |
| TYK29414.1 | 4.0e-08 | 43.48 | beta carbonic anhydrase 5 [Cucumis melo var. makuwa] | [more] |
| KAA0044283.1 | 4.0e-08 | 43.48 | beta carbonic anhydrase 5 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L0M4 | 2.8e-44 | 87.85 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374620 PE=4 SV=1 | [more] |
| A0A0A0L399 | 7.0e-43 | 85.98 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374640 PE=4 SV=1 | [more] |
| A0A0A0KYM4 | 1.7e-41 | 88.12 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G375140 PE=4 SV=1 | [more] |
| A0A6J1J1P5 | 1.9e-08 | 42.34 | uncharacterized protein LOC111482613 OS=Cucurbita maxima OX=3661 GN=LOC111482613... | [more] |
| A0A5D3E0R8 | 1.9e-08 | 43.48 | Carbonic anhydrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G0... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
