Cmc07g0190341 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0190341
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr07: 9427015 .. 9428022 (+)
RNA-Seq Expression	Cmc07g0190341
Synteny	Cmc07g0190341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTAGAAACTGATGATACTTACAAGACTGATGAGAAAGAGGAAGGAGATGAAGCGAATATCCCTATGATTCGGTTCTTACTACAACAGTACATAGATATTTTTACCACACCAAAGGGACTCCCTCCAAAGAGAGATATCGACCACAGGATATTGACACTACCCGACCAAAAGCCGATCAATGTAAGACCATATAAATATGGACATATCCAAAAAGGGGAGATAGAGAAGTTAGTAGCTGAAATGCTGCAAGATGGTGTCATCCGCCCAAGCCGAAGCCCATATTCCAGCCCTGTTCTCCTGGTTAAGAAGAAAGATGGGGGGTGGCGTTTTTGTGTTGATTACCGGAAGTTGAATCAAGCTACAATCTCAGATAAATTTCCTATCCCGGTGATTGAAGAACTATTAGATGAGTTATATGGAGCAGCAGTTTTCTCTAAACTGGACCTCAAATCAGGTTACCACCAAATTAGAATGAAGGAAGAAGATATAGAGAAGACAGCGTTTCGCACCCATGAAGGCCATTATGAATTCCTAGTGATGCCTTTCGGTCTCACCAACGCACCAGCAACGTTTCAATCACTGATGAATCAGGTTTTCAAGCCCTTCCTTAGACGCTGTGTTTTGGTATTTTTTGATGATATCTTAGTATATAGCAGGGACATCACTGAACATGAGAAACACCTAGGGATGGTTTTTGCTGTGTTAAGGGATAATCAACTCTATGCCAATCACAAGAAATGTGTGTTTGCTCATTCTAAAATCCAATATTTGGGACACCAAATATCTAAGGCAGGGGTAGAGGCAGATGAAGATAAAATTAGAAGTATGGTAAATTGGCCAAGACCTTCAGATGTGACCGAATTAAGAGGATTTCTGGGGCTGACTGGATATTACCGAAGGTTTGTTAAGGGTTACAGCAACATTGCAACCCCCTTACTAAACTATTACAGAAAAATGCTTTTAAATGGAATGAAGACGCTGAAACAGCATTCGTCAGGCTGA

mRNA sequence

ATGGAAGTAGAAACTGATGATACTTACAAGACTGATGAGAAAGAGGAAGGAGATGAAGCGAATATCCCTATGATTCGGTTCTTACTACAACAGTACATAGATATTTTTACCACACCAAAGGGACTCCCTCCAAAGAGAGATATCGACCACAGGATATTGACACTACCCGACCAAAAGCCGATCAATGTAAGACCATATAAATATGGACATATCCAAAAAGGGGAGATAGAGAAGTTAGTAGCTGAAATGCTGCAAGATGGTGTCATCCGCCCAAGCCGAAGCCCATATTCCAGCCCTGTTCTCCTGGTTAAGAAGAAAGATGGGGGGTGGCGTTTTTGTGTTGATTACCGGAAGTTGAATCAAGCTACAATCTCAGATAAATTTCCTATCCCGGTGATTGAAGAACTATTAGATGAGTTATATGGAGCAGCAGTTTTCTCTAAACTGGACCTCAAATCAGGTTACCACCAAATTAGAATGAAGGAAGAAGATATAGAGAAGACAGCGTTTCGCACCCATGAAGGCCATTATGAATTCCTAGTGATGCCTTTCGGTCTCACCAACGCACCAGCAACGTTTCAATCACTGATGAATCAGGTTTTCAAGCCCTTCCTTAGACGCTGTGTTTTGGTATTTTTTGATGATATCTTAGTATATAGCAGGGACATCACTGAACATGAGAAACACCTAGGGATGGTTTTTGCTGTGTTAAGGGATAATCAACTCTATGCCAATCACAAGAAATGTGTGTTTGCTCATTCTAAAATCCAATATTTGGGACACCAAATATCTAAGGCAGGGGTAGAGGCAGATGAAGATAAAATTAGAAGTATGGTAAATTGGCCAAGACCTTCAGATGTGACCGAATTAAGAGGATTTCTGGGGCTGACTGGATATTACCGAAGGTTTGTTAAGGGTTACAGCAACATTGCAACCCCCTTACTAAACTATTACAGAAAAATGCTTTTAAATGGAATGAAGACGCTGAAACAGCATTCGTCAGGCTGA

Coding sequence (CDS)

ATGGAAGTAGAAACTGATGATACTTACAAGACTGATGAGAAAGAGGAAGGAGATGAAGCGAATATCCCTATGATTCGGTTCTTACTACAACAGTACATAGATATTTTTACCACACCAAAGGGACTCCCTCCAAAGAGAGATATCGACCACAGGATATTGACACTACCCGACCAAAAGCCGATCAATGTAAGACCATATAAATATGGACATATCCAAAAAGGGGAGATAGAGAAGTTAGTAGCTGAAATGCTGCAAGATGGTGTCATCCGCCCAAGCCGAAGCCCATATTCCAGCCCTGTTCTCCTGGTTAAGAAGAAAGATGGGGGGTGGCGTTTTTGTGTTGATTACCGGAAGTTGAATCAAGCTACAATCTCAGATAAATTTCCTATCCCGGTGATTGAAGAACTATTAGATGAGTTATATGGAGCAGCAGTTTTCTCTAAACTGGACCTCAAATCAGGTTACCACCAAATTAGAATGAAGGAAGAAGATATAGAGAAGACAGCGTTTCGCACCCATGAAGGCCATTATGAATTCCTAGTGATGCCTTTCGGTCTCACCAACGCACCAGCAACGTTTCAATCACTGATGAATCAGGTTTTCAAGCCCTTCCTTAGACGCTGTGTTTTGGTATTTTTTGATGATATCTTAGTATATAGCAGGGACATCACTGAACATGAGAAACACCTAGGGATGGTTTTTGCTGTGTTAAGGGATAATCAACTCTATGCCAATCACAAGAAATGTGTGTTTGCTCATTCTAAAATCCAATATTTGGGACACCAAATATCTAAGGCAGGGGTAGAGGCAGATGAAGATAAAATTAGAAGTATGGTAAATTGGCCAAGACCTTCAGATGTGACCGAATTAAGAGGATTTCTGGGGCTGACTGGATATTACCGAAGGTTTGTTAAGGGTTACAGCAACATTGCAACCCCCTTACTAAACTATTACAGAAAAATGCTTTTAAATGGAATGAAGACGCTGAAACAGCATTCGTCAGGCTGA

Protein sequence

MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKPINVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYYRRFVKGYSNIATPLLNYYRKMLLNGMKTLKQHSSG

Homology

[Close]

BLAST of Cmc07g0190341 vs. NCBI nr
Match: KAA0061073.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 638.3 bits (1645), Expect = 3.8e-179
Identity = 310/320 (96.88%), Postives = 313/320 (97.81%), Query Frame = 0


Query: 1   MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKP 60
           MEVETDDTYKTDEKEEGDEA+IPMIRFLLQQY DIFTTPKGLPPKRDIDHRILTLPDQKP
Sbjct: 538 MEVETDDTYKTDEKEEGDEADIPMIRFLLQQYKDIFTTPKGLPPKRDIDHRILTLPDQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 657

Query: 121 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 180
           QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEED+EKTAFRTHEGHYEFL
Sbjct: 658 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDVEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDI E EKHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDIIEREKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 300
           QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY
Sbjct: 778 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 837

Query: 301 RRFVKGYSNIATPLLNYYRK 321
           RRFVKGYSNIATPL    +K
Sbjct: 838 RRFVKGYSNIATPLTKLLQK 857

[Close]

BLAST of Cmc07g0190341 vs. NCBI nr
Match: KAA0055376.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 632.5 bits (1630), Expect = 2.1e-177
Identity = 308/320 (96.25%), Postives = 312/320 (97.50%), Query Frame = 0


Query: 1   MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKP 60
           M+VETDDTYKTDEKEEGDEA+IPMIRFLLQQY DIFTTPKGLPPKRDIDHRILTLPDQKP
Sbjct: 538 MKVETDDTYKTDEKEEGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPDQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKK+GGWRFCVDYRKLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKNGGWRFCVDYRKLN 657

Query: 121 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 180
           QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL
Sbjct: 658 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFF DILVYSRDITEHEKHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFYDILVYSRDITEHEKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 300
           QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRP DVTELRGFL LTGYY
Sbjct: 778 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPLDVTELRGFLRLTGYY 837

Query: 301 RRFVKGYSNIATPLLNYYRK 321
           RRFVKGYSNIATPL    +K
Sbjct: 838 RRFVKGYSNIATPLTKLLQK 857

[Close]

BLAST of Cmc07g0190341 vs. NCBI nr
Match: TYJ99303.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 632.5 bits (1630), Expect = 2.1e-177
Identity = 308/320 (96.25%), Postives = 312/320 (97.50%), Query Frame = 0


Query: 1   MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKP 60
           M+VETDDTYKTDEKEEGDEA+IPMIRFLLQQY DIFTTPKGLPPKRDIDHRILTLPDQKP
Sbjct: 538 MKVETDDTYKTDEKEEGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPDQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKK+GGWRFCVDYRKLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKNGGWRFCVDYRKLN 657

Query: 121 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 180
           QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL
Sbjct: 658 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFF DILVYSRDITEHEKHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFYDILVYSRDITEHEKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 300
           QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRP DVTELRGFL LTGYY
Sbjct: 778 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPLDVTELRGFLRLTGYY 837

Query: 301 RRFVKGYSNIATPLLNYYRK 321
           RRFVKGYSNIATPL    +K
Sbjct: 838 RRFVKGYSNIATPLTKLLQK 857

[Close]

BLAST of Cmc07g0190341 vs. NCBI nr
Match: KAA0039128.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK26985.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 622.9 bits (1605), Expect = 1.7e-174
Identity = 300/320 (93.75%), Postives = 310/320 (96.88%), Query Frame = 0


Query: 1   MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKP 60
           MEVET+DTYKTDEKE+GDEA+IPMIRFLLQQY DIFTTPK LPPKRDIDHRILTLP+QKP
Sbjct: 538 MEVETEDTYKTDEKEKGDEADIPMIRFLLQQYTDIFTTPKDLPPKRDIDHRILTLPNQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDG+IRPSRSPYSSPVLLVKKKDGGWRFCVDY KLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYSSPVLLVKKKDGGWRFCVDYWKLN 657

Query: 121 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 180
           QAT+SDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL
Sbjct: 658 QATVSDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDIL YS DITEH+KHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILAYSSDITEHKKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 300
            LYANHKKCVFAHS+IQYLGHQISKAGVEADEDKIRSMV+WPRPSDVTELRGFLGLTGYY
Sbjct: 778 HLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMVDWPRPSDVTELRGFLGLTGYY 837

Query: 301 RRFVKGYSNIATPLLNYYRK 321
           RRFVKGYSNIATPL    +K
Sbjct: 838 RRFVKGYSNIATPLTKLLQK 857

[Close]

BLAST of Cmc07g0190341 vs. NCBI nr
Match: TYK14624.1 (uncharacterized protein E5676_scaffold1275G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 617.1 bits (1590), Expect = 9.1e-173
Identity = 294/320 (91.88%), Postives = 309/320 (96.56%), Query Frame = 0


Query: 1   MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKP 60
           MEVE ++ YKTD+KE+GDEA+IPMIRFLLQQY DIFTTPKGLPPKRDIDHRILTLP+Q+P
Sbjct: 293 MEVEVEEIYKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQRP 352

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 120
           INVRPYKYGH+QKGEIE LVAEMLQDG+IRPSRSPYSS VLLVKKKDGGWRFCVDYRKLN
Sbjct: 353 INVRPYKYGHVQKGEIENLVAEMLQDGIIRPSRSPYSSLVLLVKKKDGGWRFCVDYRKLN 412

Query: 121 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 180
           QAT+SDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL
Sbjct: 413 QATVSDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 472

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYS D+TEHEKHLGM+FAVLRDN
Sbjct: 473 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDLTEHEKHLGMIFAVLRDN 532

Query: 241 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 300
           QLYANHKKCVFAHS+IQYLGHQISKAGVEAD+DKIRSMVNWPRPSDVTELRGFLGLTGYY
Sbjct: 533 QLYANHKKCVFAHSRIQYLGHQISKAGVEADDDKIRSMVNWPRPSDVTELRGFLGLTGYY 592

Query: 301 RRFVKGYSNIATPLLNYYRK 321
           RRFVKGYSNI TPL    +K
Sbjct: 593 RRFVKGYSNIVTPLTKLLQK 612

[Close]

BLAST of Cmc07g0190341 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 7.2e-64
Identity = 126/307 (41.04%), Postives = 187/307 (60.91%), Query Frame = 0


Query: 24  MIRFLLQQYIDIFTTP-KGLPPKRDIDHRILTLPDQKPINVRPYKYGHIQKGEIEKLVAE 83
           ++  LL ++  IF  P  G+  +  +   I T   Q PI  + Y Y    +GE+E+ + E
Sbjct: 87  ILNSLLGEFPRIFEPPLSGMSVETAVKAEIRT-NTQDPIYAKSYPYPVNMRGEVERQIDE 146

Query: 84  MLQDGVIRPSRSPYSSPVLLVKKK-----DGGWRFCVDYRKLNQATISDKFPIPVIEELL 143
           +LQDG+IRPS SPY+SP+ +V KK     +  +R  VD+++LN  TI D +PIP I   L
Sbjct: 147 LLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATL 206

Query: 144 DELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLM 203
             L  A  F+ LDL SG+HQI MKE DI KTAF T  G YEFL +PFGL NAPA FQ ++
Sbjct: 207 ASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMI 266

Query: 204 NQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSKIQ 263
           + + +  + +   V+ DDI+V+S D   H K+L +V A L    L  N +K  F  ++++
Sbjct: 267 DDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVE 326

Query: 264 YLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYYRRFVKGYSNIATPLLNY 323
           +LG+ ++  G++AD  K+R++   P P+ V EL+ FLG+T YYR+F++ Y+ +A PL N 
Sbjct: 327 FLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNL 386

Query: 324 YRKMLLN 325
            R +  N
Sbjct: 387 TRGLYAN 392

[Close]

BLAST of Cmc07g0190341 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.6e-63
Identity = 117/274 (42.70%), Postives = 169/274 (61.68%), Query Frame = 0


Query: 52  ILTLPDQKPINVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGG-- 111
           +L      PI  + Y      + E+E  V EML  G+IR S SPY+SP  +V KK     
Sbjct: 198 VLNTTHNSPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASG 257

Query: 112 ---WRFCVDYRKLNQATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIE 171
              +R  +DYRKLN+ TI D++PIP ++E+L +L     F+ +DL  G+HQI M EE I 
Sbjct: 258 ANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESIS 317

Query: 172 KTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEH 231
           KTAF T  GHYE+L MPFGL NAPATFQ  MN + +P L +  LV+ DDI+++S  +TEH
Sbjct: 318 KTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEH 377

Query: 232 EKHLGMVFAVLRDNQLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSD 291
              + +VF  L D  L     KC F   +  +LGH ++  G++ +  K++++V++P P+ 
Sbjct: 378 LNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTK 437

Query: 292 VTELRGFLGLTGYYRRFVKGYSNIATPLLNYYRK 321
             E+R FLGLTGYYR+F+  Y++IA P+ +  +K
Sbjct: 438 DKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKK 471

[Close]

BLAST of Cmc07g0190341 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 2.2e-60
Identity = 109/260 (41.92%), Postives = 161/260 (61.92%), Query Frame = 0


Query: 66  YKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGG-----WRFCVDYRKLN 125
           Y Y    + E+E  + +ML  G+IR S SPY+SP+ +V KK        +R  +DYRKLN
Sbjct: 213 YSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLN 272

Query: 126 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 185
           + T+ D+ PIP ++E+L +L     F+ +DL  G+HQI M  E + KTAF T  GHYE+L
Sbjct: 273 EITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYL 332

Query: 186 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 245
            MPFGL NAPATFQ  MN + +P L +  LV+ DDI+V+S  + EH + LG+VF  L   
Sbjct: 333 RMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKA 392

Query: 246 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 305
            L     KC F   +  +LGH ++  G++ + +KI ++  +P P+   E++ FLGLTGYY
Sbjct: 393 NLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYY 452

Query: 306 RRFVKGYSNIATPLLNYYRK 321
           R+F+  +++IA P+    +K
Sbjct: 453 RKFIPNFADIAKPMTKCLKK 472

[Close]

BLAST of Cmc07g0190341 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 230.7 bits (587), Expect = 2.4e-59
Identity = 128/318 (40.25%), Postives = 182/318 (57.23%), Query Frame = 0


Query: 3   VETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKR------DIDHRILTLP 62
           +++ +   TD   +     +P+  +L Q+Y +I      LPP+        + H I   P
Sbjct: 537 IQSVEPNATDHSNKDTFCTLPV--WLQQKYREIIR--NDLPPRPADINNIPVKHDIEIKP 596

Query: 63  DQKPINVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDY 122
             +   ++PY      + EI K+V ++L +  I PS+SP SSPV+LV KKDG +R CVDY
Sbjct: 597 GARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDY 656

Query: 123 RKLNQATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGH 182
           R LN+ATISD FP+P I+ LL  +  A +F+ LDL SGYHQI M+ +D  KTAF T  G 
Sbjct: 657 RTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGK 716

Query: 183 YEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAV 242
           YE+ VMPFGL NAP+TF   M   F+    R V V+ DDIL++S    EH KHL  V   
Sbjct: 717 YEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLER 776

Query: 243 LRDNQLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGL 302
           L++  L    KKC FA  + ++LG+ I    +   + K  ++ ++P P  V + + FLG+
Sbjct: 777 LKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGM 836

Query: 303 TGYYRRFVKGYSNIATPL 315
             YYRRF+   S IA P+
Sbjct: 837 INYYRRFIPNCSKIAQPI 848

[Close]

BLAST of Cmc07g0190341 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 230.7 bits (587), Expect = 2.4e-59
Identity = 128/318 (40.25%), Postives = 182/318 (57.23%), Query Frame = 0


Query: 3   VETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKR------DIDHRILTLP 62
           +++ +   TD   +     +P+  +L Q+Y +I      LPP+        + H I   P
Sbjct: 563 IQSVEPNATDHSNKDTFCTLPV--WLQQKYREIIR--NDLPPRPADINNIPVKHDIEIKP 622

Query: 63  DQKPINVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDY 122
             +   ++PY      + EI K+V ++L +  I PS+SP SSPV+LV KKDG +R CVDY
Sbjct: 623 GARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDY 682

Query: 123 RKLNQATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGH 182
           R LN+ATISD FP+P I+ LL  +  A +F+ LDL SGYHQI M+ +D  KTAF T  G 
Sbjct: 683 RTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGK 742

Query: 183 YEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAV 242
           YE+ VMPFGL NAP+TF   M   F+    R V V+ DDIL++S    EH KHL  V   
Sbjct: 743 YEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLER 802

Query: 243 LRDNQLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGL 302
           L++  L    KKC FA  + ++LG+ I    +   + K  ++ ++P P  V + + FLG+
Sbjct: 803 LKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGM 862

Query: 303 TGYYRRFVKGYSNIATPL 315
             YYRRF+   S IA P+
Sbjct: 863 INYYRRFIPNCSKIAQPI 874

[Close]

BLAST of Cmc07g0190341 vs. ExPASy TrEMBL
Match: A0A5A7UYM1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G002110 PE=4 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 1.8e-179
Identity = 310/320 (96.88%), Postives = 313/320 (97.81%), Query Frame = 0


Query: 1   MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKP 60
           MEVETDDTYKTDEKEEGDEA+IPMIRFLLQQY DIFTTPKGLPPKRDIDHRILTLPDQKP
Sbjct: 538 MEVETDDTYKTDEKEEGDEADIPMIRFLLQQYKDIFTTPKGLPPKRDIDHRILTLPDQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 657

Query: 121 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 180
           QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEED+EKTAFRTHEGHYEFL
Sbjct: 658 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDVEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDI E EKHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDIIEREKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 300
           QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY
Sbjct: 778 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 837

Query: 301 RRFVKGYSNIATPLLNYYRK 321
           RRFVKGYSNIATPL    +K
Sbjct: 838 RRFVKGYSNIATPLTKLLQK 857

[Close]

BLAST of Cmc07g0190341 vs. ExPASy TrEMBL
Match: A0A5A7UM77 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002210 PE=4 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 1.0e-177
Identity = 308/320 (96.25%), Postives = 312/320 (97.50%), Query Frame = 0


Query: 1   MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKP 60
           M+VETDDTYKTDEKEEGDEA+IPMIRFLLQQY DIFTTPKGLPPKRDIDHRILTLPDQKP
Sbjct: 538 MKVETDDTYKTDEKEEGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPDQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKK+GGWRFCVDYRKLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKNGGWRFCVDYRKLN 657

Query: 121 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 180
           QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL
Sbjct: 658 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFF DILVYSRDITEHEKHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFYDILVYSRDITEHEKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 300
           QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRP DVTELRGFL LTGYY
Sbjct: 778 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPLDVTELRGFLRLTGYY 837

Query: 301 RRFVKGYSNIATPLLNYYRK 321
           RRFVKGYSNIATPL    +K
Sbjct: 838 RRFVKGYSNIATPLTKLLQK 857

[Close]

BLAST of Cmc07g0190341 vs. ExPASy TrEMBL
Match: A0A5D3BJ50 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005160 PE=4 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 1.0e-177
Identity = 308/320 (96.25%), Postives = 312/320 (97.50%), Query Frame = 0


Query: 1   MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKP 60
           M+VETDDTYKTDEKEEGDEA+IPMIRFLLQQY DIFTTPKGLPPKRDIDHRILTLPDQKP
Sbjct: 538 MKVETDDTYKTDEKEEGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPDQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKK+GGWRFCVDYRKLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKNGGWRFCVDYRKLN 657

Query: 121 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 180
           QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL
Sbjct: 658 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFF DILVYSRDITEHEKHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFYDILVYSRDITEHEKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 300
           QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRP DVTELRGFL LTGYY
Sbjct: 778 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPLDVTELRGFLRLTGYY 837

Query: 301 RRFVKGYSNIATPLLNYYRK 321
           RRFVKGYSNIATPL    +K
Sbjct: 838 RRFVKGYSNIATPLTKLLQK 857

[Close]

BLAST of Cmc07g0190341 vs. ExPASy TrEMBL
Match: A0A5A7T8C0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold322G00570 PE=4 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 8.0e-175
Identity = 300/320 (93.75%), Postives = 310/320 (96.88%), Query Frame = 0


Query: 1   MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKP 60
           MEVET+DTYKTDEKE+GDEA+IPMIRFLLQQY DIFTTPK LPPKRDIDHRILTLP+QKP
Sbjct: 538 MEVETEDTYKTDEKEKGDEADIPMIRFLLQQYTDIFTTPKDLPPKRDIDHRILTLPNQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDG+IRPSRSPYSSPVLLVKKKDGGWRFCVDY KLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYSSPVLLVKKKDGGWRFCVDYWKLN 657

Query: 121 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 180
           QAT+SDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL
Sbjct: 658 QATVSDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDIL YS DITEH+KHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILAYSSDITEHKKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 300
            LYANHKKCVFAHS+IQYLGHQISKAGVEADEDKIRSMV+WPRPSDVTELRGFLGLTGYY
Sbjct: 778 HLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMVDWPRPSDVTELRGFLGLTGYY 837

Query: 301 RRFVKGYSNIATPLLNYYRK 321
           RRFVKGYSNIATPL    +K
Sbjct: 838 RRFVKGYSNIATPLTKLLQK 857

[Close]

BLAST of Cmc07g0190341 vs. ExPASy TrEMBL
Match: A0A5D3E0Q7 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00130 PE=4 SV=1)

HSP 1 Score: 617.1 bits (1590), Expect = 4.4e-173
Identity = 294/320 (91.88%), Postives = 310/320 (96.88%), Query Frame = 0


Query: 1   MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKP 60
           MEVE ++ YKTD+KE+GDEA+IPMIRFLLQQY DIFTTPKGLPPKRDIDHRILTLP+Q+P
Sbjct: 293 MEVEVEEIYKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQRP 352

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 120
           INVRPYKYGH+QKGEIE LVAEMLQDG+IRPSRSPYSS VLLVKKKDGGWRFCVDYRKLN
Sbjct: 353 INVRPYKYGHVQKGEIENLVAEMLQDGIIRPSRSPYSSLVLLVKKKDGGWRFCVDYRKLN 412

Query: 121 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 180
           QAT+SDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL
Sbjct: 413 QATVSDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 472

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYS D+TEHEKHLGM+FAVLRDN
Sbjct: 473 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDLTEHEKHLGMIFAVLRDN 532

Query: 241 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 300
           QLYANHKKCVFAHS+IQYLGHQISKAGVEAD+DKIRSMVNWPRPSDVTELRGFLGLTGYY
Sbjct: 533 QLYANHKKCVFAHSRIQYLGHQISKAGVEADDDKIRSMVNWPRPSDVTELRGFLGLTGYY 592

Query: 301 RRFVKGYSNIATPLLNYYRK 321
           R+FVKGYSNIATPL    +K
Sbjct: 593 RQFVKGYSNIATPLTKLLQK 612

[Close]

BLAST of Cmc07g0190341 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-24
Identity = 53/94 (56.38%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 229 HLGMVFAVLRDNQLYANHKKCVFAHSKIQYLGHQ--ISKAGVEADEDKIRSMVNWPRPSD 288
           HLGMV  +   +Q YAN KKC F   +I YLGH+  IS  GV AD  K+ +MV WP P +
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 289 VTELRGFLGLTGYYRRFVKGYSNIATPLLNYYRK 321
            TELRGFLGLTGYYRRFVK Y  I  PL    +K
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKK 96

[Close]

BLAST of Cmc07g0190341 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 4.9e-07
Identity = 22/40 (55.00%), Postives = 32/40 (80.00%), Query Frame = 0


Query: 71  IQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGW 111
           +++  ++  + EML+  +I+PS SPYSSPVLLV+KKDGGW
Sbjct: 40  LRRTRLKNWLGEMLEARIIQPSISPYSSPVLLVQKKDGGW 79

The following BLAST results are available for this feature:

BLAST of Cmc07g0190341 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061073.1	3.8e-179	96.88	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0055376.1	2.1e-177	96.25	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYJ99303.1	2.1e-177	96.25	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0039128.1	1.7e-174	93.75	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK26985.1 Ty3/gyp...	[more]
TYK14624.1	9.1e-173	91.88	uncharacterized protein E5676_scaffold1275G00160 [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0190341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8I7P9	7.2e-64	41.04	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P20825	1.6e-63	42.70	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	2.2e-60	41.92	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q99315	2.4e-59	40.25	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	2.4e-59	40.25	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc07g0190341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UYM1	1.8e-179	96.88	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7UM77	1.0e-177	96.25	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BJ50	1.0e-177	96.25	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7T8C0	8.0e-175	93.75	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3E0Q7	4.4e-173	91.88	Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of Cmc07g0190341 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.2e-24	56.38	DNA/RNA polymerases superfamily protein	[more]
ATMG00850.1	4.9e-07	55.00	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 103..263 e-value: 1.8E-32 score: 112.7
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 84..263 score: 16.19376
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 48..188 e-value: 9.1E-91 score: 304.9
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 7..214
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 7..214
None	No IPR available	CDD	cd01647	RT_LTR	coord: 87..261 e-value: 1.26588E-98 score: 286.799
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 272..333 e-value: 3.6E-14 score: 54.5
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 128..263 e-value: 9.1E-91 score: 304.9
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 29..320

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0190341.1	Cmc07g0190341.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding