Cmc07g0190341 (gene) Melon (Charmono) v1.1

Overview
NameCmc07g0190341
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3/gypsy retrotransposon protein
LocationCMiso1.1chr07: 9427015 .. 9428022 (+)
RNA-Seq ExpressionCmc07g0190341
SyntenyCmc07g0190341
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTAGAAACTGATGATACTTACAAGACTGATGAGAAAGAGGAAGGAGATGAAGCGAATATCCCTATGATTCGGTTCTTACTACAACAGTACATAGATATTTTTACCACACCAAAGGGACTCCCTCCAAAGAGAGATATCGACCACAGGATATTGACACTACCCGACCAAAAGCCGATCAATGTAAGACCATATAAATATGGACATATCCAAAAAGGGGAGATAGAGAAGTTAGTAGCTGAAATGCTGCAAGATGGTGTCATCCGCCCAAGCCGAAGCCCATATTCCAGCCCTGTTCTCCTGGTTAAGAAGAAAGATGGGGGGTGGCGTTTTTGTGTTGATTACCGGAAGTTGAATCAAGCTACAATCTCAGATAAATTTCCTATCCCGGTGATTGAAGAACTATTAGATGAGTTATATGGAGCAGCAGTTTTCTCTAAACTGGACCTCAAATCAGGTTACCACCAAATTAGAATGAAGGAAGAAGATATAGAGAAGACAGCGTTTCGCACCCATGAAGGCCATTATGAATTCCTAGTGATGCCTTTCGGTCTCACCAACGCACCAGCAACGTTTCAATCACTGATGAATCAGGTTTTCAAGCCCTTCCTTAGACGCTGTGTTTTGGTATTTTTTGATGATATCTTAGTATATAGCAGGGACATCACTGAACATGAGAAACACCTAGGGATGGTTTTTGCTGTGTTAAGGGATAATCAACTCTATGCCAATCACAAGAAATGTGTGTTTGCTCATTCTAAAATCCAATATTTGGGACACCAAATATCTAAGGCAGGGGTAGAGGCAGATGAAGATAAAATTAGAAGTATGGTAAATTGGCCAAGACCTTCAGATGTGACCGAATTAAGAGGATTTCTGGGGCTGACTGGATATTACCGAAGGTTTGTTAAGGGTTACAGCAACATTGCAACCCCCTTACTAAACTATTACAGAAAAATGCTTTTAAATGGAATGAAGACGCTGAAACAGCATTCGTCAGGCTGA

mRNA sequence

ATGGAAGTAGAAACTGATGATACTTACAAGACTGATGAGAAAGAGGAAGGAGATGAAGCGAATATCCCTATGATTCGGTTCTTACTACAACAGTACATAGATATTTTTACCACACCAAAGGGACTCCCTCCAAAGAGAGATATCGACCACAGGATATTGACACTACCCGACCAAAAGCCGATCAATGTAAGACCATATAAATATGGACATATCCAAAAAGGGGAGATAGAGAAGTTAGTAGCTGAAATGCTGCAAGATGGTGTCATCCGCCCAAGCCGAAGCCCATATTCCAGCCCTGTTCTCCTGGTTAAGAAGAAAGATGGGGGGTGGCGTTTTTGTGTTGATTACCGGAAGTTGAATCAAGCTACAATCTCAGATAAATTTCCTATCCCGGTGATTGAAGAACTATTAGATGAGTTATATGGAGCAGCAGTTTTCTCTAAACTGGACCTCAAATCAGGTTACCACCAAATTAGAATGAAGGAAGAAGATATAGAGAAGACAGCGTTTCGCACCCATGAAGGCCATTATGAATTCCTAGTGATGCCTTTCGGTCTCACCAACGCACCAGCAACGTTTCAATCACTGATGAATCAGGTTTTCAAGCCCTTCCTTAGACGCTGTGTTTTGGTATTTTTTGATGATATCTTAGTATATAGCAGGGACATCACTGAACATGAGAAACACCTAGGGATGGTTTTTGCTGTGTTAAGGGATAATCAACTCTATGCCAATCACAAGAAATGTGTGTTTGCTCATTCTAAAATCCAATATTTGGGACACCAAATATCTAAGGCAGGGGTAGAGGCAGATGAAGATAAAATTAGAAGTATGGTAAATTGGCCAAGACCTTCAGATGTGACCGAATTAAGAGGATTTCTGGGGCTGACTGGATATTACCGAAGGTTTGTTAAGGGTTACAGCAACATTGCAACCCCCTTACTAAACTATTACAGAAAAATGCTTTTAAATGGAATGAAGACGCTGAAACAGCATTCGTCAGGCTGA

Coding sequence (CDS)

ATGGAAGTAGAAACTGATGATACTTACAAGACTGATGAGAAAGAGGAAGGAGATGAAGCGAATATCCCTATGATTCGGTTCTTACTACAACAGTACATAGATATTTTTACCACACCAAAGGGACTCCCTCCAAAGAGAGATATCGACCACAGGATATTGACACTACCCGACCAAAAGCCGATCAATGTAAGACCATATAAATATGGACATATCCAAAAAGGGGAGATAGAGAAGTTAGTAGCTGAAATGCTGCAAGATGGTGTCATCCGCCCAAGCCGAAGCCCATATTCCAGCCCTGTTCTCCTGGTTAAGAAGAAAGATGGGGGGTGGCGTTTTTGTGTTGATTACCGGAAGTTGAATCAAGCTACAATCTCAGATAAATTTCCTATCCCGGTGATTGAAGAACTATTAGATGAGTTATATGGAGCAGCAGTTTTCTCTAAACTGGACCTCAAATCAGGTTACCACCAAATTAGAATGAAGGAAGAAGATATAGAGAAGACAGCGTTTCGCACCCATGAAGGCCATTATGAATTCCTAGTGATGCCTTTCGGTCTCACCAACGCACCAGCAACGTTTCAATCACTGATGAATCAGGTTTTCAAGCCCTTCCTTAGACGCTGTGTTTTGGTATTTTTTGATGATATCTTAGTATATAGCAGGGACATCACTGAACATGAGAAACACCTAGGGATGGTTTTTGCTGTGTTAAGGGATAATCAACTCTATGCCAATCACAAGAAATGTGTGTTTGCTCATTCTAAAATCCAATATTTGGGACACCAAATATCTAAGGCAGGGGTAGAGGCAGATGAAGATAAAATTAGAAGTATGGTAAATTGGCCAAGACCTTCAGATGTGACCGAATTAAGAGGATTTCTGGGGCTGACTGGATATTACCGAAGGTTTGTTAAGGGTTACAGCAACATTGCAACCCCCTTACTAAACTATTACAGAAAAATGCTTTTAAATGGAATGAAGACGCTGAAACAGCATTCGTCAGGCTGA

Protein sequence

MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKPINVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYYRRFVKGYSNIATPLLNYYRKMLLNGMKTLKQHSSG
Homology
[Close]
BLAST of Cmc07g0190341 vs. NCBI nr
Match: KAA0061073.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 638.3 bits (1645), Expect = 3.8e-179
Identity = 310/320 (96.88%), Postives = 313/320 (97.81%), Query Frame = 0 

Query: 1   MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKP 60
           MEVETDDTYKTDEKEEGDEA+IPMIRFLLQQY DIFTTPKGLPPKRDIDHRILTLPDQKP
Sbjct: 538 MEVETDDTYKTDEKEEGDEADIPMIRFLLQQYKDIFTTPKGLPPKRDIDHRILTLPDQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 657

Query: 121 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 180
           QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEED+EKTAFRTHEGHYEFL
Sbjct: 658 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDVEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDI E EKHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDIIEREKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 300
           QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY
Sbjct: 778 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 837

Query: 301 RRFVKGYSNIATPLLNYYRK 321
           RRFVKGYSNIATPL    +K
Sbjct: 838 RRFVKGYSNIATPLTKLLQK 857

[Close]
BLAST of Cmc07g0190341 vs. NCBI nr
Match: KAA0055376.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 632.5 bits (1630), Expect = 2.1e-177
Identity = 308/320 (96.25%), Postives = 312/320 (97.50%), Query Frame = 0 

Query: 1   MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKP 60
           M+VETDDTYKTDEKEEGDEA+IPMIRFLLQQY DIFTTPKGLPPKRDIDHRILTLPDQKP
Sbjct: 538 MKVETDDTYKTDEKEEGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPDQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKK+GGWRFCVDYRKLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKNGGWRFCVDYRKLN 657

Query: 121 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 180
           QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL
Sbjct: 658 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFF DILVYSRDITEHEKHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFYDILVYSRDITEHEKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 300
           QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRP DVTELRGFL LTGYY
Sbjct: 778 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPLDVTELRGFLRLTGYY 837

Query: 301 RRFVKGYSNIATPLLNYYRK 321
           RRFVKGYSNIATPL    +K
Sbjct: 838 RRFVKGYSNIATPLTKLLQK 857

[Close]
BLAST of Cmc07g0190341 vs. NCBI nr
Match: TYJ99303.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 632.5 bits (1630), Expect = 2.1e-177
Identity = 308/320 (96.25%), Postives = 312/320 (97.50%), Query Frame = 0 

Query: 1   MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKP 60
           M+VETDDTYKTDEKEEGDEA+IPMIRFLLQQY DIFTTPKGLPPKRDIDHRILTLPDQKP
Sbjct: 538 MKVETDDTYKTDEKEEGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPDQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKK+GGWRFCVDYRKLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKNGGWRFCVDYRKLN 657

Query: 121 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 180
           QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL
Sbjct: 658 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFF DILVYSRDITEHEKHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFYDILVYSRDITEHEKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 300
           QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRP DVTELRGFL LTGYY
Sbjct: 778 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPLDVTELRGFLRLTGYY 837

Query: 301 RRFVKGYSNIATPLLNYYRK 321
           RRFVKGYSNIATPL    +K
Sbjct: 838 RRFVKGYSNIATPLTKLLQK 857

[Close]
BLAST of Cmc07g0190341 vs. NCBI nr
Match: KAA0039128.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK26985.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 622.9 bits (1605), Expect = 1.7e-174
Identity = 300/320 (93.75%), Postives = 310/320 (96.88%), Query Frame = 0 

Query: 1   MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKP 60
           MEVET+DTYKTDEKE+GDEA+IPMIRFLLQQY DIFTTPK LPPKRDIDHRILTLP+QKP
Sbjct: 538 MEVETEDTYKTDEKEKGDEADIPMIRFLLQQYTDIFTTPKDLPPKRDIDHRILTLPNQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDG+IRPSRSPYSSPVLLVKKKDGGWRFCVDY KLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYSSPVLLVKKKDGGWRFCVDYWKLN 657

Query: 121 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 180
           QAT+SDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL
Sbjct: 658 QATVSDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDIL YS DITEH+KHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILAYSSDITEHKKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 300
            LYANHKKCVFAHS+IQYLGHQISKAGVEADEDKIRSMV+WPRPSDVTELRGFLGLTGYY
Sbjct: 778 HLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMVDWPRPSDVTELRGFLGLTGYY 837

Query: 301 RRFVKGYSNIATPLLNYYRK 321
           RRFVKGYSNIATPL    +K
Sbjct: 838 RRFVKGYSNIATPLTKLLQK 857

[Close]
BLAST of Cmc07g0190341 vs. NCBI nr
Match: TYK14624.1 (uncharacterized protein E5676_scaffold1275G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 617.1 bits (1590), Expect = 9.1e-173
Identity = 294/320 (91.88%), Postives = 309/320 (96.56%), Query Frame = 0 

Query: 1   MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKP 60
           MEVE ++ YKTD+KE+GDEA+IPMIRFLLQQY DIFTTPKGLPPKRDIDHRILTLP+Q+P
Sbjct: 293 MEVEVEEIYKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQRP 352

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 120
           INVRPYKYGH+QKGEIE LVAEMLQDG+IRPSRSPYSS VLLVKKKDGGWRFCVDYRKLN
Sbjct: 353 INVRPYKYGHVQKGEIENLVAEMLQDGIIRPSRSPYSSLVLLVKKKDGGWRFCVDYRKLN 412

Query: 121 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 180
           QAT+SDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL
Sbjct: 413 QATVSDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 472

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYS D+TEHEKHLGM+FAVLRDN
Sbjct: 473 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDLTEHEKHLGMIFAVLRDN 532

Query: 241 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 300
           QLYANHKKCVFAHS+IQYLGHQISKAGVEAD+DKIRSMVNWPRPSDVTELRGFLGLTGYY
Sbjct: 533 QLYANHKKCVFAHSRIQYLGHQISKAGVEADDDKIRSMVNWPRPSDVTELRGFLGLTGYY 592

Query: 301 RRFVKGYSNIATPLLNYYRK 321
           RRFVKGYSNI TPL    +K
Sbjct: 593 RRFVKGYSNIVTPLTKLLQK 612

[Close]
BLAST of Cmc07g0190341 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 7.2e-64
Identity = 126/307 (41.04%), Postives = 187/307 (60.91%), Query Frame = 0 

Query: 24  MIRFLLQQYIDIFTTP-KGLPPKRDIDHRILTLPDQKPINVRPYKYGHIQKGEIEKLVAE 83
           ++  LL ++  IF  P  G+  +  +   I T   Q PI  + Y Y    +GE+E+ + E
Sbjct: 87  ILNSLLGEFPRIFEPPLSGMSVETAVKAEIRT-NTQDPIYAKSYPYPVNMRGEVERQIDE 146

Query: 84  MLQDGVIRPSRSPYSSPVLLVKKK-----DGGWRFCVDYRKLNQATISDKFPIPVIEELL 143
           +LQDG+IRPS SPY+SP+ +V KK     +  +R  VD+++LN  TI D +PIP I   L
Sbjct: 147 LLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATL 206

Query: 144 DELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLM 203
             L  A  F+ LDL SG+HQI MKE DI KTAF T  G YEFL +PFGL NAPA FQ ++
Sbjct: 207 ASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMI 266

Query: 204 NQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSKIQ 263
           + + +  + +   V+ DDI+V+S D   H K+L +V A L    L  N +K  F  ++++
Sbjct: 267 DDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVE 326

Query: 264 YLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYYRRFVKGYSNIATPLLNY 323
           +LG+ ++  G++AD  K+R++   P P+ V EL+ FLG+T YYR+F++ Y+ +A PL N 
Sbjct: 327 FLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNL 386

Query: 324 YRKMLLN 325
            R +  N
Sbjct: 387 TRGLYAN 392

[Close]
BLAST of Cmc07g0190341 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.6e-63
Identity = 117/274 (42.70%), Postives = 169/274 (61.68%), Query Frame = 0 

Query: 52  ILTLPDQKPINVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGG-- 111
           +L      PI  + Y      + E+E  V EML  G+IR S SPY+SP  +V KK     
Sbjct: 198 VLNTTHNSPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASG 257

Query: 112 ---WRFCVDYRKLNQATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIE 171
              +R  +DYRKLN+ TI D++PIP ++E+L +L     F+ +DL  G+HQI M EE I 
Sbjct: 258 ANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESIS 317

Query: 172 KTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEH 231
           KTAF T  GHYE+L MPFGL NAPATFQ  MN + +P L +  LV+ DDI+++S  +TEH
Sbjct: 318 KTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEH 377

Query: 232 EKHLGMVFAVLRDNQLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSD 291
              + +VF  L D  L     KC F   +  +LGH ++  G++ +  K++++V++P P+ 
Sbjct: 378 LNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTK 437

Query: 292 VTELRGFLGLTGYYRRFVKGYSNIATPLLNYYRK 321
             E+R FLGLTGYYR+F+  Y++IA P+ +  +K
Sbjct: 438 DKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKK 471

[Close]
BLAST of Cmc07g0190341 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 2.2e-60
Identity = 109/260 (41.92%), Postives = 161/260 (61.92%), Query Frame = 0 

Query: 66  YKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGG-----WRFCVDYRKLN 125
           Y Y    + E+E  + +ML  G+IR S SPY+SP+ +V KK        +R  +DYRKLN
Sbjct: 213 YSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLN 272

Query: 126 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 185
           + T+ D+ PIP ++E+L +L     F+ +DL  G+HQI M  E + KTAF T  GHYE+L
Sbjct: 273 EITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYL 332

Query: 186 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 245
            MPFGL NAPATFQ  MN + +P L +  LV+ DDI+V+S  + EH + LG+VF  L   
Sbjct: 333 RMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKA 392

Query: 246 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 305
            L     KC F   +  +LGH ++  G++ + +KI ++  +P P+   E++ FLGLTGYY
Sbjct: 393 NLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYY 452

Query: 306 RRFVKGYSNIATPLLNYYRK 321
           R+F+  +++IA P+    +K
Sbjct: 453 RKFIPNFADIAKPMTKCLKK 472

[Close]
BLAST of Cmc07g0190341 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 230.7 bits (587), Expect = 2.4e-59
Identity = 128/318 (40.25%), Postives = 182/318 (57.23%), Query Frame = 0 

Query: 3   VETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKR------DIDHRILTLP 62
           +++ +   TD   +     +P+  +L Q+Y +I      LPP+        + H I   P
Sbjct: 537 IQSVEPNATDHSNKDTFCTLPV--WLQQKYREIIR--NDLPPRPADINNIPVKHDIEIKP 596

Query: 63  DQKPINVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDY 122
             +   ++PY      + EI K+V ++L +  I PS+SP SSPV+LV KKDG +R CVDY
Sbjct: 597 GARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDY 656

Query: 123 RKLNQATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGH 182
           R LN+ATISD FP+P I+ LL  +  A +F+ LDL SGYHQI M+ +D  KTAF T  G 
Sbjct: 657 RTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGK 716

Query: 183 YEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAV 242
           YE+ VMPFGL NAP+TF   M   F+    R V V+ DDIL++S    EH KHL  V   
Sbjct: 717 YEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLER 776

Query: 243 LRDNQLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGL 302
           L++  L    KKC FA  + ++LG+ I    +   + K  ++ ++P P  V + + FLG+
Sbjct: 777 LKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGM 836

Query: 303 TGYYRRFVKGYSNIATPL 315
             YYRRF+   S IA P+
Sbjct: 837 INYYRRFIPNCSKIAQPI 848

[Close]
BLAST of Cmc07g0190341 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 230.7 bits (587), Expect = 2.4e-59
Identity = 128/318 (40.25%), Postives = 182/318 (57.23%), Query Frame = 0 

Query: 3   VETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKR------DIDHRILTLP 62
           +++ +   TD   +     +P+  +L Q+Y +I      LPP+        + H I   P
Sbjct: 563 IQSVEPNATDHSNKDTFCTLPV--WLQQKYREIIR--NDLPPRPADINNIPVKHDIEIKP 622

Query: 63  DQKPINVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDY 122
             +   ++PY      + EI K+V ++L +  I PS+SP SSPV+LV KKDG +R CVDY
Sbjct: 623 GARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDY 682

Query: 123 RKLNQATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGH 182
           R LN+ATISD FP+P I+ LL  +  A +F+ LDL SGYHQI M+ +D  KTAF T  G 
Sbjct: 683 RTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGK 742

Query: 183 YEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAV 242
           YE+ VMPFGL NAP+TF   M   F+    R V V+ DDIL++S    EH KHL  V   
Sbjct: 743 YEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLER 802

Query: 243 LRDNQLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGL 302
           L++  L    KKC FA  + ++LG+ I    +   + K  ++ ++P P  V + + FLG+
Sbjct: 803 LKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGM 862

Query: 303 TGYYRRFVKGYSNIATPL 315
             YYRRF+   S IA P+
Sbjct: 863 INYYRRFIPNCSKIAQPI 874

[Close]
BLAST of Cmc07g0190341 vs. ExPASy TrEMBL
Match: A0A5A7UYM1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G002110 PE=4 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 1.8e-179
Identity = 310/320 (96.88%), Postives = 313/320 (97.81%), Query Frame = 0 

Query: 1   MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKP 60
           MEVETDDTYKTDEKEEGDEA+IPMIRFLLQQY DIFTTPKGLPPKRDIDHRILTLPDQKP
Sbjct: 538 MEVETDDTYKTDEKEEGDEADIPMIRFLLQQYKDIFTTPKGLPPKRDIDHRILTLPDQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 657

Query: 121 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 180
           QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEED+EKTAFRTHEGHYEFL
Sbjct: 658 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDVEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDI E EKHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDIIEREKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 300
           QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY
Sbjct: 778 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 837

Query: 301 RRFVKGYSNIATPLLNYYRK 321
           RRFVKGYSNIATPL    +K
Sbjct: 838 RRFVKGYSNIATPLTKLLQK 857

[Close]
BLAST of Cmc07g0190341 vs. ExPASy TrEMBL
Match: A0A5A7UM77 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002210 PE=4 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 1.0e-177
Identity = 308/320 (96.25%), Postives = 312/320 (97.50%), Query Frame = 0 

Query: 1   MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKP 60
           M+VETDDTYKTDEKEEGDEA+IPMIRFLLQQY DIFTTPKGLPPKRDIDHRILTLPDQKP
Sbjct: 538 MKVETDDTYKTDEKEEGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPDQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKK+GGWRFCVDYRKLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKNGGWRFCVDYRKLN 657

Query: 121 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 180
           QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL
Sbjct: 658 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFF DILVYSRDITEHEKHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFYDILVYSRDITEHEKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 300
           QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRP DVTELRGFL LTGYY
Sbjct: 778 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPLDVTELRGFLRLTGYY 837

Query: 301 RRFVKGYSNIATPLLNYYRK 321
           RRFVKGYSNIATPL    +K
Sbjct: 838 RRFVKGYSNIATPLTKLLQK 857

[Close]
BLAST of Cmc07g0190341 vs. ExPASy TrEMBL
Match: A0A5D3BJ50 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005160 PE=4 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 1.0e-177
Identity = 308/320 (96.25%), Postives = 312/320 (97.50%), Query Frame = 0 

Query: 1   MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKP 60
           M+VETDDTYKTDEKEEGDEA+IPMIRFLLQQY DIFTTPKGLPPKRDIDHRILTLPDQKP
Sbjct: 538 MKVETDDTYKTDEKEEGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPDQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKK+GGWRFCVDYRKLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKNGGWRFCVDYRKLN 657

Query: 121 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 180
           QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL
Sbjct: 658 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFF DILVYSRDITEHEKHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFYDILVYSRDITEHEKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 300
           QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRP DVTELRGFL LTGYY
Sbjct: 778 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPLDVTELRGFLRLTGYY 837

Query: 301 RRFVKGYSNIATPLLNYYRK 321
           RRFVKGYSNIATPL    +K
Sbjct: 838 RRFVKGYSNIATPLTKLLQK 857

[Close]
BLAST of Cmc07g0190341 vs. ExPASy TrEMBL
Match: A0A5A7T8C0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold322G00570 PE=4 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 8.0e-175
Identity = 300/320 (93.75%), Postives = 310/320 (96.88%), Query Frame = 0 

Query: 1   MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKP 60
           MEVET+DTYKTDEKE+GDEA+IPMIRFLLQQY DIFTTPK LPPKRDIDHRILTLP+QKP
Sbjct: 538 MEVETEDTYKTDEKEKGDEADIPMIRFLLQQYTDIFTTPKDLPPKRDIDHRILTLPNQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDG+IRPSRSPYSSPVLLVKKKDGGWRFCVDY KLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYSSPVLLVKKKDGGWRFCVDYWKLN 657

Query: 121 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 180
           QAT+SDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL
Sbjct: 658 QATVSDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDIL YS DITEH+KHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILAYSSDITEHKKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 300
            LYANHKKCVFAHS+IQYLGHQISKAGVEADEDKIRSMV+WPRPSDVTELRGFLGLTGYY
Sbjct: 778 HLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMVDWPRPSDVTELRGFLGLTGYY 837

Query: 301 RRFVKGYSNIATPLLNYYRK 321
           RRFVKGYSNIATPL    +K
Sbjct: 838 RRFVKGYSNIATPLTKLLQK 857

[Close]
BLAST of Cmc07g0190341 vs. ExPASy TrEMBL
Match: A0A5D3E0Q7 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00130 PE=4 SV=1)

HSP 1 Score: 617.1 bits (1590), Expect = 4.4e-173
Identity = 294/320 (91.88%), Postives = 310/320 (96.88%), Query Frame = 0 

Query: 1   MEVETDDTYKTDEKEEGDEANIPMIRFLLQQYIDIFTTPKGLPPKRDIDHRILTLPDQKP 60
           MEVE ++ YKTD+KE+GDEA+IPMIRFLLQQY DIFTTPKGLPPKRDIDHRILTLP+Q+P
Sbjct: 293 MEVEVEEIYKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQRP 352

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 120
           INVRPYKYGH+QKGEIE LVAEMLQDG+IRPSRSPYSS VLLVKKKDGGWRFCVDYRKLN
Sbjct: 353 INVRPYKYGHVQKGEIENLVAEMLQDGIIRPSRSPYSSLVLLVKKKDGGWRFCVDYRKLN 412

Query: 121 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 180
           QAT+SDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL
Sbjct: 413 QATVSDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 472

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDITEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYS D+TEHEKHLGM+FAVLRDN
Sbjct: 473 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDLTEHEKHLGMIFAVLRDN 532

Query: 241 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 300
           QLYANHKKCVFAHS+IQYLGHQISKAGVEAD+DKIRSMVNWPRPSDVTELRGFLGLTGYY
Sbjct: 533 QLYANHKKCVFAHSRIQYLGHQISKAGVEADDDKIRSMVNWPRPSDVTELRGFLGLTGYY 592

Query: 301 RRFVKGYSNIATPLLNYYRK 321
           R+FVKGYSNIATPL    +K
Sbjct: 593 RQFVKGYSNIATPLTKLLQK 612

[Close]
BLAST of Cmc07g0190341 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-24
Identity = 53/94 (56.38%), Postives = 61/94 (64.89%), Query Frame = 0 

Query: 229 HLGMVFAVLRDNQLYANHKKCVFAHSKIQYLGHQ--ISKAGVEADEDKIRSMVNWPRPSD 288
           HLGMV  +   +Q YAN KKC F   +I YLGH+  IS  GV AD  K+ +MV WP P +
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 289 VTELRGFLGLTGYYRRFVKGYSNIATPLLNYYRK 321
            TELRGFLGLTGYYRRFVK Y  I  PL    +K
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKK 96

[Close]
BLAST of Cmc07g0190341 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 4.9e-07
Identity = 22/40 (55.00%), Postives = 32/40 (80.00%), Query Frame = 0 

Query: 71  IQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGW 111
           +++  ++  + EML+  +I+PS SPYSSPVLLV+KKDGGW
Sbjct: 40  LRRTRLKNWLGEMLEARIIQPSISPYSSPVLLVQKKDGGW 79

The following BLAST results are available for this feature:
BLAST of Cmc07g0190341 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0061073.13.8e-17996.88Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0055376.12.1e-17796.25Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
TYJ99303.12.1e-17796.25Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0039128.11.7e-17493.75Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK26985.1 Ty3/gyp... [more]
TYK14624.19.1e-17391.88uncharacterized protein E5676_scaffold1275G00160 [Cucumis melo var. makuwa][more]
BLAST of Cmc07g0190341 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8I7P97.2e-6441.04Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... [more]
P208251.6e-6342.70Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... [more]
P043232.2e-6041.92Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... [more]
Q993152.4e-5940.25Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Q7LHG52.4e-5940.25Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
BLAST of Cmc07g0190341 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UYM11.8e-17996.88Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7UM771.0e-17796.25Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3BJ501.0e-17796.25Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7T8C08.0e-17593.75Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3E0Q74.4e-17391.88Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
BLAST of Cmc07g0190341 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00860.11.2e-2456.38DNA/RNA polymerases superfamily protein [more]
ATMG00850.14.9e-0755.00DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 103..263
e-value: 1.8E-32
score: 112.7
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 84..263
score: 16.19376
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 48..188
e-value: 9.1E-91
score: 304.9
NoneNo IPR availablePANTHERPTHR24559:SF319SUBFAMILY NOT NAMEDcoord: 7..214
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 7..214
NoneNo IPR availableCDDcd01647RT_LTRcoord: 87..261
e-value: 1.26588E-98
score: 286.799
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 272..333
e-value: 3.6E-14
score: 54.5
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 128..263
e-value: 9.1E-91
score: 304.9
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 29..320

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc07g0190341.1Cmc07g0190341.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding