Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGTCAAACAAAGGGAACCTAATTAGATTAGATTAAAGATTAGGCCAATAAATTAAAGCAAAAGAAAAAAAAAAAAGAGTGTATTTAATAAGCTTTTCTCCTAAGAACTTAGTTAGGAATGAATCCTTTGGAAACATCCATGGCTGCCTGAGAGAAAATTTAGAAAGATCAAGAAACCCCAAAAACTTTGAAAAACGAAAGGAAGAAACAAAGTTAGGATTCTCCCCCACCTGTTTCACCAAGCAGAAACCTCCATGGCTGCCTAAACACAAAGACAAAGAAGAAAAATAGAAGCCAAAAATGAAGCAATCTTTGTTATTTTCTGAGAATCTAACACCCCCCAAGGTAACATTTCTTGATAAACTTATTTTTCAGGGTTTGAAAATGCATGTTTTATGCTACAATATGTATATACATATATATATATATATATATGGAATATATACAGTAATGTTTTTTCTTTTAAATTTTTGTTATATAGTTTGAAGTGATTATTATAAATGCAAATATGAGTTGCAATGGATGTCGCCAAAGAGTTTCTCAAATTGTCTCTAAAATGTCAGGTTAGTTCATTTCGTCATTTTTATTTATTCGTCTTCTTCGCTTCTTTTCCATCCCTAAAAATTCAATAGTTACAATTACGTTCCCAAACTTTCTATATAACTTTGAATCCTAGAACTTTCTCGAGTTTTAAAATTTGGTATTGAAAAATTATAAGAATTGGAACTCTAAAGTAGTTACAATTTCTTTAAAAATGTAAGTTTAACTTATAAATTCGAGGTCCGATTTTCTACGCTATAAAAAAAATTGAGGGTACAATTGCAATCATCCATCGTACTTTAGAATTTAGATTTGCAATTTACCTTAATTTAAATATAATTTCCCTTTCTAACAAGATCTGAGATCTAATTAAATAATTGAGGCCATATGCTTTTTTTTTTATTTAAAAAAGTATAATCATCATTCGTCATATACTCAGTTTATATGTATAATTAAAAGCATAATTTTAATGTACTACGATATTTTTGGCACATAGATTTGTTTAGTCGTCTTTTGTTATGATTTGATTTTAATAAAAAAAAATATAAATGAGGTGAAAGATTCAAATTTCAAGCCCTCCGATCAAGAGGGTATTTTAATTCCGTATTAACCTTATATTAGTGATTTAATCGCTTCATATGTGGTATACTAATTCAATTAGATTTTGTATTATTGATAGTTGTACTTATGATTAAACATAGAAACATTTTCAAATACATTAAAATATTTACAAAATATAATAAATATTTCAATGAACTACAATAGATCGTTCTAAATTACTATCGTAATAAAAATGCACAAATAGTAGACCATAATACTTTACTATATTATTTAAAATAATTTTCCATAAAAACATAGACTTAATTGAAATATTTTATAAAGTTTAAAATTAAAATTAAAACTTATGGACTTAATTGAAATATTGTATAAAATTTAAAATTACACGAAAACATGAAAGAAATCGAGCCTTTTAACTCTTTATTTAATAAGACCCGTGCTACGCTTTGTTATATAATATTCTTAATTAGAACTATATCACATATAATATGTATAACTTTACCTTATTCTATAGCCATTTTTAATTAGAACTTACAGTCCTTTCCAATCAGAACTTTCACATATGTTCTTTCGAAAAGATAAAGTTGATACATACATTTCATATGTGTATGACTACATAACATATAATTGACGTTACTTTAATATATCCATATGAAATATACAATTAAGAAATATAATTAAACATATCGATATAAAATATACAACTAAGAAATATAATTGGGAGTTGAGAAATTTGAAATTTCTATCCTAACTATTGTATTTACCCTATAAGCTTAATGTCTAAACTTAATTTTGAGACTAAAGTCATTTCCTTTGTAGAATGAAAAGGTTACAAAATCTCGAAAATGATATGATCTATGGTTAGATGATGACATGGATGACTAAGAGTAGAGGCTTGGTGATTCTTTAAGAATTATTGAGATAATAGACAATATCTCAAATCAAGGCTTGAGCTATTCATGATAGGTTTATAAAAAATGAACATAATCTAGACAAAAAGTGACACACCTCTATGGTAAATAAACAATATCTTTCCACTTTTACTTTTACATATCAGTTATTTTCTCTTTTAAACTATATAATATATATATATCAAGACTGTCTAAACAATCTATTTTTTTTGTTAATATGCAGAATTAGTGGAGTTGACTATAGATGTGACAAAAAAACAAGTGATAGTTAAAGGAAATGTCAAATGCCAAAGCAAGAATCAAGAAAATACTATTCATTCCCAAATGAAGAAGTGTGATTCTTTAATAACCATCTCCCCCCATTTTTCAAATAATTGCTTTTAAATTCATTCTTTTCTAGTAACCAACATATCTATATACAATTTTTGTTTATGCATTTATTTGTAAGTCTAATTTGAACCACAAGCTTATGTTCTTCACTTAATTAGAATGATCAATCGACCTTGTAAAATTTCCAAGTCAAATAATTTTACAACTTACCTCCCATAAGCTTTATT
mRNA sequence
TAGTCAAACAAAGGGAACCTAATTAGATTAGATTAAAGATTAGGCCAATAAATTAAAGCAAAAGAAAAAAAAAAAAGAGTGTATTTAATAAGCTTTTCTCCTAAGAACTTAGTTAGGAATGAATCCTTTGGAAACATCCATGGCTGCCTGAGAGAAAATTTAGAAAGATCAAGAAACCCCAAAAACTTTGAAAAACGAAAGGAAGAAACAAAGTTAGGATTCTCCCCCACCTGTTTCACCAAGCAGAAACCTCCATGGCTGCCTAAACACAAAGACAAAGAAGAAAAATAGAAGCCAAAAATGAAGCAATCTTTGTTATTTTCTGAGAATCTAACACCCCCCAAGTTTGAAGTGATTATTATAAATGCAAATATGAGTTGCAATGGATGTCGCCAAAGAGTTTCTCAAATTGTCTCTAAAATGTCAGAATTAGTGGAGTTGACTATAGATGTGACAAAAAAACAAGTGATAGTTAAAGGAAATGTCAAATGCCAAAGCAAGAATCAAGAAAATACTATTCATTCCCAAATGAAGAAGTGTGATTCTTTAATAACCATCTCCCCCCATTTTTCAAATAATTGCTTTTAAATTCATTCTTTTCTAGTAACCAACATATCTATATACAATTTTTGTTTATGCATTTATTTGTAAGTCTAATTTGAACCACAAGCTTATGTTCTTCACTTAATTAGAATGATCAATCGACCTTGTAAAATTTCCAAGTCAAATAATTTTACAACTTACCTCCCATAAGCTTTATT
Coding sequence (CDS)
ATGAAGCAATCTTTGTTATTTTCTGAGAATCTAACACCCCCCAAGTTTGAAGTGATTATTATAAATGCAAATATGAGTTGCAATGGATGTCGCCAAAGAGTTTCTCAAATTGTCTCTAAAATGTCAGAATTAGTGGAGTTGACTATAGATGTGACAAAAAAACAAGTGATAGTTAAAGGAAATGTCAAATGCCAAAGCAAGAATCAAGAAAATACTATTCATTCCCAAATGAAGAAGTGTGATTCTTTAATAACCATCTCCCCCCATTTTTCAAATAATTGCTTTTAA
Protein sequence
MKQSLLFSENLTPPKFEVIIINANMSCNGCRQRVSQIVSKMSELVELTIDVTKKQVIVKGNVKCQSKNQENTIHSQMKKCDSLITISPHFSNNCF
Homology
BLAST of Cmc06g0177081 vs. NCBI nr
Match:
KGN55871.1 (hypothetical protein Csa_010412 [Cucumis sativus])
HSP 1 Score: 175.3 bits (443), Expect = 2.6e-40
Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 0
Query: 1 MKQSLLFSENLTPPKFEVIIINANMSCNGCRQRVSQIVSKMSELVELTIDVTKKQVIVKG 60
MKQSLLFSENLTPPKFEVI+INANMSCNGCRQRVSQIVSKMSEL ELTIDVTKKQVIVKG
Sbjct: 2 MKQSLLFSENLTPPKFEVIVINANMSCNGCRQRVSQIVSKMSELAELTIDVTKKQVIVKG 61
Query: 61 NVKCQSKNQENTIHSQMKKCDSLITISPHFSNNCF 96
NVKCQSKNQENTIHSQM CDSL + SPHFSN+CF
Sbjct: 62 NVKCQSKNQENTIHSQMNNCDSLKSPSPHFSNSCF 96
BLAST of Cmc06g0177081 vs. NCBI nr
Match:
XP_038903445.1 (copper transport protein ATX1 [Benincasa hispida])
HSP 1 Score: 148.7 bits (374), Expect = 2.6e-32
Identity = 76/95 (80.00%), Postives = 83/95 (87.37%), Query Frame = 0
Query: 1 MKQSLLFSENLTPPKFEVIIINANMSCNGCRQRVSQIVSKMSELVELTIDVTKKQVIVKG 60
M+QSLLFSENLTPP F+VI+INANMSC GCRQRVSQIV KMSELVE TIDVTK+QVIVKG
Sbjct: 1 MEQSLLFSENLTPPSFQVIVINANMSCKGCRQRVSQIVCKMSELVEFTIDVTKRQVIVKG 60
Query: 61 NVKCQSKNQENTIHSQMKKCDSLITISPHFSNNCF 96
NVKCQSKN+ENT MKKC+SL + SP FSN CF
Sbjct: 61 NVKCQSKNEENT----MKKCNSLKSPSPQFSNKCF 91
BLAST of Cmc06g0177081 vs. NCBI nr
Match:
XP_023553457.1 (uncharacterized protein LOC111810871 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 129.8 bits (325), Expect = 1.2e-26
Identity = 68/98 (69.39%), Postives = 82/98 (83.67%), Query Frame = 0
Query: 1 MKQSLLFSENLTPPKFEVIIINANMSCNGCRQRVSQIVSKMSELVELTIDVTKKQVIVKG 60
M+QSLLFSE+LTPP F+VI+INANMSCNGCRQRVSQ++SK+SELVE TIDVTKKQV+VKG
Sbjct: 1 MEQSLLFSEDLTPPSFQVIVINANMSCNGCRQRVSQLLSKISELVEFTIDVTKKQVVVKG 60
Query: 61 NVKCQSK-NQENTIHSQMKKCDSL--ITISPHFSNNCF 96
NVK Q K ++EN +HSQ SL +++ FSNNCF
Sbjct: 61 NVKFQGKIHEENGVHSQTYNSKSLKSQSLTHQFSNNCF 98
BLAST of Cmc06g0177081 vs. NCBI nr
Match:
XP_022965234.1 (uncharacterized protein LOC111465148 isoform X1 [Cucurbita maxima])
HSP 1 Score: 128.3 bits (321), Expect = 3.6e-26
Identity = 67/98 (68.37%), Postives = 84/98 (85.71%), Query Frame = 0
Query: 1 MKQSLLFSENLTPPKFEVIIINANMSCNGCRQRVSQIVSKMSELVELTIDVTKKQVIVKG 60
M+QSLLFSE+LTPP F+VI+INANMSCNGCRQRVSQ++SK+SELVE TIDVTKKQV+VKG
Sbjct: 1 MEQSLLFSEDLTPPSFQVIVINANMSCNGCRQRVSQLLSKISELVEFTIDVTKKQVVVKG 60
Query: 61 NVKCQSK-NQENTIHSQMKKCDSL--ITISPHFSNNCF 96
NVK Q K ++E++IHSQ +SL ++S +SN+CF
Sbjct: 61 NVKFQGKIHEEDSIHSQTYNSNSLKSQSLSHQYSNDCF 98
BLAST of Cmc06g0177081 vs. NCBI nr
Match:
XP_022154033.1 (uncharacterized protein LOC111021388 isoform X1 [Momordica charantia])
HSP 1 Score: 127.5 bits (319), Expect = 6.2e-26
Identity = 64/95 (67.37%), Postives = 76/95 (80.00%), Query Frame = 0
Query: 1 MKQSLLFSENLTPPKFEVIIINANMSCNGCRQRVSQIVSKMSELVELTIDVTKKQVIVKG 60
MKQSLLF ENLTPP F+VI+INANM CN CRQRVSQ++SKMSEL+E+TIDVTK QV+VKG
Sbjct: 1 MKQSLLFYENLTPPLFQVIVINANMGCNRCRQRVSQLLSKMSELIEVTIDVTKNQVVVKG 60
Query: 61 NVKCQSKNQENTIHSQMKKCDSLITISPHFSNNCF 96
N+K QSK +E +H K SL +IS SN+CF
Sbjct: 61 NIKFQSKKEEINVHYSQVKGGSLKSISLELSNHCF 95
BLAST of Cmc06g0177081 vs. ExPASy TrEMBL
Match:
A0A0A0L6W5 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G020590 PE=4 SV=1)
HSP 1 Score: 175.3 bits (443), Expect = 1.3e-40
Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 0
Query: 1 MKQSLLFSENLTPPKFEVIIINANMSCNGCRQRVSQIVSKMSELVELTIDVTKKQVIVKG 60
MKQSLLFSENLTPPKFEVI+INANMSCNGCRQRVSQIVSKMSEL ELTIDVTKKQVIVKG
Sbjct: 2 MKQSLLFSENLTPPKFEVIVINANMSCNGCRQRVSQIVSKMSELAELTIDVTKKQVIVKG 61
Query: 61 NVKCQSKNQENTIHSQMKKCDSLITISPHFSNNCF 96
NVKCQSKNQENTIHSQM CDSL + SPHFSN+CF
Sbjct: 62 NVKCQSKNQENTIHSQMNNCDSLKSPSPHFSNSCF 96
BLAST of Cmc06g0177081 vs. ExPASy TrEMBL
Match:
A0A6J1HQF9 (uncharacterized protein LOC111465148 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465148 PE=4 SV=1)
HSP 1 Score: 128.3 bits (321), Expect = 1.8e-26
Identity = 67/98 (68.37%), Postives = 84/98 (85.71%), Query Frame = 0
Query: 1 MKQSLLFSENLTPPKFEVIIINANMSCNGCRQRVSQIVSKMSELVELTIDVTKKQVIVKG 60
M+QSLLFSE+LTPP F+VI+INANMSCNGCRQRVSQ++SK+SELVE TIDVTKKQV+VKG
Sbjct: 1 MEQSLLFSEDLTPPSFQVIVINANMSCNGCRQRVSQLLSKISELVEFTIDVTKKQVVVKG 60
Query: 61 NVKCQSK-NQENTIHSQMKKCDSL--ITISPHFSNNCF 96
NVK Q K ++E++IHSQ +SL ++S +SN+CF
Sbjct: 61 NVKFQGKIHEEDSIHSQTYNSNSLKSQSLSHQYSNDCF 98
BLAST of Cmc06g0177081 vs. ExPASy TrEMBL
Match:
A0A6J1DJ58 (uncharacterized protein LOC111021388 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021388 PE=4 SV=1)
HSP 1 Score: 127.5 bits (319), Expect = 3.0e-26
Identity = 64/95 (67.37%), Postives = 76/95 (80.00%), Query Frame = 0
Query: 1 MKQSLLFSENLTPPKFEVIIINANMSCNGCRQRVSQIVSKMSELVELTIDVTKKQVIVKG 60
MKQSLLF ENLTPP F+VI+INANM CN CRQRVSQ++SKMSEL+E+TIDVTK QV+VKG
Sbjct: 1 MKQSLLFYENLTPPLFQVIVINANMGCNRCRQRVSQLLSKMSELIEVTIDVTKNQVVVKG 60
Query: 61 NVKCQSKNQENTIHSQMKKCDSLITISPHFSNNCF 96
N+K QSK +E +H K SL +IS SN+CF
Sbjct: 61 NIKFQSKKEEINVHYSQVKGGSLKSISLELSNHCF 95
BLAST of Cmc06g0177081 vs. ExPASy TrEMBL
Match:
A0A6J1HN60 (uncharacterized protein LOC111465148 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465148 PE=4 SV=1)
HSP 1 Score: 120.2 bits (300), Expect = 4.8e-24
Identity = 66/98 (67.35%), Postives = 82/98 (83.67%), Query Frame = 0
Query: 1 MKQSLLFSENLTPPKFEVIIINANMSCNGCRQRVSQIVSKMSELVELTIDVTKKQVIVKG 60
M+QSLLFSE+LTPP VI+INANMSCNGCRQRVSQ++SK+SELVE TIDVTKKQV+VKG
Sbjct: 1 MEQSLLFSEDLTPP--SVIVINANMSCNGCRQRVSQLLSKISELVEFTIDVTKKQVVVKG 60
Query: 61 NVKCQSK-NQENTIHSQMKKCDSL--ITISPHFSNNCF 96
NVK Q K ++E++IHSQ +SL ++S +SN+CF
Sbjct: 61 NVKFQGKIHEEDSIHSQTYNSNSLKSQSLSHQYSNDCF 96
BLAST of Cmc06g0177081 vs. ExPASy TrEMBL
Match:
A0A6J1DKV3 (uncharacterized protein LOC111021388 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021388 PE=4 SV=1)
HSP 1 Score: 119.0 bits (297), Expect = 1.1e-23
Identity = 63/95 (66.32%), Postives = 74/95 (77.89%), Query Frame = 0
Query: 1 MKQSLLFSENLTPPKFEVIIINANMSCNGCRQRVSQIVSKMSELVELTIDVTKKQVIVKG 60
MKQSLLF ENLTPP VI+INANM CN CRQRVSQ++SKMSEL+E+TIDVTK QV+VKG
Sbjct: 1 MKQSLLFYENLTPPL--VIVINANMGCNRCRQRVSQLLSKMSELIEVTIDVTKNQVVVKG 60
Query: 61 NVKCQSKNQENTIHSQMKKCDSLITISPHFSNNCF 96
N+K QSK +E +H K SL +IS SN+CF
Sbjct: 61 NIKFQSKKEEINVHYSQVKGGSLKSISLELSNHCF 93
BLAST of Cmc06g0177081 vs. TAIR 10
Match:
AT2G35730.1 (Heavy metal transport/detoxification superfamily protein )
HSP 1 Score: 55.8 bits (133), Expect = 2.1e-08
Identity = 30/78 (38.46%), Postives = 50/78 (64.10%), Query Frame = 0
Query: 2 KQSLLFSENLTPPKFEVIIINANMSCNGCRQRVSQIVSKMSELVELTIDVTKKQVIVKGN 61
+++L+ E L+ P F+VI INA++ C C+ RVS+IVSKM+ + E +D+ KK V+ +G+
Sbjct: 8 RRTLMLCEKLSLPSFQVIEINADVGCVACQDRVSKIVSKMTGIEEYVVDLKKKLVMARGD 67
Query: 62 VK---CQSKNQENTIHSQ 77
+ S+ Q + SQ
Sbjct: 68 FRPRLVSSQQQVKDVVSQ 85
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN55871.1 | 2.6e-40 | 91.58 | hypothetical protein Csa_010412 [Cucumis sativus] | [more] |
| XP_038903445.1 | 2.6e-32 | 80.00 | copper transport protein ATX1 [Benincasa hispida] | [more] |
| XP_023553457.1 | 1.2e-26 | 69.39 | uncharacterized protein LOC111810871 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022965234.1 | 3.6e-26 | 68.37 | uncharacterized protein LOC111465148 isoform X1 [Cucurbita maxima] | [more] |
| XP_022154033.1 | 6.2e-26 | 67.37 | uncharacterized protein LOC111021388 isoform X1 [Momordica charantia] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L6W5 | 1.3e-40 | 91.58 | HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G020590 PE=4 SV... | [more] |
| A0A6J1HQF9 | 1.8e-26 | 68.37 | uncharacterized protein LOC111465148 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
| A0A6J1DJ58 | 3.0e-26 | 67.37 | uncharacterized protein LOC111021388 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
| A0A6J1HN60 | 4.8e-24 | 67.35 | uncharacterized protein LOC111465148 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
| A0A6J1DKV3 | 1.1e-23 | 66.32 | uncharacterized protein LOC111021388 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G35730.1 | 2.1e-08 | 38.46 | Heavy metal transport/detoxification superfamily protein | [more] |
