Cmc06g0173941 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0173941
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	ethylene-responsive transcription factor 3
Location	CMiso1.1chr06: 30853729 .. 30855004 (+)
RNA-Seq Expression	Cmc06g0173941
Synteny	Cmc06g0173941

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATACTACAGCCAGAGAAAAATACAAAAAAAATAAATAAATAAATAAAAAGAAATTATTTTAATTTAATTTTGGTGAAGAAGCTGAGAAGGTGGAGATGGTGGCTTCCAGTTTTTCCTCTTCACGGACCTCACCCTCTCTCTCTCTCTTCATCTCTCTCTCTCTCTCTCTTCCATTGATTTTCAATCTCCCATTTCTCCAACTCTCCACAATCTCTCTCCACTTTCCCATCATTTTTCCTTTCTTTTCTTTTTTTTTTTTTTTTTTTTATTAAATCCGTTATGAGGAGAGGGAGAGGGCCGCCCGTTGTACCACCCCCGCGTGAACCACCACCACCACCACCACCAGCAACCACCGGATCCGACCGGAGATATAGAGGTGTTAGAAAAAGGCCATGGGGAAGATTCGCGGCAGAGATCAGAGATCCATGGAAGAAGACCAGAGTCTGGTTAGGCACCTTCGATTCCGCAGAAGACGCCGCCCGTGCTTACGACAACGCTGCCATAACCCTCCGTGGCTCTAAAGCTAAAACCAATTTTCCCCTTCCCAATCCCACCTCCTTTTTCGATTATCCTCCTCATCCCGTCAACGCTCCAGATCCCTTCCCCGATCCCCGATTTCAGATTAGACCTACTTCCAGTAGTTTGAGTTCCACCGTTGAATCCTTCAGCGGTCCTCGCCCTCCCTCCTCCCTTCCCACCCTTACTACCACTTCTCCCTCTCGTCGTTACCCTCGTACTCCCCCACTTCTCCCTGAGGATTGCCATAGCGATTGCGATTCATCTTCCTCCGTTATTGACGACGGCGACGACATCGCTTCCTCCCCCGTCGTTCCTCGGAAAAAAACCCCTCTGCCTTTCGATCTCAACATTCCACCTTCCGATCTTTTTGATTTTAGCGGCGATGATCTTCGATGTACTGCTTTGTGCCTTTGACCACCGGCGGCGATGATGATGATGATGATGATGATGCAATAATTCAATATTTTATTGTTGTTGTTATTATTATTAATATTAATCTCCACCTTTTTTTTTAATTTTATTTTATTTTTTTTTTTTATGTGCTGGCACGGCAGGCATAGAGAAAAGAGAAATTACCCGACAAGATTATGAAAAATCAAAAGCAATGATTTATCCACACAACTATATATTATTCTTCCTTTTTTTTTCCTCCCTCTTTTACTTCTATGCTTATATTTGTAATGAATTACTAATTTTATTTCATAGTATTTAGTTTTTTTTAAAAAAAAATAAATAAATTATCTGTTATGGGGTTT

mRNA sequence

TAATACTACAGCCAGAGAAAAATACAAAAAAAATAAATAAATAAATAAAAAGAAATTATTTTAATTTAATTTTGGTGAAGAAGCTGAGAAGGTGGAGATGGTGGCTTCCAGTTTTTCCTCTTCACGGACCTCACCCTCTCTCTCTCTCTTCATCTCTCTCTCTCTCTCTCTTCCATTGATTTTCAATCTCCCATTTCTCCAACTCTCCACAATCTCTCTCCACTTTCCCATCATTTTTCCTTTCTTTTCTTTTTTTTTTTTTTTTTTTTATTAAATCCGTTATGAGGAGAGGGAGAGGGCCGCCCGTTGTACCACCCCCGCGTGAACCACCACCACCACCACCACCAGCAACCACCGGATCCGACCGGAGATATAGAGGTGTTAGAAAAAGGCCATGGGGAAGATTCGCGGCAGAGATCAGAGATCCATGGAAGAAGACCAGAGTCTGGTTAGGCACCTTCGATTCCGCAGAAGACGCCGCCCGTGCTTACGACAACGCTGCCATAACCCTCCGTGGCTCTAAAGCTAAAACCAATTTTCCCCTTCCCAATCCCACCTCCTTTTTCGATTATCCTCCTCATCCCGTCAACGCTCCAGATCCCTTCCCCGATCCCCGATTTCAGATTAGACCTACTTCCAGTAGTTTGAGTTCCACCGTTGAATCCTTCAGCGGTCCTCGCCCTCCCTCCTCCCTTCCCACCCTTACTACCACTTCTCCCTCTCGTCGTTACCCTCGTACTCCCCCACTTCTCCCTGAGGATTGCCATAGCGATTGCGATTCATCTTCCTCCGTTATTGACGACGGCGACGACATCGCTTCCTCCCCCGTCGTTCCTCGGAAAAAAACCCCTCTGCCTTTCGATCTCAACATTCCACCTTCCGATCTTTTTGATTTTAGCGGCGATGATCTTCGATGTACTGCTTTGTGCCTTTGACCACCGGCGGCGATGATGATGATGATGATGATGATGCAATAATTCAATATTTTATTGTTGTTGTTATTATTATTAATATTAATCTCCACCTTTTTTTTTAATTTTATTTTATTTTTTTTTTTTATGTGCTGGCACGGCAGGCATAGAGAAAAGAGAAATTACCCGACAAGATTATGAAAAATCAAAAGCAATGATTTATCCACACAACTATATATTATTCTTCCTTTTTTTTTCCTCCCTCTTTTACTTCTATGCTTATATTTGTAATGAATTACTAATTTTATTTCATAGTATTTAGTTTTTTTTAAAAAAAAATAAATAAATTATCTGTTATGGGGTTT

Coding sequence (CDS)

ATGAGGAGAGGGAGAGGGCCGCCCGTTGTACCACCCCCGCGTGAACCACCACCACCACCACCACCAGCAACCACCGGATCCGACCGGAGATATAGAGGTGTTAGAAAAAGGCCATGGGGAAGATTCGCGGCAGAGATCAGAGATCCATGGAAGAAGACCAGAGTCTGGTTAGGCACCTTCGATTCCGCAGAAGACGCCGCCCGTGCTTACGACAACGCTGCCATAACCCTCCGTGGCTCTAAAGCTAAAACCAATTTTCCCCTTCCCAATCCCACCTCCTTTTTCGATTATCCTCCTCATCCCGTCAACGCTCCAGATCCCTTCCCCGATCCCCGATTTCAGATTAGACCTACTTCCAGTAGTTTGAGTTCCACCGTTGAATCCTTCAGCGGTCCTCGCCCTCCCTCCTCCCTTCCCACCCTTACTACCACTTCTCCCTCTCGTCGTTACCCTCGTACTCCCCCACTTCTCCCTGAGGATTGCCATAGCGATTGCGATTCATCTTCCTCCGTTATTGACGACGGCGACGACATCGCTTCCTCCCCCGTCGTTCCTCGGAAAAAAACCCCTCTGCCTTTCGATCTCAACATTCCACCTTCCGATCTTTTTGATTTTAGCGGCGATGATCTTCGATGTACTGCTTTGTGCCTTTGA

Protein sequence

MRRGRGPPVVPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRFQIRPTSSSLSSTVESFSGPRPPSSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIASSPVVPRKKTPLPFDLNIPPSDLFDFSGDDLRCTALCL

Homology

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BLAST of Cmc06g0173941 vs. NCBI nr
Match: XP_008449140.1 (PREDICTED: ethylene-responsive transcription factor 3 [Cucumis melo])

HSP 1 Score: 440.7 bits (1132), Expect = 7.6e-120
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MRRGRGPPVVPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF 60
           MRRGRGPPVVPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF
Sbjct: 61  MRRGRGPPVVPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF 120

Query: 61  DSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRFQIRPTSS 120
           DSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRFQIRPTSS
Sbjct: 121 DSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRFQIRPTSS 180

Query: 121 SLSSTVESFSGPRPPSSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIAS 180
           SLSSTVESFSGPRPPSSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIAS
Sbjct: 181 SLSSTVESFSGPRPPSSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIAS 240

Query: 181 SPVVPRKKTPLPFDLNIPPSDLFDFSGDDLRCTALCL 218
           SPVVPRKKTPLPFDLNIPPSDLFDFSGDDLRCTALCL
Sbjct: 241 SPVVPRKKTPLPFDLNIPPSDLFDFSGDDLRCTALCL 277

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BLAST of Cmc06g0173941 vs. NCBI nr
Match: KAA0055850.1 (ethylene-responsive transcription factor 3 [Cucumis melo var. makuwa])

HSP 1 Score: 440.7 bits (1132), Expect = 7.6e-120
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MRRGRGPPVVPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF 60
           MRRGRGPPVVPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF
Sbjct: 1   MRRGRGPPVVPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF 60

Query: 61  DSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRFQIRPTSS 120
           DSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRFQIRPTSS
Sbjct: 61  DSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRFQIRPTSS 120

Query: 121 SLSSTVESFSGPRPPSSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIAS 180
           SLSSTVESFSGPRPPSSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIAS
Sbjct: 121 SLSSTVESFSGPRPPSSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIAS 180

Query: 181 SPVVPRKKTPLPFDLNIPPSDLFDFSGDDLRCTALCL 218
           SPVVPRKKTPLPFDLNIPPSDLFDFSGDDLRCTALCL
Sbjct: 181 SPVVPRKKTPLPFDLNIPPSDLFDFSGDDLRCTALCL 217

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BLAST of Cmc06g0173941 vs. NCBI nr
Match: KGN56099.1 (hypothetical protein Csa_010710 [Cucumis sativus])

HSP 1 Score: 408.3 bits (1048), Expect = 4.2e-110
Identity = 206/218 (94.50%), Postives = 209/218 (95.87%), Query Frame = 0


Query: 1   MRRGRGPPVVPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF 60
           MRRGRGP VVPPPREPP P    TTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF
Sbjct: 1   MRRGRGPAVVPPPREPPTP----TTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF 60

Query: 61  DSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRFQIRPTSS 120
           DSAEDAARAYD+AAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPR+QIRPTSS
Sbjct: 61  DSAEDAARAYDHAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRYQIRPTSS 120

Query: 121 SLSSTVESFSGPRPP-SSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIA 180
           SLSSTVESFSGPRPP SSLP LT+TSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIA
Sbjct: 121 SLSSTVESFSGPRPPSSSLPALTSTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIA 180

Query: 181 SSPVVPRKKTPLPFDLNIPPSDLFDFSGDDLRCTALCL 218
           SSPVVPRKKTPLPFDLNIPPSDLFDFS DDLRCTALCL
Sbjct: 181 SSPVVPRKKTPLPFDLNIPPSDLFDFSSDDLRCTALCL 214

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BLAST of Cmc06g0173941 vs. NCBI nr
Match: NP_001295846.1 (ethylene-responsive transcription factor 3 [Cucumis sativus] >CED89883.1 ethylene-responsive transcription factor 7 [Cucumis sativus])

HSP 1 Score: 404.4 bits (1038), Expect = 6.0e-109
Identity = 205/218 (94.04%), Postives = 208/218 (95.41%), Query Frame = 0


Query: 1   MRRGRGPPVVPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF 60
           MRRGRGP VVPPPREPP P    TTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF
Sbjct: 1   MRRGRGPAVVPPPREPPTP----TTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF 60

Query: 61  DSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRFQIRPTSS 120
           DSAEDAARAYD+AAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPR+QIRPTSS
Sbjct: 61  DSAEDAARAYDHAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRYQIRPTSS 120

Query: 121 SLSSTVESFSGPRPP-SSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIA 180
           SLSSTVESFSGPRPP SSLP LT+TSPSRRYPRTPPLL EDCHSDCDSSSSVIDDGDDIA
Sbjct: 121 SLSSTVESFSGPRPPSSSLPALTSTSPSRRYPRTPPLLLEDCHSDCDSSSSVIDDGDDIA 180

Query: 181 SSPVVPRKKTPLPFDLNIPPSDLFDFSGDDLRCTALCL 218
           SSPVVPRKKTPLPFDLNIPPSDLFDFS DDLRCTALCL
Sbjct: 181 SSPVVPRKKTPLPFDLNIPPSDLFDFSSDDLRCTALCL 214

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BLAST of Cmc06g0173941 vs. NCBI nr
Match: XP_038903183.1 (ethylene-responsive transcription factor 3 [Benincasa hispida])

HSP 1 Score: 361.3 bits (926), Expect = 5.8e-96
Identity = 193/230 (83.91%), Postives = 200/230 (86.96%), Query Frame = 0


Query: 1   MRRGRGPP----VVPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVW 60
           MRRGRG       VP PREPP      TTGS+RRYRGVRKRPWGRFAAEIRDPWKKTRVW
Sbjct: 1   MRRGRGAAAADVAVPAPREPP------TTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVW 60

Query: 61  LGTFDSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDYPP-------HPVN-APDPF 120
           LGTFDSAEDAARAYDNAAITLRG KAKTNFPLPNPTSFFDYPP       HPVN APDPF
Sbjct: 61  LGTFDSAEDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPPPHHHPVNAAPDPF 120

Query: 121 PDPRFQIRPTSSSLSSTVESFSGPRPPSSLPT-LTTTSPSRRYPRTPPLLPEDCHSDCDS 180
           PDPRFQIRPTSSSLSSTVESFSGPRPPS++ T +TTTSPSRRYPRTPP+LPEDCHSDCDS
Sbjct: 121 PDPRFQIRPTSSSLSSTVESFSGPRPPSTVTTAVTTTSPSRRYPRTPPVLPEDCHSDCDS 180

Query: 181 SSSVIDDGDDIASSPVVPRKKTPLPFDLNIPPSDLFDFSGDDLRCTALCL 218
           SSSV+DDGDDIASS VVPR + PLPFDLNIPPSDL DFS DDLRCTALCL
Sbjct: 181 SSSVVDDGDDIASSAVVPR-RPPLPFDLNIPPSDLLDFSADDLRCTALCL 223

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BLAST of Cmc06g0173941 vs. ExPASy Swiss-Prot
Match: O80339 (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=ERF3 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 6.8e-55
Identity = 142/242 (58.68%), Postives = 156/242 (64.46%), Query Frame = 0


Query: 1   MRRGRGPPVVPPPREPPPPPPPATTGS--DRRYRGVRKRPWGRFAAEIRDPWKKTRVWLG 60
           MRRGRG   V       P    A  GS  + R+RGVRKRPWGRFAAEIRDPWKK RVWLG
Sbjct: 1   MRRGRGSSAV-----AGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLG 60

Query: 61  TFDSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDYPPHP-----------VNAPDP 120
           TFDSAE+AARAYD+AA  LRG KAKTNFP+ + +     PP P            N  DP
Sbjct: 61  TFDSAEEAARAYDSAARNLRGPKAKTNFPIDSSS-----PPPPNLRFNQIRNQNQNQVDP 120

Query: 121 FPDPR--------FQI--RPTSSSLSSTVESFSGPRPPSSLPTLTTTSPSRRYPRTPPLL 180
           F D R        F I  RPTSSS+SSTVESFSGPRP +  P  T     +RYPRTPP++
Sbjct: 121 FMDHRLFTDHQQQFPIVNRPTSSSMSSTVESFSGPRPTTMKPATT-----KRYPRTPPVV 180

Query: 181 PEDCHSDCDSSSSVIDDGDDIASSPVVPRKKTPLPFDLNIPPSDLFD-FSG-DDLRCTAL 218
           PEDCHSDCDSSSSVIDD DDIASS    R+  P  FDLN PP D  D F+G DDL CT L
Sbjct: 181 PEDCHSDCDSSSSVIDDDDDIASSS--RRRNPPFQFDLNFPPLDCVDLFNGADDLHCTDL 225

[Close]

BLAST of Cmc06g0173941 vs. ExPASy Swiss-Prot
Match: Q9SXS8 (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 8.8e-55
Identity = 137/236 (58.05%), Postives = 155/236 (65.68%), Query Frame = 0


Query: 1   MRRGRGPPVVPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF 60
           MRRGR       P      P  +    + R+RGVRKRPWGRFAAEIRDPWKKTRVWLGTF
Sbjct: 1   MRRGR---AAAAPAPVTGEPNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTF 60

Query: 61  DSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSF-FDYPPHPVNAPDPFPDPRF------ 120
           DSAEDAARAYD AA  LRG KAKTNFPLP      F+   +P N  DPF D RF      
Sbjct: 61  DSAEDAARAYDAAARALRGPKAKTNFPLPYAHHHQFNQGHNPNN--DPFVDSRFYPQDNP 120

Query: 121 --QIRPTSSSLSSTVESFSGPRPPSSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSSSSV 180
               RPTSSS+SSTVESFSGPRPP + P   TT+ SR+Y R+PP++P+DCHSDCDSSSSV
Sbjct: 121 IISQRPTSSSMSSTVESFSGPRPPPA-PRQQTTASSRKYTRSPPVVPDDCHSDCDSSSSV 180

Query: 181 ID----------DGDDIASSPVVPRKKTPLPFDLNIPPSDLFDFSGDDLRCTALCL 218
           +D          D D+IASS      + PL FDLN+PP  + D   DDL CTALCL
Sbjct: 181 VDHGDCEKENDNDNDNIASSSF----RKPLLFDLNLPP-PMDDAGADDLHCTALCL 225

[Close]

BLAST of Cmc06g0173941 vs. ExPASy Swiss-Prot
Match: Q9LDE4 (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana OX=3702 GN=ERF7 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.8e-52
Identity = 141/253 (55.73%), Postives = 156/253 (61.66%), Query Frame = 0


Query: 1   MRRGRGPPVVPPPREPPPPPPPATTG---SDRRYRGVRKRPWGRFAAEIRDPWKKTRVWL 60
           MR+GRG  VV P         P T G    + RYRGVRKRPWGRFAAEIRDP KK+RVWL
Sbjct: 1   MRKGRGSSVVGPAL-------PVTAGGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWL 60

Query: 61  GTFDSAEDAARAYDNAAITLRGSKAKTNFPL----PNPTSFFDY--------PPHPVNAP 120
           GTFDSA DAARAYD AA  LRG KAKTNFP+     +P     Y        PP   N  
Sbjct: 61  GTFDSAVDAARAYDTAARNLRGPKAKTNFPIDCSPSSPLQPLTYLHNQNLCSPPVIQNQI 120

Query: 121 DPFPDPR------FQ--------IRPTSSSLSSTVESFSGPRPPSSLPTLTTTSPS---- 180
           DPF D R      FQ         RP SSS+SSTV+S SGPRP  +    ++ +      
Sbjct: 121 DPFMDHRLYGGGNFQEQQQQQIISRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHAI 180

Query: 181 RRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIASSPVVPRKKTPLPFDLNIPPSDLFD-FS 218
           +RYPRTPP+ PEDCHSDCDSSSSVIDDGDDIASS    R+KTP  FDLN PP D  D F+
Sbjct: 181 KRYPRTPPVAPEDCHSDCDSSSSVIDDGDDIASSS--SRRKTPFQFDLNFPPLDGVDLFA 240

[Close]

BLAST of Cmc06g0173941 vs. ExPASy Swiss-Prot
Match: Q9FE67 (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.9e-23
Identity = 51/70 (72.86%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 24 TTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNAAITLRGSKAK 83
          T   +  +RGVRKRPWGR+AAEIRDP KKTRVWLGTFD+AE+AARAYD AA   RGSKAK
Sbjct: 26 TMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAK 85

Query: 84 TNFPLPNPTS 94
          TNFPLP  ++
Sbjct: 86 TNFPLPGEST 95

[Close]

BLAST of Cmc06g0173941 vs. ExPASy Swiss-Prot
Match: O80340 (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.0e-22
Identity = 54/74 (72.97%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 20 PPPATT------GSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNA 79
          P PATT        + RYRGVRKRPWGR+AAEIRDP KKTRVWLGTFD+AE+AARAYD A
Sbjct: 8  PDPATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTA 67

Query: 80 AITLRGSKAKTNFP 88
          A   RG+KAKTNFP
Sbjct: 68 ARDFRGAKAKTNFP 81

[Close]

BLAST of Cmc06g0173941 vs. ExPASy TrEMBL
Match: A0A5A7UL32 (Ethylene-responsive transcription factor 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold104G00260 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 3.7e-120
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MRRGRGPPVVPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF 60
           MRRGRGPPVVPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF
Sbjct: 1   MRRGRGPPVVPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF 60

Query: 61  DSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRFQIRPTSS 120
           DSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRFQIRPTSS
Sbjct: 61  DSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRFQIRPTSS 120

Query: 121 SLSSTVESFSGPRPPSSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIAS 180
           SLSSTVESFSGPRPPSSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIAS
Sbjct: 121 SLSSTVESFSGPRPPSSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIAS 180

Query: 181 SPVVPRKKTPLPFDLNIPPSDLFDFSGDDLRCTALCL 218
           SPVVPRKKTPLPFDLNIPPSDLFDFSGDDLRCTALCL
Sbjct: 181 SPVVPRKKTPLPFDLNIPPSDLFDFSGDDLRCTALCL 217

[Close]

BLAST of Cmc06g0173941 vs. ExPASy TrEMBL
Match: A0A1S3BM09 (ethylene-responsive transcription factor 3 OS=Cucumis melo OX=3656 GN=LOC103491089 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 3.7e-120
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MRRGRGPPVVPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF 60
           MRRGRGPPVVPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF
Sbjct: 61  MRRGRGPPVVPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF 120

Query: 61  DSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRFQIRPTSS 120
           DSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRFQIRPTSS
Sbjct: 121 DSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRFQIRPTSS 180

Query: 121 SLSSTVESFSGPRPPSSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIAS 180
           SLSSTVESFSGPRPPSSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIAS
Sbjct: 181 SLSSTVESFSGPRPPSSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIAS 240

Query: 181 SPVVPRKKTPLPFDLNIPPSDLFDFSGDDLRCTALCL 218
           SPVVPRKKTPLPFDLNIPPSDLFDFSGDDLRCTALCL
Sbjct: 241 SPVVPRKKTPLPFDLNIPPSDLFDFSGDDLRCTALCL 277

[Close]

BLAST of Cmc06g0173941 vs. ExPASy TrEMBL
Match: A0A0A0L500 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G073900 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.0e-110
Identity = 206/218 (94.50%), Postives = 209/218 (95.87%), Query Frame = 0


Query: 1   MRRGRGPPVVPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF 60
           MRRGRGP VVPPPREPP P    TTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF
Sbjct: 1   MRRGRGPAVVPPPREPPTP----TTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF 60

Query: 61  DSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRFQIRPTSS 120
           DSAEDAARAYD+AAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPR+QIRPTSS
Sbjct: 61  DSAEDAARAYDHAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRYQIRPTSS 120

Query: 121 SLSSTVESFSGPRPP-SSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIA 180
           SLSSTVESFSGPRPP SSLP LT+TSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIA
Sbjct: 121 SLSSTVESFSGPRPPSSSLPALTSTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIA 180

Query: 181 SSPVVPRKKTPLPFDLNIPPSDLFDFSGDDLRCTALCL 218
           SSPVVPRKKTPLPFDLNIPPSDLFDFS DDLRCTALCL
Sbjct: 181 SSPVVPRKKTPLPFDLNIPPSDLFDFSSDDLRCTALCL 214

[Close]

BLAST of Cmc06g0173941 vs. ExPASy TrEMBL
Match: A0A090IQD0 (Ethylene-responsive transcription factor 7 OS=Cucumis sativus OX=3659 GN=erf-7 PE=2 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 2.9e-109
Identity = 205/218 (94.04%), Postives = 208/218 (95.41%), Query Frame = 0


Query: 1   MRRGRGPPVVPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF 60
           MRRGRGP VVPPPREPP P    TTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF
Sbjct: 1   MRRGRGPAVVPPPREPPTP----TTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF 60

Query: 61  DSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRFQIRPTSS 120
           DSAEDAARAYD+AAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPR+QIRPTSS
Sbjct: 61  DSAEDAARAYDHAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRYQIRPTSS 120

Query: 121 SLSSTVESFSGPRPP-SSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIA 180
           SLSSTVESFSGPRPP SSLP LT+TSPSRRYPRTPPLL EDCHSDCDSSSSVIDDGDDIA
Sbjct: 121 SLSSTVESFSGPRPPSSSLPALTSTSPSRRYPRTPPLLLEDCHSDCDSSSSVIDDGDDIA 180

Query: 181 SSPVVPRKKTPLPFDLNIPPSDLFDFSGDDLRCTALCL 218
           SSPVVPRKKTPLPFDLNIPPSDLFDFS DDLRCTALCL
Sbjct: 181 SSPVVPRKKTPLPFDLNIPPSDLFDFSSDDLRCTALCL 214

[Close]

BLAST of Cmc06g0173941 vs. ExPASy TrEMBL
Match: A0A6J1HJM8 (ethylene-responsive transcription factor 3-like OS=Cucurbita maxima OX=3661 GN=LOC111465111 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 5.0e-85
Identity = 178/229 (77.73%), Postives = 183/229 (79.91%), Query Frame = 0


Query: 1   MRRGRGPPVVPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF 60
           MRRGRG            PP     GS+RRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF
Sbjct: 1   MRRGRGAATATAAAREAAPP-----GSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF 60

Query: 61  DSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDYP--------PHPVNAPDPFPDPR 120
           DSAEDAARAYDNAAITLRG KAKTNFPL NP SFFDYP        PHPVNAPDPF DPR
Sbjct: 61  DSAEDAARAYDNAAITLRGPKAKTNFPLANPISFFDYPPYPHPHPHPHPVNAPDPFLDPR 120

Query: 121 FQI----RPTSSSLSSTVESFSGPRPPSSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSS 180
           FQI    RPTSSSLSSTVESFSGP PPS+    TT SPSRRYPRTPPLLPEDCHSDCDSS
Sbjct: 121 FQINNPHRPTSSSLSSTVESFSGPHPPSA--AATTASPSRRYPRTPPLLPEDCHSDCDSS 180

Query: 181 SSVIDDGDDIASSPVVPRKKTPLPFDLNIPPSDLFDFSGDDLRCTALCL 218
           SSVIDDGDDIASS +VPR K PLPFDLNIPPS+L D + DDL CTALCL
Sbjct: 181 SSVIDDGDDIASSSMVPR-KPPLPFDLNIPPSELLDLAADDLGCTALCL 221

[Close]

BLAST of Cmc06g0173941 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 215.3 bits (547), Expect = 4.8e-56
Identity = 142/242 (58.68%), Postives = 156/242 (64.46%), Query Frame = 0


Query: 1   MRRGRGPPVVPPPREPPPPPPPATTGS--DRRYRGVRKRPWGRFAAEIRDPWKKTRVWLG 60
           MRRGRG   V       P    A  GS  + R+RGVRKRPWGRFAAEIRDPWKK RVWLG
Sbjct: 1   MRRGRGSSAV-----AGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLG 60

Query: 61  TFDSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDYPPHP-----------VNAPDP 120
           TFDSAE+AARAYD+AA  LRG KAKTNFP+ + +     PP P            N  DP
Sbjct: 61  TFDSAEEAARAYDSAARNLRGPKAKTNFPIDSSS-----PPPPNLRFNQIRNQNQNQVDP 120

Query: 121 FPDPR--------FQI--RPTSSSLSSTVESFSGPRPPSSLPTLTTTSPSRRYPRTPPLL 180
           F D R        F I  RPTSSS+SSTVESFSGPRP +  P  T     +RYPRTPP++
Sbjct: 121 FMDHRLFTDHQQQFPIVNRPTSSSMSSTVESFSGPRPTTMKPATT-----KRYPRTPPVV 180

Query: 181 PEDCHSDCDSSSSVIDDGDDIASSPVVPRKKTPLPFDLNIPPSDLFD-FSG-DDLRCTAL 218
           PEDCHSDCDSSSSVIDD DDIASS    R+  P  FDLN PP D  D F+G DDL CT L
Sbjct: 181 PEDCHSDCDSSSSVIDDDDDIASSS--RRRNPPFQFDLNFPPLDCVDLFNGADDLHCTDL 225

[Close]

BLAST of Cmc06g0173941 vs. TAIR 10
Match: AT3G20310.1 (ethylene response factor 7 )

HSP 1 Score: 207.2 bits (526), Expect = 1.3e-53
Identity = 141/253 (55.73%), Postives = 156/253 (61.66%), Query Frame = 0


Query: 1   MRRGRGPPVVPPPREPPPPPPPATTG---SDRRYRGVRKRPWGRFAAEIRDPWKKTRVWL 60
           MR+GRG  VV P         P T G    + RYRGVRKRPWGRFAAEIRDP KK+RVWL
Sbjct: 1   MRKGRGSSVVGPAL-------PVTAGGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWL 60

Query: 61  GTFDSAEDAARAYDNAAITLRGSKAKTNFPL----PNPTSFFDY--------PPHPVNAP 120
           GTFDSA DAARAYD AA  LRG KAKTNFP+     +P     Y        PP   N  
Sbjct: 61  GTFDSAVDAARAYDTAARNLRGPKAKTNFPIDCSPSSPLQPLTYLHNQNLCSPPVIQNQI 120

Query: 121 DPFPDPR------FQ--------IRPTSSSLSSTVESFSGPRPPSSLPTLTTTSPS---- 180
           DPF D R      FQ         RP SSS+SSTV+S SGPRP  +    ++ +      
Sbjct: 121 DPFMDHRLYGGGNFQEQQQQQIISRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHAI 180

Query: 181 RRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIASSPVVPRKKTPLPFDLNIPPSDLFD-FS 218
           +RYPRTPP+ PEDCHSDCDSSSSVIDDGDDIASS    R+KTP  FDLN PP D  D F+
Sbjct: 181 KRYPRTPPVAPEDCHSDCDSSSSVIDDGDDIASSS--SRRKTPFQFDLNFPPLDGVDLFA 240

[Close]

BLAST of Cmc06g0173941 vs. TAIR 10
Match: AT5G44210.1 (erf domain protein 9 )

HSP 1 Score: 108.6 bits (270), Expect = 6.3e-24
Identity = 51/70 (72.86%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 24 TTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNAAITLRGSKAK 83
          T   +  +RGVRKRPWGR+AAEIRDP KKTRVWLGTFD+AE+AARAYD AA   RGSKAK
Sbjct: 26 TMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAK 85

Query: 84 TNFPLPNPTS 94
          TNFPLP  ++
Sbjct: 86 TNFPLPGEST 95

[Close]

BLAST of Cmc06g0173941 vs. TAIR 10
Match: AT3G15210.1 (ethylene responsive element binding factor 4 )

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-23
Identity = 54/74 (72.97%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 20 PPPATT------GSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNA 79
          P PATT        + RYRGVRKRPWGR+AAEIRDP KKTRVWLGTFD+AE+AARAYD A
Sbjct: 8  PDPATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTA 67

Query: 80 AITLRGSKAKTNFP 88
          A   RG+KAKTNFP
Sbjct: 68 ARDFRGAKAKTNFP 81

[Close]

BLAST of Cmc06g0173941 vs. TAIR 10
Match: AT1G28360.1 (ERF domain protein 12 )

HSP 1 Score: 105.5 bits (262), Expect = 5.4e-23
Identity = 52/78 (66.67%), Postives = 56/78 (71.79%), Query Frame = 0


Query: 24  TTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNAAITLRGSKAK 83
           T   +  YRGVRKRPWGR+AAEIRDPWKKTRVWLGTFD+ E+AA AYD AA  LRG KAK
Sbjct: 5   TCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAK 64

Query: 84  TNFPLPNPTSFFDYPPHP 102
           TNFP P        P  P
Sbjct: 65  TNFPSPLSLDLNHLPSAP 82

The following BLAST results are available for this feature:

BLAST of Cmc06g0173941 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449140.1	7.6e-120	100.00	PREDICTED: ethylene-responsive transcription factor 3 [Cucumis melo]	[more]
KAA0055850.1	7.6e-120	100.00	ethylene-responsive transcription factor 3 [Cucumis melo var. makuwa]	[more]
KGN56099.1	4.2e-110	94.50	hypothetical protein Csa_010710 [Cucumis sativus]	[more]
NP_001295846.1	6.0e-109	94.04	ethylene-responsive transcription factor 3 [Cucumis sativus] >CED89883.1 ethylen...	[more]
XP_038903183.1	5.8e-96	83.91	ethylene-responsive transcription factor 3 [Benincasa hispida]	[more]

BLAST of Cmc06g0173941 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80339	6.8e-55	58.68	Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9SXS8	8.8e-55	58.05	Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 ...	[more]
Q9LDE4	1.8e-52	55.73	Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9FE67	8.9e-23	72.86	Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
O80340	2.0e-22	72.97	Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]

BLAST of Cmc06g0173941 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UL32	3.7e-120	100.00	Ethylene-responsive transcription factor 3 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BM09	3.7e-120	100.00	ethylene-responsive transcription factor 3 OS=Cucumis melo OX=3656 GN=LOC1034910...	[more]
A0A0A0L500	2.0e-110	94.50	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G073900 PE=...	[more]
A0A090IQD0	2.9e-109	94.04	Ethylene-responsive transcription factor 7 OS=Cucumis sativus OX=3659 GN=erf-7 P...	[more]
A0A6J1HJM8	5.0e-85	77.73	ethylene-responsive transcription factor 3-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Cmc06g0173941 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50640.1	4.8e-56	58.68	ethylene responsive element binding factor 3	[more]
AT3G20310.1	1.3e-53	55.73	ethylene response factor 7	[more]
AT5G44210.1	6.3e-24	72.86	erf domain protein 9	[more]
AT3G15210.1	1.4e-23	72.97	ethylene responsive element binding factor 4	[more]
AT1G28360.1	5.4e-23	66.67	ERF domain protein 12	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 31..42 score: 67.73 coord: 53..69 score: 69.09
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 30..93 e-value: 1.9E-38 score: 143.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 30..79 e-value: 7.4E-14 score: 51.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 30..87 score: 23.604036
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 30..87 e-value: 2.12828E-33 score: 112.75
IPR017392	AP2/ERF transcription factor ERF/PTI6	PIRSF	PIRSF038123	PTI6	coord: 13..93 e-value: 2.3E-25 score: 87.6 coord: 141..212 e-value: 55.0 score: 1.2
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 29..88 e-value: 7.5E-28 score: 98.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..188
None	No IPR available	PANTHER	PTHR31677:SF157	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3	coord: 26..183
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 26..183
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 30..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0173941.1	Cmc06g0173941.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity