Cmc04g0120901 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0120901
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionProtein kinase domain-containing protein
LocationCMiso1.1chr04: 36217564 .. 36220254 (+)
RNA-Seq ExpressionCmc04g0120901
SyntenyCmc04g0120901
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTGGATAAGTAAATTGAACTATAGGTACACCGTAGATAGATGTTAGTTGAACAAAGCTTATTTTGCTTTTATCAATTTAGTGAGAAAAAGTAGATACAAAAAGCAATTTGTTTACCTGCCTACATCAATGGAAGTTGAAGAGAGAAAACTAGTGGTTGAAGTACGGGAAGAAGGTGGAATAAATTGAGTGAATCCGGAGCTAGATTGAAATGTAATTTGAGAATAGGGTGAAGGATCAAAAGCAAGAATTTGGTCTTCTCCATTAAGAAACCTTGTGACTTGCCTCATGCTTGGCCTAGCTTCAGGGTTGTAATGGGAACAAAGAAGTCCAAGTTTCAAAACCATTTCCATCTCAACCGTGTCATAAATTTCATTCAACTTTGGATCAGCTGCATCAAGAATACGACCTTTTTCATGGCATTCCATTACCCAATCTACCAATATGAATATATCTGATTCTAGAGGTCTTCTTCCACAAGCCACTTCAAGAATCAGTACCCCATATGCAAAGACATCTGTAGTTTTCGATGCTTTTCCGGTGCGAGCCAACTCGGGTGAGATGTACCCGATTGTGCCAACGACGCTGGTTGTATGTGATATTTGGTCATGGTCGTATAACCTTGCAAGACCGAAGTCGCTTAGTCGAGCATTCATGCTAATATCTATCAATATATTACTTGGCTTAACATCTCGATGGATCACGACTTGTTCCCATTCTTCGTGTAAGTATAACAATCCACCAGCAACTCCTTTGAGGATGTTGATTCTTTGTTCCCAATTCAGTACAAAGTTGTCTTTTGGATGGTAAAGGAGAGAATCCAAGCTTCCGTTTGGAATATAGTCATAAACCAAGAGAAGATCGTTCTGTTTCTTGCACCATCCTTGGAGATTTACCAAGTTCTTGTGTCTTAGTCGGCCCAAACTTTCAATTTCTGCAGCGAATTCCCTCATTCCTTGATTCGCATTTCTTGTTATCCTCTTTACAGCAACTTCACATCCCGTGGAAGGTAAGACACCTCTGTATACTGAGCCAAAGCCTCCTGATCCGATGAGCTCGGAGTCTTTAAATCCCTTTGTTGCTTTGTACAGATCTCTATAACCAAATCTGTGAGGACAATCTCTTTCCCATTCTTCAAGGTTCTCACCTCGGAACCTTCTTCTGAAAATGGAGGCTAAGAACAAAATTCCCATGAGTGTGATGGCAGATAATATTGGAACAACGACAGTGACTAGAGGATTGAATGTTGACGATGAAGGCAGAGGACTTTGCACTTTCAGTGGTGGAGGAAGTTGATGAACATTTAACTGAGGTGCTGATTCGTTGATTGCAAAACTCCAACCTGAAATGTAGTGGAAGCTTGTTTCTTTTCCAGTTGATGCAGAGAAGCCCACATACATCATCTCATTCAAAACTGGAGTCAAGTTAATGGAATATGAGATCAATGGCTCAGTTGGTCTGATTACATTTGCGGGAGCTATTGTGACATTCACTAACTTACTACGCCCATCATAATCGATCCAAGCTTGGATTAGATCACCAGTATCCAAATACACCTCCGTCTTCACATCAGAGCCATAGTCAGAATACTCAGCCGATTCAGACGCACTTGATCGCACCCCATTCTTGTTGATTCCAACATGGTTGCCTTTAAAATTTTTTTCGTCATCGTGGCCATTAACAGTATCAAATTCGACTGCAAAGATATGATTCGAAGGGTCACCATTGTTGGAGGAGTTGAATAATCCCAAGTAATGTTCACTAGCTGCACCTGGAAATTGGGTTGATGGAGCCATAACAAAGGCGAGGCCATATCCAACTGGTGGACCAGAGCTTGAAGGAACAATCGCAAACACAAAAGATGTGCTGAAAGAAGAAACATCTGAAACTGTTTCAGAATTTATGTCGAACATCGGCTGGGCAATAGGATGGAAGGCACGGCCGATAACGTACTGGGAGCTGTCGGTTAGTCTTAACAAGCCAGAAGGCTCTATAAAAGCTCCTTGATCAAGGTCCAGACCTGAATTATTGAATCCATGGTAGACAAATGGAGCTTGAACACGAAGAACAGAGACACAGAAAAAAAATATCACAAGGCAAGGTAAAGAAAATCCCATAGCCATGTGAGGAGATTTATAAGAAAGAAAAGAAAGAAATCACGGGTTAAGAAGAAAACAATAGTTTTCCATGTACGTAACTATGAAAGAAACTCTAATAAATAGTGAGATTAAGATTTGGAAATGGCAATTGTCAGGAAGATGTTAGAAGTCTGGGACCATTGCTAAACCTTCCATTGTCAAAGAAATAGTAATTTTCAATAATTTGAATTTTTGTGATGCCAATTAAATACTGACAATGATAGAGAAAATTGTGATGAGACGTGGGAGATTAATTGAAATGAAACCATAGGAATTAGGAGTGTGTCCATATAGAAAAATCAAGAGAATTTGAACATAAAGACAATTGCCCTCCAGAAATGTGGTGGAGAAGTGAGTTTGAAGTTTCTAAGCATCTAGAGTCCAGCCAGCATTGGTTGACAAGCCTCAAGTCTTCCAACTATTTTCTTTTTCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTCATTTATATTTCTTTATAAACTATTTCAACCTTGAGATATTTCTCTTTTTCTACCATTTTCTATGAAGGCAATGGCTTGGGGACGGG

mRNA sequence

TGTGGATAAGTAAATTGAACTATAGGTACACCGTAGATAGATGTTAGTTGAACAAAGCTTATTTTGCTTTTATCAATTTAGTGAGAAAAAGTAGATACAAAAAGCAATTTGTTTACCTGCCTACATCAATGGAAGTTGAAGAGAGAAAACTAGTGGTTGAAGTACGGGAAGAAGGTGGAATAAATTGAGTGAATCCGGAGCTAGATTGAAATGTAATTTGAGAATAGGGTGAAGGATCAAAAGCAAGAATTTGGTCTTCTCCATTAAGAAACCTTGTGACTTGCCTCATGCTTGGCCTAGCTTCAGGGTTGTAATGGGAACAAAGAAGTCCAAGTTTCAAAACCATTTCCATCTCAACCGTGTCATAAATTTCATTCAACTTTGGATCAGCTGCATCAAGAATACGACCTTTTTCATGGCATTCCATTACCCAATCTACCAATATGAATATATCTGATTCTAGAGGTCTTCTTCCACAAGCCACTTCAAGAATCAGTACCCCATATGCAAAGACATCTGTAGTTTTCGATGCTTTTCCGGTGCGAGCCAACTCGGGTGAGATGTACCCGATTGTGCCAACGACGCTGGTTGTATGTGATATTTGGTCATGGTCGTATAACCTTGCAAGACCGAAGTCGCTTAGTCGAGCATTCATGCTAATATCTATCAATATATTACTTGGCTTAACATCTCGATGGATCACGACTTGTTCCCATTCTTCGTGTAAGTATAACAATCCACCAGCAACTCCTTTGAGGATGTTGATTCTTTGTTCCCAATTCAGTACAAAGTTGTCTTTTGGATGGTAAAGGAGAGAATCCAAGCTTCCGTTTGGAATATAGTCATAAACCAAGAGAAGATCGTTCTGTTTCTTGCACCATCCTTGGAGATTTACCAAGTTCTTGTGTCTTAGTCGGCCCAAACTTTCAATTTCTGCAGCGAATTCCCTCATTCCTTGATTCGCATTTCTTGTTATCCTCTTTACAGCAACTTCACATCCCGTGGAAGATCTCTATAACCAAATCTGTGAGGACAATCTCTTTCCCATTCTTCAAGGTTCTCACCTCGGAACCTTCTTCTGAAAATGGAGGCTAAGAACAAAATTCCCATGAGTGTGATGGCAGATAATATTGGAACAACGACAGTGACTAGAGGATTGAATGTTGACGATGAAGGCAGAGGACTTTGCACTTTCAGTGGTGGAGGAAGTTGATGAACATTTAACTGAGGTGCTGATTCGTTGATTGCAAAACTCCAACCTGAAATGTAGTGGAAGCTTGTTTCTTTTCCAGTTGATGCAGAGAAGCCCACATACATCATCTCATTCAAAACTGGAGTCAAGTTAATGGAATATGAGATCAATGGCTCAGTTGGTCTGATTACATTTGCGGGAGCTATTGTGACATTCACTAACTTACTACGCCCATCATAATCGATCCAAGCTTGGATTAGATCACCAGTATCCAAATACACCTCCGTCTTCACATCAGAGCCATAGTCAGAATACTCAGCCGATTCAGACGCACTTGATCGCACCCCATTCTTGTTGATTCCAACATGGTTGCCTTTAAAATTTTTTTCGTCATCGTGGCCATTAACAGTATCAAATTCGACTGCAAAGATATGATTCGAAGGGTCACCATTGTTGGAGGAGTTGAATAATCCCAAGTAATGTTCACTAGCTGCACCTGGAAATTGGGTTGATGGAGCCATAACAAAGGCGAGGCCATATCCAACTGGTGGACCAGAGCTTGAAGGAACAATCGCAAACACAAAAGATGTGCTGAAAGAAGAAACATCTGAAACTGTTTCAGAATTTATGTCGAACATCGGCTGGGCAATAGGATGGAAGGCACGGCCGATAACGTACTGGGAGCTGTCGGTTAGTCTTAACAAGCCAGAAGGCTCTATAAAAGCTCCTTGATCAAGGTCCAGACCTGAATTATTGAATCCATGGTAGACAAATGGAGCTTGAACACGAAGAACAGAGACACAGAAAAAAAATATCACAAGGCAAGGTAAAGAAAATCCCATAGCCATGTGAGGAGATTTATAAGAAAGAAAAGAAAGAAATCACGGGTTAAGAAGAAAACAATAGTTTTCCATGTACGTAACTATGAAAGAAACTCTAATAAATAGTGAGATTAAGATTTGGAAATGGCAATTGTCAGGAAGATGTTAGAAGTCTGGGACCATTGCTAAACCTTCCATTGTCAAAGAAATAGTAATTTTCAATAATTTGAATTTTTGTGATGCCAATTAAATACTGACAATGATAGAGAAAATTGTGATGAGACGTGGGAGATTAATTGAAATGAAACCATAGGAATTAGGAGTGTGTCCATATAGAAAAATCAAGAGAATTTGAACATAAAGACAATTGCCCTCCAGAAATGTGGTGGAGAAGTGAGTTTGAAGTTTCTAAGCATCTAGAGTCCAGCCAGCATTGGTTGACAAGCCTCAAGTCTTCCAACTATTTTCTTTTTCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTCATTTATATTTCTTTATAAACTATTTCAACCTTGAGATATTTCTCTTTTTCTACCATTTTCTATGAAGGCAATGGCTTGGGGACGGG

Coding sequence (CDS)

ATGAATATATCTGATTCTAGAGGTCTTCTTCCACAAGCCACTTCAAGAATCAGTACCCCATATGCAAAGACATCTGTAGTTTTCGATGCTTTTCCGGTGCGAGCCAACTCGGGTGAGATGTACCCGATTGTGCCAACGACGCTGGTTGTATGTGATATTTGGTCATGGTCGTATAACCTTGCAAGACCGAAGTCGCTTAGTCGAGCATTCATGCTAATATCTATCAATATATTACTTGGCTTAACATCTCGATGGATCACGACTTGTTCCCATTCTTCGTGTAAGTATAACAATCCACCAGCAACTCCTTTGAGGATGTTGATTCTTTGTTCCCAATTCAGTACAAAGTTGTCTTTTGGATGGTAA

Protein sequence

MNISDSRGLLPQATSRISTPYAKTSVVFDAFPVRANSGEMYPIVPTTLVVCDIWSWSYNLARPKSLSRAFMLISINILLGLTSRWITTCSHSSCKYNNPPATPLRMLILCSQFSTKLSFGW
Homology
BLAST of Cmc04g0120901 vs. NCBI nr
Match: CAB3498045.1 (unnamed protein product [Digitaria exilis])

HSP 1 Score: 104.0 bits (258), Expect = 9.3e-19
Identity = 56/91 (61.54%), Postives = 61/91 (67.03%), Query Frame = 0

Query: 6   SRGLLPQATSRISTPYAKTSVVFDAFPVRANSGEMYPIVPTTLVVCDIWSWSYNLARPKS 65
           S GL PQ TSR+  P A TSV  DAFP  A+SG  YP+VPTT VV     WSYNLARPKS
Sbjct: 116 STGLRPQTTSRMKAPKANTSVRGDAFPDLASSGARYPMVPTTWVVWGSAPWSYNLARPKS 175

Query: 66  LSRAFMLISINILLGLTSRWITTCSHSSCKY 97
            SR F+ +S   LL L SRWITTCS SS  Y
Sbjct: 176 PSRPFISLSRRTLLALMSRWITTCSQSSSLY 206

BLAST of Cmc04g0120901 vs. NCBI nr
Match: CAB3497643.1 (unnamed protein product [Digitaria exilis])

HSP 1 Score: 100.9 bits (250), Expect = 7.9e-18
Identity = 54/95 (56.84%), Postives = 61/95 (64.21%), Query Frame = 0

Query: 8   GLLPQATSRISTPYAKTSVVFDAFPVRANSGEMYPIVPTTLVVCDIWSWSYNLARPKSLS 67
           GL PQATS    P A TSV+  AFPV   SG MYP VP T VVC +  WSY+ ARPKSLS
Sbjct: 27  GLRPQATSSKKAPKANTSVLVVAFPVLLISGAMYPSVPMTCVVCGLLPWSYSRARPKSLS 86

Query: 68  RAFMLISINILLGLTSRWITTCSHSSCKYNNPPAT 103
             FM  S + L  L SR  TTCS  SC+Y++P AT
Sbjct: 87  FPFMSASRSTLADLMSRCTTTCSDPSCRYSSPAAT 121

BLAST of Cmc04g0120901 vs. NCBI nr
Match: CAB3485225.1 (unnamed protein product [Digitaria exilis])

HSP 1 Score: 97.8 bits (242), Expect = 6.7e-17
Identity = 50/88 (56.82%), Postives = 59/88 (67.05%), Query Frame = 0

Query: 8   GLLPQATSRISTPYAKTSVVFDAFPVRANSGEMYPIVPTTLVVCDIWSWSYNLARPKSLS 67
           G  P ATS +  P A TS   +AFPV  +SG MYP+VPTT VVC    WSY+ A PKS S
Sbjct: 107 GFRPHATSSMKAPKANTSDALEAFPVCPSSGAMYPMVPTTWVVCGSVPWSYSRASPKSPS 166

Query: 68  RAFMLISINILLGLTSRWITTCSHSSCK 96
           RAF+ +S + LL LTSR  TTCS SSC+
Sbjct: 167 RAFISLSSSTLLALTSRCTTTCSQSSCR 194

BLAST of Cmc04g0120901 vs. NCBI nr
Match: KAF6999610.1 (hypothetical protein CFC21_015615 [Triticum aestivum])

HSP 1 Score: 92.4 bits (228), Expect = 2.8e-15
Identity = 52/86 (60.47%), Postives = 58/86 (67.44%), Query Frame = 0

Query: 8   GLLPQATSRISTPYAKTSVVFDAFPVRANSGEMYPIVPTTLVVCDIWSWSYNLARPKSLS 67
           GL PQATSR +TP A TSV   AFPVR  SG  YP+VPTT VV     WSYNLARPKS S
Sbjct: 80  GLHPQATSRRNTPNANTSVKGVAFPVRIISGARYPMVPTTCVVLATVPWSYNLARPKSPS 139

Query: 68  RAFMLISINILLGLTSRWITTCSHSS 94
           R F+ +S + LL   SR +T  SHSS
Sbjct: 140 RPFICLSRSTLLAFISRCMTIFSHSS 165

BLAST of Cmc04g0120901 vs. NCBI nr
Match: TVU15103.1 (hypothetical protein EJB05_38605, partial [Eragrostis curvula])

HSP 1 Score: 85.9 bits (211), Expect = 2.6e-13
Identity = 45/81 (55.56%), Postives = 53/81 (65.43%), Query Frame = 0

Query: 4   SDSRGLLPQATSRISTPYAKTSVVFDAFPVRANSGEMYPIVPTTLVVCDIWSWSYNLARP 63
           S + G  P ATS +  P A TS   DAFPVR +SG MYP+VPTT VVC    WSY+ ARP
Sbjct: 85  SCTTGFRPHATSSMKAPNANTSDALDAFPVRPSSGAMYPMVPTTCVVCGSVPWSYSRARP 144

Query: 64  KSLSRAFMLISINILLGLTSR 85
           KS SRA + +S + LL L SR
Sbjct: 145 KSPSRALISLSSSTLLALMSR 165

BLAST of Cmc04g0120901 vs. ExPASy TrEMBL
Match: A0A453CFY2 (Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 7.0e-20
Identity = 57/109 (52.29%), Postives = 68/109 (62.39%), Query Frame = 0

Query: 4   SDSRGLLPQATSRISTPYAKTSVVFDAFPVRANSGEMYPIVPTTLVVCDIWSWSYNLARP 63
           S + G  P ATS +  P A TS   +AFPV  +SG  YP+VPTT VVC    WSY+ A P
Sbjct: 89  SCTTGFRPHATSSMKAPSANTSDALEAFPVCPSSGARYPMVPTTCVVCGSVPWSYSRASP 148

Query: 64  KSLSRAFMLISINILLGLTSRWITTCSHSSCKYNNPPATPLRMLILCSQ 113
           KS SR FM  S + LL L SR  TTCS SS +Y++P ATPL +  LC Q
Sbjct: 149 KSPSRPFMSASSSTLLALMSRCTTTCSQSSWRYSSPEATPLMIRNLCPQ 197

BLAST of Cmc04g0120901 vs. ExPASy TrEMBL
Match: A0A0A9PR97 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 9.1e-20
Identity = 56/101 (55.45%), Postives = 64/101 (63.37%), Query Frame = 0

Query: 17  ISTPYAKTSVVFDAFPVRANSGEMYPIVPTTLVVCDIWSWSYNLARPKSLSRAFMLISIN 76
           +  P A TS   DAFPV  +SG MYP+VPTT VVC    WSY+ A PKS SR F+ +S N
Sbjct: 1   MKAPNANTSDALDAFPVCPSSGAMYPMVPTTCVVCGSVPWSYSRASPKSPSRPFISLSSN 60

Query: 77  ILLGLTSRWITTCSHSSCKYNNPPATPLRMLILCSQFSTKL 118
            LL L SR  TTCS SS +Y+ P ATPL M  LC Q  T L
Sbjct: 61  TLLALMSRCTTTCSQSSWRYSKPEATPLMMRNLCPQLRTIL 101

BLAST of Cmc04g0120901 vs. ExPASy TrEMBL
Match: A0A0A9U247 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.6e-16
Identity = 52/99 (52.53%), Postives = 61/99 (61.62%), Query Frame = 0

Query: 8   GLLPQATSRISTPYAKTSVVFDAFPVRANSGEMYPIVPTTLVVCDIWSWSYNLARPKSLS 67
           G  P  TS  S P A TS    AFPVR +SG  YP VPTT VV  +   S++LA PKS S
Sbjct: 2   GRRPATTSNTSAPNANTSAAAVAFPVRVSSGARYPSVPTTRVVLGLAPRSWSLASPKSPS 61

Query: 68  RAFMLISINILLGLTSRWITTCSHSSCKYNNPPATPLRM 107
           RA M  S + LL  TSRW TTCSH SC+Y++  AT  R+
Sbjct: 62  RADMSASRSTLLAFTSRWRTTCSHPSCRYSSADATSRRI 100

BLAST of Cmc04g0120901 vs. ExPASy TrEMBL
Match: T1LCI7 (Uncharacterized protein OS=Triticum urartu OX=4572 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 4.7e-16
Identity = 52/86 (60.47%), Postives = 59/86 (68.60%), Query Frame = 0

Query: 8   GLLPQATSRISTPYAKTSVVFDAFPVRANSGEMYPIVPTTLVVCDIWSWSYNLARPKSLS 67
           GL PQATSR +TP A TSV   AFPVR  SG  YP+VPTT VV +   WSYNLARPKS S
Sbjct: 86  GLHPQATSRRNTPNANTSVKGVAFPVRIISGARYPMVPTTCVVLETVPWSYNLARPKSPS 145

Query: 68  RAFMLISINILLGLTSRWITTCSHSS 94
           R F+ +S + LL   SR +T  SHSS
Sbjct: 146 RPFICLSRSTLLAFISRCMTIFSHSS 171

BLAST of Cmc04g0120901 vs. ExPASy TrEMBL
Match: A0A3B6ASG0 (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.4e-15
Identity = 52/86 (60.47%), Postives = 58/86 (67.44%), Query Frame = 0

Query: 8   GLLPQATSRISTPYAKTSVVFDAFPVRANSGEMYPIVPTTLVVCDIWSWSYNLARPKSLS 67
           GL PQATSR +TP A TSV   AFPVR  SG  YP+VPTT VV     WSYNLARPKS S
Sbjct: 80  GLHPQATSRRNTPNANTSVKGVAFPVRIISGARYPMVPTTCVVLATVPWSYNLARPKSPS 139

Query: 68  RAFMLISINILLGLTSRWITTCSHSS 94
           R F+ +S + LL   SR +T  SHSS
Sbjct: 140 RPFICLSRSTLLAFISRCMTIFSHSS 165

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CAB3498045.19.3e-1961.54unnamed protein product [Digitaria exilis][more]
CAB3497643.17.9e-1856.84unnamed protein product [Digitaria exilis][more]
CAB3485225.16.7e-1756.82unnamed protein product [Digitaria exilis][more]
KAF6999610.12.8e-1560.47hypothetical protein CFC21_015615 [Triticum aestivum][more]
TVU15103.12.6e-1355.56hypothetical protein EJB05_38605, partial [Eragrostis curvula][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A453CFY27.0e-2052.29Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata... [more]
A0A0A9PR979.1e-2055.45Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A0A9U2471.6e-1652.53Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
T1LCI74.7e-1660.47Uncharacterized protein OS=Triticum urartu OX=4572 PE=4 SV=1[more]
A0A3B6ASG01.4e-1560.47Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0120901.1Cmc04g0120901.1mRNA