Homology
BLAST of Cmc04g0115401 vs. NCBI nr
Match:
XP_008442952.2 (PREDICTED: putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial [Cucumis melo])
HSP 1 Score: 2035.0 bits (5271), Expect = 0.0e+00
Identity = 1037/1045 (99.23%), Postives = 1040/1045 (99.52%), Query Frame = 0
Query: 1 MIPVRMRRYSNSTLDFLRFQLSQLQILRFSTLVRKRK--SSSSSSSGGIQKSQYPETADT 60
MIPVRMRRYSNSTLDFLRFQLSQLQILRFSTLVRKRK SSSSSSSGGIQKSQYPETADT
Sbjct: 1 MIPVRMRRYSNSTLDFLRFQLSQLQILRFSTLVRKRKSSSSSSSSSGGIQKSQYPETADT 60
Query: 61 SSSFRSLFNEITEILGSESCVRDKISFRDLGLKGSTEGDSLNGEEQLPCVPDGCKNAEQE 120
SSSFRSLFNEITEILGSESCVRDKISFRDLGLKGSTEGDSLNGEEQLPCVPD CKNAEQE
Sbjct: 61 SSSFRSLFNEITEILGSESCVRDKISFRDLGLKGSTEGDSLNGEEQLPCVPDVCKNAEQE 120
Query: 121 TEGAQLVVLEENDVSSVVHQITAVIRGGNGLVSMEERLGSLDVMFSSEIVEKVLKRCFKF 180
TEGAQLVVLEENDVSSVVHQITAVIRGGNGLVSMEERLGSLDVMFSSEIVEKVLKRCFKF
Sbjct: 121 TEGAQLVVLEENDVSSVVHQITAVIRGGNGLVSMEERLGSLDVMFSSEIVEKVLKRCFKF 180
Query: 181 PHLALGFFNWVKSRDGFQCTTNVFNTVLSIAGEARDLKLIDKLLEEMESYSLQKDIKTWT 240
PHLALGFFNWVKSRDGFQCTTNVFNTVLS+AGEARD KLIDKLLEEMESYSLQKDIKTWT
Sbjct: 181 PHLALGFFNWVKSRDGFQCTTNVFNTVLSVAGEARDFKLIDKLLEEMESYSLQKDIKTWT 240
Query: 241 ILISLYGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKK 300
ILISLYGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKK
Sbjct: 241 ILISLYGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKK 300
Query: 301 GISVVDMKMCKVLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKE 360
GISVVDMKMCKVLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKE
Sbjct: 301 GISVVDMKMCKVLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKE 360
Query: 361 ALEFIRDLNSKGIVLDTEYFEILVGGLCRANRIEDALELINIIKRKTDVDGKIYGIIINW 420
ALEFIRDLNSKGIVLDTEYFEILVGGLCRANRIEDALELINIIKRKTDVDGKIYGIIINW
Sbjct: 361 ALEFIRDLNSKGIVLDTEYFEILVGGLCRANRIEDALELINIIKRKTDVDGKIYGIIINW 420
Query: 421 YLRKNEVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEKGIELD 480
YLRKNEVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEKGIELD
Sbjct: 421 YLRKNEVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEKGIELD 480
Query: 481 TVAIMTVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFIWELFRISRTDEIVKVLNEMQ 540
TVAIMTVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFI ELFRISRTDEIVKVLNEMQ
Sbjct: 481 TVAIMTVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFIRELFRISRTDEIVKVLNEMQ 540
Query: 541 ELNIVIPDKLFRSVVSYMEKKGDVICLEKVKKMRSIVELFPQEGEINRENEAPKIKDISM 600
ELNIVIPDKLFRSVVSYMEKKGDVICLEKVKKMRSIVELFPQEGEINRENEAPKIKD+SM
Sbjct: 541 ELNIVIPDKLFRSVVSYMEKKGDVICLEKVKKMRSIVELFPQEGEINRENEAPKIKDLSM 600
Query: 601 EVNFKHSKPTSVPCHLETLPRNYREEDLDEIYKILSSSSDWKLIKKALENCSVEFSPELV 660
EVNFKHSKPTSVPCHLETLPRNYREEDLDEIYKILSSSSDWKLIKKALENCSVEFSPELV
Sbjct: 601 EVNFKHSKPTSVPCHLETLPRNYREEDLDEIYKILSSSSDWKLIKKALENCSVEFSPELV 660
Query: 661 IEILRKCSLDGCAAFHFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLFYEMRRR 720
IEILRKCSLDGCAAFHFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLFYEMRRR
Sbjct: 661 IEILRKCSLDGCAAFHFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLFYEMRRR 720
Query: 721 GCSITPYTWTIMIMQYARAGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVD 780
GCSITPYTWTIMIMQYARAGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVD
Sbjct: 721 GCSITPYTWTIMIMQYARAGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVD 780
Query: 781 ESITLFQEMIHSEYIPDKELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLIYSLYIR 840
ESITLFQEMIHSEYIPDKELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLIYSLYIR
Sbjct: 781 ESITLFQEMIHSEYIPDKELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLIYSLYIR 840
Query: 841 ALCRARKLDEALTLLQEVIGDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSMKQVGIN 900
ALCRARKLDEALTLLQEV+GDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSMKQVGIN
Sbjct: 841 ALCRARKLDEALTLLQEVVGDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSMKQVGIN 900
Query: 901 PTVHVYTSFIVYSFKEKQTRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVCEAWKV 960
PTVHVYTSFIVYSFKEKQTRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVCEAWKV
Sbjct: 901 PTVHVYTSFIVYSFKEKQTRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVCEAWKV 960
Query: 961 FNYMKKNGPSPDFKAYTMLISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRTVIFGLNR 1020
FNYMKKNGPSPDFKAYTMLISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRTVIFGLNR
Sbjct: 961 FNYMKKNGPSPDFKAYTMLISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRTVIFGLNR 1020
Query: 1021 EGKHVLARDVLQQKLGLIRRRKFQI 1044
EGKHVLARDVLQQKLGLIRRRKFQI
Sbjct: 1021 EGKHVLARDVLQQKLGLIRRRKFQI 1045
BLAST of Cmc04g0115401 vs. NCBI nr
Match:
KAA0043791.1 (putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK25343.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 2025.8 bits (5247), Expect = 0.0e+00
Identity = 1032/1040 (99.23%), Postives = 1035/1040 (99.52%), Query Frame = 0
Query: 6 MRRYSNSTLDFLRFQLSQLQILRFSTLVRKRK--SSSSSSSGGIQKSQYPETADTSSSFR 65
MRRYSNSTLDFLRFQLSQLQILRFSTLVRKRK SSSSSSSGGIQKSQYPETADTSSSFR
Sbjct: 1 MRRYSNSTLDFLRFQLSQLQILRFSTLVRKRKSSSSSSSSSGGIQKSQYPETADTSSSFR 60
Query: 66 SLFNEITEILGSESCVRDKISFRDLGLKGSTEGDSLNGEEQLPCVPDGCKNAEQETEGAQ 125
SLFNEITEILGSESCVRDKISFRDLGLKGSTEGDSLNGEEQLPCVPD CKNAEQETEGAQ
Sbjct: 61 SLFNEITEILGSESCVRDKISFRDLGLKGSTEGDSLNGEEQLPCVPDVCKNAEQETEGAQ 120
Query: 126 LVVLEENDVSSVVHQITAVIRGGNGLVSMEERLGSLDVMFSSEIVEKVLKRCFKFPHLAL 185
LVVLEENDVSSVVHQITAVIRGGNGLVSMEERLGSLDVMFSSEIVEKVLKRCFKFPHLAL
Sbjct: 121 LVVLEENDVSSVVHQITAVIRGGNGLVSMEERLGSLDVMFSSEIVEKVLKRCFKFPHLAL 180
Query: 186 GFFNWVKSRDGFQCTTNVFNTVLSIAGEARDLKLIDKLLEEMESYSLQKDIKTWTILISL 245
GFFNWVKSRDGFQCTTNVFNTVLS+AGEARD KLIDKLLEEMESYSLQKDIKTWTILISL
Sbjct: 181 GFFNWVKSRDGFQCTTNVFNTVLSVAGEARDFKLIDKLLEEMESYSLQKDIKTWTILISL 240
Query: 246 YGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKKGISVV 305
YGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKKGISVV
Sbjct: 241 YGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKKGISVV 300
Query: 306 DMKMCKVLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKEALEFI 365
DMKMCKVLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKEALEFI
Sbjct: 301 DMKMCKVLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKEALEFI 360
Query: 366 RDLNSKGIVLDTEYFEILVGGLCRANRIEDALELINIIKRKTDVDGKIYGIIINWYLRKN 425
RDLNSKGIVLDTEYFEILVGGLCRANRIEDALELINIIKRKTDVDGKIYGIIINWYLRKN
Sbjct: 361 RDLNSKGIVLDTEYFEILVGGLCRANRIEDALELINIIKRKTDVDGKIYGIIINWYLRKN 420
Query: 426 EVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEKGIELDTVAIM 485
EVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEKGIELDTVAIM
Sbjct: 421 EVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEKGIELDTVAIM 480
Query: 486 TVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFIWELFRISRTDEIVKVLNEMQELNIV 545
TVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFI ELFRISRTDEIVKVLNEMQELNIV
Sbjct: 481 TVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFIRELFRISRTDEIVKVLNEMQELNIV 540
Query: 546 IPDKLFRSVVSYMEKKGDVICLEKVKKMRSIVELFPQEGEINRENEAPKIKDISMEVNFK 605
IPDKLFRSVVSYMEKKGDVICLEKVKKMRSIVELFPQEGEINRENEAPKIKD+SMEVNFK
Sbjct: 541 IPDKLFRSVVSYMEKKGDVICLEKVKKMRSIVELFPQEGEINRENEAPKIKDLSMEVNFK 600
Query: 606 HSKPTSVPCHLETLPRNYREEDLDEIYKILSSSSDWKLIKKALENCSVEFSPELVIEILR 665
HSKPTSVPCHLETLPRNYREEDLDEIYKILSSSSDWKLIKKALENCSVEFSPELVIEILR
Sbjct: 601 HSKPTSVPCHLETLPRNYREEDLDEIYKILSSSSDWKLIKKALENCSVEFSPELVIEILR 660
Query: 666 KCSLDGCAAFHFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLFYEMRRRGCSIT 725
KCSLDGCAAFHFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLFYEMRRRGCSIT
Sbjct: 661 KCSLDGCAAFHFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLFYEMRRRGCSIT 720
Query: 726 PYTWTIMIMQYARAGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVDESITL 785
PYTWTIMIMQYARAGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVDESITL
Sbjct: 721 PYTWTIMIMQYARAGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVDESITL 780
Query: 786 FQEMIHSEYIPDKELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLIYSLYIRALCRA 845
FQEMIHSEYIPDKELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLIYSLYIRALCRA
Sbjct: 781 FQEMIHSEYIPDKELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLIYSLYIRALCRA 840
Query: 846 RKLDEALTLLQEVIGDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSMKQVGINPTVHV 905
RKLDEALTLLQEV+GDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSMKQVGINPTVHV
Sbjct: 841 RKLDEALTLLQEVVGDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSMKQVGINPTVHV 900
Query: 906 YTSFIVYSFKEKQTRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVCEAWKVFNYMK 965
YTSFIVYSFKEKQTRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVCEAWKVFNYMK
Sbjct: 901 YTSFIVYSFKEKQTRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVCEAWKVFNYMK 960
Query: 966 KNGPSPDFKAYTMLISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRTVIFGLNREGKHV 1025
KNGPSPDFKAYTMLISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRTVIFGLNREGKHV
Sbjct: 961 KNGPSPDFKAYTMLISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRTVIFGLNREGKHV 1020
Query: 1026 LARDVLQQKLGLIRRRKFQI 1044
LARDVLQQKLGLIRRRKFQI
Sbjct: 1021 LARDVLQQKLGLIRRRKFQI 1040
BLAST of Cmc04g0115401 vs. NCBI nr
Match:
XP_004136721.2 (putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial [Cucumis sativus] >KAE8651118.1 hypothetical protein Csa_001007 [Cucumis sativus])
HSP 1 Score: 1921.7 bits (4977), Expect = 0.0e+00
Identity = 980/1052 (93.16%), Postives = 1006/1052 (95.63%), Query Frame = 0
Query: 1 MIPVRMRR-------YSNSTLDFLRFQLSQLQILRFSTLVRKRK--SSSSSSSGGIQKSQ 60
MIPVRMRR YSNSTL+F LRFST +RKRK SSSSSSSGG QKSQ
Sbjct: 1 MIPVRMRRLIRLRSPYSNSTLNF----------LRFSTFIRKRKGSSSSSSSSGGTQKSQ 60
Query: 61 YPETADTSSSFRSLFNEITEILGSESCVRDKISFRDLGLKGSTEGDSLNGEEQLPCVPDG 120
YPE D SSSFRSLFNEITEILGSESCV DKISFRDLGLKGS EG+ LNGEE LP PD
Sbjct: 61 YPEAVDASSSFRSLFNEITEILGSESCVHDKISFRDLGLKGSPEGEFLNGEEHLPGAPDV 120
Query: 121 CKNAEQETEGAQLVVLEENDVSSVVHQITAVIRGGNGLVSMEERLGSLDVMFSSEIVEKV 180
CKNAEQETEG QLVVLEENDVSSVVH+ITAVIRGGNGLVSMEERLG+LDVMFSSEIVEKV
Sbjct: 121 CKNAEQETEGTQLVVLEENDVSSVVHEITAVIRGGNGLVSMEERLGNLDVMFSSEIVEKV 180
Query: 181 LKRCFKFPHLALGFFNWVKSRDGFQCTTNVFNTVLSIAGEARDLKLIDKLLEEMESYSLQ 240
LKRCFKFPHLALGFFNWVKSRDGFQCTTNVFNTVLSIAGEARD KLIDKLLEEMESYSL
Sbjct: 181 LKRCFKFPHLALGFFNWVKSRDGFQCTTNVFNTVLSIAGEARDFKLIDKLLEEMESYSLL 240
Query: 241 KDIKTWTILISLYGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEF 300
KDIKTWTILISLYGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEF
Sbjct: 241 KDIKTWTILISLYGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEF 300
Query: 301 YQEMAKKGISVVDMKMCKVLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFC 360
YQEMAKKGISVVDMKMCK+LLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFC
Sbjct: 301 YQEMAKKGISVVDMKMCKMLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFC 360
Query: 361 ISRRIKEALEFIRDLNSKGIVLDTEYFEILVGGLCRANRIEDALELINIIKRKTDVDGKI 420
ISRRIKEALEFIRDLNSKGIVLD+EYFEIL+GGLCRANRIEDALELINIIKRK DVDGKI
Sbjct: 361 ISRRIKEALEFIRDLNSKGIVLDSEYFEILIGGLCRANRIEDALELINIIKRKGDVDGKI 420
Query: 421 YGIIINWYLRKNEVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEML 480
YGIIINWYLRKNEVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEML
Sbjct: 421 YGIIINWYLRKNEVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEML 480
Query: 481 EKGIELDTVAIMTVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFIWELFRISRTDEIV 540
EKGIELDTVAIMTVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFI ELFRISRTDEIV
Sbjct: 481 EKGIELDTVAIMTVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFIRELFRISRTDEIV 540
Query: 541 KVLNEMQELNIVIPDKLFRSVVSYMEKKGDVICLEKVKKMRSIVELFPQEGEINRENEAP 600
KVLNEMQELNIVIPDKLFRSVVSYMEK GDVICLEKVKKM+SIVELFPQE EINREN+AP
Sbjct: 541 KVLNEMQELNIVIPDKLFRSVVSYMEKNGDVICLEKVKKMKSIVELFPQEDEINRENDAP 600
Query: 601 KIKDISMEVNFKHSKPTSVPCHLETLPRNYREEDLDEIYKILSSSSDWKLIKKALENCSV 660
IKD+ MEVNFKHSKPTSV CHLETLPRNYREEDLD IYKILSSS+DWKLIKKALENCSV
Sbjct: 601 TIKDLGMEVNFKHSKPTSVTCHLETLPRNYREEDLDAIYKILSSSTDWKLIKKALENCSV 660
Query: 661 EFSPELVIEILRKCSLDGCAAFHFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSL 720
EFSPELVIEILRKCSLDGCAAF+FFAWVGKQPGYNHTTETYNMAIK+AGLGKDFKHMRSL
Sbjct: 661 EFSPELVIEILRKCSLDGCAAFNFFAWVGKQPGYNHTTETYNMAIKIAGLGKDFKHMRSL 720
Query: 721 FYEMRRRGCSITPYTWTIMIMQYARAGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCE 780
FYEMRRRGCSITPYTWTIMIMQYARAGLTEIALKS+EEMKE NIKPNANTYKYLIMSLCE
Sbjct: 721 FYEMRRRGCSITPYTWTIMIMQYARAGLTEIALKSYEEMKEINIKPNANTYKYLIMSLCE 780
Query: 781 SKRMKVDESITLFQEMIHSEYIPDKELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPL 840
SKR KVDE+ITLFQEMIHS+YIPDKELLETYLGCLCKLSRLSDA++CIDHLRKVGFSIPL
Sbjct: 781 SKRRKVDEAITLFQEMIHSKYIPDKELLETYLGCLCKLSRLSDAKKCIDHLRKVGFSIPL 840
Query: 841 IYSLYIRALCRARKLDEALTLLQEVIGDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNS 900
YSLYIRALCRARKLDEALTLL+EV+GDERSKLDSYIYGSLV+GLLQTGRTEEALAKMNS
Sbjct: 841 TYSLYIRALCRARKLDEALTLLEEVVGDERSKLDSYIYGSLVYGLLQTGRTEEALAKMNS 900
Query: 901 MKQVGINPTVHVYTSFIVYSFKEKQTRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGK 960
MKQVGINPTVHVYTSFIVYSFKEKQTRRALEILAKMLQEGCEPS+ATYSAIVHGYMNMGK
Sbjct: 901 MKQVGINPTVHVYTSFIVYSFKEKQTRRALEILAKMLQEGCEPSIATYSAIVHGYMNMGK 960
Query: 961 VCEAWKVFNYMKKNGPSPDFKAYTMLISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRT 1020
VCEAWKVFNYMKK GPSPDFKAYTMLISCLCKAGRSEEALEI+S+MLNNGIAPSS+NFRT
Sbjct: 961 VCEAWKVFNYMKKYGPSPDFKAYTMLISCLCKAGRSEEALEIISDMLNNGIAPSSINFRT 1020
Query: 1021 VIFGLNREGKHVLARDVLQQKLGLIRRRKFQI 1044
VIFGLNREGKHVLARDVLQQKLGLIRRRKFQI
Sbjct: 1021 VIFGLNREGKHVLARDVLQQKLGLIRRRKFQI 1042
BLAST of Cmc04g0115401 vs. NCBI nr
Match:
XP_038903598.1 (putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial [Benincasa hispida])
HSP 1 Score: 1789.6 bits (4634), Expect = 0.0e+00
Identity = 909/1034 (87.91%), Postives = 963/1034 (93.13%), Query Frame = 0
Query: 9 YSNSTLDFLRFQLSQLQILRFSTLVRKRKSSSSSSSGGIQKSQYPETADTSSSFRSLFNE 68
YSNSTLDFLRF LSQ Q+LRFSTLVRKRKSSS + G Q+SQYPETADT SSFRSLFNE
Sbjct: 11 YSNSTLDFLRFHLSQFQVLRFSTLVRKRKSSSRPA--GTQESQYPETADT-SSFRSLFNE 70
Query: 69 ITEILGSESCVRDKISFRDLGLKGSTEGDSLNGEEQLPCVPDGCKNAEQETEGAQLVVLE 128
ITEILGSES V DKISFRDL LK S E DSLNG+EQL C CKN+E+ETE QLVVLE
Sbjct: 71 ITEILGSESYVHDKISFRDLELKESQERDSLNGKEQLLCASGVCKNSEEETESTQLVVLE 130
Query: 129 ENDVSSVVHQITAVIRGGNGLVSMEERLGSLDVMFSSEIVEKVLKRCFKFPHLALGFFNW 188
E DVSSVVHQI AVIR GNGL+SMEERLGSLDV FSSE+VEKVLKRCFKF HLALGFFNW
Sbjct: 131 EKDVSSVVHQIAAVIRAGNGLISMEERLGSLDVRFSSEVVEKVLKRCFKFQHLALGFFNW 190
Query: 189 VKSRDGFQCTTNVFNTVLSIAGEARDLKLIDKLLEEMESYSLQKDIKTWTILISLYGNAK 248
VKSRD FQCTT+V NT+LSIA EARD KLI+KL+EEME+YSL+KDIKTWTILISLYGNAK
Sbjct: 191 VKSRDEFQCTTSVLNTMLSIASEARDFKLIEKLVEEMENYSLKKDIKTWTILISLYGNAK 250
Query: 249 LTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKKGISVVDMKMC 308
LTGK+LMVY+KM+ESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEM KKGI+VVDMKMC
Sbjct: 251 LTGKALMVYNKMRESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMVKKGITVVDMKMC 310
Query: 309 KVLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKEALEFIRDLNS 368
KVLLS LAGSGDTASVLDIAKDMVALFNV ERD YHYILKSFCIS RIKEALEFI DLNS
Sbjct: 311 KVLLSCLAGSGDTASVLDIAKDMVALFNVPERDAYHYILKSFCISGRIKEALEFIHDLNS 370
Query: 369 KGIVLDTEYFEILVGGLCRANRIEDALELINIIKRKTDVDGKIYGIIINWYLRKNEVSKA 428
KGIVLD EYFEILVGGLCRANR+EDALEL+NI+KRK D DGKIYGIIINWYLR+N+V KA
Sbjct: 371 KGIVLDPEYFEILVGGLCRANRLEDALELVNIMKRKIDGDGKIYGIIINWYLRRNDVLKA 430
Query: 429 LDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEKGIELDTVAIMTVVVG 488
LDLFQNMKEMGY PTTSTYTQLMQHLF LAEYEKGFELYKEM EKG+ELD VAIMTVVVG
Sbjct: 431 LDLFQNMKEMGYLPTTSTYTQLMQHLFRLAEYEKGFELYKEMQEKGVELDAVAIMTVVVG 490
Query: 489 NVRQNRITEAWNVFRTMENKPTWKSCSVFIWELFRISRTDEIVKVLNEMQELNIVIPDKL 548
NVRQNRITEAWNVFRTMENKPTWKSCSVFI ELFRISRTDEIVKVLNEMQELN VIPDKL
Sbjct: 491 NVRQNRITEAWNVFRTMENKPTWKSCSVFIRELFRISRTDEIVKVLNEMQELNTVIPDKL 550
Query: 549 FRSVVSYMEKKGDVICLEKVKKMRSIVELFPQEGEINRENEAPKIKDISMEVNFKHSKPT 608
FRSVVSYMEK GDVI LEKVKKMRSIVELFPQEGE+NRE++A KIKD+S+EVNFKHSKPT
Sbjct: 551 FRSVVSYMEKGGDVISLEKVKKMRSIVELFPQEGEVNREDDAHKIKDLSIEVNFKHSKPT 610
Query: 609 SVPCHLETLPRNYREEDLDEIYKILSSSSDWKLIKKALENCSVEFSPELVIEILRKCSLD 668
S+ CH+ETLPRNYREEDLDEI+KILSSS+DWK IKKALENC VEF+PELV+E LRKCSLD
Sbjct: 611 SITCHMETLPRNYREEDLDEIFKILSSSTDWKQIKKALENCGVEFTPELVLETLRKCSLD 670
Query: 669 GCAAFHFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLFYEMRRRGCSITPYTWT 728
GCAA HFFAWVGKQPGYNHTTETYNMAIKVAG+GKDFKHMRSLFYEMRRRGC ITP TWT
Sbjct: 671 GCAALHFFAWVGKQPGYNHTTETYNMAIKVAGIGKDFKHMRSLFYEMRRRGCLITPDTWT 730
Query: 729 IMIMQYARAGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVDESITLFQEMI 788
IMIMQY RAGLTEIALKSF+EMKESNIKPNA TYKYLIM+LC KR KVDE+ITLFQEMI
Sbjct: 731 IMIMQYGRAGLTEIALKSFKEMKESNIKPNATTYKYLIMTLCGLKRRKVDEAITLFQEMI 790
Query: 789 HSEYIPDKELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLIYSLYIRALCRARKLDE 848
SEYIPDKELLETYLGCLCK SRLSDA+ CIDHLRKVGF+IPLIYSLYIRALCRARKLDE
Sbjct: 791 RSEYIPDKELLETYLGCLCKHSRLSDAKGCIDHLRKVGFTIPLIYSLYIRALCRARKLDE 850
Query: 849 ALTLLQEVIGDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSMKQVGINPTVHVYTSFI 908
ALTLL+EV G ERSKLDSYIYGSL+HGLLQTGRT+EALAKMNSMKQVGINPTVHVYTSFI
Sbjct: 851 ALTLLEEV-GAERSKLDSYIYGSLIHGLLQTGRTKEALAKMNSMKQVGINPTVHVYTSFI 910
Query: 909 VYSFKEKQTRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVCEAWKVFNYMKKNGPS 968
VYSFKEKQTRRALEILAKMLQEGCEP++ATYSA+VHGYMNM EAWKVFNY+K+NGPS
Sbjct: 911 VYSFKEKQTRRALEILAKMLQEGCEPTIATYSALVHGYMNMRNFGEAWKVFNYIKRNGPS 970
Query: 969 PDFKAYTMLISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRTVIFGLNREGKHVLARDV 1028
PDFKAYTMLISCLCKAGRSEEAL+I+SEML++GIAPSSVNFRTV FGLNREGKH+LARDV
Sbjct: 971 PDFKAYTMLISCLCKAGRSEEALQIISEMLDSGIAPSSVNFRTVFFGLNREGKHILARDV 1030
Query: 1029 LQQKLGLIRRRKFQ 1043
LQQKLGLIRRRKFQ
Sbjct: 1031 LQQKLGLIRRRKFQ 1040
BLAST of Cmc04g0115401 vs. NCBI nr
Match:
XP_023528126.1 (putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1735.3 bits (4493), Expect = 0.0e+00
Identity = 879/1050 (83.71%), Postives = 960/1050 (91.43%), Query Frame = 0
Query: 1 MIPVRMRR-------YSNSTLDFLRFQLSQLQILRFSTLVRKRKSSSSSSSGGIQKSQYP 60
MI VRMR+ YSNSTL+FLRF LSQ Q+LRFSTL RKR SSS SGG Q+SQ P
Sbjct: 1 MIIVRMRKLIRFQSPYSNSTLNFLRFHLSQFQVLRFSTLARKR--ISSSRSGGTQESQCP 60
Query: 61 ETADTSSSFRSLFNEITEILGSESCVRDKISFRDLGLKGSTEGDSLNGEEQLPCVPDGCK 120
ETA T SSFRSLFNEITEILGSES V DKIS RDLGLK S DSLNGEEQL C CK
Sbjct: 61 ETAAT-SSFRSLFNEITEILGSESYVHDKISSRDLGLKESAAEDSLNGEEQLLCAQGVCK 120
Query: 121 NAEQETEGAQLVVLEENDVSSVVHQITAVIRGGNGLVSMEERLGSLDVMFSSEIVEKVLK 180
NAEQETEG QLVVLEENDVSSVVHQ+ A +RGGNGLVSMEERLGSLDV FSSE+VEKVLK
Sbjct: 121 NAEQETEGIQLVVLEENDVSSVVHQVAAAVRGGNGLVSMEERLGSLDVRFSSEVVEKVLK 180
Query: 181 RCFKFPHLALGFFNWVKSRDGFQCTTNVFNTVLSIAGEARDLKLIDKLLEEMESYSLQKD 240
RCFKFPHLALGFFNWVKSRDGFQCTT+V N VLSIAGEARD KL++KL+EEME +SLQKD
Sbjct: 181 RCFKFPHLALGFFNWVKSRDGFQCTTSVINIVLSIAGEARDFKLVEKLVEEMEYHSLQKD 240
Query: 241 IKTWTILISLYGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQ 300
IKTWTILISLYGNAKLTGK+LMVYSKM+ESGCE DGVVYKTLICSLSAAGKPELAMEFY+
Sbjct: 241 IKTWTILISLYGNAKLTGKALMVYSKMRESGCEIDGVVYKTLICSLSAAGKPELAMEFYR 300
Query: 301 EMAKKGISVVDMKMCKVLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCIS 360
EM K+GISVVDMKM KVLLS AGSGDTASVLDIAKDMVALF VQE DVYHYILKSFCIS
Sbjct: 301 EMVKQGISVVDMKMSKVLLSCFAGSGDTASVLDIAKDMVALFKVQEHDVYHYILKSFCIS 360
Query: 361 RRIKEALEFIRDLNSKGIVLDTEYFEILVGGLCRANRIEDALELINIIKRKTDVDGKIYG 420
+RIKEAL+FI DLNSKGIVLD +YFEILVGGLCR+NRIEDALEL+NI+KRKT +DGK+YG
Sbjct: 361 KRIKEALKFIHDLNSKGIVLDPKYFEILVGGLCRSNRIEDALELVNIMKRKTVLDGKVYG 420
Query: 421 IIINWYLRKNEVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEK 480
IIINWYLR+N++ KALDLFQNMKE+GY PTTSTYTQLMQHLF LA+YEKGFELYKEMLEK
Sbjct: 421 IIINWYLRQNDILKALDLFQNMKEIGYLPTTSTYTQLMQHLFRLAKYEKGFELYKEMLEK 480
Query: 481 GIELDTVAIMTVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFIWELFRISRTDEIVKV 540
GIELDTVAIMTVV G+V QN I+EAW+VFRTMENKPTWKS SVFI ELFRISRTDE+VKV
Sbjct: 481 GIELDTVAIMTVVAGHVSQNHISEAWSVFRTMENKPTWKSFSVFIRELFRISRTDEVVKV 540
Query: 541 LNEMQELNIVIPDKLFRSVVSYMEKKGDVICLEKVKKMRSIVELFPQEGEINRENEAPKI 600
LNEM ELNIV+PDKLFRSVVSYMEK GD+I LEKVKKM+S VELFPQE E+NRE++APKI
Sbjct: 541 LNEMHELNIVVPDKLFRSVVSYMEKMGDMISLEKVKKMKSKVELFPQECEVNREDDAPKI 600
Query: 601 KDISMEVNFKHSKPTSVPCHLETLPRNYREEDLDEIYKILSSSSDWKLIKKALENCSVEF 660
D+ MEVNF+HSKPTS+ CH ETLPRNYREEDLDE+Y+ILSSS+DWK IKKALENCS+EF
Sbjct: 601 NDLRMEVNFEHSKPTSITCHTETLPRNYREEDLDEVYRILSSSTDWKQIKKALENCSIEF 660
Query: 661 SPELVIEILRKCSLDGCAAFHFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLFY 720
+ E V+EILRKCSLDGCAA FFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSL+Y
Sbjct: 661 TTEFVLEILRKCSLDGCAALQFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLYY 720
Query: 721 EMRRRGCSITPYTWTIMIMQYARAGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCESK 780
EMRR+GC ITP TWTIMIMQY RAGLTEIALKSFEEMK+S IKPNANTYKYLIMSLC SK
Sbjct: 721 EMRRKGCLITPDTWTIMIMQYGRAGLTEIALKSFEEMKQSKIKPNANTYKYLIMSLCGSK 780
Query: 781 RMKVDESITLFQEMIHSEYIPDKELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLIY 840
R KV+E+ITL QEMIHS+YIPDKELLETYLGCLCKL RLSDA+RCID+LR VGF++PLIY
Sbjct: 781 RRKVNEAITLLQEMIHSKYIPDKELLETYLGCLCKLDRLSDAKRCIDNLRNVGFTVPLIY 840
Query: 841 SLYIRALCRARKLDEALTLLQEVIGDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSMK 900
SLYIRALCR KLDEALTLL+EV G ERSKLD+YIYGS++HGLLQ GRT+EALAKMN+MK
Sbjct: 841 SLYIRALCRVGKLDEALTLLEEV-GTERSKLDNYIYGSIIHGLLQRGRTDEALAKMNAMK 900
Query: 901 QVGINPTVHVYTSFIVYSFKEKQTRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVC 960
QVGINPTVHVYTSFIV+SFKE QTRRALEILAKMLQEGCEP++ATYSA+++GYMNMGK
Sbjct: 901 QVGINPTVHVYTSFIVHSFKENQTRRALEILAKMLQEGCEPTIATYSAVIYGYMNMGKFG 960
Query: 961 EAWKVFNYMKKNGPSPDFKAYTMLISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRTVI 1020
EAWKVF+Y+KKNGPSPDFKAY+MLISCLC+AGRSEEAL I+S+ML++GIAPSS+NFRTV
Sbjct: 961 EAWKVFHYIKKNGPSPDFKAYSMLISCLCEAGRSEEALRIVSDMLDSGIAPSSINFRTVF 1020
Query: 1021 FGLNREGKHVLARDVLQQKLGLIRRRKFQI 1044
FGLNREGKH+LARDVLQQKLGLIRRRKF+I
Sbjct: 1021 FGLNREGKHILARDVLQQKLGLIRRRKFKI 1046
BLAST of Cmc04g0115401 vs. ExPASy Swiss-Prot
Match:
Q9FNG8 (Putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g06400 PE=3 SV=1)
HSP 1 Score: 964.1 bits (2491), Expect = 1.2e-279
Identity = 514/1023 (50.24%), Postives = 697/1023 (68.13%), Query Frame = 0
Query: 25 QILRFSTLVRKRKSSSSSSSGGIQKSQYPETADTSSSFRSLFNEITEILGSESCVRDKIS 84
Q++ FS + KS+ + + K Q TA T SLFNEITEILG++ D+ +
Sbjct: 20 QLVSFSGFSKSSKSNKTRETTTTSKIQAEATAIT-----SLFNEITEILGTDVVKLDETT 79
Query: 85 FRDLGLKGSTEGDSLNGEEQLPCVPDGCKNAEQ----ETEGAQLVVLEENDVSSVVHQIT 144
L+ G + + C +NA E E AQ V+ EE D S VVH+IT
Sbjct: 80 ----RLRSHVSGAVSDNGVSVSCTEGVRQNAAMGFSGEDEKAQKVLHEEVDFSPVVHEIT 139
Query: 145 AVIRGGNGLVSMEERLGSLDVMFSSEIVEKVLKRCFKFPHLALGFFNWVKSRDGFQCTTN 204
+V+RG + LVSME+RL L F EIVE VLKRCFK PHLA+ FFNWVK +DGF
Sbjct: 140 SVVRGDDVLVSMEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVG 199
Query: 205 VFNTVLSIAGEARDLKLIDKLLEEMESYSLQKDIKTWTILISLYGNAKLTGKSLMVYSKM 264
++NT+LSIAGEAR+L ++D+L+ EME KDI+TWTILIS+YG AK GK L+V+ KM
Sbjct: 200 IYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKM 259
Query: 265 KESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKKGISVVDMKMCKVLLSSLAGSGD 324
++SG E D Y +I SL AG+ +LA+EFY+EM +KGI+ ++ K+LL +A S
Sbjct: 260 RKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGIT-FGLRTYKMLLDCIAKSEK 319
Query: 325 TASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKEALEFIRDLNSKGIVLDTEYFEI 384
V IA DMV + + E D + Y+LKSFC+S +IKEALE IR+L +K + LD +YFEI
Sbjct: 320 VDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEI 379
Query: 385 LVGGLCRANRIEDALELINIIKRKTDVDGKIYGIIINWYLRKNEVSKALDLFQNMKEMGY 444
LV GLCRANR+ DALE+++I+KR+ D +YGIII+ YLR+N+VSKAL+ F+ +K+ G
Sbjct: 380 LVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGR 439
Query: 445 FPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEKGIELDTVAIMTVVVGNVRQNRITEAWN 504
P STYT++MQHLF L ++EKG L+ EM+E GIE D+VAI VV G++ QNR+ EAW
Sbjct: 440 PPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWK 499
Query: 505 VFRTMEN---KPTWKSCSVFIWELFRISRTDEIVKVLNEMQELNIVIPDKLFRSVVSYME 564
VF +ME KPTWKS S+F+ EL R SR DEI+K+ N+M IVI D +F V+S ME
Sbjct: 500 VFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSME 559
Query: 565 KKGDVICLEKVKKMRSIVELFPQEGEINRENEAPKIKDISMEVNFKH-SKPTSVPCHLET 624
K G+ + +K+++ + E + + E + +++ + N + +++P L
Sbjct: 560 KNGEKEKIHLIKEIQKRSNSYCDELNGSGKAEFSQEEELVDDYNCPQLVQQSALPPALSA 619
Query: 625 LPRNYREEDLDEIYKILSSSSDWKLIKKALENCSVEFSPELVIEILRKCSLDGCAAFHFF 684
+ + D+ EI ++LSSS DW+ ++ALE +V+F+PELV+E+LR + G A FF
Sbjct: 620 VDK----MDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFF 679
Query: 685 AWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLFYEMRRRGCSITPYTWTIMIMQYAR 744
+WVGK+ GY H +E YNM+IKVAG GKDFK MRSLFYEMRR+GC IT TW IMIMQY R
Sbjct: 680 SWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGR 739
Query: 745 AGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVDESITLFQEMIHSEYIPDK 804
GLT IA+++F+EMK+ + P+++T+K LI LCE K V+E+ F+EMI S ++PD+
Sbjct: 740 TGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDR 799
Query: 805 ELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLIYSLYIRALCRARKLDEALTLLQEV 864
EL++ YLGCLC++ DA+ C+D L K+GF + + YS+YIRALCR KL+EAL+ L
Sbjct: 800 ELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASF 859
Query: 865 IGDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSMKQVGINPTVHVYTSFIVYSFKEKQ 924
G ERS LD Y YGS+VHGLLQ G ++AL K+NSMK++G P VHVYTS IVY FKEKQ
Sbjct: 860 EG-ERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQ 919
Query: 925 TRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVCEAWKVFNYMKKNGPSPDFKAYTM 984
+ LE KM E CEPS+ TY+A++ GYM++GKV EAW F M++ G SPDFK Y+
Sbjct: 920 LEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSK 979
Query: 985 LISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRTVIFGLNREGKHVLARDVLQQKLGLI 1040
I+CLC+A +SE+AL++LSEML+ GIAPS++NFRTV +GLNREGKH LAR LQ+K L+
Sbjct: 980 FINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQKKSALV 1027
BLAST of Cmc04g0115401 vs. ExPASy Swiss-Prot
Match:
Q9SZ52 (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR3 PE=1 SV=1)
HSP 1 Score: 209.9 bits (533), Expect = 1.4e-52
Identity = 208/883 (23.56%), Postives = 380/883 (43.04%), Query Frame = 0
Query: 193 DGFQCTTNVFNTVLSIAGEARDLKLIDKLLEEMESYSLQKDIKTWTILISLYGNAKLTGK 252
+GF+ + +++++ G+ RD+ + LL+EME+ L+ ++ T+TI I + G A +
Sbjct: 217 EGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE 276
Query: 253 SLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKKGISVVDMKMCKVLL 312
+ + +M + GC PD V Y LI +L A K + A E +++M K G D LL
Sbjct: 277 AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM-KTGRHKPDRVTYITLL 336
Query: 313 SSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKEALEFIRDLNSKGIV 372
+ + D SV +M +V + + ++ + C + EA + + + +GI+
Sbjct: 337 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 396
Query: 373 LDTEYFEILVGGLCRANRIEDALELI-NIIKRKTDVDGKIYGIIINWYLRKNEVSKALDL 432
+ + L+ GL R +R++DALEL N+ Y + I++Y + + AL+
Sbjct: 397 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 456
Query: 433 FQNM-----------------------------------KEMGYFPTTSTYTQLMQHLFS 492
F+ M K++G P + TY +M+
Sbjct: 457 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 516
Query: 493 LAEYEKGFELYKEMLEKGIELDTVAIMTVVVGNVRQNRITEAWNVF---RTMENKPTWKS 552
+ E ++ +L EM+E G E D + + +++ + +R+ EAW +F + M+ KPT +
Sbjct: 517 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 576
Query: 553 CSVFIWELFRISRTDEIVKVLNEMQEL----NIVIPDKLFRSVVSYMEKKGDVICLEKVK 612
+ + L + + E +++ M + N + + LF + E + L K+
Sbjct: 577 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 636
Query: 613 KMRSIVELFPQEGEINRENEAPKIKDISMEVNFKHSKPTSVPCHLETLPRNYREEDLDEI 672
M + ++F I + ++K+ + F H V TL L +
Sbjct: 637 DMGCVPDVFTYNTIIFGLVKNGQVKE---AMCFFHQMKKLVYPDFVTLCTL-----LPGV 696
Query: 673 YKILSSSSDWKLIKKALENCSVE----FSPELVIEILRKCSLDGCAAFHFFAWVGKQPGY 732
K +K+I L NC+ + F +L+ IL + +D +F ++
Sbjct: 697 VKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSF------SERLVA 756
Query: 733 NHTTETYNMAIKVAGLGKDFKH-----MRSLFYEMRRRGCSITPY--TWTIMIMQYARAG 792
N + +I V + KH R+LF E + + P T+ ++I A
Sbjct: 757 NGICRDGD-SILVPIIRYSCKHNNVSGARTLF-EKFTKDLGVQPKLPTYNLLIGGLLEAD 816
Query: 793 LTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVDESITLFQEMIHSEYIPDKEL 852
+ EIA F ++K + P+ TY +L+ + K K+DE L++EM E
Sbjct: 817 MIEIAQDVFLQVKSTGCIPDVATYNFLLDAY--GKSGKIDELFELYKEMSTHE------- 876
Query: 853 LETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLIYSLYIRALCRARKLDEALTLLQEVIG 912
C+ + ++ +++ I L +A +D+AL L +++
Sbjct: 877 --------CEANTIT-------------------HNIVISGLVKAGNVDDALDLYYDLMS 936
Query: 913 DERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSMKQVGINPTVHVYTSFIVYSFKEKQTR 972
D + YG L+ GL ++GR EA M G P +Y I K +
Sbjct: 937 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 996
Query: 973 RALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVCEAWKVFNYMKKNGPSPDFKAYTMLI 1021
A + +M++EG P L TYS +V +G+V E F +K++G +PD Y ++I
Sbjct: 997 AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLII 1046
BLAST of Cmc04g0115401 vs. ExPASy Swiss-Prot
Match:
Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)
HSP 1 Score: 167.9 bits (424), Expect = 6.0e-40
Identity = 119/419 (28.40%), Postives = 207/419 (49.40%), Query Frame = 0
Query: 628 EIYKI----LSSSSDWKLIKKAL---ENCSVEFSPELVIEILRKCSLDGCAAFHFFAWVG 687
++Y++ L ++ ++K I + L ++ + F L I I+R G +
Sbjct: 112 DVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLE 171
Query: 688 KQPGYN--HTTETYNMAIKVAGLGKDFKHMRSLFYEMRRRGCSITPYTWTIMIMQYARAG 747
+ Y+ T ++YN+ +++ G K ++FY+M R T +T+ +++ +
Sbjct: 172 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVN 231
Query: 748 LTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVDESITLFQEMIHSEYIPDKEL 807
+ AL +M + PN+ Y+ LI SL SK +V+E++ L +EM +PD E
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSL--SKCNRVNEALQLLEEMFLMGCVPDAET 291
Query: 808 LETYLGCLCKLSRLSDARRCIDHLRKVGFS-IPLIYSLYIRALCRARKLDEALTLLQEVI 867
+ LCK R+++A + ++ + GF+ + Y + LC+ ++D A L +
Sbjct: 292 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI- 351
Query: 868 GDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSM-KQVGINPTVHVYTSFIVYSFKEKQ 927
K + I+ +L+HG + GR ++A A ++ M GI P V Y S I +KE
Sbjct: 352 ----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 411
Query: 928 TRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVCEAWKVFNYMKKNGPSPDFKAYTM 987
ALE+L M +GC+P++ +Y+ +V G+ +GK+ EA+ V N M +G P+ +
Sbjct: 412 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 471
Query: 988 LISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRTVIFGLNR--EGKHV--LARDVLQQ 1032
LIS CK R EA+EI EM G P F ++I GL E KH L RD++ +
Sbjct: 472 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
BLAST of Cmc04g0115401 vs. ExPASy Swiss-Prot
Match:
Q9LN69 (Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis thaliana OX=3702 GN=At1g19290 PE=3 SV=2)
HSP 1 Score: 166.4 bits (420), Expect = 1.7e-39
Identity = 182/876 (20.78%), Postives = 358/876 (40.87%), Query Frame = 0
Query: 143 IRGGNGLVSME--------------ERLGSLDVMFSSEIVEKVLKRCFKFPHLALGFFNW 202
+RGGNG + E E L L + FS E++ +L+R P L FN
Sbjct: 34 LRGGNGRIRPELLERVSRLLVLGRYEALHDLSLDFSDELLNSILRRLRLNPEACLEIFNL 93
Query: 203 VKSRDGFQCTTNVFNTVLSIAGEARDLKLIDKLLEEM------------ESYSLQKDIK- 262
+ F+ + ++ I AR+ + L E+ E + K+
Sbjct: 94 ASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGELVRVFKEFSF 153
Query: 263 ---TWTILISLYGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFY 322
+ +++ +Y L +L V+ M G P + +L+ +L G+ +A+ Y
Sbjct: 154 SPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVY 213
Query: 323 QEMAKKGISVVDMKMCKVLLSSLAGSGDTASVLDIAKDMVALFNVQERDV-YHYILKSFC 382
+M +S D+ C +++++ SG+ + AK+ + ++ V Y+ ++ +
Sbjct: 214 DQMISFEVS-PDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYA 273
Query: 383 ISRRIKEALEFIRDLNSKGIVLDTEYFEILVGGLCRANRIEDALELINIIKRKTDV-DGK 442
+ ++ +R ++ +G+ + + L+ G C+ +E+A + ++K K V D
Sbjct: 274 MIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQH 333
Query: 443 IYGIIINWYLRKNEVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEM 502
+YG++++ Y R ++ A+ + NM E+G T+ L+ + + +++ M
Sbjct: 334 MYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM 393
Query: 503 LEKGIELDTVAIMTVVVGNVRQNRITEAWNVFRTMENK---PTWKSCSVFIWELFRISRT 562
+ ++ D T+V G R + EA + M K PT + ++ + RI
Sbjct: 394 NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAF 453
Query: 563 DEIVKVLNEMQELNIVIPDKLFRSVVSYMEKKGD----------VICLEKVKKMRSIVEL 622
+++ + M + + + +++ + K GD V+ + ++ +
Sbjct: 454 HDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVM 513
Query: 623 FPQEGEINRENEAPKIKDISMEVNFKHSKPTSVPCHLETLPRNYREEDLDEIYKILSSSS 682
++ + NEA +I D VN KP +V + Y+ +L E +
Sbjct: 514 ISGLCKMEKVNEAKEILD---NVNIFRCKP-AVQTYQALSHGYYKVGNLKEAF------- 573
Query: 683 DWKLIKKALENCSVEFSPELVIEILRKCSLDGCAAFHFFAWVGKQPGYNHTTETYNMAIK 742
+K+ +E + G T E YN I
Sbjct: 574 ---AVKEYME----------------------------------RKGIFPTIEMYNTLIS 633
Query: 743 VAGLGKDFKHMRSLFYEMRRRGCSITPYTWTIMIMQYARAGLTEIALKSFEEMKESNIKP 802
A + + L E+R RG + T T+ +I + G+ + A + EM E I
Sbjct: 634 GAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITL 693
Query: 803 NANTYKYLIMSLCESKRMKVDESITLFQEMIHSE-----YIPDKELLETYLGCLCKLSRL 862
N N + SL + K+DE+ L Q+++ + Y KE LE K ++
Sbjct: 694 NVNICSKIANSL--FRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKI 753
Query: 863 SDARRCIDHLRKVGFSIP--LIYSLYIRALCRARKLDEALTLLQEVIGDERSKLDSYIYG 922
+++ +++ +P ++Y++ I LC+A KL++A L +++ +R D Y Y
Sbjct: 754 AES---VENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYT 813
Query: 923 SLVHGLLQTGRTEEALAKMNSMKQVGINPTVHVYTSFIVYSFKEKQTRRALEILAKMLQE 967
L+HG G +A + M GI P + Y + I K RA +L K+ Q+
Sbjct: 814 ILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQK 855
BLAST of Cmc04g0115401 vs. ExPASy Swiss-Prot
Match:
P0C8A0 (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX=3702 GN=At3g49730 PE=2 SV=1)
HSP 1 Score: 162.2 bits (409), Expect = 3.3e-38
Identity = 112/457 (24.51%), Postives = 218/457 (47.70%), Query Frame = 0
Query: 618 PRNYREE---DLDEIYKIL-SSSSDWKLIKKALENCSVEFSPELVIEILRKCSLDGCAAF 677
P + +E ++++IY+IL + S ++ AL ++ P L+I +L +C G +
Sbjct: 56 PEKHEDEFAGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGY 115
Query: 678 HFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLFYEMRRRGCS-ITPYTWTIMIM 737
FF W KQPGY H+ E + + + F + L EMR+ I P + +++
Sbjct: 116 RFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMR 175
Query: 738 QYARAGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVDESITLFQEMIHSEY 797
++A A + + A++ +EM + ++P+ + L+ +LC K V E+ +F++M ++
Sbjct: 176 RFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALC--KNGSVKEASKVFEDM-REKF 235
Query: 798 IPDKELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLI-------------------- 857
P+ + L C+ +L +A+ + +++ G ++
Sbjct: 236 PPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYD 295
Query: 858 ----------------YSLYIRALCRARK-LDEALTLLQEVIGDER--SKLDSYIYGSLV 917
Y++ I+ALCR K +DEA+ + E+ ER + D Y +L+
Sbjct: 296 LMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEM---ERYGCEADIVTYTALI 355
Query: 918 HGLLQTGRTEEALAKMNSMKQVGINPTVHVYTSFIVYSFKEKQTRRALEILAKMLQEGCE 977
G + G ++ + ++ M++ G+ P+ Y +V K++Q LE++ KM + GC
Sbjct: 356 SGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCH 415
Query: 978 PSLATYSAIVHGYMNMGKVCEAWKVFNYMKKNGPSPDFKAYTMLISCLCKAGRSEEALEI 1029
P L Y+ ++ +G+V EA +++N M+ NG SP + ++I+ G EA
Sbjct: 416 PDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNH 475
BLAST of Cmc04g0115401 vs. ExPASy TrEMBL
Match:
A0A1S3B6G0 (putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103486703 PE=4 SV=1)
HSP 1 Score: 2035.0 bits (5271), Expect = 0.0e+00
Identity = 1037/1045 (99.23%), Postives = 1040/1045 (99.52%), Query Frame = 0
Query: 1 MIPVRMRRYSNSTLDFLRFQLSQLQILRFSTLVRKRK--SSSSSSSGGIQKSQYPETADT 60
MIPVRMRRYSNSTLDFLRFQLSQLQILRFSTLVRKRK SSSSSSSGGIQKSQYPETADT
Sbjct: 1 MIPVRMRRYSNSTLDFLRFQLSQLQILRFSTLVRKRKSSSSSSSSSGGIQKSQYPETADT 60
Query: 61 SSSFRSLFNEITEILGSESCVRDKISFRDLGLKGSTEGDSLNGEEQLPCVPDGCKNAEQE 120
SSSFRSLFNEITEILGSESCVRDKISFRDLGLKGSTEGDSLNGEEQLPCVPD CKNAEQE
Sbjct: 61 SSSFRSLFNEITEILGSESCVRDKISFRDLGLKGSTEGDSLNGEEQLPCVPDVCKNAEQE 120
Query: 121 TEGAQLVVLEENDVSSVVHQITAVIRGGNGLVSMEERLGSLDVMFSSEIVEKVLKRCFKF 180
TEGAQLVVLEENDVSSVVHQITAVIRGGNGLVSMEERLGSLDVMFSSEIVEKVLKRCFKF
Sbjct: 121 TEGAQLVVLEENDVSSVVHQITAVIRGGNGLVSMEERLGSLDVMFSSEIVEKVLKRCFKF 180
Query: 181 PHLALGFFNWVKSRDGFQCTTNVFNTVLSIAGEARDLKLIDKLLEEMESYSLQKDIKTWT 240
PHLALGFFNWVKSRDGFQCTTNVFNTVLS+AGEARD KLIDKLLEEMESYSLQKDIKTWT
Sbjct: 181 PHLALGFFNWVKSRDGFQCTTNVFNTVLSVAGEARDFKLIDKLLEEMESYSLQKDIKTWT 240
Query: 241 ILISLYGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKK 300
ILISLYGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKK
Sbjct: 241 ILISLYGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKK 300
Query: 301 GISVVDMKMCKVLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKE 360
GISVVDMKMCKVLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKE
Sbjct: 301 GISVVDMKMCKVLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKE 360
Query: 361 ALEFIRDLNSKGIVLDTEYFEILVGGLCRANRIEDALELINIIKRKTDVDGKIYGIIINW 420
ALEFIRDLNSKGIVLDTEYFEILVGGLCRANRIEDALELINIIKRKTDVDGKIYGIIINW
Sbjct: 361 ALEFIRDLNSKGIVLDTEYFEILVGGLCRANRIEDALELINIIKRKTDVDGKIYGIIINW 420
Query: 421 YLRKNEVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEKGIELD 480
YLRKNEVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEKGIELD
Sbjct: 421 YLRKNEVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEKGIELD 480
Query: 481 TVAIMTVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFIWELFRISRTDEIVKVLNEMQ 540
TVAIMTVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFI ELFRISRTDEIVKVLNEMQ
Sbjct: 481 TVAIMTVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFIRELFRISRTDEIVKVLNEMQ 540
Query: 541 ELNIVIPDKLFRSVVSYMEKKGDVICLEKVKKMRSIVELFPQEGEINRENEAPKIKDISM 600
ELNIVIPDKLFRSVVSYMEKKGDVICLEKVKKMRSIVELFPQEGEINRENEAPKIKD+SM
Sbjct: 541 ELNIVIPDKLFRSVVSYMEKKGDVICLEKVKKMRSIVELFPQEGEINRENEAPKIKDLSM 600
Query: 601 EVNFKHSKPTSVPCHLETLPRNYREEDLDEIYKILSSSSDWKLIKKALENCSVEFSPELV 660
EVNFKHSKPTSVPCHLETLPRNYREEDLDEIYKILSSSSDWKLIKKALENCSVEFSPELV
Sbjct: 601 EVNFKHSKPTSVPCHLETLPRNYREEDLDEIYKILSSSSDWKLIKKALENCSVEFSPELV 660
Query: 661 IEILRKCSLDGCAAFHFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLFYEMRRR 720
IEILRKCSLDGCAAFHFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLFYEMRRR
Sbjct: 661 IEILRKCSLDGCAAFHFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLFYEMRRR 720
Query: 721 GCSITPYTWTIMIMQYARAGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVD 780
GCSITPYTWTIMIMQYARAGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVD
Sbjct: 721 GCSITPYTWTIMIMQYARAGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVD 780
Query: 781 ESITLFQEMIHSEYIPDKELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLIYSLYIR 840
ESITLFQEMIHSEYIPDKELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLIYSLYIR
Sbjct: 781 ESITLFQEMIHSEYIPDKELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLIYSLYIR 840
Query: 841 ALCRARKLDEALTLLQEVIGDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSMKQVGIN 900
ALCRARKLDEALTLLQEV+GDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSMKQVGIN
Sbjct: 841 ALCRARKLDEALTLLQEVVGDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSMKQVGIN 900
Query: 901 PTVHVYTSFIVYSFKEKQTRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVCEAWKV 960
PTVHVYTSFIVYSFKEKQTRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVCEAWKV
Sbjct: 901 PTVHVYTSFIVYSFKEKQTRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVCEAWKV 960
Query: 961 FNYMKKNGPSPDFKAYTMLISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRTVIFGLNR 1020
FNYMKKNGPSPDFKAYTMLISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRTVIFGLNR
Sbjct: 961 FNYMKKNGPSPDFKAYTMLISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRTVIFGLNR 1020
Query: 1021 EGKHVLARDVLQQKLGLIRRRKFQI 1044
EGKHVLARDVLQQKLGLIRRRKFQI
Sbjct: 1021 EGKHVLARDVLQQKLGLIRRRKFQI 1045
BLAST of Cmc04g0115401 vs. ExPASy TrEMBL
Match:
A0A5A7TQG0 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004820 PE=4 SV=1)
HSP 1 Score: 2025.8 bits (5247), Expect = 0.0e+00
Identity = 1032/1040 (99.23%), Postives = 1035/1040 (99.52%), Query Frame = 0
Query: 6 MRRYSNSTLDFLRFQLSQLQILRFSTLVRKRK--SSSSSSSGGIQKSQYPETADTSSSFR 65
MRRYSNSTLDFLRFQLSQLQILRFSTLVRKRK SSSSSSSGGIQKSQYPETADTSSSFR
Sbjct: 1 MRRYSNSTLDFLRFQLSQLQILRFSTLVRKRKSSSSSSSSSGGIQKSQYPETADTSSSFR 60
Query: 66 SLFNEITEILGSESCVRDKISFRDLGLKGSTEGDSLNGEEQLPCVPDGCKNAEQETEGAQ 125
SLFNEITEILGSESCVRDKISFRDLGLKGSTEGDSLNGEEQLPCVPD CKNAEQETEGAQ
Sbjct: 61 SLFNEITEILGSESCVRDKISFRDLGLKGSTEGDSLNGEEQLPCVPDVCKNAEQETEGAQ 120
Query: 126 LVVLEENDVSSVVHQITAVIRGGNGLVSMEERLGSLDVMFSSEIVEKVLKRCFKFPHLAL 185
LVVLEENDVSSVVHQITAVIRGGNGLVSMEERLGSLDVMFSSEIVEKVLKRCFKFPHLAL
Sbjct: 121 LVVLEENDVSSVVHQITAVIRGGNGLVSMEERLGSLDVMFSSEIVEKVLKRCFKFPHLAL 180
Query: 186 GFFNWVKSRDGFQCTTNVFNTVLSIAGEARDLKLIDKLLEEMESYSLQKDIKTWTILISL 245
GFFNWVKSRDGFQCTTNVFNTVLS+AGEARD KLIDKLLEEMESYSLQKDIKTWTILISL
Sbjct: 181 GFFNWVKSRDGFQCTTNVFNTVLSVAGEARDFKLIDKLLEEMESYSLQKDIKTWTILISL 240
Query: 246 YGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKKGISVV 305
YGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKKGISVV
Sbjct: 241 YGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKKGISVV 300
Query: 306 DMKMCKVLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKEALEFI 365
DMKMCKVLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKEALEFI
Sbjct: 301 DMKMCKVLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKEALEFI 360
Query: 366 RDLNSKGIVLDTEYFEILVGGLCRANRIEDALELINIIKRKTDVDGKIYGIIINWYLRKN 425
RDLNSKGIVLDTEYFEILVGGLCRANRIEDALELINIIKRKTDVDGKIYGIIINWYLRKN
Sbjct: 361 RDLNSKGIVLDTEYFEILVGGLCRANRIEDALELINIIKRKTDVDGKIYGIIINWYLRKN 420
Query: 426 EVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEKGIELDTVAIM 485
EVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEKGIELDTVAIM
Sbjct: 421 EVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEKGIELDTVAIM 480
Query: 486 TVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFIWELFRISRTDEIVKVLNEMQELNIV 545
TVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFI ELFRISRTDEIVKVLNEMQELNIV
Sbjct: 481 TVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFIRELFRISRTDEIVKVLNEMQELNIV 540
Query: 546 IPDKLFRSVVSYMEKKGDVICLEKVKKMRSIVELFPQEGEINRENEAPKIKDISMEVNFK 605
IPDKLFRSVVSYMEKKGDVICLEKVKKMRSIVELFPQEGEINRENEAPKIKD+SMEVNFK
Sbjct: 541 IPDKLFRSVVSYMEKKGDVICLEKVKKMRSIVELFPQEGEINRENEAPKIKDLSMEVNFK 600
Query: 606 HSKPTSVPCHLETLPRNYREEDLDEIYKILSSSSDWKLIKKALENCSVEFSPELVIEILR 665
HSKPTSVPCHLETLPRNYREEDLDEIYKILSSSSDWKLIKKALENCSVEFSPELVIEILR
Sbjct: 601 HSKPTSVPCHLETLPRNYREEDLDEIYKILSSSSDWKLIKKALENCSVEFSPELVIEILR 660
Query: 666 KCSLDGCAAFHFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLFYEMRRRGCSIT 725
KCSLDGCAAFHFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLFYEMRRRGCSIT
Sbjct: 661 KCSLDGCAAFHFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLFYEMRRRGCSIT 720
Query: 726 PYTWTIMIMQYARAGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVDESITL 785
PYTWTIMIMQYARAGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVDESITL
Sbjct: 721 PYTWTIMIMQYARAGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVDESITL 780
Query: 786 FQEMIHSEYIPDKELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLIYSLYIRALCRA 845
FQEMIHSEYIPDKELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLIYSLYIRALCRA
Sbjct: 781 FQEMIHSEYIPDKELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLIYSLYIRALCRA 840
Query: 846 RKLDEALTLLQEVIGDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSMKQVGINPTVHV 905
RKLDEALTLLQEV+GDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSMKQVGINPTVHV
Sbjct: 841 RKLDEALTLLQEVVGDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSMKQVGINPTVHV 900
Query: 906 YTSFIVYSFKEKQTRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVCEAWKVFNYMK 965
YTSFIVYSFKEKQTRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVCEAWKVFNYMK
Sbjct: 901 YTSFIVYSFKEKQTRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVCEAWKVFNYMK 960
Query: 966 KNGPSPDFKAYTMLISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRTVIFGLNREGKHV 1025
KNGPSPDFKAYTMLISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRTVIFGLNREGKHV
Sbjct: 961 KNGPSPDFKAYTMLISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRTVIFGLNREGKHV 1020
Query: 1026 LARDVLQQKLGLIRRRKFQI 1044
LARDVLQQKLGLIRRRKFQI
Sbjct: 1021 LARDVLQQKLGLIRRRKFQI 1040
BLAST of Cmc04g0115401 vs. ExPASy TrEMBL
Match:
A0A0A0LB46 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782820 PE=4 SV=1)
HSP 1 Score: 1914.0 bits (4957), Expect = 0.0e+00
Identity = 974/1043 (93.38%), Postives = 1002/1043 (96.07%), Query Frame = 0
Query: 4 VRMRR-YSNSTLDFLRFQLSQLQILRFSTLVRKRK--SSSSSSSGGIQKSQYPETADTSS 63
+R+R YSNSTL+F LRFST +RKRK SSSSSSSGG QKSQYPE D SS
Sbjct: 5 IRLRSPYSNSTLNF----------LRFSTFIRKRKGSSSSSSSSGGTQKSQYPEAVDASS 64
Query: 64 SFRSLFNEITEILGSESCVRDKISFRDLGLKGSTEGDSLNGEEQLPCVPDGCKNAEQETE 123
SFRSLFNEITEILGSESCV DKISFRDLGLKGS EG+ LNGEE LP PD CKNAEQETE
Sbjct: 65 SFRSLFNEITEILGSESCVHDKISFRDLGLKGSPEGEFLNGEEHLPGAPDVCKNAEQETE 124
Query: 124 GAQLVVLEENDVSSVVHQITAVIRGGNGLVSMEERLGSLDVMFSSEIVEKVLKRCFKFPH 183
G QLVVLEENDVSSVVH+ITAVIRGGNGLVSMEERLG+LDVMFSSEIVEKVLKRCFKFPH
Sbjct: 125 GTQLVVLEENDVSSVVHEITAVIRGGNGLVSMEERLGNLDVMFSSEIVEKVLKRCFKFPH 184
Query: 184 LALGFFNWVKSRDGFQCTTNVFNTVLSIAGEARDLKLIDKLLEEMESYSLQKDIKTWTIL 243
LALGFFNWVKSRDGFQCTTNVFNTVLSIAGEARD KLIDKLLEEMESYSL KDIKTWTIL
Sbjct: 185 LALGFFNWVKSRDGFQCTTNVFNTVLSIAGEARDFKLIDKLLEEMESYSLLKDIKTWTIL 244
Query: 244 ISLYGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKKGI 303
ISLYGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKKGI
Sbjct: 245 ISLYGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKKGI 304
Query: 304 SVVDMKMCKVLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKEAL 363
SVVDMKMCK+LLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKEAL
Sbjct: 305 SVVDMKMCKMLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKEAL 364
Query: 364 EFIRDLNSKGIVLDTEYFEILVGGLCRANRIEDALELINIIKRKTDVDGKIYGIIINWYL 423
EFIRDLNSKGIVLD+EYFEIL+GGLCRANRIEDALELINIIKRK DVDGKIYGIIINWYL
Sbjct: 365 EFIRDLNSKGIVLDSEYFEILIGGLCRANRIEDALELINIIKRKGDVDGKIYGIIINWYL 424
Query: 424 RKNEVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEKGIELDTV 483
RKNEVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEKGIELDTV
Sbjct: 425 RKNEVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEKGIELDTV 484
Query: 484 AIMTVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFIWELFRISRTDEIVKVLNEMQEL 543
AIMTVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFI ELFRISRTDEIVKVLNEMQEL
Sbjct: 485 AIMTVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFIRELFRISRTDEIVKVLNEMQEL 544
Query: 544 NIVIPDKLFRSVVSYMEKKGDVICLEKVKKMRSIVELFPQEGEINRENEAPKIKDISMEV 603
NIVIPDKLFRSVVSYMEK GDVICLEKVKKM+SIVELFPQE EINREN+AP IKD+ MEV
Sbjct: 545 NIVIPDKLFRSVVSYMEKNGDVICLEKVKKMKSIVELFPQEDEINRENDAPTIKDLGMEV 604
Query: 604 NFKHSKPTSVPCHLETLPRNYREEDLDEIYKILSSSSDWKLIKKALENCSVEFSPELVIE 663
NFKHSKPTSV CHLETLPRNYREEDLD IYKILSSS+DWKLIKKALENCSVEFSPELVIE
Sbjct: 605 NFKHSKPTSVTCHLETLPRNYREEDLDAIYKILSSSTDWKLIKKALENCSVEFSPELVIE 664
Query: 664 ILRKCSLDGCAAFHFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLFYEMRRRGC 723
ILRKCSLDGCAAF+FFAWVGKQPGYNHTTETYNMAIK+AGLGKDFKHMRSLFYEMRRRGC
Sbjct: 665 ILRKCSLDGCAAFNFFAWVGKQPGYNHTTETYNMAIKIAGLGKDFKHMRSLFYEMRRRGC 724
Query: 724 SITPYTWTIMIMQYARAGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVDES 783
SITPYTWTIMIMQYARAGLTEIALKS+EEMKE NIKPNANTYKYLIMSLCESKR KVDE+
Sbjct: 725 SITPYTWTIMIMQYARAGLTEIALKSYEEMKEINIKPNANTYKYLIMSLCESKRRKVDEA 784
Query: 784 ITLFQEMIHSEYIPDKELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLIYSLYIRAL 843
ITLFQEMIHS+YIPDKELLETYLGCLCKLSRLSDA++CIDHLRKVGFSIPL YSLYIRAL
Sbjct: 785 ITLFQEMIHSKYIPDKELLETYLGCLCKLSRLSDAKKCIDHLRKVGFSIPLTYSLYIRAL 844
Query: 844 CRARKLDEALTLLQEVIGDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSMKQVGINPT 903
CRARKLDEALTLL+EV+GDERSKLDSYIYGSLV+GLLQTGRTEEALAKMNSMKQVGINPT
Sbjct: 845 CRARKLDEALTLLEEVVGDERSKLDSYIYGSLVYGLLQTGRTEEALAKMNSMKQVGINPT 904
Query: 904 VHVYTSFIVYSFKEKQTRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVCEAWKVFN 963
VHVYTSFIVYSFKEKQTRRALEILAKMLQEGCEPS+ATYSAIVHGYMNMGKVCEAWKVFN
Sbjct: 905 VHVYTSFIVYSFKEKQTRRALEILAKMLQEGCEPSIATYSAIVHGYMNMGKVCEAWKVFN 964
Query: 964 YMKKNGPSPDFKAYTMLISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRTVIFGLNREG 1023
YMKK GPSPDFKAYTMLISCLCKAGRSEEALEI+S+MLNNGIAPSS+NFRTVIFGLNREG
Sbjct: 965 YMKKYGPSPDFKAYTMLISCLCKAGRSEEALEIISDMLNNGIAPSSINFRTVIFGLNREG 1024
Query: 1024 KHVLARDVLQQKLGLIRRRKFQI 1044
KHVLARDVLQQKLGLIRRRKFQI
Sbjct: 1025 KHVLARDVLQQKLGLIRRRKFQI 1037
BLAST of Cmc04g0115401 vs. ExPASy TrEMBL
Match:
A0A6J1F5L6 (putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111442326 PE=4 SV=1)
HSP 1 Score: 1734.2 bits (4490), Expect = 0.0e+00
Identity = 877/1050 (83.52%), Postives = 961/1050 (91.52%), Query Frame = 0
Query: 1 MIPVRMRR-------YSNSTLDFLRFQLSQLQILRFSTLVRKRKSSSSSSSGGIQKSQYP 60
MI VRMR+ YSNSTL+FLRF LSQ Q+LRFSTL RKR SSS SGG Q+SQ P
Sbjct: 1 MIIVRMRKLIRFQSPYSNSTLNFLRFHLSQFQVLRFSTLARKR--ISSSRSGGTQESQCP 60
Query: 61 ETADTSSSFRSLFNEITEILGSESCVRDKISFRDLGLKGSTEGDSLNGEEQLPCVPDGCK 120
ETA+T SSFRSLFNEITEILGSES V DKIS RDLGLK S DSLNGEEQL C CK
Sbjct: 61 ETAET-SSFRSLFNEITEILGSESYVHDKISSRDLGLKESAAEDSLNGEEQLLCAQGVCK 120
Query: 121 NAEQETEGAQLVVLEENDVSSVVHQITAVIRGGNGLVSMEERLGSLDVMFSSEIVEKVLK 180
NAEQETEG QLVVLEENDVSSVVHQ+ A +RGGNGLVSMEERLGSLDV FSSE+VEKVLK
Sbjct: 121 NAEQETEGIQLVVLEENDVSSVVHQVAAAVRGGNGLVSMEERLGSLDVRFSSEVVEKVLK 180
Query: 181 RCFKFPHLALGFFNWVKSRDGFQCTTNVFNTVLSIAGEARDLKLIDKLLEEMESYSLQKD 240
RCFKFPHLALGFFNWVKSRDGFQCTT+V N +LSIAGEARD KL++KL+EEME +SL+KD
Sbjct: 181 RCFKFPHLALGFFNWVKSRDGFQCTTSVINIMLSIAGEARDFKLVEKLVEEMEYHSLEKD 240
Query: 241 IKTWTILISLYGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQ 300
IKTWTILISLYGNAKLTGK+LMVYSKM+ESGCE DGVVYKTLICSLSAAGKPELAMEFY+
Sbjct: 241 IKTWTILISLYGNAKLTGKALMVYSKMRESGCEIDGVVYKTLICSLSAAGKPELAMEFYR 300
Query: 301 EMAKKGISVVDMKMCKVLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCIS 360
EM K+GI VVDMKM KVLLS AGSGDTASVLDIAKDMVALF VQE DVYHYILKSFCIS
Sbjct: 301 EMVKQGIRVVDMKMSKVLLSCFAGSGDTASVLDIAKDMVALFKVQEHDVYHYILKSFCIS 360
Query: 361 RRIKEALEFIRDLNSKGIVLDTEYFEILVGGLCRANRIEDALELINIIKRKTDVDGKIYG 420
+RIKEAL+FI DLNSKGIVLD +YFEILVGGLCR+NRIEDALEL+NI+K+KT +DGK+YG
Sbjct: 361 KRIKEALKFIHDLNSKGIVLDPKYFEILVGGLCRSNRIEDALELVNIMKKKTVLDGKVYG 420
Query: 421 IIINWYLRKNEVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEK 480
IIINWYLR+N++ KALDLFQNMKE+GY PTTSTYTQLMQHLF LA+YEKGFELYKEMLEK
Sbjct: 421 IIINWYLRQNDILKALDLFQNMKEIGYLPTTSTYTQLMQHLFRLAKYEKGFELYKEMLEK 480
Query: 481 GIELDTVAIMTVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFIWELFRISRTDEIVKV 540
GIELDTVAIMTVV G+V QN I+EAW+VFRTMENKPTWKS SVFI ELFRISRTDE+VKV
Sbjct: 481 GIELDTVAIMTVVAGHVSQNHISEAWSVFRTMENKPTWKSFSVFIRELFRISRTDEVVKV 540
Query: 541 LNEMQELNIVIPDKLFRSVVSYMEKKGDVICLEKVKKMRSIVELFPQEGEINRENEAPKI 600
LNEM ELNIV+PDKLFRSVVSYMEK GD+I LEKVKKMRS VELFPQE E+NRE++APKI
Sbjct: 541 LNEMHELNIVVPDKLFRSVVSYMEKMGDMISLEKVKKMRSKVELFPQECEVNREDDAPKI 600
Query: 601 KDISMEVNFKHSKPTSVPCHLETLPRNYREEDLDEIYKILSSSSDWKLIKKALENCSVEF 660
D+ MEVNF+HSKPTS+ CH ETLPRNYREEDLDE+Y+ILSSS+DWK IKKALENCSVEF
Sbjct: 601 NDLHMEVNFEHSKPTSITCHTETLPRNYREEDLDEVYRILSSSTDWKQIKKALENCSVEF 660
Query: 661 SPELVIEILRKCSLDGCAAFHFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLFY 720
+ E V+EILRKCSLDGCAA FFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSL+Y
Sbjct: 661 TTEFVLEILRKCSLDGCAALQFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLYY 720
Query: 721 EMRRRGCSITPYTWTIMIMQYARAGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCESK 780
EMRR+GC ITP TWTIMIMQY RAGLTEIALKSFEEMK+S IKPNANTYKYLIMSLC SK
Sbjct: 721 EMRRKGCLITPDTWTIMIMQYGRAGLTEIALKSFEEMKQSKIKPNANTYKYLIMSLCGSK 780
Query: 781 RMKVDESITLFQEMIHSEYIPDKELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLIY 840
R KV+E+ITL QEMIHS+YIPDKELLETYLGCLCKL RLSDA+RCID+LR VGF++PLIY
Sbjct: 781 RRKVNEAITLLQEMIHSKYIPDKELLETYLGCLCKLDRLSDAKRCIDNLRNVGFTVPLIY 840
Query: 841 SLYIRALCRARKLDEALTLLQEVIGDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSMK 900
SLYIRALCR KLDEALTLL+EV G ERSKLD+YIYGS++HGLLQ GRT+EALAKMN+MK
Sbjct: 841 SLYIRALCRVGKLDEALTLLEEV-GTERSKLDNYIYGSIIHGLLQRGRTDEALAKMNAMK 900
Query: 901 QVGINPTVHVYTSFIVYSFKEKQTRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVC 960
QVGINPTVHVYTSFIV+SFKE QTRRALEILAKMLQEGCEP++ATYSA+++GYMNMGK
Sbjct: 901 QVGINPTVHVYTSFIVHSFKENQTRRALEILAKMLQEGCEPTIATYSAVIYGYMNMGKFG 960
Query: 961 EAWKVFNYMKKNGPSPDFKAYTMLISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRTVI 1020
EAWKVF+Y+KKNGPSPDFKAY+MLISCLC+AGRSEEAL+I+S+ML++GIAPSS+NFRTV
Sbjct: 961 EAWKVFHYIKKNGPSPDFKAYSMLISCLCEAGRSEEALQIISDMLDSGIAPSSINFRTVF 1020
Query: 1021 FGLNREGKHVLARDVLQQKLGLIRRRKFQI 1044
FGLNREGKH+LARDVLQQKLGLIRRRKF+I
Sbjct: 1021 FGLNREGKHILARDVLQQKLGLIRRRKFKI 1046
BLAST of Cmc04g0115401 vs. ExPASy TrEMBL
Match:
A0A6J1J5L7 (putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111481564 PE=4 SV=1)
HSP 1 Score: 1707.2 bits (4420), Expect = 0.0e+00
Identity = 866/1050 (82.48%), Postives = 952/1050 (90.67%), Query Frame = 0
Query: 1 MIPVRMRR-------YSNSTLDFLRFQLSQLQILRFSTLVRKRKSSSSSSSGGIQKSQYP 60
MI VRMR+ YS STL+FLRF LSQLQ+LRFST VRKR SSS SG Q+SQ P
Sbjct: 1 MIIVRMRKLIRFQSPYSKSTLNFLRFHLSQLQVLRFSTRVRKR--ISSSRSGRTQESQCP 60
Query: 61 ETADTSSSFRSLFNEITEILGSESCVRDKISFRDLGLKGSTEGDSLNGEEQLPCVPDGCK 120
ETA+T SSFRSLFNEITEILGSE+ V DKIS RDLGLK S DSLNGEEQL C CK
Sbjct: 61 ETAET-SSFRSLFNEITEILGSETYVHDKISSRDLGLKESAAEDSLNGEEQLLCAQGVCK 120
Query: 121 NAEQETEGAQLVVLEENDVSSVVHQITAVIRGGNGLVSMEERLGSLDVMFSSEIVEKVLK 180
NAEQETEG QLVVLEENDVSSVVHQ+ A +RGGNGLVSMEERLGSLDV FSSE+VEKVLK
Sbjct: 121 NAEQETEGIQLVVLEENDVSSVVHQVAATVRGGNGLVSMEERLGSLDVRFSSEVVEKVLK 180
Query: 181 RCFKFPHLALGFFNWVKSRDGFQCTTNVFNTVLSIAGEARDLKLIDKLLEEMESYSLQKD 240
RCFKFPHLALGFFNWVKSRDGFQ TT+V N +LSIAGEARD KL++KL+EEME +SLQKD
Sbjct: 181 RCFKFPHLALGFFNWVKSRDGFQFTTSVINIMLSIAGEARDFKLVEKLVEEMEYHSLQKD 240
Query: 241 IKTWTILISLYGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQ 300
IKTWTILISLYGNAKLTGK+LMV SKM+ESGCE DGVVYKTLICSLSAAGKPELAMEFY+
Sbjct: 241 IKTWTILISLYGNAKLTGKALMVCSKMRESGCELDGVVYKTLICSLSAAGKPELAMEFYR 300
Query: 301 EMAKKGISVVDMKMCKVLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCIS 360
EM K+GI VVDMKM KVLLS AGSGDTASVLDIA DMVALF VQE DVYHYILKSFCIS
Sbjct: 301 EMVKQGIRVVDMKMSKVLLSCFAGSGDTASVLDIAMDMVALFKVQEHDVYHYILKSFCIS 360
Query: 361 RRIKEALEFIRDLNSKGIVLDTEYFEILVGGLCRANRIEDALELINIIKRKTDVDGKIYG 420
+RIKEAL+FI DLNSKGIVLD ++FEILVGGLCR+NRIEDALEL+NI+KRKT +DGK+YG
Sbjct: 361 KRIKEALKFIHDLNSKGIVLDPKFFEILVGGLCRSNRIEDALELVNIMKRKTVLDGKVYG 420
Query: 421 IIINWYLRKNEVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEK 480
IIINWYLR+N++ KALDLFQNMKE+GY PTTSTYTQLMQHLF LA+YEKGFELYKEMLEK
Sbjct: 421 IIINWYLRQNDILKALDLFQNMKEIGYLPTTSTYTQLMQHLFRLAKYEKGFELYKEMLEK 480
Query: 481 GIELDTVAIMTVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFIWELFRISRTDEIVKV 540
IELDTVAIMTVV G+V QN I+EAW+VFRTMENKPTWKS SVFI ELFRISRTDE+VKV
Sbjct: 481 AIELDTVAIMTVVAGHVSQNHISEAWSVFRTMENKPTWKSFSVFIRELFRISRTDEVVKV 540
Query: 541 LNEMQELNIVIPDKLFRSVVSYMEKKGDVICLEKVKKMRSIVELFPQEGEINRENEAPKI 600
LNEM ELNIV+PDKLFRSVVSYMEK GD+I LEKVKKMRS VELFPQE E+NRE++APKI
Sbjct: 541 LNEMHELNIVVPDKLFRSVVSYMEKMGDMISLEKVKKMRSKVELFPQECEVNREDDAPKI 600
Query: 601 KDISMEVNFKHSKPTSVPCHLETLPRNYREEDLDEIYKILSSSSDWKLIKKALENCSVEF 660
D+ MEVN +HS+PTS+ CH ETLPRNYREEDLDE+Y+ILSSS+DWK IKKALENCS+EF
Sbjct: 601 NDLRMEVNLEHSEPTSITCHTETLPRNYREEDLDEVYRILSSSTDWKQIKKALENCSIEF 660
Query: 661 SPELVIEILRKCSLDGCAAFHFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLFY 720
+ E V+E+LRKCSLDGCAA FFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSL+Y
Sbjct: 661 TTEFVLEMLRKCSLDGCAALQFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLYY 720
Query: 721 EMRRRGCSITPYTWTIMIMQYARAGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCESK 780
EMRR+GC ITP TWTIMI QY RAGLTEIALKSFEEMK+S IKPNANTYKYLIMSLC SK
Sbjct: 721 EMRRKGCLITPDTWTIMIRQYGRAGLTEIALKSFEEMKQSKIKPNANTYKYLIMSLCGSK 780
Query: 781 RMKVDESITLFQEMIHSEYIPDKELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLIY 840
R KV+E+ITL QEMIHSEYIPDKELLETYLGCLCKL RLSDA+ CID+LR VGF++PLIY
Sbjct: 781 RRKVNEAITLLQEMIHSEYIPDKELLETYLGCLCKLDRLSDAKGCIDYLRNVGFTVPLIY 840
Query: 841 SLYIRALCRARKLDEALTLLQEVIGDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSMK 900
SLYIRALCR KLDEALTLL+EV G ERSKLD+Y+YGS++HGLLQ GRT+EALAKMN+MK
Sbjct: 841 SLYIRALCRVGKLDEALTLLEEV-GTERSKLDNYVYGSIIHGLLQRGRTDEALAKMNAMK 900
Query: 901 QVGINPTVHVYTSFIVYSFKEKQTRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVC 960
QVGINPTVHVYTSFIV+SFKE QTRRALEILAKMLQEGCEP++ATYSA+++GYMNMGK
Sbjct: 901 QVGINPTVHVYTSFIVHSFKENQTRRALEILAKMLQEGCEPTIATYSAVIYGYMNMGKFG 960
Query: 961 EAWKVFNYMKKNGPSPDFKAYTMLISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRTVI 1020
EAWKVF+Y+KKNGPSPDFKAY+MLISCLC+AGRSEEAL I+S+ML++GIAPSS+NFRTV
Sbjct: 961 EAWKVFHYIKKNGPSPDFKAYSMLISCLCEAGRSEEALRIISDMLDSGIAPSSINFRTVF 1020
Query: 1021 FGLNREGKHVLARDVLQQKLGLIRRRKFQI 1044
FGLNREGKH+LARDVLQQKLGLIRRRKF+I
Sbjct: 1021 FGLNREGKHILARDVLQQKLGLIRRRKFKI 1046
BLAST of Cmc04g0115401 vs. TAIR 10
Match:
AT5G06400.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 964.1 bits (2491), Expect = 8.8e-281
Identity = 514/1023 (50.24%), Postives = 697/1023 (68.13%), Query Frame = 0
Query: 25 QILRFSTLVRKRKSSSSSSSGGIQKSQYPETADTSSSFRSLFNEITEILGSESCVRDKIS 84
Q++ FS + KS+ + + K Q TA T SLFNEITEILG++ D+ +
Sbjct: 20 QLVSFSGFSKSSKSNKTRETTTTSKIQAEATAIT-----SLFNEITEILGTDVVKLDETT 79
Query: 85 FRDLGLKGSTEGDSLNGEEQLPCVPDGCKNAEQ----ETEGAQLVVLEENDVSSVVHQIT 144
L+ G + + C +NA E E AQ V+ EE D S VVH+IT
Sbjct: 80 ----RLRSHVSGAVSDNGVSVSCTEGVRQNAAMGFSGEDEKAQKVLHEEVDFSPVVHEIT 139
Query: 145 AVIRGGNGLVSMEERLGSLDVMFSSEIVEKVLKRCFKFPHLALGFFNWVKSRDGFQCTTN 204
+V+RG + LVSME+RL L F EIVE VLKRCFK PHLA+ FFNWVK +DGF
Sbjct: 140 SVVRGDDVLVSMEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVG 199
Query: 205 VFNTVLSIAGEARDLKLIDKLLEEMESYSLQKDIKTWTILISLYGNAKLTGKSLMVYSKM 264
++NT+LSIAGEAR+L ++D+L+ EME KDI+TWTILIS+YG AK GK L+V+ KM
Sbjct: 200 IYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKM 259
Query: 265 KESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKKGISVVDMKMCKVLLSSLAGSGD 324
++SG E D Y +I SL AG+ +LA+EFY+EM +KGI+ ++ K+LL +A S
Sbjct: 260 RKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGIT-FGLRTYKMLLDCIAKSEK 319
Query: 325 TASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKEALEFIRDLNSKGIVLDTEYFEI 384
V IA DMV + + E D + Y+LKSFC+S +IKEALE IR+L +K + LD +YFEI
Sbjct: 320 VDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEI 379
Query: 385 LVGGLCRANRIEDALELINIIKRKTDVDGKIYGIIINWYLRKNEVSKALDLFQNMKEMGY 444
LV GLCRANR+ DALE+++I+KR+ D +YGIII+ YLR+N+VSKAL+ F+ +K+ G
Sbjct: 380 LVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGR 439
Query: 445 FPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEKGIELDTVAIMTVVVGNVRQNRITEAWN 504
P STYT++MQHLF L ++EKG L+ EM+E GIE D+VAI VV G++ QNR+ EAW
Sbjct: 440 PPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWK 499
Query: 505 VFRTMEN---KPTWKSCSVFIWELFRISRTDEIVKVLNEMQELNIVIPDKLFRSVVSYME 564
VF +ME KPTWKS S+F+ EL R SR DEI+K+ N+M IVI D +F V+S ME
Sbjct: 500 VFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSME 559
Query: 565 KKGDVICLEKVKKMRSIVELFPQEGEINRENEAPKIKDISMEVNFKH-SKPTSVPCHLET 624
K G+ + +K+++ + E + + E + +++ + N + +++P L
Sbjct: 560 KNGEKEKIHLIKEIQKRSNSYCDELNGSGKAEFSQEEELVDDYNCPQLVQQSALPPALSA 619
Query: 625 LPRNYREEDLDEIYKILSSSSDWKLIKKALENCSVEFSPELVIEILRKCSLDGCAAFHFF 684
+ + D+ EI ++LSSS DW+ ++ALE +V+F+PELV+E+LR + G A FF
Sbjct: 620 VDK----MDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFF 679
Query: 685 AWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLFYEMRRRGCSITPYTWTIMIMQYAR 744
+WVGK+ GY H +E YNM+IKVAG GKDFK MRSLFYEMRR+GC IT TW IMIMQY R
Sbjct: 680 SWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGR 739
Query: 745 AGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVDESITLFQEMIHSEYIPDK 804
GLT IA+++F+EMK+ + P+++T+K LI LCE K V+E+ F+EMI S ++PD+
Sbjct: 740 TGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDR 799
Query: 805 ELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLIYSLYIRALCRARKLDEALTLLQEV 864
EL++ YLGCLC++ DA+ C+D L K+GF + + YS+YIRALCR KL+EAL+ L
Sbjct: 800 ELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASF 859
Query: 865 IGDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSMKQVGINPTVHVYTSFIVYSFKEKQ 924
G ERS LD Y YGS+VHGLLQ G ++AL K+NSMK++G P VHVYTS IVY FKEKQ
Sbjct: 860 EG-ERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQ 919
Query: 925 TRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVCEAWKVFNYMKKNGPSPDFKAYTM 984
+ LE KM E CEPS+ TY+A++ GYM++GKV EAW F M++ G SPDFK Y+
Sbjct: 920 LEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSK 979
Query: 985 LISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRTVIFGLNREGKHVLARDVLQQKLGLI 1040
I+CLC+A +SE+AL++LSEML+ GIAPS++NFRTV +GLNREGKH LAR LQ+K L+
Sbjct: 980 FINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQKKSALV 1027
BLAST of Cmc04g0115401 vs. TAIR 10
Match:
AT4G31850.1 (proton gradient regulation 3 )
HSP 1 Score: 209.9 bits (533), Expect = 9.7e-54
Identity = 208/883 (23.56%), Postives = 380/883 (43.04%), Query Frame = 0
Query: 193 DGFQCTTNVFNTVLSIAGEARDLKLIDKLLEEMESYSLQKDIKTWTILISLYGNAKLTGK 252
+GF+ + +++++ G+ RD+ + LL+EME+ L+ ++ T+TI I + G A +
Sbjct: 217 EGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE 276
Query: 253 SLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKKGISVVDMKMCKVLL 312
+ + +M + GC PD V Y LI +L A K + A E +++M K G D LL
Sbjct: 277 AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM-KTGRHKPDRVTYITLL 336
Query: 313 SSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKEALEFIRDLNSKGIV 372
+ + D SV +M +V + + ++ + C + EA + + + +GI+
Sbjct: 337 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 396
Query: 373 LDTEYFEILVGGLCRANRIEDALELI-NIIKRKTDVDGKIYGIIINWYLRKNEVSKALDL 432
+ + L+ GL R +R++DALEL N+ Y + I++Y + + AL+
Sbjct: 397 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 456
Query: 433 FQNM-----------------------------------KEMGYFPTTSTYTQLMQHLFS 492
F+ M K++G P + TY +M+
Sbjct: 457 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 516
Query: 493 LAEYEKGFELYKEMLEKGIELDTVAIMTVVVGNVRQNRITEAWNVF---RTMENKPTWKS 552
+ E ++ +L EM+E G E D + + +++ + +R+ EAW +F + M+ KPT +
Sbjct: 517 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 576
Query: 553 CSVFIWELFRISRTDEIVKVLNEMQEL----NIVIPDKLFRSVVSYMEKKGDVICLEKVK 612
+ + L + + E +++ M + N + + LF + E + L K+
Sbjct: 577 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 636
Query: 613 KMRSIVELFPQEGEINRENEAPKIKDISMEVNFKHSKPTSVPCHLETLPRNYREEDLDEI 672
M + ++F I + ++K+ + F H V TL L +
Sbjct: 637 DMGCVPDVFTYNTIIFGLVKNGQVKE---AMCFFHQMKKLVYPDFVTLCTL-----LPGV 696
Query: 673 YKILSSSSDWKLIKKALENCSVE----FSPELVIEILRKCSLDGCAAFHFFAWVGKQPGY 732
K +K+I L NC+ + F +L+ IL + +D +F ++
Sbjct: 697 VKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSF------SERLVA 756
Query: 733 NHTTETYNMAIKVAGLGKDFKH-----MRSLFYEMRRRGCSITPY--TWTIMIMQYARAG 792
N + +I V + KH R+LF E + + P T+ ++I A
Sbjct: 757 NGICRDGD-SILVPIIRYSCKHNNVSGARTLF-EKFTKDLGVQPKLPTYNLLIGGLLEAD 816
Query: 793 LTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVDESITLFQEMIHSEYIPDKEL 852
+ EIA F ++K + P+ TY +L+ + K K+DE L++EM E
Sbjct: 817 MIEIAQDVFLQVKSTGCIPDVATYNFLLDAY--GKSGKIDELFELYKEMSTHE------- 876
Query: 853 LETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLIYSLYIRALCRARKLDEALTLLQEVIG 912
C+ + ++ +++ I L +A +D+AL L +++
Sbjct: 877 --------CEANTIT-------------------HNIVISGLVKAGNVDDALDLYYDLMS 936
Query: 913 DERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSMKQVGINPTVHVYTSFIVYSFKEKQTR 972
D + YG L+ GL ++GR EA M G P +Y I K +
Sbjct: 937 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 996
Query: 973 RALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVCEAWKVFNYMKKNGPSPDFKAYTMLI 1021
A + +M++EG P L TYS +V +G+V E F +K++G +PD Y ++I
Sbjct: 997 AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLII 1046
BLAST of Cmc04g0115401 vs. TAIR 10
Match:
AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 167.9 bits (424), Expect = 4.2e-41
Identity = 119/419 (28.40%), Postives = 207/419 (49.40%), Query Frame = 0
Query: 628 EIYKI----LSSSSDWKLIKKAL---ENCSVEFSPELVIEILRKCSLDGCAAFHFFAWVG 687
++Y++ L ++ ++K I + L ++ + F L I I+R G +
Sbjct: 112 DVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLE 171
Query: 688 KQPGYN--HTTETYNMAIKVAGLGKDFKHMRSLFYEMRRRGCSITPYTWTIMIMQYARAG 747
+ Y+ T ++YN+ +++ G K ++FY+M R T +T+ +++ +
Sbjct: 172 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVN 231
Query: 748 LTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVDESITLFQEMIHSEYIPDKEL 807
+ AL +M + PN+ Y+ LI SL SK +V+E++ L +EM +PD E
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSL--SKCNRVNEALQLLEEMFLMGCVPDAET 291
Query: 808 LETYLGCLCKLSRLSDARRCIDHLRKVGFS-IPLIYSLYIRALCRARKLDEALTLLQEVI 867
+ LCK R+++A + ++ + GF+ + Y + LC+ ++D A L +
Sbjct: 292 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI- 351
Query: 868 GDERSKLDSYIYGSLVHGLLQTGRTEEALAKMNSM-KQVGINPTVHVYTSFIVYSFKEKQ 927
K + I+ +L+HG + GR ++A A ++ M GI P V Y S I +KE
Sbjct: 352 ----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 411
Query: 928 TRRALEILAKMLQEGCEPSLATYSAIVHGYMNMGKVCEAWKVFNYMKKNGPSPDFKAYTM 987
ALE+L M +GC+P++ +Y+ +V G+ +GK+ EA+ V N M +G P+ +
Sbjct: 412 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 471
Query: 988 LISCLCKAGRSEEALEILSEMLNNGIAPSSVNFRTVIFGLNR--EGKHV--LARDVLQQ 1032
LIS CK R EA+EI EM G P F ++I GL E KH L RD++ +
Sbjct: 472 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
BLAST of Cmc04g0115401 vs. TAIR 10
Match:
AT1G19290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 166.4 bits (420), Expect = 1.2e-40
Identity = 182/876 (20.78%), Postives = 358/876 (40.87%), Query Frame = 0
Query: 143 IRGGNGLVSME--------------ERLGSLDVMFSSEIVEKVLKRCFKFPHLALGFFNW 202
+RGGNG + E E L L + FS E++ +L+R P L FN
Sbjct: 34 LRGGNGRIRPELLERVSRLLVLGRYEALHDLSLDFSDELLNSILRRLRLNPEACLEIFNL 93
Query: 203 VKSRDGFQCTTNVFNTVLSIAGEARDLKLIDKLLEEM------------ESYSLQKDIK- 262
+ F+ + ++ I AR+ + L E+ E + K+
Sbjct: 94 ASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGELVRVFKEFSF 153
Query: 263 ---TWTILISLYGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFY 322
+ +++ +Y L +L V+ M G P + +L+ +L G+ +A+ Y
Sbjct: 154 SPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVY 213
Query: 323 QEMAKKGISVVDMKMCKVLLSSLAGSGDTASVLDIAKDMVALFNVQERDV-YHYILKSFC 382
+M +S D+ C +++++ SG+ + AK+ + ++ V Y+ ++ +
Sbjct: 214 DQMISFEVS-PDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYA 273
Query: 383 ISRRIKEALEFIRDLNSKGIVLDTEYFEILVGGLCRANRIEDALELINIIKRKTDV-DGK 442
+ ++ +R ++ +G+ + + L+ G C+ +E+A + ++K K V D
Sbjct: 274 MIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQH 333
Query: 443 IYGIIINWYLRKNEVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEM 502
+YG++++ Y R ++ A+ + NM E+G T+ L+ + + +++ M
Sbjct: 334 MYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM 393
Query: 503 LEKGIELDTVAIMTVVVGNVRQNRITEAWNVFRTMENK---PTWKSCSVFIWELFRISRT 562
+ ++ D T+V G R + EA + M K PT + ++ + RI
Sbjct: 394 NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAF 453
Query: 563 DEIVKVLNEMQELNIVIPDKLFRSVVSYMEKKGD----------VICLEKVKKMRSIVEL 622
+++ + M + + + +++ + K GD V+ + ++ +
Sbjct: 454 HDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVM 513
Query: 623 FPQEGEINRENEAPKIKDISMEVNFKHSKPTSVPCHLETLPRNYREEDLDEIYKILSSSS 682
++ + NEA +I D VN KP +V + Y+ +L E +
Sbjct: 514 ISGLCKMEKVNEAKEILD---NVNIFRCKP-AVQTYQALSHGYYKVGNLKEAF------- 573
Query: 683 DWKLIKKALENCSVEFSPELVIEILRKCSLDGCAAFHFFAWVGKQPGYNHTTETYNMAIK 742
+K+ +E + G T E YN I
Sbjct: 574 ---AVKEYME----------------------------------RKGIFPTIEMYNTLIS 633
Query: 743 VAGLGKDFKHMRSLFYEMRRRGCSITPYTWTIMIMQYARAGLTEIALKSFEEMKESNIKP 802
A + + L E+R RG + T T+ +I + G+ + A + EM E I
Sbjct: 634 GAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITL 693
Query: 803 NANTYKYLIMSLCESKRMKVDESITLFQEMIHSE-----YIPDKELLETYLGCLCKLSRL 862
N N + SL + K+DE+ L Q+++ + Y KE LE K ++
Sbjct: 694 NVNICSKIANSL--FRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKI 753
Query: 863 SDARRCIDHLRKVGFSIP--LIYSLYIRALCRARKLDEALTLLQEVIGDERSKLDSYIYG 922
+++ +++ +P ++Y++ I LC+A KL++A L +++ +R D Y Y
Sbjct: 754 AES---VENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYT 813
Query: 923 SLVHGLLQTGRTEEALAKMNSMKQVGINPTVHVYTSFIVYSFKEKQTRRALEILAKMLQE 967
L+HG G +A + M GI P + Y + I K RA +L K+ Q+
Sbjct: 814 ILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQK 855
BLAST of Cmc04g0115401 vs. TAIR 10
Match:
AT3G49730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 162.2 bits (409), Expect = 2.3e-39
Identity = 112/457 (24.51%), Postives = 218/457 (47.70%), Query Frame = 0
Query: 618 PRNYREE---DLDEIYKIL-SSSSDWKLIKKALENCSVEFSPELVIEILRKCSLDGCAAF 677
P + +E ++++IY+IL + S ++ AL ++ P L+I +L +C G +
Sbjct: 56 PEKHEDEFAGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGY 115
Query: 678 HFFAWVGKQPGYNHTTETYNMAIKVAGLGKDFKHMRSLFYEMRRRGCS-ITPYTWTIMIM 737
FF W KQPGY H+ E + + + F + L EMR+ I P + +++
Sbjct: 116 RFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMR 175
Query: 738 QYARAGLTEIALKSFEEMKESNIKPNANTYKYLIMSLCESKRMKVDESITLFQEMIHSEY 797
++A A + + A++ +EM + ++P+ + L+ +LC K V E+ +F++M ++
Sbjct: 176 RFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALC--KNGSVKEASKVFEDM-REKF 235
Query: 798 IPDKELLETYLGCLCKLSRLSDARRCIDHLRKVGFSIPLI-------------------- 857
P+ + L C+ +L +A+ + +++ G ++
Sbjct: 236 PPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYD 295
Query: 858 ----------------YSLYIRALCRARK-LDEALTLLQEVIGDER--SKLDSYIYGSLV 917
Y++ I+ALCR K +DEA+ + E+ ER + D Y +L+
Sbjct: 296 LMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEM---ERYGCEADIVTYTALI 355
Query: 918 HGLLQTGRTEEALAKMNSMKQVGINPTVHVYTSFIVYSFKEKQTRRALEILAKMLQEGCE 977
G + G ++ + ++ M++ G+ P+ Y +V K++Q LE++ KM + GC
Sbjct: 356 SGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCH 415
Query: 978 PSLATYSAIVHGYMNMGKVCEAWKVFNYMKKNGPSPDFKAYTMLISCLCKAGRSEEALEI 1029
P L Y+ ++ +G+V EA +++N M+ NG SP + ++I+ G EA
Sbjct: 416 PDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNH 475
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_008442952.2 | 0.0e+00 | 99.23 | PREDICTED: putative pentatricopeptide repeat-containing protein At5g06400, mitoc... | [more] |
| KAA0043791.1 | 0.0e+00 | 99.23 | putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] ... | [more] |
| XP_004136721.2 | 0.0e+00 | 93.16 | putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial [C... | [more] |
| XP_038903598.1 | 0.0e+00 | 87.91 | putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial [B... | [more] |
| XP_023528126.1 | 0.0e+00 | 83.71 | putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial [C... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q9FNG8 | 1.2e-279 | 50.24 | Putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial OS... | [more] |
| Q9SZ52 | 1.4e-52 | 23.56 | Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop... | [more] |
| Q9FMF6 | 6.0e-40 | 28.40 | Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... | [more] |
| Q9LN69 | 1.7e-39 | 20.78 | Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis th... | [more] |
| P0C8A0 | 3.3e-38 | 24.51 | Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S3B6G0 | 0.0e+00 | 99.23 | putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial OS... | [more] |
| A0A5A7TQG0 | 0.0e+00 | 99.23 | Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... | [more] |
| A0A0A0LB46 | 0.0e+00 | 93.38 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782820 PE=4 SV=1 | [more] |
| A0A6J1F5L6 | 0.0e+00 | 83.52 | putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial OS... | [more] |
| A0A6J1J5L7 | 0.0e+00 | 82.48 | putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial OS... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G06400.1 | 8.8e-281 | 50.24 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G31850.1 | 9.7e-54 | 23.56 | proton gradient regulation 3 | [more] |
| AT5G64320.1 | 4.2e-41 | 28.40 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G19290.1 | 1.2e-40 | 20.78 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G49730.1 | 2.3e-39 | 24.51 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
