
Cmc04g0105161 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCAAATAGAAGAGAATGGATGTTGGTTGCAAATTCAATAGAGATGGAAGTCTTATCCATACATACAAGATGATGCAAACTTGCAATTACAAGTGAACTTTAAAGAGAATTTAAGGTGAGGTTTATACTTTATTTAAACAATGGACAAGAATTTGACGATGAAAATAACAAAGCGATGTTAATTTTCTTTTTTAGAAGAACTGGGAGTTTCGAACCCGCGCCGAAGAAGAGAAACCAAAGAAAGAATTATGAGACTGCTCTCTCAAACATTTCGTTGCCAAAAACCCCCTATTTCAAATCCACGACTACCCAAATCTTCTTCTTCCTCAACCAAGGGTCCAACACTGATCGTTAAATCGGAGGAGCCGAAGCCTAAGCAATGGTGTGTTTATCTCATCATCTCCTCCAATTCCCCCATCAAAACCTATGTAGGGGTCACCCTTGACTTCGATCGACGGTAACTCCAATTTCTTCTCTTCTGTTCCTTGTTCCAACAACAGATTCCATGATTTGAGGTTGAAAAGTTATCTGTGTCATCTTCGATTAGCCTTAAAAAGCTGATAGCCTCTAGTGAATTTCATTGGCATACAAATTGGCACTTTGCAACTTTTAGATGTCCTTTATGCATAAAAGCTATACAAATATTTCTTCATGTCATAAAGTTGGGCTCTTGTACAGTTTGAAACAGCATAATGGTGAAATAAAAGGTGGTGCAAAAGCAACTCAAGCGGGACGACCCTGGATTTGTGCGTGCACAATTCATGGTTTTAAAGACCAAAGTCAAGGTATTCAATTAAATTACATACTTCTAGAATCATGCTGCAATTTGGGCTCTAATTTCAAGTGCATTGCTTGGTTTTTCGTGATTGTTGTCATTCTAGACATTATGTTGCCTTGGGCTTTTGCAAACTTGAGTTGTCTCCTAGTTTCTAGGTTGTGGCAGTGATCTTGCTAAGTAAGATAGATGACAATTCATGATGGATATGTGCCAAGTGCGATAGTATTGGGTACTAGCAGTTGAAGCATTGATGGGGCCAGAGGAGGCAAAAGATAATGTGGTGACTTGGGATTTCATTTCATGCTCCAAAAGACACAGGGAATAGAAGAAACTTTAGTTAACCTAAAATTTTAATTCATCAATTAAAGGTGGAAAATTTTCTTTATCTGTTTAAGTACCAGTATAAGATGATTCAAGGTTGAAGACACTACTCTTGTTAGTTGACAAGAAAGTGCTGCAAAACCCTGTGCCAGAATACCGAAGACATACTTTCTGGTATCTGAAACTCTCTTATCCTTGCAACTGGAAGTACTAATGAGACTGGAAATAGGCAAATACATAGAATGCAGCGTTTAAATTGTTTTGTACTCTTAACTGGCCCCCTTAAACAGCATTGGCAACAGGAGTAGGAGTTAAACATGTTTAAATTAAGGGTGCATATCTGAGTGGAAACTGACATGCTATGGCAACGCCAAGTAAGAAGATATTTAGCTTGATTGGGCCATCGTCATATAAATCCATGGAAATGGTCTCCCATATTGGGTAAAAGTGCATCAATATAGCTGCAAAAGGAGAGACAATGGTAACAAATATAATACTGTGCTAGACCTTTTAAGGGGTGTGGCCCAAGGAGTTAGGAGAGGAGATGGGAGGAGCTCCACTTCGCCCAAGGAGTTTGTAGGCTTCCTAACTAAAACCCATCAATTTTGTGTCATATTAAATCGTTGCACTATGAGTCCTAGGAGCTGACAACTCCACTCCTTATCCGAAACACCCCTTTCGTAAGTGAGTGTGAAGCATAAGAGAGTCGGGAAGGAGTGACTTGGCATTAATCGAGAACTGTATTGGTTAGGATGGATGTAACTAGTTAGTTAGACCAGCATGAGCGGTGTGACTTGCGTAGTATTTAGAAGTGAGATCAGGCCAGAGATAGGGAACTCTTGGATTCTCCCTTAGCTACACATTATTTAATATGAAACAGTTTCTATCATATAATTTTTTCTTCCCATAAGGTAGAGATCTAGAAACAAGCTCATGAACTTTCATTAATGTCTACCAAAAGGGCACAAATAAAGGCAATAGTAAACACAGATGATCAGATAATAGTTGAATTTTTTTTCCTGTTTGGGAAAGGAACTGATACATTTTGCAGGTGAAATGGTCAAGAACAGTTTCAGGGCTCCATAATTCATGCCCTAAGTTTGTGTAATGAACCAACTATGATATTTCTGATTTCCACTGCTGAGACAACTGCATGCATTAAATACTGCTGATTGGATTGACTTATTTATGCAAAGAAACAAACGTATTCAATATTTTACACAGCTTGCATTCCTCTTGCTTATCCATTTGGTAATCATCAGTTCTCAAATTATATGCATGTTAAGACTCATACCTACCAAATTGGGCCTTCCATCTTTAGTGCCTTTAACATCTTTTTCCTTTAGAAATGAAACAAGTTGCAATTTTTTAATCACCATGTGTGGTATCCCATTTATCATTCGCATGGCATTGGAAGGGAAGTAGTTGGGGGTGTACTTACTTCTGTCAAGGGAAATGAAGCACCTGGGAGATTTCTAGTACTCCCCTAGTATTATACTTCCTTTGTTCATACTATAAATTGGTCTTCATAAATGTTAGTAGATCCGACCCTACTTTTAAAAAGCGTGTTGTTGTGATACACAATAAATGGAGGGAGTTTTTCGTAGTCTCATAGTAAAGAAAATTATCCCCAACTCATTGTCATCCTTTAAACAACTTTTGGTAAGAAGTAATTTGTAGTAATCACTACACAACAAAAATTGTCGAGTTTCACTTGTATCTATTGATCGTATGTTATGTGACTTAATCTTATAAATGTCTTGTTTCTGGTTGCATTTATGATTCATATTGTTGTGCTATGAACATTCTTCAAATTTCATTAAGACAATGATTTCATTTTGAAACCTTATATTAAGTTTTTCTTTGGTTCATCAACTTGACACCGAATTTCTCGTGTTTTTCAACCGAGAAATGTTCTGTAAAATCATTCCCACACCATTTCTGATGCTGTTTTTGTATCCTTTATATGCAGCTTGTGAGTTTGAATCAAAATGGAAAAAAGTTTCAAGGAAAATATCATATGAGAAGAAGGAGGATGATGTGGGAAAGCAATTAGATAATCAAACATTAAGATTACTCAAGCACAGGCAAAGAGCTTTAGGAAAAGTGAAGTGTCTGTTTGATTGCAGTCATTTTGAGTTTGATTGGAAATTAGATCCTTTCTGATTCTTTATATGGGTTGTGGTTTTTCTTTTTCTTTTACAAATATTTATATATTTATTTTCAATTCTATGAATTGAAATAATGATTGTCTATAAGATAAATATCT TCAAATAGAAGAGAATGGATGTTGGTTGCAAATTCAATAGAGATGGAAGTCTTATCCATACATACAAGATGATGCAAACTTGCAATTACAAGTGAACTTTAAAGAGAATTTAAGAACTGGGAGTTTCGAACCCGCGCCGAAGAAGAGAAACCAAAGAAAGAATTATGAGACTGCTCTCTCAAACATTTCGTTGCCAAAAACCCCCTATTTCAAATCCACGACTACCCAAATCTTCTTCTTCCTCAACCAAGGGTCCAACACTGATCGTTAAATCGGAGGAGCCGAAGCCTAAGCAATGGTGTGTTTATCTCATCATCTCCTCCAATTCCCCCATCAAAACCTATGTAGGGGTCACCCTTGACTTCGATCGACGTTTGAAACAGCATAATGGTGAAATAAAAGGTGGTGCAAAAGCAACTCAAGCGGGACGACCCTGGATTTGTGCGTGCACAATTCATGGTTTTAAAGACCAAAGTCAAGGTATTCAATTAAATTACATACTTCTAGAATCATGCTGCAATTTGGGCTCTAATTTCAAGTGCATTGCTTGGTTTTTCGTGATTGTTGTCATTCTAGACATTATGTTGCCTTGGGCTTTTGCAAACTTGAGTTGTCTCCTAGTTTCTAGGTTGTGGCAGTGATCTTGCTAAGTAAGATAGATGACAATTCATGATGGATATGTGCCAAGTGCGATAGTATTGGGTACTAGCAGTTGAAGCATTGATGGGGCCAGAGGAGGCAAAAGATAATGTGGTGACTTGGGATTTCATTTCATGCTCCAAAAGACACAGGGAATAGAAGAAACTTTAGTTAACCTAAAATTTTAATTCATCAATTAAAGGTGGAAAATTTTCTTTATCTGTTTAAGTACCAGTATAAGATGATTCAAGGTTGAAGACACTACTCTTGTTAGTTGACAAGAAAGTGCTGCAAAACCCTGTGCCAGAATACCGAAGACATACTTTCTGGTATCTGAAACTCTCTTATCCTTGCAACTGGAAGTACTAATGAGACTGGAAATAGGCAAATACATAGAATGCAGCGTTTAAATTGTTTTGTACTCTTAACTGGCCCCCTTAAACAGCATTGGCAACAGGAGTAGGAGTTAAACATGTTTAAATTAAGGGTGCATATCTGAGTGGAAACTGACATGCTATGGCAACGCCAAGTAAGAAGATATTTAGCTTGATTGGGCCATCGTCATATAAATCCATGGAAATGGTCTCCCATATTGGGTAAAAGTGCATCAATATAGCTGCAAAAGGAGAGACAATGGTAACAAATATAATACTGTGCTAGACCTTTTAAGGGGTGTGGCCCAAGGAGTTAGGAGAGGAGATGGGAGGAGCTCCACTTCGCCCAAGGAGTTTGTAGGCTTCCTAACTAAAACCCATCAATTTTGTGTCATATTAAATCGTTGCACTATGAGTCCTAGGAGCTGACAACTCCACTCCTTATCCGAAACACCCCTTTCGTAAGTGAGTGTGAAGCATAAGAGAGTCGGGAAGGAGTGACTTGGCATTAATCGAGAACTGTATTGGTTAGGATGGATGTAACTAGTTAGTTAGACCAGCATGAGCGGTGTGACTTGCGTAGTATTTAGAAGTGAGATCAGGCCAGAGATAGGGAACTCTTGGATTCTCCCTTAGCTACACATTATTTAATATGAAACAGTTTCTATCATATAATTTTTTCTTCCCATAAGGTAGAGATCTAGAAACAAGCTCATGAACTTTCATTAATGTCTACCAAAAGGGCACAAATAAAGGCAATAGTAAACACAGATGATCAGATAATAGTTGAATTTTTTTTCCTGTTTGGGAAAGGAACTGATACATTTTGCAGGTGAAATGGTCAAGAACAGTTTCAGGGCTCCATAATTCATGCCCTAAGTTTGTGTAATGAACCAACTATGATATTTCTGATTTCCACTGCTGAGACAACTGCATGCATTAAATACTGCTGATTGGATTGACTTATTTATGCAAAGAAACAAACGTATTCAATATTTTACACAGCTTGCATTCCTCTTGCTTATCCATTTGGTAATCATCAGTTCTCAAATTATATGCATGTTAAGACTCATACCTACCAAATTGGGCCTTCCATCTTTAGTGCCTTTAACATCTTTTTCCTTTAGAAATGAAACAAGTTGCAATTTTTTAATCACCATGTGTGGTATCCCATTTATCATTCGCATGGCATTGGAAGGGAAGTAGTTGGGGGTGTACTTACTTCTGTCAAGGGAAATGAAGCACCTGGGAGATTTCTAGTACTCCCCTAGTATTATACTTCCTTTGTTCATACTATAAATTGGTCTTCATAAATGTTAGTAGATCCGACCCTACTTTTAAAAAGCGTGTTGTTGTGATACACAATAAATGGAGGGAGTTTTTCGTAGTCTCATAGTAAAGAAAATTATCCCCAACTCATTGTCATCCTTTAAACAACTTTTGGTAAGAAGTAATTTGTAGTAATCACTACACAACAAAAATTGTCGAGTTTCACTTGTATCTATTGATCGTATGTTATGTGACTTAATCTTATAAATGTCTTGTTTCTGGTTGCATTTATGATTCATATTGTTGTGCTATGAACATTCTTCAAATTTCATTAAGACAATGATTTCATTTTGAAACCTTATATTAAGTTTTTCTTTGGTTCATCAACTTGACACCGAATTTCTCGTGTTTTTCAACCGAGAAATGTTCTGTAAAATCATTCCCACACCATTTCTGATGCTGTTTTTGTATCCTTTATATGCAGCTTGTGAGTTTGAATCAAAATGGAAAAAAGTTTCAAGGAAAATATCATATGAGAAGAAGGAGGATGATGTGGGAAAGCAATTAGATAATCAAACATTAAGATTACTCAAGCACAGGCAAAGAGCTTTAGGAAAAGTGAAGTGTCTGTTTGATTGCAGTCATTTTGAGTTTGATTGGAAATTAGATCCTTTCTGATTCTTTATATGGGTTGTGGTTTTTCTTTTTCTTTTACAAATATTTATATATTTATTTTCAATTCTATGAATTGAAATAATGATTGTCTATAAGATAAATATCT ATGAGACTGCTCTCTCAAACATTTCGTTGCCAAAAACCCCCTATTTCAAATCCACGACTACCCAAATCTTCTTCTTCCTCAACCAAGGGTCCAACACTGATCGTTAAATCGGAGGAGCCGAAGCCTAAGCAATGGTGTGTTTATCTCATCATCTCCTCCAATTCCCCCATCAAAACCTATGTAGGGGTCACCCTTGACTTCGATCGACGTTTGAAACAGCATAATGGTGAAATAAAAGGTGGTGCAAAAGCAACTCAAGCGGGACGACCCTGGATTTGTGCGTGCACAATTCATGGTTTTAAAGACCAAAGTCAAGGTATTCAATTAAATTACATACTTCTAGAATCATGCTGCAATTTGGGCTCTAATTTCAAGTGCATTGCTTGGTTTTTCGTGATTGTTGTCATTCTAGACATTATGTTGCCTTGGGCTTTTGCAAACTTGAGTTGTCTCCTAGTTTCTAGGTTGTGGCAGTGA MRLLSQTFRCQKPPISNPRLPKSSSSSTKGPTLIVKSEEPKPKQWCVYLIISSNSPIKTYVGVTLDFDRRLKQHNGEIKGGAKATQAGRPWICACTIHGFKDQSQGIQLNYILLESCCNLGSNFKCIAWFFVIVVILDIMLPWAFANLSCLLVSRLWQ Homology
BLAST of Cmc04g0105161 vs. NCBI nr
Match: XP_008461838.1 (PREDICTED: structure-specific endonuclease subunit slx1 [Cucumis melo] >XP_008461839.1 PREDICTED: structure-specific endonuclease subunit slx1 [Cucumis melo]) HSP 1 Score: 219.2 bits (557), Expect = 2.6e-53 Identity = 104/108 (96.30%), Postives = 105/108 (97.22%), Query Frame = 0
BLAST of Cmc04g0105161 vs. NCBI nr
Match: XP_004151512.1 (structure-specific endonuclease subunit SLX1 [Cucumis sativus] >KGN58557.1 hypothetical protein Csa_001754 [Cucumis sativus]) HSP 1 Score: 195.3 bits (495), Expect = 4.0e-46 Identity = 96/109 (88.07%), Postives = 100/109 (91.74%), Query Frame = 0
BLAST of Cmc04g0105161 vs. NCBI nr
Match: XP_038903986.1 (structure-specific endonuclease subunit slx1 isoform X3 [Benincasa hispida]) HSP 1 Score: 189.5 bits (480), Expect = 2.2e-44 Identity = 94/109 (86.24%), Postives = 97/109 (88.99%), Query Frame = 0
BLAST of Cmc04g0105161 vs. NCBI nr
Match: XP_038903985.1 (structure-specific endonuclease subunit slx1 isoform X2 [Benincasa hispida]) HSP 1 Score: 189.1 bits (479), Expect = 2.9e-44 Identity = 93/106 (87.74%), Postives = 96/106 (90.57%), Query Frame = 0
BLAST of Cmc04g0105161 vs. NCBI nr
Match: KAG7018060.1 (slx1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 188.0 bits (476), Expect = 6.4e-44 Identity = 94/117 (80.34%), Postives = 100/117 (85.47%), Query Frame = 0
BLAST of Cmc04g0105161 vs. ExPASy Swiss-Prot
Match: B6JY16 (Structure-specific endonuclease subunit slx1 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) OX=402676 GN=slx1 PE=3 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 3.0e-12 Identity = 31/69 (44.93%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of Cmc04g0105161 vs. ExPASy Swiss-Prot
Match: Q9P7M3 (Structure-specific endonuclease subunit slx1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=slx1 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 4.8e-10 Identity = 29/69 (42.03%), Postives = 43/69 (62.32%), Query Frame = 0
BLAST of Cmc04g0105161 vs. ExPASy Swiss-Prot
Match: B6QFH5 (Structure-specific endonuclease subunit slx1 OS=Talaromyces marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) OX=441960 GN=slx1 PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09 Identity = 32/77 (41.56%), Postives = 42/77 (54.55%), Query Frame = 0
BLAST of Cmc04g0105161 vs. ExPASy Swiss-Prot
Match: B8MDD1 (Structure-specific endonuclease subunit slx1 OS=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) OX=441959 GN=slx1 PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09 Identity = 30/75 (40.00%), Postives = 42/75 (56.00%), Query Frame = 0
BLAST of Cmc04g0105161 vs. ExPASy Swiss-Prot
Match: B9WGW9 (Structure-specific endonuclease subunit SLX1 OS=Candida dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL Y-17841) OX=573826 GN=SLX1 PE=3 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-08 Identity = 30/75 (40.00%), Postives = 43/75 (57.33%), Query Frame = 0
BLAST of Cmc04g0105161 vs. ExPASy TrEMBL
Match: A0A1S3CFH5 (structure-specific endonuclease subunit slx1 OS=Cucumis melo OX=3656 GN=LOC103500344 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 1.3e-53 Identity = 104/108 (96.30%), Postives = 105/108 (97.22%), Query Frame = 0
BLAST of Cmc04g0105161 vs. ExPASy TrEMBL
Match: A0A0A0LCZ9 (GIY-YIG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G683170 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.9e-46 Identity = 96/109 (88.07%), Postives = 100/109 (91.74%), Query Frame = 0
BLAST of Cmc04g0105161 vs. ExPASy TrEMBL
Match: A0A6J1F1V2 (structure-specific endonuclease subunit slx1 OS=Cucurbita moschata OX=3662 GN=LOC111441428 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 3.1e-44 Identity = 94/117 (80.34%), Postives = 100/117 (85.47%), Query Frame = 0
BLAST of Cmc04g0105161 vs. ExPASy TrEMBL
Match: A0A6J1J559 (structure-specific endonuclease subunit slx1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481456 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 2.9e-42 Identity = 89/106 (83.96%), Postives = 96/106 (90.57%), Query Frame = 0
BLAST of Cmc04g0105161 vs. ExPASy TrEMBL
Match: A0A6J1J5C9 (structure-specific endonuclease subunit slx1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481456 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 5.0e-42 Identity = 90/117 (76.92%), Postives = 98/117 (83.76%), Query Frame = 0
BLAST of Cmc04g0105161 vs. TAIR 10
Match: AT5G43210.1 (Excinuclease ABC, C subunit, N-terminal ) HSP 1 Score: 116.7 bits (291), Expect = 1.7e-26 Identity = 62/112 (55.36%), Postives = 73/112 (65.18%), Query Frame = 0
BLAST of Cmc04g0105161 vs. TAIR 10
Match: AT2G30350.2 (Excinuclease ABC, C subunit, N-terminal ) HSP 1 Score: 52.8 bits (125), Expect = 3.0e-07 Identity = 22/54 (40.74%), Postives = 32/54 (59.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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