Cmc04g0095261 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0095261
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Dynein light chain
Location	CMiso1.1chr04: 8517077 .. 8518512 (-)
RNA-Seq Expression	Cmc04g0095261
Synteny	Cmc04g0095261

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGATTTAGTGATGATTCTACGAACATCCAATAGGGACCCCATGGAGAAGGATACATTGATGTGGGTGAGGCTAGGAACAGAACACCAATCAAAGTTTATCCCAAAACTCTATATAACTAAACTAGTGTTCCCTTCAAGTCCTCCGCCCACAGCCACCACCGTAAGCTCCCTCGTGTGTGAGTGATATAATATTGATTATTTTAGCCATGTTAGAAGGGAAAGCAATCATCGGAGAAACGGATATGCTGGAGGCCATGCAACAAGACGCTTTGAACCTTGCATCTAAGGCACTTGACAGTTTTGATGTCACTGAAGCCACTGACATCGCCCGTTTCATTAAAAAGGTACAACTTCTCTTTCTAAATAATTAGTCCAATACATACATTATCTTGTAAGAGAAATTGAACTCAACTCATACTTGCAAATTTTACGGTTATGTAAATTTGAAGTATAACTACAAATATCGTCATATTTAGAGTGGTTTTTACAATTTGTTCCATTTTGGTTTTCCCACTTTTAAACATCTAATTTTTATCTTCGTATTTTAATTAATAATTTTTTATATTAGTCTTTTAAGTTAATTTATGCAATTGTTGAATTATCAGATAAACATTACTGTTTTTGGTGTATGTGTGACAGCATCCAAGTATTGTGCTTTTCTTTATATAAATTTTGAATATAGTTACGCAACAACTTTTGTTTTATGAAAAATTATTATTAATGCTTTGGATTAAAAATTAATTAAAATTGAACCATAAAAAAATAGAAATGAAAAATTATATCATAATTCTTTCTTTTTTTTTTTTTTTTCTTTTGAGCTTATGAGAAAAGAAAAAGAAATTAAAAAGAACTTATAACTATAAATAAGTAAATCGGTAGACGTAGTTGAATTGACATGAAATTTGTAGAATTATATTGTGTGGTTAATAAAAGATTTATCGTTTTAGGGTTATTTAAAAATGATGGATATAAGATAAGAATTTAATAAATTTTGAAAATATTTTCGAGAATGAAAGGAAAGTGGTCAATATTTGTTGATGATTTATATTGGAAAAAATGAGCAGGAATTTGACAGGACATATGGGGGAGGATGGCAATGCATAGTGGGGACAGATTTTGGATCATTTGTGACACACTGTTTTGGATGCTTCATTTACTTTTGTGTTGGAAGTCTTGCAGTTTTGCTCTTTAGAGGTTCTGCTGCCTCTCAAGAACAACAATTAGTACCTGACCCATCAACTCATCACTTTTCTCTTATCGACACTCTCAAACCATGATTACTATATTACACTTTTCTTTCTTGATTTCTGATCTCTTCTCTTATATCATCATCTCATATCCCCAAATTTTTATCTTATAATTAGTATGTGCTATATGTATCAAAGTGCTTTTTTAAATGCTTAAATCACTTTTAATTTTCTTCTCAATATCCACTC

mRNA sequence

GGATTTAGTGATGATTCTACGAACATCCAATAGGGACCCCATGGAGAAGGATACATTGATGTGGGTGAGGCTAGGAACAGAACACCAATCAAAGTTTATCCCAAAACTCTATATAACTAAACTAGTGTTCCCTTCAAGTCCTCCGCCCACAGCCACCACCGTAAGCTCCCTCGTGTGTGAGTGATATAATATTGATTATTTTAGCCATGTTAGAAGGGAAAGCAATCATCGGAGAAACGGATATGCTGGAGGCCATGCAACAAGACGCTTTGAACCTTGCATCTAAGGCACTTGACAGTTTTGATGTCACTGAAGCCACTGACATCGCCCGTTTCATTAAAAAGGAATTTGACAGGACATATGGGGGAGGATGGCAATGCATAGTGGGGACAGATTTTGGATCATTTGTGACACACTGTTTTGGATGCTTCATTTACTTTTGTGTTGGAAGTCTTGCAGTTTTGCTCTTTAGAGGTTCTGCTGCCTCTCAAGAACAACAATTAGTACCTGACCCATCAACTCATCACTTTTCTCTTATCGACACTCTCAAACCATGATTACTATATTACACTTTTCTTTCTTGATTTCTGATCTCTTCTCTTATATCATCATCTCATATCCCCAAATTTTTATCTTATAATTAGTATGTGCTATATGTATCAAAGTGCTTTTTTAAATGCTTAAATCACTTTTAATTTTCTTCTCAATATCCACTC

Coding sequence (CDS)

ATGTTAGAAGGGAAAGCAATCATCGGAGAAACGGATATGCTGGAGGCCATGCAACAAGACGCTTTGAACCTTGCATCTAAGGCACTTGACAGTTTTGATGTCACTGAAGCCACTGACATCGCCCGTTTCATTAAAAAGGAATTTGACAGGACATATGGGGGAGGATGGCAATGCATAGTGGGGACAGATTTTGGATCATTTGTGACACACTGTTTTGGATGCTTCATTTACTTTTGTGTTGGAAGTCTTGCAGTTTTGCTCTTTAGAGGTTCTGCTGCCTCTCAAGAACAACAATTAGTACCTGACCCATCAACTCATCACTTTTCTCTTATCGACACTCTCAAACCATGA

Protein sequence

MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLVPDPSTHHFSLIDTLKP

Homology

[Close]

BLAST of Cmc04g0095261 vs. NCBI nr
Match: XP_008454627.1 (PREDICTED: dynein light chain LC6, flagellar outer arm [Cucumis melo] >KAA0036763.1 dynein light chain LC6, flagellar outer arm [Cucumis melo var. makuwa] >TYJ95832.1 dynein light chain LC6, flagellar outer arm [Cucumis melo var. makuwa])

HSP 1 Score: 237.7 bits (605), Expect = 5.2e-59
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV 60
           MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV
Sbjct: 1   MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV 60

Query: 61  GTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLVPDPSTHHFSLIDTLKP 117
           GTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLVPDPSTHHFSLIDTLKP
Sbjct: 61  GTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLVPDPSTHHFSLIDTLKP 116

[Close]

BLAST of Cmc04g0095261 vs. NCBI nr
Match: XP_004146843.1 (dynein light chain 2, cytoplasmic [Cucumis sativus] >KAE8651306.1 hypothetical protein Csa_000829 [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 1.8e-51
Identity = 105/117 (89.74%), Postives = 112/117 (95.73%), Query Frame = 0


Query: 1   MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV 60
           MLEGKAI+GETDMLEAMQQDALNLA+KALDSFDVTEATDIARFIKKEFDR +GGGWQCIV
Sbjct: 1   MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIV 60

Query: 61  GTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLVPDPSTHHFSLID-TLKP 117
           GTDFGSFVTHCFGCFIYFCVGSLA+LLFRGSAASQ+QQ  P+P THHFSL+D TLKP
Sbjct: 61  GTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQFPEP-THHFSLMDNTLKP 116

[Close]

BLAST of Cmc04g0095261 vs. NCBI nr
Match: XP_038899068.1 (dynein light chain 2, cytoplasmic [Benincasa hispida])

HSP 1 Score: 198.7 bits (504), Expect = 2.7e-47
Identity = 97/115 (84.35%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV 60
           MLEGKAIIGETDML+AMQQDALNLA+KALDSFDVTEATDIARFIKKEFD+ YGGGWQCIV
Sbjct: 1   MLEGKAIIGETDMLQAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDKIYGGGWQCIV 60

Query: 61  GTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLVPDPSTHHFSLIDTLK 116
           GTDFGSFVTHCFGCFIYFCVGSLA+LLFRGSAAS+E+Q    P    FS+++TLK
Sbjct: 61  GTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQ---QPQPTQFSVMETLK 112

[Close]

BLAST of Cmc04g0095261 vs. NCBI nr
Match: XP_022941140.1 (dynein light chain 2, cytoplasmic-like [Cucurbita moschata])

HSP 1 Score: 187.6 bits (475), Expect = 6.2e-44
Identity = 92/115 (80.00%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 1   MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV 60
           MLEGKAI+GETDML+AMQQDAL+LA+KALD FDVTEATDIARFIKKEFDRT+GGGWQCIV
Sbjct: 1   MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDVTEATDIARFIKKEFDRTHGGGWQCIV 60

Query: 61  GTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLVPDPSTHHFSLIDTLK 116
           GTDFGSFVTHCFGCFIYFCVGSLA+LLFRGS A Q+      P   HF+  +TLK
Sbjct: 61  GTDFGSFVTHCFGCFIYFCVGSLAILLFRGSDAPQQH-----PHPTHFAASETLK 110

[Close]

BLAST of Cmc04g0095261 vs. NCBI nr
Match: KAG6607846.1 (hypothetical protein SDJN03_01188, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 186.8 bits (473), Expect = 1.1e-43
Identity = 92/115 (80.00%), Postives = 100/115 (86.96%), Query Frame = 0


Query: 1   MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV 60
           MLEGKAI+GETDML+AMQQDAL+LA+KALD FDVTEATDIARFIKKEFDRT+GGGWQCIV
Sbjct: 1   MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDVTEATDIARFIKKEFDRTHGGGWQCIV 60

Query: 61  GTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLVPDPSTHHFSLIDTLK 116
           GTDFGSFVTHCFGCFIYFCVGSLA+LLFRGS A Q+      P   HF   +TLK
Sbjct: 61  GTDFGSFVTHCFGCFIYFCVGSLAILLFRGSDAPQQH-----PHPTHFPASETLK 110

[Close]

BLAST of Cmc04g0095261 vs. ExPASy Swiss-Prot
Match: O02414 (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 6.0e-18
Identity = 48/89 (53.93%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 1  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV 60
          M E KA+I   DM E MQQDA++ A++AL+ F++ +  DIA +IKKEFD+ Y   W CIV
Sbjct: 1  MSERKAVIKNADMPEDMQQDAVDCATQALEKFNIEK--DIAAYIKKEFDKKYNPTWHCIV 60

Query: 61 GTDFGSFVTHCFGCFIYFCVGSLAVLLFR 90
          G +FGS+VTH    FIYF +G +AVLLF+
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAVLLFK 87

[Close]

BLAST of Cmc04g0095261 vs. ExPASy Swiss-Prot
Match: O96860 (Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=Cdlc2 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.0e-17
Identity = 46/89 (51.69%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 1  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV 60
          M + KA+I   DM E MQQDA++ A++AL+ +++ +  DIA FIKKEFD+ Y   W CIV
Sbjct: 1  MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEK--DIAAFIKKEFDKKYNPTWHCIV 60

Query: 61 GTDFGSFVTHCFGCFIYFCVGSLAVLLFR 90
          G +FGS+VTH    FIYF +G +A+LLF+
Sbjct: 61 GRNFGSYVTHETRHFIYFYLGQVAILLFK 87

[Close]

BLAST of Cmc04g0095261 vs. ExPASy Swiss-Prot
Match: Q22799 (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.3e-17
Identity = 44/89 (49.44%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 1  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV 60
          M++ KA+I   DM + MQQDA++ A++AL+ +++ +  DIA +IKKEFD+ Y   W CIV
Sbjct: 1  MVDRKAVIKNADMSDDMQQDAIDCATQALEKYNIEK--DIAAYIKKEFDKKYNPTWHCIV 60

Query: 61 GTDFGSFVTHCFGCFIYFCVGSLAVLLFR 90
          G +FGS+VTH    FIYF +G +A+LLF+
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of Cmc04g0095261 vs. ExPASy Swiss-Prot
Match: Q24117 (Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.3e-17
Identity = 45/89 (50.56%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 1  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV 60
          M + KA+I   DM E MQQDA++ A++AL+ +++ +  DIA +IKKEFD+ Y   W CIV
Sbjct: 1  MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEK--DIAAYIKKEFDKKYNPTWHCIV 60

Query: 61 GTDFGSFVTHCFGCFIYFCVGSLAVLLFR 90
          G +FGS+VTH    FIYF +G +A+LLF+
Sbjct: 61 GRNFGSYVTHETRHFIYFYLGQVAILLFK 87

[Close]

BLAST of Cmc04g0095261 vs. ExPASy Swiss-Prot
Match: Q3MHR3 (Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.1e-17
Identity = 44/89 (49.44%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 1  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV 60
          M + KA+I   DM E MQQDA++ A++A++ +++ +  DIA +IKKEFD+ Y   W CIV
Sbjct: 1  MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEK--DIAAYIKKEFDKKYNPTWHCIV 60

Query: 61 GTDFGSFVTHCFGCFIYFCVGSLAVLLFR 90
          G +FGS+VTH    FIYF +G +A+LLF+
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of Cmc04g0095261 vs. ExPASy TrEMBL
Match: A0A5A7T1H5 (Dynein light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001190 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.5e-59
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV 60
           MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV
Sbjct: 1   MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV 60

Query: 61  GTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLVPDPSTHHFSLIDTLKP 117
           GTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLVPDPSTHHFSLIDTLKP
Sbjct: 61  GTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLVPDPSTHHFSLIDTLKP 116

[Close]

BLAST of Cmc04g0095261 vs. ExPASy TrEMBL
Match: A0A1S3BZU7 (Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103494993 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.5e-59
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV 60
           MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV
Sbjct: 1   MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV 60

Query: 61  GTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLVPDPSTHHFSLIDTLKP 117
           GTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLVPDPSTHHFSLIDTLKP
Sbjct: 61  GTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLVPDPSTHHFSLIDTLKP 116

[Close]

BLAST of Cmc04g0095261 vs. ExPASy TrEMBL
Match: A0A6J1FSQ1 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111446528 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.0e-44
Identity = 92/115 (80.00%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 1   MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV 60
           MLEGKAI+GETDML+AMQQDAL+LA+KALD FDVTEATDIARFIKKEFDRT+GGGWQCIV
Sbjct: 1   MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDVTEATDIARFIKKEFDRTHGGGWQCIV 60

Query: 61  GTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLVPDPSTHHFSLIDTLK 116
           GTDFGSFVTHCFGCFIYFCVGSLA+LLFRGS A Q+      P   HF+  +TLK
Sbjct: 61  GTDFGSFVTHCFGCFIYFCVGSLAILLFRGSDAPQQH-----PHPTHFAASETLK 110

[Close]

BLAST of Cmc04g0095261 vs. ExPASy TrEMBL
Match: A0A6J1J2G7 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111480715 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.5e-43
Identity = 91/115 (79.13%), Postives = 100/115 (86.96%), Query Frame = 0


Query: 1   MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV 60
           MLEGKAI+GETDML+AMQQDAL+LA+KALD FDVTEATDIARFIKKEFDRT+GGGWQCIV
Sbjct: 1   MLEGKAIVGETDMLQAMQQDALDLAAKALDRFDVTEATDIARFIKKEFDRTHGGGWQCIV 60

Query: 61  GTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLVPDPSTHHFSLIDTLK 116
           GTDFGSFVTHCFGCFIYFCVGSLA+LLFRGS A Q+      P   H +  +TLK
Sbjct: 61  GTDFGSFVTHCFGCFIYFCVGSLAILLFRGSDAPQQH-----PHPTHLAASETLK 110

[Close]

BLAST of Cmc04g0095261 vs. ExPASy TrEMBL
Match: A0A0D2M811 (Dynein light chain OS=Gossypium raimondii OX=29730 GN=B456_002G076700 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.6e-42
Identity = 88/115 (76.52%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 1   MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV 60
           MLEGKA++GETDML+ MQQ AL++A+KALD FDVTEAT+IARFIKKEFDR YG GWQCIV
Sbjct: 1   MLEGKAVVGETDMLQTMQQVALDVAAKALDFFDVTEATEIARFIKKEFDRAYGSGWQCIV 60

Query: 61  GTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLVPDPSTHHFSLIDTLK 116
           GTDFGSFVTHC GCFIYFC+GSLA+LLFRGSAA++     PDP  HHFS ++TLK
Sbjct: 61  GTDFGSFVTHCSGCFIYFCIGSLAILLFRGSAATE-----PDP--HHFSALETLK 108

[Close]

BLAST of Cmc04g0095261 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 149.8 bits (377), Expect = 1.3e-36
Identity = 70/91 (76.92%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 1  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV 60
          MLEGKA++G+TDM + M++DAL+LASKALD FDVTE T IARFIKKEFDR+YG GWQCIV
Sbjct: 1  MLEGKAVMGDTDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIV 60

Query: 61 GTDFGSFVTHCFGCFIYFCVGSLAVLLFRGS 92
          GT FGSFVTHC GCFI+F VGSL +LLF+GS
Sbjct: 61 GTHFGSFVTHCSGCFIHFSVGSLTILLFKGS 91

[Close]

BLAST of Cmc04g0095261 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 107.5 bits (267), Expect = 7.5e-24
Identity = 52/91 (57.14%), Postives = 66/91 (72.53%), Query Frame = 0


Query: 1  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV 60
          MLEGKA + ETDM   MQ  A+ +AS++LD FDV ++  IA  IKKEFD  YG GWQC+V
Sbjct: 1  MLEGKAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVV 60

Query: 61 GTDFGSFVTHCFGCFIYFCVGSLAVLLFRGS 92
          GT+FG F TH  G FIYF +G+L  L+F+G+
Sbjct: 61 GTNFGCFFTHSKGTFIYFHLGTLNFLIFKGA 91

[Close]

BLAST of Cmc04g0095261 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 101.3 bits (251), Expect = 5.4e-22
Identity = 49/92 (53.26%), Postives = 65/92 (70.65%), Query Frame = 0


Query: 1  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIV 60
          MLEGKA++ ++DM   MQ  A+  AS+ALD FDV +   IA  IKKEFD  YG GWQC+V
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVV 60

Query: 61 GTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSA 93
          G++FG F TH  G FIYF + +L  L+F+G++
Sbjct: 61 GSNFGCFFTHSKGTFIYFQLETLKFLIFKGAS 92

[Close]

BLAST of Cmc04g0095261 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 77.8 bits (190), Expect = 6.4e-15
Identity = 40/78 (51.28%), Postives = 48/78 (61.54%), Query Frame = 0


Query: 12  DMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHC 71
           DM   MQ  A   A   LDS +   +  +A  +KKEFD+ YG  W CIVG+ FGSFVTH 
Sbjct: 123 DMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFGSFVTHS 182

Query: 72  FGCFIYFCVGSLAVLLFR 90
            GCFIYF +  L VLLF+
Sbjct: 183 TGCFIYFSMDKLYVLLFK 200

[Close]

BLAST of Cmc04g0095261 vs. TAIR 10
Match: AT4G15930.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-14
Identity = 39/85 (45.88%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 5   KAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDF 64
           +A+I   DM + MQ++A+ +A  A + + V +  DIA  IKKEFD+ +G  W CIVG +F
Sbjct: 39  RAVIKSADMKDDMQKEAIEIAISAFEKYSVEK--DIAENIKKEFDKKHGATWHCIVGRNF 98

Query: 65  GSFVTHCFGCFIYFCVGSLAVLLFR 90
           GS+VTH    F+YF +   AVLLF+
Sbjct: 99  GSYVTHETNHFVYFYLDQKAVLLFK 121

The following BLAST results are available for this feature:

BLAST of Cmc04g0095261 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454627.1	5.2e-59	100.00	PREDICTED: dynein light chain LC6, flagellar outer arm [Cucumis melo] >KAA003676...	[more]
XP_004146843.1	1.8e-51	89.74	dynein light chain 2, cytoplasmic [Cucumis sativus] >KAE8651306.1 hypothetical p...	[more]
XP_038899068.1	2.7e-47	84.35	dynein light chain 2, cytoplasmic [Benincasa hispida]	[more]
XP_022941140.1	6.2e-44	80.00	dynein light chain 2, cytoplasmic-like [Cucurbita moschata]	[more]
KAG6607846.1	1.1e-43	80.00	hypothetical protein SDJN03_01188, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cmc04g0095261 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O02414	6.0e-18	53.93	Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=10431...	[more]
O96860	1.0e-17	51.69	Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=Cdlc2 PE...	[more]
Q22799	2.3e-17	49.44	Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=...	[more]
Q24117	2.3e-17	50.56	Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1...	[more]
Q3MHR3	5.1e-17	49.44	Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1	[more]

BLAST of Cmc04g0095261 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T1H5	2.5e-59	100.00	Dynein light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G0...	[more]
A0A1S3BZU7	2.5e-59	100.00	Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103494993 PE=3 SV=1	[more]
A0A6J1FSQ1	3.0e-44	80.00	Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111446528 PE=3 SV=1	[more]
A0A6J1J2G7	1.5e-43	79.13	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111480715 PE=3 SV=1	[more]
A0A0D2M811	1.6e-42	76.52	Dynein light chain OS=Gossypium raimondii OX=29730 GN=B456_002G076700 PE=3 SV=1	[more]

BLAST of Cmc04g0095261 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27360.1	1.3e-36	76.92	Dynein light chain type 1 family protein	[more]
AT3G16120.1	7.5e-24	57.14	Dynein light chain type 1 family protein	[more]
AT1G52240.2	5.4e-22	53.26	RHO guanyl-nucleotide exchange factor 11	[more]
AT5G20110.1	6.4e-15	51.28	Dynein light chain type 1 family protein	[more]
AT4G15930.1	1.1e-14	45.88	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 1..90 e-value: 7.8E-46 score: 168.3
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 6..89 e-value: 1.0E-32 score: 112.3
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 1..97
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 2..90 e-value: 1.3E-31 score: 110.4
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 1..90
None	No IPR available	PANTHER	PTHR11886:SF70	DYNEIN LIGHT CHAIN	coord: 1..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0095261.1	Cmc04g0095261.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005868	cytoplasmic dynein complex
cellular_component	GO:0016020	membrane
cellular_component	GO:0005874	microtubule
cellular_component	GO:0030286	dynein complex
molecular_function	GO:0045505	dynein intermediate chain binding