Cmc04g0087721 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0087721
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Glycine cleavage system H protein
Location	CMiso1.1chr04: 618141 .. 620484 (+)
RNA-Seq Expression	Cmc04g0087721
Synteny	Cmc04g0087721

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGTATAGATTAGGCAGTCACTGCCCACCATCCATCGAAGATAAAGCAATGTCGTAAAACAAAAGTTTCAAACATTTCTTTTATTCTTTGCTGTTACCAAAACAGAGAAGGAAGAACAACAGAACAGAGCAAATCAAACAAAAAAAAGAAAAGAAGAAGAAGTAGCTATGGCTCTTAGAATGTGGGCTTCTTCTACTGCTAATGCACTCAAACTCTCTTCTTCATCTAAAACCCATCTCTCTCCTTCATTCTCTCTCTCCAGATGCTTCTCTACTGGTAACTTTTTGCTCTTTCCTATTTTGCATGTAAACTGTCTGTGTGAATGCCTCTGTGAAGTTTGGGTTTGTTTTTTTTACTCTCTTGGATATCGTTTTTGTGCTGTTGTGTTGTTTAACTCTCAATTATTTTTTATTTCTTATCTGGGTATATTGAAAGAGGGTTTTTTTTTTTTTTAATATAATTTTGCTTATTGGTTGCATTTGTAGTTTTGGATGGGCTGAAGTATGCTTCGTCACATGAGTGGGTGAAGCATGAAGGCTCTGTTGCTACCGTTGGCATCACTGACCATGCTCAGGTGCTTTCTACTTTTTCCATGAAATATATCATTTTTCAAATAATGTAACTCTTGTTGCCTAAATTTTTTGGTGAAATTGTAAGTTTGAGACATGAACTTTTAAAATTGTGTCTATTGAGTCTCCTTATTTGAAAAGTTCATAATAACTGTTTCTTGAGAAAGTTGTTAATAGATCTTTTAAGCCTCTCTTCCTTTTCAATTTTCTGTCTTATAGGCTTACATTTCTAACTTCGCTACTTTAACGGCGACGTGATAGGTTGACTATAAGGGGGTTGCATTGAAAATCAATCCATGTCATGTTAATGTCAAACGAATTAATTGTTGGGCCATATTGGAACAAAATTGAATGTTTTGAGATCTGTTAGACACTTTTTAAAAATATGGGAGTAATGAGACCCAATGACCGAGCTTTATAATTTTACCTAAATTTAACGACTTCGAATGATGGTTGGATAAGGAAACGTCGACAGTTACACAATTCCTTTTGCTGTTACTCCCTCCAGCCATGGGAACTGATTCAAGCTTTTGTTATAACAACTGTTACATCACTCCATGATAGAAATTTTGCATTTATTATACTTGGTATTCAAACTTGGGTTGGAAGCATTTTGTCTTCGTGCATCTTAACAGGATCATCTGGGAGAAGTGGTGTTTGTGGATCTGCCAGAATCAGGCAGTTCAGTTTCTCAAGGTAAGAGCTTTGGAGCAGTGGAGAGTGTGAAAGCAACTAGTGATATCAACTCCCCAATCTCTGGTGAGATTGTTGAAGTTAACCCGCAGCTTAAGGAAACTCCTGGTTTGGTAAGTCCAAATCCTCTTTTTTTTTTTTTTTTTACAATTCCTTGGACTTCGTATTTGCTTCATAGACTGTTATATAGTTGGTAAAATTGCAGTTCCAGTTCTCGTATTCTGCTAAATCTAATGTTTTCATTTGTAGGCTTCCGTTCCATCTGTTTCGATTTGGTTCATGTACTTAATCTAGTCTTTGTCCCTAGATATTAAACATTTGGATTAGGTTATCACATTCGTAAAACTGTAGAGTATAAATGAAACAAAAGAAAGCATATAAATTACATGTTACAAAAAGATGTAGGGGTTGGAATGCCTTGAATCTGTTTTCTAACACTTCTAATTGTTGAAGTTACGTTTCCAACACTAATGACTAGACATAGGGTCTCACTTATTTGATATTCCCACTGCTCACCCCTACCGTAAACATAGCTAACACATTCTTACTAAGTCACTTAAACCTCTGTGTCAATTTCTTCATGTTGCTTATTTTTTGTTTGTGGATTAAGTATGTTATTGATTTATTTACTTCCATGTTCATGAAATGAAGATCAATTCAAGTCCATATGAAGGGGGATGGATGATAAAAGTGAAGCCAAGCAATCCAGGTGAATTAGATTCTTTGCTTGGTCCAAAGGAATATACAAAGTTTTGTGAGGAAGAAGATGCAGCCCACTAAAGCTGAACAAACAAATGTTTCATCTCCAAACAGAGCTTAAGCTAATTTCTTTTCAAAGCTGCTTGAATTGTTGACATATCACAAGCTATTTCTATGAAGAAAGAGAGCCAAAATAATAATTACAAGTCCATTGTGAGTTGAAATGTGCCTAAGCATCTGAACTACATTCTTTCTTCAATGTTTATTCCACTTGAAATTAATTGAATTTCTATGCCTTATTTTTAGCCGTTAACTCTTGAATGTGCTGAATTTGATTGAATTCATGATGCTCCTAACTTTTGAGTTCGATATCTATTTGGTTG

mRNA sequence

GTGTATAGATTAGGCAGTCACTGCCCACCATCCATCGAAGATAAAGCAATGTCGTAAAACAAAAGTTTCAAACATTTCTTTTATTCTTTGCTGTTACCAAAACAGAGAAGGAAGAACAACAGAACAGAGCAAATCAAACAAAAAAAAGAAAAGAAGAAGAAGTAGCTATGGCTCTTAGAATGTGGGCTTCTTCTACTGCTAATGCACTCAAACTCTCTTCTTCATCTAAAACCCATCTCTCTCCTTCATTCTCTCTCTCCAGATGCTTCTCTACTGTTTTGGATGGGCTGAAGTATGCTTCGTCACATGAGTGGGTGAAGCATGAAGGCTCTGTTGCTACCGTTGGCATCACTGACCATGCTCAGGATCATCTGGGAGAAGTGGTGTTTGTGGATCTGCCAGAATCAGGCAGTTCAGTTTCTCAAGGTAAGAGCTTTGGAGCAGTGGAGAGTGTGAAAGCAACTAGTGATATCAACTCCCCAATCTCTGGTGAGATTGTTGAAGTTAACCCGCAGCTTAAGGAAACTCCTGGTTTGATCAATTCAAGTCCATATGAAGGGGGATGGATGATAAAAGTGAAGCCAAGCAATCCAGGTGAATTAGATTCTTTGCTTGGTCCAAAGGAATATACAAAGTTTTGTGAGGAAGAAGATGCAGCCCACTAAAGCTGAACAAACAAATGTTTCATCTCCAAACAGAGCTTAAGCTAATTTCTTTTCAAAGCTGCTTGAATTGTTGACATATCACAAGCTATTTCTATGAAGAAAGAGAGCCAAAATAATAATTACAAGTCCATTGTGAGTTGAAATGTGCCTAAGCATCTGAACTACATTCTTTCTTCAATGTTTATTCCACTTGAAATTAATTGAATTTCTATGCCTTATTTTTAGCCGTTAACTCTTGAATGTGCTGAATTTGATTGAATTCATGATGCTCCTAACTTTTGAGTTCGATATCTATTTGGTTG

Coding sequence (CDS)

ATGGCTCTTAGAATGTGGGCTTCTTCTACTGCTAATGCACTCAAACTCTCTTCTTCATCTAAAACCCATCTCTCTCCTTCATTCTCTCTCTCCAGATGCTTCTCTACTGTTTTGGATGGGCTGAAGTATGCTTCGTCACATGAGTGGGTGAAGCATGAAGGCTCTGTTGCTACCGTTGGCATCACTGACCATGCTCAGGATCATCTGGGAGAAGTGGTGTTTGTGGATCTGCCAGAATCAGGCAGTTCAGTTTCTCAAGGTAAGAGCTTTGGAGCAGTGGAGAGTGTGAAAGCAACTAGTGATATCAACTCCCCAATCTCTGGTGAGATTGTTGAAGTTAACCCGCAGCTTAAGGAAACTCCTGGTTTGATCAATTCAAGTCCATATGAAGGGGGATGGATGATAAAAGTGAAGCCAAGCAATCCAGGTGAATTAGATTCTTTGCTTGGTCCAAAGGAATATACAAAGTTTTGTGAGGAAGAAGATGCAGCCCACTAA

Protein sequence

MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKETPGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH

Homology

[Close]

BLAST of Cmc04g0087721 vs. NCBI nr
Match: XP_008465945.1 (PREDICTED: glycine cleavage system H protein, mitochondrial [Cucumis melo])

HSP 1 Score: 327.8 bits (839), Expect = 5.4e-86
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG
Sbjct: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKET 120
           ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKET
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKET 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 165

[Close]

BLAST of Cmc04g0087721 vs. NCBI nr
Match: XP_004148493.1 (glycine cleavage system H protein 3, mitochondrial [Cucumis sativus] >KGN60412.1 hypothetical protein Csa_002081 [Cucumis sativus])

HSP 1 Score: 326.2 bits (835), Expect = 1.6e-85
Identity = 164/165 (99.39%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG
Sbjct: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKET 120
           ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE+
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 165

[Close]

BLAST of Cmc04g0087721 vs. NCBI nr
Match: XP_038876916.1 (glycine cleavage system H protein, mitochondrial [Benincasa hispida])

HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83
Identity = 160/165 (96.97%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANAL+LSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG
Sbjct: 1   MALRMWASSTANALRLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKET 120
           ITDHAQDHLGEVVFVDLPESG SVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE+
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNP ELDSL GPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKFCEEEDAAH 165

[Close]

BLAST of Cmc04g0087721 vs. NCBI nr
Match: XP_023532627.1 (glycine cleavage system H protein 3, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312.0 bits (798), Expect = 3.1e-81
Identity = 154/165 (93.33%), Postives = 160/165 (96.97%), Query Frame = 0


Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANAL+LSSSSKTHLSP FS+SRCFSTVLDGLKYASSHEWVKHEG VAT+G
Sbjct: 1   MALRMWASSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVATIG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKET 120
           ITDHAQDHLGEVVFVDLPESG+ VSQGKSFGAVESVKATSDINSPISGEIVEVNPQLK++
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDS 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNP ELDSL GPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKFCEEEDAAH 165

[Close]

BLAST of Cmc04g0087721 vs. NCBI nr
Match: XP_022931257.1 (glycine cleavage system H protein, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 308.9 bits (790), Expect = 2.6e-80
Identity = 153/165 (92.73%), Postives = 159/165 (96.36%), Query Frame = 0


Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANAL+LSSSSKTHLSP FS+SRCFSTVLDGLKYASSHEWVKHEG VAT+G
Sbjct: 1   MALRMWASSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVATIG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKET 120
           ITDHAQDHLGEVVFVDLPESG+ VSQGKSFGAVESVKATSDINSPISGEIVEVN QLK++
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATSDINSPISGEIVEVNQQLKDS 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNP ELDSL GPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKFCEEEDAAH 165

[Close]

BLAST of Cmc04g0087721 vs. ExPASy Swiss-Prot
Match: P16048 (Glycine cleavage system H protein, mitochondrial OS=Pisum sativum OX=3888 GN=GDCSH PE=1 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.3e-74
Identity = 137/165 (83.03%), Postives = 151/165 (91.52%), Query Frame = 0


Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANALKLSSSS+ HLSP+FS+SRCFS VLDGLKYA SHEWVKHEGSVAT+G
Sbjct: 1   MALRMWASSTANALKLSSSSRLHLSPTFSISRCFSNVLDGLKYAPSHEWVKHEGSVATIG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKET 120
           ITDHAQDHLGEVVFV+LPE G SV++GK FGAVESVKATSD+NSPISGE++EVN  L   
Sbjct: 61  ITDHAQDHLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLTGK 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYE GWMIK+KP++P EL+SLLG KEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEDGWMIKIKPTSPDELESLLGAKEYTKFCEEEDAAH 165

[Close]

BLAST of Cmc04g0087721 vs. ExPASy Swiss-Prot
Match: Q39732 (Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala OX=35877 GN=GDCSH PE=2 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 3.8e-74
Identity = 138/165 (83.64%), Postives = 151/165 (91.52%), Query Frame = 0


Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANAL+LSS+++ H SP   LSRCFS+VLDGLKYA+SHEWVKHEGSVAT+G
Sbjct: 1   MALRMWASSTANALRLSSATRPHFSP---LSRCFSSVLDGLKYANSHEWVKHEGSVATIG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKET 120
           ITDHAQDHLGEVVFVDLPE+G SV++   FGAVESVKATSD+NSPISGEIVEVN +L ET
Sbjct: 61  ITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSET 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYE GWMIKVKPSNP ELDSL+G KEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDAAH 162

[Close]

BLAST of Cmc04g0087721 vs. ExPASy Swiss-Prot
Match: Q9LQL0 (Glycine cleavage system H protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GDH3 PE=1 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 4.9e-74
Identity = 138/166 (83.13%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 1   MALRMWASSTANALKLSSS-SKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATV 60
           MALRMWASSTANALKLSSS SK+HL P+FS+SRCFS+VL+GLKYA+SHEWVKHEGSVAT+
Sbjct: 1   MALRMWASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVATI 60

Query: 61  GITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE 120
           GITDHAQDHLGEVVFV+LPE+ SSVS+ KSFGAVESVKATS+I SPISGE++EVN +L E
Sbjct: 61  GITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLTE 120

Query: 121 TPGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           +PGLINSSPYE GWMIKVKPS+P EL++L+GPKEYTKFCEEEDAAH
Sbjct: 121 SPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166

[Close]

BLAST of Cmc04g0087721 vs. ExPASy Swiss-Prot
Match: P49359 (Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei OX=4226 GN=GDCSH PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.5e-73
Identity = 136/165 (82.42%), Postives = 151/165 (91.52%), Query Frame = 0


Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALR+WASSTANAL+LSS+++ H SP   LSRCFS+VLDGLKYA+SHEWVKHEGSVAT+G
Sbjct: 1   MALRIWASSTANALRLSSATRPHFSP---LSRCFSSVLDGLKYANSHEWVKHEGSVATIG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKET 120
           ITDHAQDHLGEVVFVDLPE+G SV++   FGAVESVKATSD+NSPISGEIVEVN +L ET
Sbjct: 61  ITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSET 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYE GWMIKVKPSNP ELDSL+G KEYTKFCEEED+AH
Sbjct: 121 PGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDSAH 162

[Close]

BLAST of Cmc04g0087721 vs. ExPASy Swiss-Prot
Match: P25855 (Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GDH1 PE=1 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.2e-72
Identity = 140/166 (84.34%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1   MALRMWASSTANALKLSSS-SKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATV 60
           MALRMWASSTANALKLSSS SK+HLSP FS SRCFSTVL+GLKYA+SHEWVKHEGSVAT+
Sbjct: 1   MALRMWASSTANALKLSSSVSKSHLSP-FSFSRCFSTVLEGLKYANSHEWVKHEGSVATI 60

Query: 61  GITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE 120
           GIT HAQDHLGEVVFV+LPE  +SVS+ KSFGAVESVKATS+I SPISGEI+EVN +L E
Sbjct: 61  GITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTE 120

Query: 121 TPGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           +PGLINSSPYE GWMIKVKPS+P EL+SL+GPKEYTKFCEEEDAAH
Sbjct: 121 SPGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165

[Close]

BLAST of Cmc04g0087721 vs. ExPASy TrEMBL
Match: A0A1S3CQ17 (Glycine cleavage system H protein OS=Cucumis melo OX=3656 GN=LOC103503516 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.6e-86
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG
Sbjct: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKET 120
           ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKET
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKET 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 165

[Close]

BLAST of Cmc04g0087721 vs. ExPASy TrEMBL
Match: A0A0A0LI67 (Glycine cleavage system H protein OS=Cucumis sativus OX=3659 GN=Csa_3G903520 PE=3 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 7.6e-86
Identity = 164/165 (99.39%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG
Sbjct: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKET 120
           ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE+
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 165

[Close]

BLAST of Cmc04g0087721 vs. ExPASy TrEMBL
Match: A0A6J1ET51 (Glycine cleavage system H protein OS=Cucurbita moschata OX=3662 GN=LOC111437487 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 153/165 (92.73%), Postives = 159/165 (96.36%), Query Frame = 0


Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANAL+LSSSSKTHLSP FS+SRCFSTVLDGLKYASSHEWVKHEG VAT+G
Sbjct: 1   MALRMWASSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVATIG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKET 120
           ITDHAQDHLGEVVFVDLPESG+ VSQGKSFGAVESVKATSDINSPISGEIVEVN QLK++
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATSDINSPISGEIVEVNQQLKDS 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNP ELDSL GPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKFCEEEDAAH 165

[Close]

BLAST of Cmc04g0087721 vs. ExPASy TrEMBL
Match: A0A6J1I8M1 (Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111470652 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.2e-80
Identity = 154/165 (93.33%), Postives = 158/165 (95.76%), Query Frame = 0


Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANAL+LSS+SKTHLS  FSLSRCFSTVLDGLKYASSHEWVKHEG VATVG
Sbjct: 1   MALRMWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKET 120
           ITDHAQDHLGEVVFVDLPESG SVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLK++
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDS 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNP ELDSL GPKEYTK CEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 165

[Close]

BLAST of Cmc04g0087721 vs. ExPASy TrEMBL
Match: A0A6J1GKG7 (Glycine cleavage system H protein OS=Cucurbita moschata OX=3662 GN=LOC111455190 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.2e-80
Identity = 154/165 (93.33%), Postives = 158/165 (95.76%), Query Frame = 0


Query: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANAL+LSS+SKTHLS  FSLSRCFSTVLDGLKYASSHEWVKHEG VATVG
Sbjct: 1   MALRMWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKET 120
           ITDHAQDHLGEVVFVDLPESG SVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLK++
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDS 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNP ELDSL GPKEYTK CEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 165

[Close]

BLAST of Cmc04g0087721 vs. TAIR 10
Match: AT1G32470.1 (Single hybrid motif superfamily protein )

HSP 1 Score: 278.5 bits (711), Expect = 3.5e-75
Identity = 138/166 (83.13%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 1   MALRMWASSTANALKLSSS-SKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATV 60
           MALRMWASSTANALKLSSS SK+HL P+FS+SRCFS+VL+GLKYA+SHEWVKHEGSVAT+
Sbjct: 1   MALRMWASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVATI 60

Query: 61  GITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE 120
           GITDHAQDHLGEVVFV+LPE+ SSVS+ KSFGAVESVKATS+I SPISGE++EVN +L E
Sbjct: 61  GITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLTE 120

Query: 121 TPGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           +PGLINSSPYE GWMIKVKPS+P EL++L+GPKEYTKFCEEEDAAH
Sbjct: 121 SPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166

[Close]

BLAST of Cmc04g0087721 vs. TAIR 10
Match: AT2G35370.1 (glycine decarboxylase complex H )

HSP 1 Score: 273.9 bits (699), Expect = 8.7e-74
Identity = 140/166 (84.34%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1   MALRMWASSTANALKLSSS-SKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATV 60
           MALRMWASSTANALKLSSS SK+HLSP FS SRCFSTVL+GLKYA+SHEWVKHEGSVAT+
Sbjct: 1   MALRMWASSTANALKLSSSVSKSHLSP-FSFSRCFSTVLEGLKYANSHEWVKHEGSVATI 60

Query: 61  GITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE 120
           GIT HAQDHLGEVVFV+LPE  +SVS+ KSFGAVESVKATS+I SPISGEI+EVN +L E
Sbjct: 61  GITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTE 120

Query: 121 TPGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           +PGLINSSPYE GWMIKVKPS+P EL+SL+GPKEYTKFCEEEDAAH
Sbjct: 121 SPGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165

[Close]

BLAST of Cmc04g0087721 vs. TAIR 10
Match: AT2G35120.1 (Single hybrid motif superfamily protein )

HSP 1 Score: 195.7 bits (496), Expect = 3.0e-50
Identity = 103/166 (62.05%), Postives = 128/166 (77.11%), Query Frame = 0


Query: 1   MALRM-WASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATV 60
           MA R+ WAS  A+ L++S + +      FS     S VL  LKYA SHEWVK +G+ AT 
Sbjct: 1   MACRLFWASRVASHLRISVAQR-----GFS-----SVVLKDLKYADSHEWVKIDGNKATF 60

Query: 61  GITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE 120
           GITDHAQDHLG+VV+V+LP+ G SVSQGKSFGAVESVKATSDINSP+SG++VEVN +L E
Sbjct: 61  GITDHAQDHLGDVVYVELPDVGHSVSQGKSFGAVESVKATSDINSPVSGKVVEVNEELTE 120

Query: 121 TPGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 166
           +PGL+NSSPYE GW+IKV+ S+ GE + L+   +Y+KFCEEEDA H
Sbjct: 121 SPGLVNSSPYEQGWIIKVELSDAGEAEKLMDSDKYSKFCEEEDAKH 156

The following BLAST results are available for this feature:

BLAST of Cmc04g0087721 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465945.1	5.4e-86	100.00	PREDICTED: glycine cleavage system H protein, mitochondrial [Cucumis melo]	[more]
XP_004148493.1	1.6e-85	99.39	glycine cleavage system H protein 3, mitochondrial [Cucumis sativus] >KGN60412.1...	[more]
XP_038876916.1	1.5e-83	96.97	glycine cleavage system H protein, mitochondrial [Benincasa hispida]	[more]
XP_023532627.1	3.1e-81	93.33	glycine cleavage system H protein 3, mitochondrial-like [Cucurbita pepo subsp. p...	[more]
XP_022931257.1	2.6e-80	92.73	glycine cleavage system H protein, mitochondrial-like [Cucurbita moschata]	[more]

BLAST of Cmc04g0087721 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P16048	1.3e-74	83.03	Glycine cleavage system H protein, mitochondrial OS=Pisum sativum OX=3888 GN=GDC...	[more]
Q39732	3.8e-74	83.64	Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala OX=35877 GN...	[more]
Q9LQL0	4.9e-74	83.13	Glycine cleavage system H protein 3, mitochondrial OS=Arabidopsis thaliana OX=37...	[more]
P49359	2.5e-73	82.42	Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei OX=4226 GN...	[more]
P25855	1.2e-72	84.34	Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana OX=37...	[more]

BLAST of Cmc04g0087721 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CQ17	2.6e-86	100.00	Glycine cleavage system H protein OS=Cucumis melo OX=3656 GN=LOC103503516 PE=3 S...	[more]
A0A0A0LI67	7.6e-86	99.39	Glycine cleavage system H protein OS=Cucumis sativus OX=3659 GN=Csa_3G903520 PE=...	[more]
A0A6J1ET51	1.3e-80	92.73	Glycine cleavage system H protein OS=Cucurbita moschata OX=3662 GN=LOC111437487 ...	[more]
A0A6J1I8M1	2.2e-80	93.33	Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111470652 PE...	[more]
A0A6J1GKG7	2.2e-80	93.33	Glycine cleavage system H protein OS=Cucurbita moschata OX=3662 GN=LOC111455190 ...	[more]

BLAST of Cmc04g0087721 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32470.1	3.5e-75	83.13	Single hybrid motif superfamily protein	[more]
AT2G35370.1	8.7e-74	84.34	glycine decarboxylase complex H	[more]
AT2G35120.1	3.0e-50	62.05	Single hybrid motif superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.100		coord: 30..161 e-value: 3.0E-54 score: 184.2
None	No IPR available	PANTHER	PTHR11715:SF32	GLYCINE CLEAVAGE SYSTEM H PROTEIN	coord: 1..165
IPR017453	Glycine cleavage system H-protein, subgroup	TIGRFAM	TIGR00527	TIGR00527	coord: 39..162 e-value: 3.8E-46 score: 154.3
IPR033753	Glycine cleavage system H-protein/Simiate	PFAM	PF01597	GCV_H	coord: 41..160 e-value: 7.2E-49 score: 164.7
IPR033753	Glycine cleavage system H-protein/Simiate	CDD	cd06848	GCS_H	coord: 43..137 e-value: 2.40597E-51 score: 157.31
IPR002930	Glycine cleavage system H-protein	PANTHER	PTHR11715	GLYCINE CLEAVAGE SYSTEM H PROTEIN	coord: 1..165
IPR002930	Glycine cleavage system H-protein	HAMAP	MF_00272	GcvH	coord: 38..159 score: 36.315094
IPR003016	2-oxo acid dehydrogenase, lipoyl-binding site	PROSITE	PS00189	LIPOYL	coord: 81..110
IPR000089	Biotin/lipoyl attachment	PROSITE	PS50968	BIOTINYL_LIPOYL	coord: 56..138 score: 27.712023
IPR011053	Single hybrid motif	SUPERFAMILY	51230	Single hybrid motif	coord: 37..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0087721.1	Cmc04g0087721.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019464	glycine decarboxylation via glycine cleavage system
biological_process	GO:0009249	protein lipoylation
cellular_component	GO:0005960	glycine cleavage complex
cellular_component	GO:0005739	mitochondrion