Cmc02g0051731 (gene) Melon (Charmono) v1.1

Overview
NameCmc02g0051731
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr02: 18560673 .. 18562295 (+)
RNA-Seq ExpressionCmc02g0051731
SyntenyCmc02g0051731
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTATTTAAATTTCAAAACTAATGTGCAGCATAAGAAACAACAGCATTGTATCGAACAGGACAACCATGAAACACTTATTTTTACAGCATTAACAAACAGAAACATTTCCTTAGGAAAACTACTCTAAGCGCCGTATTTGACTAGACTTCCAAGACATATTGGTAAAGAAAAATGGCTTATTTGACAAAACTTAAGCCTCCAAGCACTTTGCCAATATAACTAAACCCCTTCCACCCTGCACTTTTAGCAATATAACACACAAAATATTGGCTGCTACCACAAACTCCGTTAGCATTATTCATTGATTGAGATGAACCCTCCCAACAATACGTCAACCACCAAACCCATACCCTACTGCCCAATAAACCACAAATTCTAAAGAAAACAGTCATCTAAGCAAAGCCCTTTTTTCCAATACTGTACTATGGCTACAATATCTCCTCCTTCCACAAAACAATTACATTGAACTGAGATCCAGCACAGGCAAGATAATTACGAAGGCTTCAGAACCAGTTACACATAAGAAGAGATTAATCAAACATAAATTTTGAAGTCTCCCATTGATCAGGGCATCAATAACTATAAGAGGCAAATCAACAAAATGAATAACAATTACAAACAACAAGAGCGAGCATTTGCAACCCAAAAGTGTATTATTCACTAATCCATGAATAATAAACTAACTGTGTAACAATATGAAGAAATAATAATCAAAGAAACCAAATGCTTTACCGTGCAAGTCCTCCCTCTAATTGATACAAATTTGCATAACTTGTTATGCCGATTCTATATCGGCACATATCTCTTAACTGCCTGCTTACCCGCAACTGCAGCTGCAGCAGCAATCCCTCCAATAGCACCGGCGATGGCGGCCGACCTTGGCCCAGACGCCGCCTTATAAACAGCACCAGTCCCCAATCCAGCTACAATACTATTCAAAACATCATCAGAACCTCTCAAATGAATAACCCCACTTTCCAAACCAGCAAAAATCAAGCCAAGGATCCCAAGAGAGTTTCCAGCCCTCCGGCCAAGCTGGCCCCCAGAGTTGAGAACTCGATTGAGACGGAGTTTGACAGAGTCACCGGGCTCAGCTGCCCGGAGGCCCTGAATGGAACCCCTGGCGCCGCCAAGAAGGGCGCCGGAGAGGTAGCCAATTCCGGTGTAGTATTGGAGGTTTTCGCCCCAAGAACGGTGAGGCCTGGCGGCTTCTTCGAAGAAAAGATGCTCGGGGGCGGTGGGGAGCTCGTAGAGCTTGGTGATCGGAACGTGTAGGTCTTGGTAAGGATGATAGAAACGGGTTTTCCGATCATCGGGTGATTTGGAGGAATTTTCCATGGGACGAGGAGAAAGGGATGTTTTGAAGGAACAGAAATTAGGGTTCAGGGTGAGCTGAATCAAAGGTTGAACAGAGAGAAAACAATGGCGAGAAAGAGAGAGAAAAAGAAAGAGAAAGAAATGGTTTGTTTGTTCAAAAAGCTTCAAAGGGTTTGAAAGGGTTTATCGAAGGAAGCTTCGTGAGTAGCGTAGGGTTTAACGCGGAACTAAAAACTAAGACCTAAAGTATAAAAAATAATAAAGGTGTATTTACAGAAATTTAACCTCACACAAAAATGTTTAT

mRNA sequence

TTTTATTTAAATTTCAAAACTAATGTGCAGCATAAGAAACAACAGCATTGTATCGAACAGGACAACCATGAAACACTTATTTTTACAGCATTAACAAACAGAAACATTTCCTTAGGAAAACTACTCTAAGCGCCGTATTTGACTAGACTTCCAAGACATATTGGTAAAGAAAAATGGCTTATTTGACAAAACTTAAGCCTCCAAGCACTTTGCCAATATAACTAAACCCCTTCCACCCTGCACTTTTAGCAATATAACACACAAAATATTGGCTGCTACCACAAACTCCGTTAGCATTATTCATTGATTGAGATGAACCCTCCCAACAATACGTCAACCACCAAACCCATACCCTACTGCCCAATAAACCACAAATTCTAAAGAAAACAGTCATCTAAGCAAAGCCCTTTTTTCCAATACTGTACTATGGCTACAATATCTCCTCCTTCCACAAAACAATTACATTGAACTGAGATCCAGCACAGGCAAGATAATTACGAAGGCTTCAGAACCAGTTACACATAAGAAGAGATTAATCAAACATAAATTTTGAAGTCTCCCATTGATCAGGGCATCAATAACTATAAGAGGCAAATCAACAAAATGAATAACAATTACAAACAACAAGAGCGAGCATTTGCAACCCAAAAGTGTATTATTCACTAATCCATGAATAATAAACTAACTGTGTAACAATATGAAGAAATAATAATCAAAGAAACCAAATGCTTTACCGTGCAAGTCCTCCCTCTAATTGATACAAATTTGCATAACTTGTTATGCCGATTCTATATCGGCACATATCTCTTAACTGCCTGCTTACCCGCAACTGCAGCTGCAGCAGCAATCCCTCCAATAGCACCGGCGATGGCGGCCGACCTTGGCCCAGACGCCGCCTTATAAACAGCACCAGTCCCCAATCCAGCTACAATACTATTCAAAACATCATCAGAACCTCTCAAATGAATAACCCCACTTTCCAAACCAGCAAAAATCAAGCCAAGGATCCCAAGAGAGTTTCCAGCCCTCCGGCCAAGCTGGCCCCCAGAGTTGAGAACTCGATTGAGACGGAGTTTGACAGAGTCACCGGGCTCAGCTGCCCGGAGGCCCTGAATGGAACCCCTGGCGCCGCCAAGAAGGGCGCCGGAGAGGTAGCCAATTCCGGTGTAGTATTGGAGGTTTTCGCCCCAAGAACGGTGAGGCCTGGCGGCTTCTTCGAAGAAAAGATGCTCGGGGGCGGTGGGGAGCTCGTAGAGCTTGGTGATCGGAACGTGTAGGTCTTGGTAAGGATGATAGAAACGGGTTTTCCGATCATCGGGTGATTTGGAGGAATTTTCCATGGGACGAGGAGAAAGGGATGTTTTGAAGGAACAGAAATTAGGGTTCAGGGTGAGCTGAATCAAAGGTTGAACAGAGAGAAAACAATGGCGAGAAAGAGAGAGAAAAAGAAAGAGAAAGAAATGGTTTGTTTGTTCAAAAAGCTTCAAAGGGTTTGAAAGGGTTTATCGAAGGAAGCTTCGTGAGTAGCGTAGGGTTTAACGCGGAACTAAAAACTAAGACCTAAAGTATAAAAAATAATAAAGGTGTATTTACAGAAATTTAACCTCACACAAAAATGTTTAT

Coding sequence (CDS)

ATGCCGATTCTATATCGGCACATATCTCTTAACTGCCTGCTTACCCGCAACTGCAGCTGCAGCAGCAATCCCTCCAATAGCACCGGCGATGGCGGCCGACCTTGGCCCAGACGCCGCCTTATAAACAGCACCAGTCCCCAATCCAGCTACAATACTATTCAAAACATCATCAGAACCTCTCAAATGAATAACCCCACTTTCCAAACCAGCAAAAATCAAGCCAAGGATCCCAAGAGAGTTTCCAGCCCTCCGGCCAAGCTGGCCCCCAGAGTTGAGAACTCGATTGAGACGGAGTTTGACAGAGTCACCGGGCTCAGCTGCCCGGAGGCCCTGAATGGAACCCCTGGCGCCGCCAAGAAGGGCGCCGGAGAGGTAGCCAATTCCGGTGTAGTATTGGAGGTTTTCGCCCCAAGAACGGTGAGGCCTGGCGGCTTCTTCGAAGAAAAGATGCTCGGGGGCGGTGGGGAGCTCGTAGAGCTTGGTGATCGGAACGTGTAG

Protein sequence

MPILYRHISLNCLLTRNCSCSSNPSNSTGDGGRPWPRRRLINSTSPQSSYNTIQNIIRTSQMNNPTFQTSKNQAKDPKRVSSPPAKLAPRVENSIETEFDRVTGLSCPEALNGTPGAAKKGAGEVANSGVVLEVFAPRTVRPGGFFEEKMLGGGGELVELGDRNV
Homology
[Close]
BLAST of Cmc02g0051731 vs. NCBI nr
Match: KAB8089880.1 (hypothetical protein EE612_014913, partial [Oryza sativa])

HSP 1 Score: 57.8 bits (138), Expect = 1.0e-04
Identity = 37/88 (42.05%), Postives = 46/88 (52.27%), Query Frame = 0 

Query: 73  QAKDPKRVSSPPAKLAPRVENSIETEFDRVTGLSCPEALNGTPGAAKKGAGEVANSGVVL 132
           QA DP+RV    A  A RVE+++  +   V GL     +    G A  GA EVA +GVV 
Sbjct: 39  QADDPERVPHAAAVAAARVEDAVRPDLGGVPGLGVARGVAEADGGAGDGAREVAYAGVVG 98

Query: 133 EVFAPRTVRPGGFFEEKMLGGGGELVEL 161
           EV AP          E+ L GGGE+VEL
Sbjct: 99  EVLAPGAALGERLLLEEELRGGGEVVEL 126

[Close]
BLAST of Cmc02g0051731 vs. NCBI nr
Match: BAS81962.1 (Os03g0114950, partial [Oryza sativa Japonica Group])

HSP 1 Score: 57.8 bits (138), Expect = 1.0e-04
Identity = 37/88 (42.05%), Postives = 46/88 (52.27%), Query Frame = 0 

Query: 73  QAKDPKRVSSPPAKLAPRVENSIETEFDRVTGLSCPEALNGTPGAAKKGAGEVANSGVVL 132
           QA DP+RV    A  A RVE+++  +   V GL     +    G A  GA EVA +GVV 
Sbjct: 39  QADDPERVPHAAAVAAARVEDAVRPDLGGVPGLGVARGVAEADGGAGDGAREVAYAGVVG 98

Query: 133 EVFAPRTVRPGGFFEEKMLGGGGELVEL 161
           EV AP          E+ L GGGE+VEL
Sbjct: 99  EVLAPGAALGERLLLEEELRGGGEVVEL 126

[Close]
BLAST of Cmc02g0051731 vs. ExPASy TrEMBL
Match: A0A0A0LY52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690360 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.6e-49
Identity = 102/104 (98.08%), Postives = 103/104 (99.04%), Query Frame = 0 

Query: 62  MNNPTFQTSKNQAKDPKRVSSPPAKLAPRVENSIETEFDRVTGLSCPEALNGTPGAAKKG 121
           MNNPTFQTSKNQAKDPKRVSSPPAKLAPRVENSIETEFDRVT LSCPEALNGTPGAAKKG
Sbjct: 1   MNNPTFQTSKNQAKDPKRVSSPPAKLAPRVENSIETEFDRVTRLSCPEALNGTPGAAKKG 60

Query: 122 AGEVANSGVVLEVFAPRTVRPGGFFEEKMLGGGGELVELGDRNV 166
           AGEVANSGV+LEVFAPRTVRPGGFFEEKMLGGGGELVELGDRNV
Sbjct: 61  AGEVANSGVILEVFAPRTVRPGGFFEEKMLGGGGELVELGDRNV 104

[Close]
BLAST of Cmc02g0051731 vs. ExPASy TrEMBL
Match: A0A0P0VS74 (Os03g0114950 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0114950 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 5.1e-05
Identity = 37/88 (42.05%), Postives = 46/88 (52.27%), Query Frame = 0 

Query: 73  QAKDPKRVSSPPAKLAPRVENSIETEFDRVTGLSCPEALNGTPGAAKKGAGEVANSGVVL 132
           QA DP+RV    A  A RVE+++  +   V GL     +    G A  GA EVA +GVV 
Sbjct: 39  QADDPERVPHAAAVAAARVEDAVRPDLGGVPGLGVARGVAEADGGAGDGAREVAYAGVVG 98

Query: 133 EVFAPRTVRPGGFFEEKMLGGGGELVEL 161
           EV AP          E+ L GGGE+VEL
Sbjct: 99  EVLAPGAALGERLLLEEELRGGGEVVEL 126

The following BLAST results are available for this feature:
BLAST of Cmc02g0051731 vs. NCBI nr
Match NameE-valueIdentityDescription
KAB8089880.11.0e-0442.05hypothetical protein EE612_014913, partial [Oryza sativa][more]
BAS81962.11.0e-0442.05Os03g0114950, partial [Oryza sativa Japonica Group][more]
BLAST of Cmc02g0051731 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc02g0051731 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LY522.6e-4998.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690360 PE=4 SV=1[more]
A0A0P0VS745.1e-0542.05Os03g0114950 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os03... [more]
BLAST of Cmc02g0051731 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..48

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc02g0051731.1Cmc02g0051731.1mRNA