Cmc02g0048631 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0048631
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr02: 14152570 .. 14154375 (-)
RNA-Seq Expression	Cmc02g0048631
Synteny	Cmc02g0048631

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTCTCGTTTGTCCTCCTTCCACGCCTCCTTCTCTAGTCCTCAACCTTTCTTCACTGACATATCTATTGACCTTTTTCCTCTTTCCGAGTCTCCTCTTGGTAATGAGCTTGCTCAATCTGCACCTACTTCGGTAACCTCGGATCAGTCGTCCATCTCTGATGGTAGTCCTGAACCTACTTCAGACACCCCACCTCGTCGTTCTACTCGGGTAAGGGAACCTCCTATTCATCTCCAAGATTATCACTGTTTTTCCATTATTGTTTCCCTTGTTGAACCTACCTCTTATCAAGAGGCTAGTATTGACCCTTTATGACAGAAAGCGATGAATGATGAATTACAGGCTCTTGAAAAGACGCACACTTGGGACTATGTTGACTTACCTCCTGGTAAAAGACCCATTAGCTGTAAGTGGATCTACAAAATCAAGACTCACTCTGATGGTACTATTGAGCATTATAAGGCTCGTCTTGTAGCAAAAGGGTATTTCCAAGAATATGGTATTGACTATGAAGAAACATTTGCTCCTGTGGCTGAGATGACGTATGTTCGCAGTTTATTAGCTGTTGCTGCTGCCAAGCAGTGGCCTCTTCTTCAGATGGATGTAAAAAATGCTTTTCTTAATGGGACTCTTTCTGAAGAAGTCTATATGAAGCCACCTCCTGGTACTTCTTCTCCTCTTCACAAGGTGTGTCTCTTGCGTCGCGCACTATATGACCTCAAACAGGCTCCACGAGCTTGGTTTGCCACATTTAGCTCTACCATCACTCAACTTGGTTTTACTTCTAGTCCTCATGACACTGCACTCTTTACTCGCCACACACCCCAGGGTATTGTTCTTCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACATGCCATATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGATCTCTCAACTACTTTCTTGGCCTTGAAGTCTCTCGATGCTCGGACGAGTATTTATTATCCCAAGCTAAATATGCCTCTGATCTTTTAGCTCGCTCAGGAATCACTGACTCTAACACAACTTCAACGCCGTTAGATCCCAATGTTCATTTGACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTCTGTATCAGCAACTCGTTGGCCGTCTCATCTATCTAACAGTGACTCGTCCAGACATTGCATATGCTGTTCACATTGTTAGCCAATTTATGGCTGCTCCTCGAACCATCCACTTTACTGCCGTACTACGTATCCTTCGCTATATCAAGGGAACTTTGGGGCATGGACTTCAATTTTCTTCTCAATCCTCTCTCGTATTATTTGGCTATTCTGATGCAGATTGGGCTGGGGATCCCACTGATCGGCGTTCTACAACAGGCTACTGCTTCTACTTAGGCGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCATTCTAGTACTGAATCAGAATATCGCACTCTTGCTGATACTACCGCCGAACTTTTATGGCTTCGTTGGCTTGTTGCTGATATGGGTGTTCCCCAGCAGAGTCCCACTCTCCTTCATTGTGATAATCGTAGTGCCATCCAAATTGCCCACAATGATGTTTTCCATGAGCGTACAAAGCACATCGAAAATGATTGTCACTTCATTCGTCATCATCTCTTGAGTAACACACTTCTTTTGCAACCTGTATCTACCACTGAGCAACCAGCTGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAATTGCGTACCGAACTCAAGCTGACAGCTACTCTACCACCTTGA

mRNA sequence

ATGTTCTCTCGTTTGTCCTCCTTCCACGCCTCCTTCTCTAGTCCTCAACCTTTCTTCACTGACATATCTATTGACCTTTTTCCTCTTTCCGAGTCTCCTCTTGGTAATGAGCTTGCTCAATCTGCACCTACTTCGGTAACCTCGGATCAGTCGTCCATCTCTGATGGTAGTCCTGAACCTACTTCAGACACCCCACCTCGTCGTTCTACTCGGAAAGCGATGAATGATGAATTACAGGCTCTTGAAAAGACGCACACTTGGGACTATGTTGACTTACCTCCTGGTAAAAGACCCATTAGCTGTAAGTGGATCTACAAAATCAAGACTCACTCTGATGGTACTATTGAGCATTATAAGGCTCGTCTTGTAGCAAAAGGGTATTTCCAAGAATATGGTATTGACTATGAAGAAACATTTGCTCCTGTGGCTGAGATGACGTATGTTCGCAGTTTATTAGCTGTTGCTGCTGCCAAGCAGTGGCCTCTTCTTCAGATGGATGTAAAAAATGCTTTTCTTAATGGGACTCTTTCTGAAGAAGTCTATATGAAGCCACCTCCTGGTACTTCTTCTCCTCTTCACAAGGTGTGTCTCTTGCGTCGCGCACTATATGACCTCAAACAGGCTCCACGAGCTTGGTTTGCCACATTTAGCTCTACCATCACTCAACTTGGTTTTACTTCTAGTCCTCATGACACTGCACTCTTTACTCGCCACACACCCCAGGGTATTGTTCTTCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACATGCCATATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGATCTCTCAACTACTTTCTTGGCCTTGAAGTCTCTCGATGCTCGGACGAGTATTTATTATCCCAAGCTAAATATGCCTCTGATCTTTTAGCTCGCTCAGGAATCACTGACTCTAACACAACTTCAACGCCGTTAGATCCCAATGTTCATTTGACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTCTGTATCAGCAACTCGTTGGCCGTCTCATCTATCTAACAGTGACTCGTCCAGACATTGCATATGCTGTTCACATTGTTAGCCAATTTATGGCTGCTCCTCGAACCATCCACTTTACTGCCGTACTACGTATCCTTCGCTATATCAAGGGAACTTTGGGGCATGGACTTCAATTTTCTTCTCAATCCTCTCTCGTATTATTTGGCTATTCTGATGCAGATTGGGCTGGGGATCCCACTGATCGGCGTTCTACAACAGGCTACTGCTTCTACTTAGGCGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCATTCTAGTACTGAATCAGAATATCGCACTCTTGCTGATACTACCGCCGAACTTTTATGGCTTCGTTGGCTTGTTGCTGATATGGGTGTTCCCCAGCAGAGTCCCACTCTCCTTCATTGTGATAATCGTAGTGCCATCCAAATTGCCCACAATGATGTTTTCCATGAGCGTACAAAGCACATCGAAAATGATTGTCACTTCATTCGTCATCATCTCTTGAGTAACACACTTCTTTTGCAACCTGTATCTACCACTGAGCAACCAGCTGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAATTGCGTACCGAACTCAAGCTGACAGCTACTCTACCACCTTGA

Coding sequence (CDS)

ATGTTCTCTCGTTTGTCCTCCTTCCACGCCTCCTTCTCTAGTCCTCAACCTTTCTTCACTGACATATCTATTGACCTTTTTCCTCTTTCCGAGTCTCCTCTTGGTAATGAGCTTGCTCAATCTGCACCTACTTCGGTAACCTCGGATCAGTCGTCCATCTCTGATGGTAGTCCTGAACCTACTTCAGACACCCCACCTCGTCGTTCTACTCGGAAAGCGATGAATGATGAATTACAGGCTCTTGAAAAGACGCACACTTGGGACTATGTTGACTTACCTCCTGGTAAAAGACCCATTAGCTGTAAGTGGATCTACAAAATCAAGACTCACTCTGATGGTACTATTGAGCATTATAAGGCTCGTCTTGTAGCAAAAGGGTATTTCCAAGAATATGGTATTGACTATGAAGAAACATTTGCTCCTGTGGCTGAGATGACGTATGTTCGCAGTTTATTAGCTGTTGCTGCTGCCAAGCAGTGGCCTCTTCTTCAGATGGATGTAAAAAATGCTTTTCTTAATGGGACTCTTTCTGAAGAAGTCTATATGAAGCCACCTCCTGGTACTTCTTCTCCTCTTCACAAGGTGTGTCTCTTGCGTCGCGCACTATATGACCTCAAACAGGCTCCACGAGCTTGGTTTGCCACATTTAGCTCTACCATCACTCAACTTGGTTTTACTTCTAGTCCTCATGACACTGCACTCTTTACTCGCCACACACCCCAGGGTATTGTTCTTCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACATGCCATATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGATCTCTCAACTACTTTCTTGGCCTTGAAGTCTCTCGATGCTCGGACGAGTATTTATTATCCCAAGCTAAATATGCCTCTGATCTTTTAGCTCGCTCAGGAATCACTGACTCTAACACAACTTCAACGCCGTTAGATCCCAATGTTCATTTGACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTCTGTATCAGCAACTCGTTGGCCGTCTCATCTATCTAACAGTGACTCGTCCAGACATTGCATATGCTGTTCACATTGTTAGCCAATTTATGGCTGCTCCTCGAACCATCCACTTTACTGCCGTACTACGTATCCTTCGCTATATCAAGGGAACTTTGGGGCATGGACTTCAATTTTCTTCTCAATCCTCTCTCGTATTATTTGGCTATTCTGATGCAGATTGGGCTGGGGATCCCACTGATCGGCGTTCTACAACAGGCTACTGCTTCTACTTAGGCGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCATTCTAGTACTGAATCAGAATATCGCACTCTTGCTGATACTACCGCCGAACTTTTATGGCTTCGTTGGCTTGTTGCTGATATGGGTGTTCCCCAGCAGAGTCCCACTCTCCTTCATTGTGATAATCGTAGTGCCATCCAAATTGCCCACAATGATGTTTTCCATGAGCGTACAAAGCACATCGAAAATGATTGTCACTTCATTCGTCATCATCTCTTGAGTAACACACTTCTTTTGCAACCTGTATCTACCACTGAGCAACCAGCTGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAATTGCGTACCGAACTCAAGCTGACAGCTACTCTACCACCTTGA

Protein sequence

MFSRLSSFHASFSSPQPFFTDISIDLFPLSESPLGNELAQSAPTSVTSDQSSISDGSPEPTSDTPPRRSTRKAMNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAPVAEMTYVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPLHKVCLLRRALYDLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDEYLLSQAKYASDLLARSGITDSNTTSTPLDPNVHLTPYDGVPLEDVSLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWLVADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTELKLTATLPP

Homology

[Close]

BLAST of Cmc02g0048631 vs. NCBI nr
Match: KAA0050089.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 1087.8 bits (2812), Expect = 0.0e+00
Identity = 543/552 (98.37%), Postives = 544/552 (98.55%), Query Frame = 0


Query: 14  SPQPFFTDISIDLFPLSESPLGNELAQSAPTSVTSDQSSISDGSPEPTSDTPPRRSTRKA 73
           SPQPFFTDISIDLFPLSESPLGNELAQSAPTSVTSDQSSISDGSPEPTSDTPPRRSTR  
Sbjct: 133 SPQPFFTDISIDLFPLSESPLGNELAQSAPTSVTSDQSSISDGSPEPTSDTPPRRSTR-- 192

Query: 74  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGI 133
                 ALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGI
Sbjct: 193 ------ALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGI 252

Query: 134 DYEETFAPVAEMTYVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPLH 193
           DYEETFAPVAEMTYVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPLH
Sbjct: 253 DYEETFAPVAEMTYVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPLH 312

Query: 194 KVCLLRRALYDLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDM 253
           KVCLLRRALYDLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDM
Sbjct: 313 KVCLLRRALYDLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDM 372

Query: 254 IITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDEYLLSQAKYASDLLARSG 313
           IITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDEYLLSQAKYASDLLARSG
Sbjct: 373 IITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDEYLLSQAKYASDLLARSG 432

Query: 314 ITDSNTTSTPLDPNVHLTPYDGVPLEDVSLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA 373
           ITDSNTTSTPLDPNVHLTPYDGVPLEDVSLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA
Sbjct: 433 ITDSNTTSTPLDPNVHLTPYDGVPLEDVSLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA 492

Query: 374 APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYL 433
           APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYL
Sbjct: 493 APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYL 552

Query: 434 GDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWLVADMGVPQQSPTLLHCDNRS 493
           GDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWLVADMGVPQQSPTLLHCDNRS
Sbjct: 553 GDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWLVADMGVPQQSPTLLHCDNRS 612

Query: 494 AIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQL 553
           AIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQL
Sbjct: 613 AIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQL 672

Query: 554 RTELKLTATLPP 566
           RT+LKLTATLPP
Sbjct: 673 RTKLKLTATLPP 676

[Close]

BLAST of Cmc02g0048631 vs. NCBI nr
Match: KAA0037745.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1039.6 bits (2687), Expect = 9.6e-300
Identity = 529/601 (88.02%), Postives = 539/601 (89.68%), Query Frame = 0


Query: 1    MFSRLSSFHASFSSPQPFFTDISIDLFPLSESPLGNELAQSAPTSVTSDQSSISDGSPEP 60
            MFSRLSSFHASFSSPQ FFTD SIDLFPLSES  GNELAQSAPTS TSDQSSISDG+P+P
Sbjct: 734  MFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDP 793

Query: 61   TSDTPPRRSTR------------------------------------KAMNDELQALEKT 120
              D PPRRSTR                                    KAMNDELQALEK 
Sbjct: 794  PPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKM 853

Query: 121  HTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAPVAE 180
            HTWDYVDLPPGKRPI CKWIYKIKTHSDGTIE YKARLVAKGY QEYGIDYEETFAPVA 
Sbjct: 854  HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVAR 913

Query: 181  MTYVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPLHKVCLLRRALYD 240
            MT VRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSP HKVCLLRRALY 
Sbjct: 914  MTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYG 973

Query: 241  LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAIS 300
            LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAIS
Sbjct: 974  LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAIS 1033

Query: 301  DLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDEYLLSQAKYASDLLARSGITDSNTTSTPL 360
            DLQHYLGQHFEMKDLGSLNYFLGLEVSR SD YLLSQAKYASDLLARSGITDSNT STPL
Sbjct: 1034 DLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPL 1093

Query: 361  DPNVHLTPYDGVPLEDVSLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL 420
            DPNVHLTPYDGVPLE+VSLY+QLVG LIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL
Sbjct: 1094 DPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL 1153

Query: 421  RILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK 480
            RILRY+KGTLGHGLQFSSQSSLVL GYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK
Sbjct: 1154 RILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK 1213

Query: 481  QSVVSHSSTESEYRTLADTTAELLWLRWLVADMGVPQQSPTLLHCDNRSAIQIAHNDVFH 540
            QSVVS SSTESEYR LAD TAELLWLRWL+ADMGVPQQ PTLLHCDNRSAIQIAHNDVFH
Sbjct: 1214 QSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFH 1273

Query: 541  ERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTELKLTATLP 566
            ERTKHIENDCHFIRHHLLS+TLLLQ +STTEQPADIFTKALPSTRFNQ+RT+LKLTATLP
Sbjct: 1274 ERTKHIENDCHFIRHHLLSHTLLLQSISTTEQPADIFTKALPSTRFNQIRTKLKLTATLP 1333

[Close]

BLAST of Cmc02g0048631 vs. NCBI nr
Match: KAA0041601.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0065379.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK12000.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1039.6 bits (2687), Expect = 9.6e-300
Identity = 529/601 (88.02%), Postives = 539/601 (89.68%), Query Frame = 0


Query: 1    MFSRLSSFHASFSSPQPFFTDISIDLFPLSESPLGNELAQSAPTSVTSDQSSISDGSPEP 60
            MFSRLSSFHASFSSPQ FFTD SIDLFPLSES  GNELAQSAPTS TSDQSSISDG+P+P
Sbjct: 734  MFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDP 793

Query: 61   TSDTPPRRSTR------------------------------------KAMNDELQALEKT 120
              D PPRRSTR                                    KAMNDELQALEK 
Sbjct: 794  PPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKM 853

Query: 121  HTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAPVAE 180
            HTWDYVDLPPGKRPI CKWIYKIKTHSDGTIE YKARLVAKGY QEYGIDYEETFAPVA 
Sbjct: 854  HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVAR 913

Query: 181  MTYVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPLHKVCLLRRALYD 240
            MT VRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSP HKVCLLRRALY 
Sbjct: 914  MTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYG 973

Query: 241  LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAIS 300
            LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAIS
Sbjct: 974  LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAIS 1033

Query: 301  DLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDEYLLSQAKYASDLLARSGITDSNTTSTPL 360
            DLQHYLGQHFEMKDLGSLNYFLGLEVSR SD YLLSQAKYASDLLARSGITDSNT STPL
Sbjct: 1034 DLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPL 1093

Query: 361  DPNVHLTPYDGVPLEDVSLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL 420
            DPNVHLTPYDGVPLE+VSLY+QLVG LIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL
Sbjct: 1094 DPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL 1153

Query: 421  RILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK 480
            RILRY+KGTLGHGLQFSSQSSLVL GYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK
Sbjct: 1154 RILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK 1213

Query: 481  QSVVSHSSTESEYRTLADTTAELLWLRWLVADMGVPQQSPTLLHCDNRSAIQIAHNDVFH 540
            QSVVS SSTESEYR LAD TAELLWLRWL+ADMGVPQQ PTLLHCDNRSAIQIAHNDVFH
Sbjct: 1214 QSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFH 1273

Query: 541  ERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTELKLTATLP 566
            ERTKHIENDCHFIRHHLLS+TLLLQ +STTEQPADIFTKALPSTRFNQ+RT+LKLTATLP
Sbjct: 1274 ERTKHIENDCHFIRHHLLSHTLLLQSISTTEQPADIFTKALPSTRFNQIRTKLKLTATLP 1333

[Close]

BLAST of Cmc02g0048631 vs. NCBI nr
Match: TYK04714.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1038.1 bits (2683), Expect = 2.8e-299
Identity = 528/601 (87.85%), Postives = 539/601 (89.68%), Query Frame = 0


Query: 1    MFSRLSSFHASFSSPQPFFTDISIDLFPLSESPLGNELAQSAPTSVTSDQSSISDGSPEP 60
            MFSRLSSFHASFSSPQ FFTD SIDLFPLSES  GNELAQSAPTS TSDQSSISDG+P+P
Sbjct: 734  MFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDP 793

Query: 61   TSDTPPRRSTR------------------------------------KAMNDELQALEKT 120
              D PPRRSTR                                    KAMNDELQALEK 
Sbjct: 794  PPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKM 853

Query: 121  HTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAPVAE 180
            HTWDYVDLPPGKRPI CKWIYKIKTHSDGTIE YKARLVAKGY QEYGIDYEETFAPVA 
Sbjct: 854  HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVAR 913

Query: 181  MTYVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPLHKVCLLRRALYD 240
            MT VRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSP HKVCLLRRALY 
Sbjct: 914  MTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYG 973

Query: 241  LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAIS 300
            LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAIS
Sbjct: 974  LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAIS 1033

Query: 301  DLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDEYLLSQAKYASDLLARSGITDSNTTSTPL 360
            DLQHYLGQHFEMKDLGSLNYFLGLEVSR SD YLLSQAKYASDLLARSGITDSNT STPL
Sbjct: 1034 DLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPL 1093

Query: 361  DPNVHLTPYDGVPLEDVSLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL 420
            DPNVHLTPYDGVPLE+VSLY+QLVG LIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL
Sbjct: 1094 DPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL 1153

Query: 421  RILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK 480
            RILRY+KGTLGHGLQFSSQSSLVL GYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK
Sbjct: 1154 RILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK 1213

Query: 481  QSVVSHSSTESEYRTLADTTAELLWLRWLVADMGVPQQSPTLLHCDNRSAIQIAHNDVFH 540
            QSVVS SSTESEYR LAD TAELLWLRWL+ADMGVPQQ PTLLHCDNRSAIQIAHNDVFH
Sbjct: 1214 QSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFH 1273

Query: 541  ERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTELKLTATLP 566
            ERTKHIENDCHFIRHHLLS+TLLLQ +STTEQPADIFTKALPSTRFNQ+RT+LKLTA+LP
Sbjct: 1274 ERTKHIENDCHFIRHHLLSHTLLLQSISTTEQPADIFTKALPSTRFNQIRTKLKLTASLP 1333

[Close]

BLAST of Cmc02g0048631 vs. NCBI nr
Match: KAA0064888.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1035.8 bits (2677), Expect = 1.4e-298
Identity = 530/601 (88.19%), Postives = 537/601 (89.35%), Query Frame = 0


Query: 1   MFSRLSSFHASFSSPQPFFTDISIDLFPLSESPLGNELAQSAPTSVTSDQSSISDGSPEP 60
           MFSRLSSFH SFSSPQPFFTD SIDLFP SESP+GNELAQSAPTS TS+QSSIS GSPEP
Sbjct: 175 MFSRLSSFHTSFSSPQPFFTDTSIDLFPPSESPIGNELAQSAPTSATSNQSSISGGSPEP 234

Query: 61  TSDTPPRRSTR------------------------------------KAMNDELQALEKT 120
           T DTPPRRSTR                                    KAMNDELQALEKT
Sbjct: 235 TPDTPPRRSTRVREPPIHLQDYHCFSTIISLVEPTSYQEASINPVWQKAMNDELQALEKT 294

Query: 121 HTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAPVAE 180
           HTWDYVDLPPGKRPI CKWIYKIKTHSDGTIE YKARLVAKGY QEYGIDYEETFAPVA 
Sbjct: 295 HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVAR 354

Query: 181 MTYVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPLHKVCLLRRALYD 240
           MT VRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPP GTSSP HKVCLLRRALY 
Sbjct: 355 MTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPSGTSSPPHKVCLLRRALYG 414

Query: 241 LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAIS 300
           LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDP AIS
Sbjct: 415 LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAIS 474

Query: 301 DLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDEYLLSQAKYASDLLARSGITDSNTTSTPL 360
           DLQHYLGQHFEMKDLGSLNYFLGLEVSR SD YLLSQ KYASDLLARSGITDSNT STPL
Sbjct: 475 DLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQTKYASDLLARSGITDSNTASTPL 534

Query: 361 DPNVHLTPYDGVPLEDVSLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL 420
           D NVHLTPYDGVPL++VSLY+QLVG LIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL
Sbjct: 535 DLNVHLTPYDGVPLDEVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL 594

Query: 421 RILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK 480
           RILRYIKGTLGHGLQFSSQSSLVL GYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK
Sbjct: 595 RILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK 654

Query: 481 QSVVSHSSTESEYRTLADTTAELLWLRWLVADMGVPQQSPTLLHCDNRSAIQIAHNDVFH 540
           QSVVS SSTESEYR LADTTAELLWLRWL+ADMG PQQ PTLLHCDNRSAIQIAHNDVFH
Sbjct: 655 QSVVSRSSTESEYRALADTTAELLWLRWLLADMGAPQQGPTLLHCDNRSAIQIAHNDVFH 714

Query: 541 ERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTELKLTATLP 566
           ERTKHIENDCHFIR HLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRT+LKLTATL 
Sbjct: 715 ERTKHIENDCHFIRRHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLL 774

[Close]

BLAST of Cmc02g0048631 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 1.4e-120
Identity = 229/497 (46.08%), Postives = 307/497 (61.77%), Query Frame = 0


Query: 71   RKAMNDELQALEKTHTWDYVDLPPGKRPI-SCKWIYKIKTHSDGTIEHYKARLVAKGYFQ 130
            R AM  E+ A    HTWD V  PP    I  C+WI+  K +SDG++  YKARLVAKGY Q
Sbjct: 969  RNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQ 1028

Query: 131  EYGIDYEETFAPVAEMTYVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPG-- 190
              G+DY ETF+PV + T +R +L VA  + WP+ Q+DV NAFL GTL+++VYM  PPG  
Sbjct: 1029 RPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFI 1088

Query: 191  TSSPLHKVCLLRRALYDLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLL 250
                 + VC LR+ALY LKQAPRAW+    + +  +GF +S  DT+LF     + IV +L
Sbjct: 1089 DKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYML 1148

Query: 251  LYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDEYLLSQAKYASD 310
            +YVDD++ITGNDP  + +    L Q F +KD   L+YFLG+E  R      LSQ +Y  D
Sbjct: 1149 VYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILD 1208

Query: 311  LLARSGITDSNTTSTPLDPNVHLTPYDGVPLEDVSLYQQLVGRLIYLTVTRPDIAYAVHI 370
            LLAR+ +  +   +TP+ P+  L+ Y G  L D + Y+ +VG L YL  TRPDI+YAV+ 
Sbjct: 1209 LLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNR 1268

Query: 371  VSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTT 430
            +SQFM  P   H  A+ RILRY+ GT  HG+     ++L L  YSDADWAGD  D  ST 
Sbjct: 1269 LSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTN 1328

Query: 431  GYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWLVADMGVPQQSPTLL 490
            GY  YLG   ISW SKKQ  V  SSTE+EYR++A+T++E+ W+  L+ ++G+    P ++
Sbjct: 1329 GYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVI 1388

Query: 491  HCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPS 550
            +CDN  A  +  N VFH R KHI  D HFIR+ + S  L +  VST +Q AD  TK L  
Sbjct: 1389 YCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSR 1448

Query: 551  TRFNQLRTELKLTATLP 565
            T F    +++ +T   P
Sbjct: 1449 TAFQNFASKIGVTRVPP 1465

[Close]

BLAST of Cmc02g0048631 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 4.7e-116
Identity = 221/497 (44.47%), Postives = 302/497 (60.76%), Query Frame = 0


Query: 71   RKAMNDELQALEKTHTWDYVDLPPGKRPI-SCKWIYKIKTHSDGTIEHYKARLVAKGYFQ 130
            R+AM  E+ A    HTWD V  PP    I  C+WI+  K +SDG++  YKARLVAKGY Q
Sbjct: 952  RQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQ 1011

Query: 131  EYGIDYEETFAPVAEMTYVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPG-- 190
              G+DY ETF+PV + T +R +L VA  + WP+ Q+DV NAFL GTL++EVYM  PPG  
Sbjct: 1012 RPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFV 1071

Query: 191  TSSPLHKVCLLRRALYDLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLL 250
                   VC LR+A+Y LKQAPRAW+    + +  +GF +S  DT+LF     + I+ +L
Sbjct: 1072 DKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYML 1131

Query: 251  LYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDEYLLSQAKYASD 310
            +YVDD++ITGND   +      L Q F +K+   L+YFLG+E  R      LSQ +Y  D
Sbjct: 1132 VYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLD 1191

Query: 311  LLARSGITDSNTTSTPLDPNVHLTPYDGVPLEDVSLYQQLVGRLIYLTVTRPDIAYAVHI 370
            LLAR+ +  +   +TP+  +  LT + G  L D + Y+ +VG L YL  TRPD++YAV+ 
Sbjct: 1192 LLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNR 1251

Query: 371  VSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTT 430
            +SQ+M  P   H+ A+ R+LRY+ GT  HG+     ++L L  YSDADWAGD  D  ST 
Sbjct: 1252 LSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTN 1311

Query: 431  GYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWLVADMGVPQQSPTLL 490
            GY  YLG   ISW SKKQ  V  SSTE+EYR++A+T++EL W+  L+ ++G+    P ++
Sbjct: 1312 GYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVI 1371

Query: 491  HCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPS 550
            +CDN  A  +  N VFH R KHI  D HFIR+ + S  L +  VST +Q AD  TK L  
Sbjct: 1372 YCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSR 1431

Query: 551  TRFNQLRTELKLTATLP 565
              F     ++ +    P
Sbjct: 1432 VAFQNFSRKIGVIKVPP 1448

[Close]

BLAST of Cmc02g0048631 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.1e-99
Identity = 207/512 (40.43%), Postives = 309/512 (60.35%), Query Frame = 0


Query: 55   DGSPEPTSDT---PPRRSTRKAMNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHS 114
            D  PE   +    P +    KAM +E+++L+K  T+  V+LP GKRP+ CKW++K+K   
Sbjct: 808  DREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDG 867

Query: 115  DGTIEHYKARLVAKGYFQEYGIDYEETFAPVAEMTYVRSLLAVAAAKQWPLLQMDVKNAF 174
            D  +  YKARLV KG+ Q+ GID++E F+PV +MT +R++L++AA+    + Q+DVK AF
Sbjct: 868  DCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAF 927

Query: 175  LNGTLSEEVYMKPPPG--TSSPLHKVCLLRRALYDLKQAPRAWFATFSSTITQLGFTSSP 234
            L+G L EE+YM+ P G   +   H VC L ++LY LKQAPR W+  F S +    +  + 
Sbjct: 928  LHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTY 987

Query: 235  HDTAL-FTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGL 294
             D  + F R +    ++LLLYVDDM+I G D   I+ L+  L + F+MKDLG     LG+
Sbjct: 988  SDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGM 1047

Query: 295  EV--SRCSDEYLLSQAKYASDLLARSGITDSNTTSTPLDPNVHL-------TPYDGVPLE 354
            ++   R S +  LSQ KY   +L R  + ++   STPL  ++ L       T  +   + 
Sbjct: 1048 KIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMA 1107

Query: 355  DVSLYQQLVGRLIYLTV-TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGL 414
             V  Y   VG L+Y  V TRPDIA+AV +VS+F+  P   H+ AV  ILRY++GT G  L
Sbjct: 1108 KVP-YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCL 1167

Query: 415  QFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSHSSTESEYR 474
             F   S  +L GY+DAD AGD  +R+S+TGY F      ISW+SK Q  V+ S+TE+EY 
Sbjct: 1168 CFGG-SDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYI 1227

Query: 475  TLADTTAELLWLRWLVADMGVPQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIR 534
               +T  E++WL+  + ++G+  Q   +++CD++SAI ++ N ++H RTKHI+   H+IR
Sbjct: 1228 AATETGKEMIWLKRFLQELGL-HQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIR 1287

Query: 535  HHLLSNTLLLQPVSTTEQPADIFTKALPSTRF 551
              +   +L +  +ST E PAD+ TK +P  +F
Sbjct: 1288 EMVDDESLKVLKISTNENPADMLTKVVPRNKF 1316

[Close]

BLAST of Cmc02g0048631 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 344.7 bits (883), Expect = 1.9e-93
Identity = 188/500 (37.60%), Postives = 293/500 (58.60%), Query Frame = 0


Query: 67   RRSTRKAMNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKG 126
            + S  +A+N EL A +  +TW     P  K  +  +W++ +K +  G    YKARLVA+G
Sbjct: 903  KSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARG 962

Query: 127  YFQEYGIDYEETFAPVAEMTYVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPP 186
            + Q+Y IDYEETFAPVA ++  R +L++       + QMDVK AFLNGTL EE+YM+ P 
Sbjct: 963  FTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQ 1022

Query: 187  GTSSPLHKVCLLRRALYDLKQAPRAWFATFSSTITQLGFTSSPHDTALF--TRHTPQGIV 246
            G S     VC L +A+Y LKQA R WF  F   + +  F +S  D  ++   +      +
Sbjct: 1023 GISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENI 1082

Query: 247  LLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDEYLLSQAKY 306
             +LLYVDD++I   D   +++ + YL + F M DL  + +F+G+ +    D+  LSQ+ Y
Sbjct: 1083 YVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAY 1142

Query: 307  ASDLLARSGITDSNTTSTPLDPNVHLTPYDGVPLEDVSL-YQQLVGRLIYLTV-TRPDIA 366
               +L++  + + N  STPL   ++    +    ED +   + L+G L+Y+ + TRPD+ 
Sbjct: 1143 VKKILSKFNMENCNAVSTPLPSKINYELLNSD--EDCNTPCRSLIGCLMYIMLCTRPDLT 1202

Query: 367  YAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSL--VLFGYSDADWAGDP 426
             AV+I+S++ +   +  +  + R+LRY+KGT+   L F    +    + GY D+DWAG  
Sbjct: 1203 TAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSE 1262

Query: 427  TDRRSTTGYCFYLGD-SLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWLVADMGV 486
             DR+STTGY F + D +LI W +K+Q+ V+ SSTE+EY  L +   E LWL++L+  + +
Sbjct: 1263 IDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINI 1322

Query: 487  PQQSPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPAD 546
              ++P  ++ DN+  I IA+N   H+R KHI+   HF R  + +N + L+ + T  Q AD
Sbjct: 1323 KLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLAD 1382

Query: 547  IFTKALPSTRFNQLRTELKL 560
            IFTK LP+ RF +LR +L L
Sbjct: 1383 IFTKPLPAARFVELRDKLGL 1400

[Close]

BLAST of Cmc02g0048631 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 7.2e-48
Identity = 103/224 (45.98%), Postives = 141/224 (62.95%), Query Frame = 0


Query: 246 LLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDEYLLSQAKYA 305
           LLLYVDD+++TG+    ++ L   L   F MKDLG ++YFLG+++        LSQ KYA
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 306 SDLLARSGITDSNTTSTPLDPNVHLTPYDGVPLEDVSLYQQLVGRLIYLTVTRPDIAYAV 365
             +L  +G+ D    STPL   ++ +        D S ++ +VG L YLT+TRPDI+YAV
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 366 HIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRS 425
           +IV Q M  P    F  + R+LRY+KGT+ HGL     S L +  + D+DWAG  + RRS
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 426 TTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLW 470
           TTG+C +LG ++ISW +K+Q  VS SSTE+EYR LA T AEL W
Sbjct: 183 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc02g0048631 vs. ExPASy TrEMBL
Match: A0A5A7U9B9 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00800 PE=4 SV=1)

HSP 1 Score: 1087.8 bits (2812), Expect = 0.0e+00
Identity = 543/552 (98.37%), Postives = 544/552 (98.55%), Query Frame = 0


Query: 14  SPQPFFTDISIDLFPLSESPLGNELAQSAPTSVTSDQSSISDGSPEPTSDTPPRRSTRKA 73
           SPQPFFTDISIDLFPLSESPLGNELAQSAPTSVTSDQSSISDGSPEPTSDTPPRRSTR  
Sbjct: 133 SPQPFFTDISIDLFPLSESPLGNELAQSAPTSVTSDQSSISDGSPEPTSDTPPRRSTR-- 192

Query: 74  MNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGI 133
                 ALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGI
Sbjct: 193 ------ALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGI 252

Query: 134 DYEETFAPVAEMTYVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPLH 193
           DYEETFAPVAEMTYVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPLH
Sbjct: 253 DYEETFAPVAEMTYVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPLH 312

Query: 194 KVCLLRRALYDLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDM 253
           KVCLLRRALYDLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDM
Sbjct: 313 KVCLLRRALYDLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDM 372

Query: 254 IITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDEYLLSQAKYASDLLARSG 313
           IITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDEYLLSQAKYASDLLARSG
Sbjct: 373 IITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDEYLLSQAKYASDLLARSG 432

Query: 314 ITDSNTTSTPLDPNVHLTPYDGVPLEDVSLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA 373
           ITDSNTTSTPLDPNVHLTPYDGVPLEDVSLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA
Sbjct: 433 ITDSNTTSTPLDPNVHLTPYDGVPLEDVSLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMA 492

Query: 374 APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYL 433
           APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYL
Sbjct: 493 APRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYL 552

Query: 434 GDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWLVADMGVPQQSPTLLHCDNRS 493
           GDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWLVADMGVPQQSPTLLHCDNRS
Sbjct: 553 GDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWLVADMGVPQQSPTLLHCDNRS 612

Query: 494 AIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQL 553
           AIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQL
Sbjct: 613 AIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQL 672

Query: 554 RTELKLTATLPP 566
           RT+LKLTATLPP
Sbjct: 673 RTKLKLTATLPP 676

[Close]

BLAST of Cmc02g0048631 vs. ExPASy TrEMBL
Match: A0A5A7VIT8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00050 PE=4 SV=1)

HSP 1 Score: 1039.6 bits (2687), Expect = 4.6e-300
Identity = 529/601 (88.02%), Postives = 539/601 (89.68%), Query Frame = 0


Query: 1    MFSRLSSFHASFSSPQPFFTDISIDLFPLSESPLGNELAQSAPTSVTSDQSSISDGSPEP 60
            MFSRLSSFHASFSSPQ FFTD SIDLFPLSES  GNELAQSAPTS TSDQSSISDG+P+P
Sbjct: 734  MFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDP 793

Query: 61   TSDTPPRRSTR------------------------------------KAMNDELQALEKT 120
              D PPRRSTR                                    KAMNDELQALEK 
Sbjct: 794  PPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKM 853

Query: 121  HTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAPVAE 180
            HTWDYVDLPPGKRPI CKWIYKIKTHSDGTIE YKARLVAKGY QEYGIDYEETFAPVA 
Sbjct: 854  HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVAR 913

Query: 181  MTYVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPLHKVCLLRRALYD 240
            MT VRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSP HKVCLLRRALY 
Sbjct: 914  MTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYG 973

Query: 241  LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAIS 300
            LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAIS
Sbjct: 974  LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAIS 1033

Query: 301  DLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDEYLLSQAKYASDLLARSGITDSNTTSTPL 360
            DLQHYLGQHFEMKDLGSLNYFLGLEVSR SD YLLSQAKYASDLLARSGITDSNT STPL
Sbjct: 1034 DLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPL 1093

Query: 361  DPNVHLTPYDGVPLEDVSLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL 420
            DPNVHLTPYDGVPLE+VSLY+QLVG LIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL
Sbjct: 1094 DPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL 1153

Query: 421  RILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK 480
            RILRY+KGTLGHGLQFSSQSSLVL GYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK
Sbjct: 1154 RILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK 1213

Query: 481  QSVVSHSSTESEYRTLADTTAELLWLRWLVADMGVPQQSPTLLHCDNRSAIQIAHNDVFH 540
            QSVVS SSTESEYR LAD TAELLWLRWL+ADMGVPQQ PTLLHCDNRSAIQIAHNDVFH
Sbjct: 1214 QSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFH 1273

Query: 541  ERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTELKLTATLP 566
            ERTKHIENDCHFIRHHLLS+TLLLQ +STTEQPADIFTKALPSTRFNQ+RT+LKLTATLP
Sbjct: 1274 ERTKHIENDCHFIRHHLLSHTLLLQSISTTEQPADIFTKALPSTRFNQIRTKLKLTATLP 1333

[Close]

BLAST of Cmc02g0048631 vs. ExPASy TrEMBL
Match: A0A5A7T8F2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00410 PE=4 SV=1)

HSP 1 Score: 1039.6 bits (2687), Expect = 4.6e-300
Identity = 529/601 (88.02%), Postives = 539/601 (89.68%), Query Frame = 0


Query: 1    MFSRLSSFHASFSSPQPFFTDISIDLFPLSESPLGNELAQSAPTSVTSDQSSISDGSPEP 60
            MFSRLSSFHASFSSPQ FFTD SIDLFPLSES  GNELAQSAPTS TSDQSSISDG+P+P
Sbjct: 734  MFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDP 793

Query: 61   TSDTPPRRSTR------------------------------------KAMNDELQALEKT 120
              D PPRRSTR                                    KAMNDELQALEK 
Sbjct: 794  PPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKM 853

Query: 121  HTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAPVAE 180
            HTWDYVDLPPGKRPI CKWIYKIKTHSDGTIE YKARLVAKGY QEYGIDYEETFAPVA 
Sbjct: 854  HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVAR 913

Query: 181  MTYVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPLHKVCLLRRALYD 240
            MT VRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSP HKVCLLRRALY 
Sbjct: 914  MTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYG 973

Query: 241  LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAIS 300
            LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAIS
Sbjct: 974  LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAIS 1033

Query: 301  DLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDEYLLSQAKYASDLLARSGITDSNTTSTPL 360
            DLQHYLGQHFEMKDLGSLNYFLGLEVSR SD YLLSQAKYASDLLARSGITDSNT STPL
Sbjct: 1034 DLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPL 1093

Query: 361  DPNVHLTPYDGVPLEDVSLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL 420
            DPNVHLTPYDGVPLE+VSLY+QLVG LIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL
Sbjct: 1094 DPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL 1153

Query: 421  RILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK 480
            RILRY+KGTLGHGLQFSSQSSLVL GYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK
Sbjct: 1154 RILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK 1213

Query: 481  QSVVSHSSTESEYRTLADTTAELLWLRWLVADMGVPQQSPTLLHCDNRSAIQIAHNDVFH 540
            QSVVS SSTESEYR LAD TAELLWLRWL+ADMGVPQQ PTLLHCDNRSAIQIAHNDVFH
Sbjct: 1214 QSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFH 1273

Query: 541  ERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTELKLTATLP 566
            ERTKHIENDCHFIRHHLLS+TLLLQ +STTEQPADIFTKALPSTRFNQ+RT+LKLTATLP
Sbjct: 1274 ERTKHIENDCHFIRHHLLSHTLLLQSISTTEQPADIFTKALPSTRFNQIRTKLKLTATLP 1333

[Close]

BLAST of Cmc02g0048631 vs. ExPASy TrEMBL
Match: A0A5D3C0D7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00020 PE=4 SV=1)

HSP 1 Score: 1038.1 bits (2683), Expect = 1.3e-299
Identity = 528/601 (87.85%), Postives = 539/601 (89.68%), Query Frame = 0


Query: 1    MFSRLSSFHASFSSPQPFFTDISIDLFPLSESPLGNELAQSAPTSVTSDQSSISDGSPEP 60
            MFSRLSSFHASFSSPQ FFTD SIDLFPLSES  GNELAQSAPTS TSDQSSISDG+P+P
Sbjct: 734  MFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDP 793

Query: 61   TSDTPPRRSTR------------------------------------KAMNDELQALEKT 120
              D PPRRSTR                                    KAMNDELQALEK 
Sbjct: 794  PPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKM 853

Query: 121  HTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAPVAE 180
            HTWDYVDLPPGKRPI CKWIYKIKTHSDGTIE YKARLVAKGY QEYGIDYEETFAPVA 
Sbjct: 854  HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVAR 913

Query: 181  MTYVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPLHKVCLLRRALYD 240
            MT VRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSP HKVCLLRRALY 
Sbjct: 914  MTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYG 973

Query: 241  LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAIS 300
            LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAIS
Sbjct: 974  LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAIS 1033

Query: 301  DLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDEYLLSQAKYASDLLARSGITDSNTTSTPL 360
            DLQHYLGQHFEMKDLGSLNYFLGLEVSR SD YLLSQAKYASDLLARSGITDSNT STPL
Sbjct: 1034 DLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPL 1093

Query: 361  DPNVHLTPYDGVPLEDVSLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL 420
            DPNVHLTPYDGVPLE+VSLY+QLVG LIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL
Sbjct: 1094 DPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL 1153

Query: 421  RILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK 480
            RILRY+KGTLGHGLQFSSQSSLVL GYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK
Sbjct: 1154 RILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK 1213

Query: 481  QSVVSHSSTESEYRTLADTTAELLWLRWLVADMGVPQQSPTLLHCDNRSAIQIAHNDVFH 540
            QSVVS SSTESEYR LAD TAELLWLRWL+ADMGVPQQ PTLLHCDNRSAIQIAHNDVFH
Sbjct: 1214 QSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFH 1273

Query: 541  ERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTELKLTATLP 566
            ERTKHIENDCHFIRHHLLS+TLLLQ +STTEQPADIFTKALPSTRFNQ+RT+LKLTA+LP
Sbjct: 1274 ERTKHIENDCHFIRHHLLSHTLLLQSISTTEQPADIFTKALPSTRFNQIRTKLKLTASLP 1333

[Close]

BLAST of Cmc02g0048631 vs. ExPASy TrEMBL
Match: A0A5A7VBA1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002020 PE=4 SV=1)

HSP 1 Score: 1035.8 bits (2677), Expect = 6.7e-299
Identity = 530/601 (88.19%), Postives = 537/601 (89.35%), Query Frame = 0


Query: 1   MFSRLSSFHASFSSPQPFFTDISIDLFPLSESPLGNELAQSAPTSVTSDQSSISDGSPEP 60
           MFSRLSSFH SFSSPQPFFTD SIDLFP SESP+GNELAQSAPTS TS+QSSIS GSPEP
Sbjct: 175 MFSRLSSFHTSFSSPQPFFTDTSIDLFPPSESPIGNELAQSAPTSATSNQSSISGGSPEP 234

Query: 61  TSDTPPRRSTR------------------------------------KAMNDELQALEKT 120
           T DTPPRRSTR                                    KAMNDELQALEKT
Sbjct: 235 TPDTPPRRSTRVREPPIHLQDYHCFSTIISLVEPTSYQEASINPVWQKAMNDELQALEKT 294

Query: 121 HTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYGIDYEETFAPVAE 180
           HTWDYVDLPPGKRPI CKWIYKIKTHSDGTIE YKARLVAKGY QEYGIDYEETFAPVA 
Sbjct: 295 HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVAR 354

Query: 181 MTYVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPLHKVCLLRRALYD 240
           MT VRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPP GTSSP HKVCLLRRALY 
Sbjct: 355 MTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPSGTSSPPHKVCLLRRALYG 414

Query: 241 LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAIS 300
           LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDP AIS
Sbjct: 415 LKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAIS 474

Query: 301 DLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDEYLLSQAKYASDLLARSGITDSNTTSTPL 360
           DLQHYLGQHFEMKDLGSLNYFLGLEVSR SD YLLSQ KYASDLLARSGITDSNT STPL
Sbjct: 475 DLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQTKYASDLLARSGITDSNTASTPL 534

Query: 361 DPNVHLTPYDGVPLEDVSLYQQLVGRLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL 420
           D NVHLTPYDGVPL++VSLY+QLVG LIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL
Sbjct: 535 DLNVHLTPYDGVPLDEVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVL 594

Query: 421 RILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK 480
           RILRYIKGTLGHGLQFSSQSSLVL GYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK
Sbjct: 595 RILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKK 654

Query: 481 QSVVSHSSTESEYRTLADTTAELLWLRWLVADMGVPQQSPTLLHCDNRSAIQIAHNDVFH 540
           QSVVS SSTESEYR LADTTAELLWLRWL+ADMG PQQ PTLLHCDNRSAIQIAHNDVFH
Sbjct: 655 QSVVSRSSTESEYRALADTTAELLWLRWLLADMGAPQQGPTLLHCDNRSAIQIAHNDVFH 714

Query: 541 ERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTELKLTATLP 566
           ERTKHIENDCHFIR HLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRT+LKLTATL 
Sbjct: 715 ERTKHIENDCHFIRRHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLL 774

[Close]

BLAST of Cmc02g0048631 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 458.0 bits (1177), Expect = 1.1e-128
Identity = 229/452 (50.66%), Postives = 307/452 (67.92%), Query Frame = 0


Query: 73  AMNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEYG 132
           AM+DE+ A+E THTW+   LPP K+PI CKW+YKIK +SDGTIE YKARLVAKGY Q+ G
Sbjct: 101 AMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEG 160

Query: 133 IDYEETFAPVAEMTYVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPP------ 192
           ID+ ETF+PV ++T V+ +LA++A   + L Q+D+ NAFLNG L EE+YMK PP      
Sbjct: 161 IDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQ 220

Query: 193 GTSSPLHKVCLLRRALYDLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLL 252
           G S P + VC L++++Y LKQA R WF  FS T+   GF  S  D   F + T    + +
Sbjct: 221 GDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCV 280

Query: 253 LLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDEYLLSQAKYAS 312
           L+YVDD+II  N+  A+ +L+  L   F+++DLG L YFLGLE++R +    + Q KYA 
Sbjct: 281 LVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYAL 340

Query: 313 DLLARSGITDSNTTSTPLDPNVHLTPYDGVPLEDVSLYQQLVGRLIYLTVTRPDIAYAVH 372
           DLL  +G+     +S P+DP+V  + + G    D   Y++L+GRL+YL +TR DI++AV+
Sbjct: 341 DLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVN 400

Query: 373 IVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRST 432
            +SQF  APR  H  AV++IL YIKGT+G GL +SSQ+ + L  +SDA +      RRST
Sbjct: 401 KLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRST 460

Query: 433 TGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLWLRWLVADMGVPQQSPTL 492
            GYC +LG SLISW+SKKQ VVS SS E+EYR L+  T E++WL     ++ +P   PTL
Sbjct: 461 NGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTL 520

Query: 493 LHCDNRSAIQIAHNDVFHERTKHIENDCHFIR 519
           L CDN +AI IA N VFHERTKHIE+DCH +R
Sbjct: 521 LFCDNTAAIHIATNAVFHERTKHIESDCHSVR 552

[Close]

BLAST of Cmc02g0048631 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 193.4 bits (490), Expect = 5.1e-49
Identity = 103/224 (45.98%), Postives = 141/224 (62.95%), Query Frame = 0


Query: 246 LLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRCSDEYLLSQAKYA 305
           LLLYVDD+++TG+    ++ L   L   F MKDLG ++YFLG+++        LSQ KYA
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 306 SDLLARSGITDSNTTSTPLDPNVHLTPYDGVPLEDVSLYQQLVGRLIYLTVTRPDIAYAV 365
             +L  +G+ D    STPL   ++ +        D S ++ +VG L YLT+TRPDI+YAV
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 366 HIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGYSDADWAGDPTDRRS 425
           +IV Q M  P    F  + R+LRY+KGT+ HGL     S L +  + D+DWAG  + RRS
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 426 TTGYCFYLGDSLISWRSKKQSVVSHSSTESEYRTLADTTAELLW 470
           TTG+C +LG ++ISW +K+Q  VS SSTE+EYR LA T AEL W
Sbjct: 183 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc02g0048631 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 89.0 bits (219), Expect = 1.4e-17
Identity = 40/79 (50.63%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 352 IYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLFGY 411
           +YLT+TRPD+ +AV+ +SQF +A RT    AV ++L Y+KGT+G GL +S+ S L L  +
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 412 SDADWAGDPTDRRSTTGYC 431
           +D+DWA  P  RRS TG+C
Sbjct: 61  ADSDWASCPDTRRSVTGFC 79

[Close]

BLAST of Cmc02g0048631 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 89.0 bits (219), Expect = 1.4e-17
Identity = 40/84 (47.62%), Postives = 56/84 (66.67%), Query Frame = 0


Query: 72  KAMNDELQALEKTHTWDYVDLPPGKRPISCKWIYKIKTHSDGTIEHYKARLVAKGYFQEY 131
           +AM +EL AL +  TW  V  P  +  + CKW++K K HSDGT++  KARLVAKG+ QE 
Sbjct: 42  QAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEE 101

Query: 132 GIDYEETFAPVAEMTYVRSLLAVA 156
           GI + ET++PV     +R++L VA
Sbjct: 102 GIYFVETYSPVVRTATIRTILNVA 125

The following BLAST results are available for this feature:

BLAST of Cmc02g0048631 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050089.1	0.0e+00	98.37	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0037745.1	9.6e-300	88.02	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0041601.1	9.6e-300	88.02	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK04714.1	2.8e-299	87.85	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0064888.1	1.4e-298	88.19	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Cmc02g0048631 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	1.4e-120	46.08	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	4.7e-116	44.47	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	1.1e-99	40.43	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.9e-93	37.60	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92519	7.2e-48	45.98	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc02g0048631 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U9B9	0.0e+00	98.37	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5A7VIT8	4.6e-300	88.02	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7T8F2	4.6e-300	88.02	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3C0D7	1.3e-299	87.85	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7VBA1	6.7e-299	88.19	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Cmc02g0048631 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.1e-128	50.66	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	5.1e-49	45.98	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	1.4e-17	50.63	Gag-Pol-related retrotransposon family protein	[more]
ATMG00820.1	1.4e-17	47.62	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 85..324 e-value: 1.8E-71 score: 240.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..72
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 63..443
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 410..547 e-value: 3.31528E-80 score: 246.226
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 84..515

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0048631.1	Cmc02g0048631.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0016020	membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding