Cmc02g0047441 (gene) Melon (Charmono) v1.1

Overview
NameCmc02g0047441
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr02: 13021350 .. 13022914 (-)
RNA-Seq ExpressionCmc02g0047441
SyntenyCmc02g0047441
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAAGCAAAAGAGTTTGTTAAGAGGGAAAAATTCTAAAATGACGGGAGGGGTCGAAGAAGTTTTTTTTAAGGAAAGATGAAGAAAAGAAACTTTTCATGTAATATCATTTTGTAAATAGTTTTTTTTTTCCCAGTTTATCACTATTCTTCTTTTATGTAATTCTCTTAAGAAATTTAATGCAAGAATTCGTACTCCCCACTTGTTCTCTGTTTTTAATGGAAAAAAGATGAGGCCGTAATTCATTTCCACCGCCATTCACTTCAGATTTTCCATAACTGTCAATTGGCTATGGCGATGGTAGATTCAAGTTTTATCTTCATCGGTATCTCCGCCGTACCTCATCCCCTTTTGAACAACAACAAAAACAATAATGGCAGAAAATTCGGAATCACTTCGGCAAAACGTACACAAGATTCCGATTCCACTTCATCAACCCAACCAAATCAATTCAAATTTCCATCGCTGAGAGTATCAAATCCACTTCTCGCCCGATCTGTCGTTTCGGTTCTCGGATTAGGGTTCGTCGATGCAGGGTATGCAAAATTTTACCTCTAATTAATTTCGATTTGAGAATTGCTCTGTTTTATTTTTTTTGTTTTAACTCAAATTGAAGTCGAATTAGGGTTTGGAATGATTAGGTATAGCGGAGATTGGTCTAGAATTGGAGCGATTACGAAGGAAACAGAAGAATTGCTTAAGATTGGAGCTTTCTTGGTGGTTCCGTTTTGTGTATTTCTCGTTTTTTCTTTCTCAAAATTTGATTCGGATTCTTCGTAAGTGTTTGGATGATGGATTCCCCAAAACGGTTAGAAATAATTTCAATTTAAAAATGGTAGGTGAGCTAAAGTTGTTCTTTTTGCTTAAAAGGGAGATCTTTGAAGAACATGTACAAAGTTCATTTACTGATATGCACATGTTTGATGTTGGTTTCCACTCTCATGCTTTAGAATTTTGTAGTTGTACCAAAGTTTGGAAATGGTACATAAATGAGACGAAATCACATTTTGAACGAGATAAACTTTATGGATATAAACGTGTAGTTTAGATAGATTAAAGGTGCACGCATTCACTTTAGTACCTAGTTTTTTGTTTCTTGAAGTTGTATGAGACTACATTTGTTGTTGCTGCTGCACTTCGGTATCGACCCTCAGAATAAAACAACTCTCGTTTTCAATTGATTTTGTACGAAGATCAACCGAAATCAAAATCTCTCAAAATGATTTCCTCTCTCCTTCTAAAACTTGGGTGTCTAAGGACCTAAACTCATTGGCCAACCAATAGGTATATTAAAGAGCCTCCACATTCTAAATTTAGGGAATGCTTTAGAGAATCCCCCACTTGAAAAATGTTTACTATCAATCGTACACTCGGAGGATTTTTCTTTTTTCTTTTTAGATCAACTCAACTATCAATGTGCTTAACTCACTTTGGTGAGGTTTGGAGTTCATAGCATCCATCTTTTCATTGTATCTTCATCTATTAATTAATAGTCTTATAATAATACTATATGCATTATTGTAAATAGTCATTCCGCATAGCAATTATTAATCACATTAAATAATCT

mRNA sequence

TCAAGCAAAAGAGTTTGTTAAGAGGGAAAAATTCTAAAATGACGGGAGGGGTCGAAGAAGTTTTTTTTAAGGAAAGATGAAGAAAAGAAACTTTTCATGTAATATCATTTTGTAAATAGTTTTTTTTTTCCCAGTTTATCACTATTCTTCTTTTATGTAATTCTCTTAAGAAATTTAATGCAAGAATTCGTACTCCCCACTTGTTCTCTGTTTTTAATGGAAAAAAGATGAGGCCGTAATTCATTTCCACCGCCATTCACTTCAGATTTTCCATAACTGTCAATTGGCTATGGCGATGGTAGATTCAAGTTTTATCTTCATCGGTATCTCCGCCGTACCTCATCCCCTTTTGAACAACAACAAAAACAATAATGGCAGAAAATTCGGAATCACTTCGGCAAAACGTACACAAGATTCCGATTCCACTTCATCAACCCAACCAAATCAATTCAAATTTCCATCGCTGAGAGTATCAAATCCACTTCTCGCCCGATCTGTCGTTTCGGTTCTCGGATTAGGGTTCGTCGATGCAGGGGTTTGGAATGATTAGGTATAGCGGAGATTGGTCTAGAATTGGAGCGATTACGAAGGAAACAGAAGAATTGCTTAAGATTGGAGCTTTCTTGGTGGTTCCGTTTTGTGTATTTCTCGTTTTTTCTTTCTCAAAATTTGATTCGGATTCTTCGTAAGTGTTTGGATGATGGATTCCCCAAAACGGTTAGAAATAATTTCAATTTAAAAATGGTAGGTGAGCTAAAGTTGTTCTTTTTGCTTAAAAGGGAGATCTTTGAAGAACATGTACAAAGTTCATTTACTGATATGCACATGTTTGATGTTGGTTTCCACTCTCATGCTTTAGAATTTTGTAGTTGTACCAAAGTTTGGAAATGGTACATAAATGAGACGAAATCACATTTTGAACGAGATAAACTTTATGGATATAAACGTGTAGTTTAGATAGATTAAAGGTGCACGCATTCACTTTAGTACCTAGTTTTTTGTTTCTTGAAGTTGTATGAGACTACATTTGTTGTTGCTGCTGCACTTCGGTATCGACCCTCAGAATAAAACAACTCTCGTTTTCAATTGATTTTGTACGAAGATCAACCGAAATCAAAATCTCTCAAAATGATTTCCTCTCTCCTTCTAAAACTTGGGTGTCTAAGGACCTAAACTCATTGGCCAACCAATAGGTATATTAAAGAGCCTCCACATTCTAAATTTAGGGAATGCTTTAGAGAATCCCCCACTTGAAAAATGTTTACTATCAATCGTACACTCGGAGGATTTTTCTTTTTTCTTTTTAGATCAACTCAACTATCAATGTGCTTAACTCACTTTGGTGAGGTTTGGAGTTCATAGCATCCATCTTTTCATTGTATCTTCATCTATTAATTAATAGTCTTATAATAATACTATATGCATTATTGTAAATAGTCATTCCGCATAGCAATTATTAATCACATTAAATAATCT

Coding sequence (CDS)

ATGGCGATGGTAGATTCAAGTTTTATCTTCATCGGTATCTCCGCCGTACCTCATCCCCTTTTGAACAACAACAAAAACAATAATGGCAGAAAATTCGGAATCACTTCGGCAAAACGTACACAAGATTCCGATTCCACTTCATCAACCCAACCAAATCAATTCAAATTTCCATCGCTGAGAGTATCAAATCCACTTCTCGCCCGATCTGTCGTTTCGGTTCTCGGATTAGGGTTCGTCGATGCAGGGGTTTGGAATGATTAG

Protein sequence

MAMVDSSFIFIGISAVPHPLLNNNKNNNGRKFGITSAKRTQDSDSTSSTQPNQFKFPSLRVSNPLLARSVVSVLGLGFVDAGVWND
Homology
[Close]
BLAST of Cmc02g0047441 vs. NCBI nr
Match: XP_008443827.1 (PREDICTED: uncharacterized protein LOC103487329 [Cucumis melo])

HSP 1 Score: 161.8 bits (408), Expect = 2.7e-36
Identity = 83/86 (96.51%), Postives = 83/86 (96.51%), Query Frame = 0 

Query: 1  MAMVDSSFIFIGISAVPHPLLNNNKNNNGRKFGITSAKRTQDSDSTSSTQPNQFKFPSLR 60
          MAMVDSSFIFIGISAVPHPLLNNNKNNNGRKFGITSAKRTQDSDSTSSTQPNQFKFPSLR
Sbjct: 1  MAMVDSSFIFIGISAVPHPLLNNNKNNNGRKFGITSAKRTQDSDSTSSTQPNQFKFPSLR 60

Query: 61 VSNPLLARSVVSVLGLGFVDAGVWND 87
          VSNPLLARSVVSVLGLGFVDAG   D
Sbjct: 61 VSNPLLARSVVSVLGLGFVDAGYSGD 86

[Close]
BLAST of Cmc02g0047441 vs. NCBI nr
Match: XP_004146667.1 (uncharacterized protein LOC101206545 [Cucumis sativus] >KGN65187.1 hypothetical protein Csa_020133 [Cucumis sativus])

HSP 1 Score: 140.2 bits (352), Expect = 8.4e-30
Identity = 77/88 (87.50%), Postives = 77/88 (87.50%), Query Frame = 0 

Query: 1  MAMVDSSFIFIGISAVPHPLLNNNKNNNGRKFGITSAKRTQ--DSDSTSSTQPNQFKFPS 60
          MAMVDSSFIFIG S VPHPLLN   NNNGRKFGITSAKRTQ  DSDS SSTQPNQFKFPS
Sbjct: 1  MAMVDSSFIFIGFSPVPHPLLN---NNNGRKFGITSAKRTQDSDSDSASSTQPNQFKFPS 60

Query: 61 LRVSNPLLARSVVSVLGLGFVDAGVWND 87
          LRVSNPLLARSVVSVLGLGFVDAG   D
Sbjct: 61 LRVSNPLLARSVVSVLGLGFVDAGYSGD 85

[Close]
BLAST of Cmc02g0047441 vs. NCBI nr
Match: XP_023004836.1 (uncharacterized protein LOC111498016 [Cucurbita maxima])

HSP 1 Score: 113.2 bits (282), Expect = 1.1e-21
Identity = 63/86 (73.26%), Postives = 69/86 (80.23%), Query Frame = 0 

Query: 1  MAMVDSSFIFIGISAVPHPLLNNNKNNNGRKFGITSAKRTQDSDSTSSTQPNQFKFPSLR 60
          M + DSSFIF G+SA+PHPL+ +  NNN RKFG TSAKRT DSDS SST   Q KFPSLR
Sbjct: 1  MPIADSSFIFTGLSALPHPLILS--NNNARKFGTTSAKRTGDSDSISST---QLKFPSLR 60

Query: 61 VSNPLLARSVVSVLGLGFVDAGVWND 87
          VSNPLLARSVV+VLGLGFVDAG   D
Sbjct: 61 VSNPLLARSVVAVLGLGFVDAGYSGD 81

[Close]
BLAST of Cmc02g0047441 vs. NCBI nr
Match: XP_022933449.1 (uncharacterized protein LOC111440861 [Cucurbita moschata] >KAG6587801.1 hypothetical protein SDJN03_16366, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035696.1 hypothetical protein SDJN02_02494, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 112.8 bits (281), Expect = 1.4e-21
Identity = 63/86 (73.26%), Postives = 69/86 (80.23%), Query Frame = 0 

Query: 1  MAMVDSSFIFIGISAVPHPLLNNNKNNNGRKFGITSAKRTQDSDSTSSTQPNQFKFPSLR 60
          M + DSSFIF G+SA+PHPLL +  NNN RKFG TSAKRT DSDS SST   Q KFPSLR
Sbjct: 1  MPIADSSFIFTGLSALPHPLLLS--NNNARKFGTTSAKRTGDSDSISST---QLKFPSLR 60

Query: 61 VSNPLLARSVVSVLGLGFVDAGVWND 87
          V+NPLLARSVV+VLGLGFVDAG   D
Sbjct: 61 VANPLLARSVVAVLGLGFVDAGYSGD 81

[Close]
BLAST of Cmc02g0047441 vs. NCBI nr
Match: XP_038879768.1 (uncharacterized protein LOC120071517 [Benincasa hispida])

HSP 1 Score: 111.7 bits (278), Expect = 3.2e-21
Identity = 63/86 (73.26%), Postives = 70/86 (81.40%), Query Frame = 0 

Query: 1   MAMVDSSFIFIGISAVPHPLLNNNKNNNGRKFGITSAKRTQDSDSTSSTQPNQFKFPSLR 60
           MAMV+SSFIFIG+S VP+PL N   NN+ RKF ITSAK T+DSDS S +  +Q KFPSLR
Sbjct: 27  MAMVNSSFIFIGVSTVPYPLSN---NNHSRKFRITSAKLTEDSDSDSKS--SQLKFPSLR 86

Query: 61  VSNPLLARSVVSVLGLGFVDAGVWND 87
           VSNPLLARSVVSVLGLGFVDAG   D
Sbjct: 87  VSNPLLARSVVSVLGLGFVDAGYSGD 107

[Close]
BLAST of Cmc02g0047441 vs. ExPASy TrEMBL
Match: A0A1S3B903 (uncharacterized protein LOC103487329 OS=Cucumis melo OX=3656 GN=LOC103487329 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.3e-36
Identity = 83/86 (96.51%), Postives = 83/86 (96.51%), Query Frame = 0 

Query: 1  MAMVDSSFIFIGISAVPHPLLNNNKNNNGRKFGITSAKRTQDSDSTSSTQPNQFKFPSLR 60
          MAMVDSSFIFIGISAVPHPLLNNNKNNNGRKFGITSAKRTQDSDSTSSTQPNQFKFPSLR
Sbjct: 1  MAMVDSSFIFIGISAVPHPLLNNNKNNNGRKFGITSAKRTQDSDSTSSTQPNQFKFPSLR 60

Query: 61 VSNPLLARSVVSVLGLGFVDAGVWND 87
          VSNPLLARSVVSVLGLGFVDAG   D
Sbjct: 61 VSNPLLARSVVSVLGLGFVDAGYSGD 86

[Close]
BLAST of Cmc02g0047441 vs. ExPASy TrEMBL
Match: A0A0A0LWH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257930 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.0e-30
Identity = 77/88 (87.50%), Postives = 77/88 (87.50%), Query Frame = 0 

Query: 1  MAMVDSSFIFIGISAVPHPLLNNNKNNNGRKFGITSAKRTQ--DSDSTSSTQPNQFKFPS 60
          MAMVDSSFIFIG S VPHPLLN   NNNGRKFGITSAKRTQ  DSDS SSTQPNQFKFPS
Sbjct: 1  MAMVDSSFIFIGFSPVPHPLLN---NNNGRKFGITSAKRTQDSDSDSASSTQPNQFKFPS 60

Query: 61 LRVSNPLLARSVVSVLGLGFVDAGVWND 87
          LRVSNPLLARSVVSVLGLGFVDAG   D
Sbjct: 61 LRVSNPLLARSVVSVLGLGFVDAGYSGD 85

[Close]
BLAST of Cmc02g0047441 vs. ExPASy TrEMBL
Match: A0A6J1KT82 (uncharacterized protein LOC111498016 OS=Cucurbita maxima OX=3661 GN=LOC111498016 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.3e-22
Identity = 63/86 (73.26%), Postives = 69/86 (80.23%), Query Frame = 0 

Query: 1  MAMVDSSFIFIGISAVPHPLLNNNKNNNGRKFGITSAKRTQDSDSTSSTQPNQFKFPSLR 60
          M + DSSFIF G+SA+PHPL+ +  NNN RKFG TSAKRT DSDS SST   Q KFPSLR
Sbjct: 1  MPIADSSFIFTGLSALPHPLILS--NNNARKFGTTSAKRTGDSDSISST---QLKFPSLR 60

Query: 61 VSNPLLARSVVSVLGLGFVDAGVWND 87
          VSNPLLARSVV+VLGLGFVDAG   D
Sbjct: 61 VSNPLLARSVVAVLGLGFVDAGYSGD 81

[Close]
BLAST of Cmc02g0047441 vs. ExPASy TrEMBL
Match: A0A6J1EZT4 (uncharacterized protein LOC111440861 OS=Cucurbita moschata OX=3662 GN=LOC111440861 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.9e-22
Identity = 63/86 (73.26%), Postives = 69/86 (80.23%), Query Frame = 0 

Query: 1  MAMVDSSFIFIGISAVPHPLLNNNKNNNGRKFGITSAKRTQDSDSTSSTQPNQFKFPSLR 60
          M + DSSFIF G+SA+PHPLL +  NNN RKFG TSAKRT DSDS SST   Q KFPSLR
Sbjct: 1  MPIADSSFIFTGLSALPHPLLLS--NNNARKFGTTSAKRTGDSDSISST---QLKFPSLR 60

Query: 61 VSNPLLARSVVSVLGLGFVDAGVWND 87
          V+NPLLARSVV+VLGLGFVDAG   D
Sbjct: 61 VANPLLARSVVAVLGLGFVDAGYSGD 81

[Close]
BLAST of Cmc02g0047441 vs. ExPASy TrEMBL
Match: A0A6J1C0R6 (uncharacterized protein LOC111007301 OS=Momordica charantia OX=3673 GN=LOC111007301 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.7e-15
Identity = 53/84 (63.10%), Postives = 57/84 (67.86%), Query Frame = 0 

Query: 3  MVDSSFIFIGISAVPHPLLNNNKNNNGRKFGITSAKRTQDSDSTSSTQPNQFKFPSLRVS 62
          M DS+FIF G SAV   L N    NN R F    AKRT DS +T S Q NQF+FPSLRV 
Sbjct: 1  MADSTFIFSGPSAVSRSLFN---VNNRRNFRTALAKRTDDSTATKSNQENQFEFPSLRVP 60

Query: 63 NPLLARSVVSVLGLGFVDAGVWND 87
          NPL+AR VVSVLGLGFVDAG   D
Sbjct: 61 NPLVARFVVSVLGLGFVDAGYSGD 81

The following BLAST results are available for this feature:
BLAST of Cmc02g0047441 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008443827.12.7e-3696.51PREDICTED: uncharacterized protein LOC103487329 [Cucumis melo][more]
XP_004146667.18.4e-3087.50uncharacterized protein LOC101206545 [Cucumis sativus] >KGN65187.1 hypothetical ... [more]
XP_023004836.11.1e-2173.26uncharacterized protein LOC111498016 [Cucurbita maxima][more]
XP_022933449.11.4e-2173.26uncharacterized protein LOC111440861 [Cucurbita moschata] >KAG6587801.1 hypothet... [more]
XP_038879768.13.2e-2173.26uncharacterized protein LOC120071517 [Benincasa hispida][more]
BLAST of Cmc02g0047441 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc02g0047441 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3B9031.3e-3696.51uncharacterized protein LOC103487329 OS=Cucumis melo OX=3656 GN=LOC103487329 PE=... [more]
A0A0A0LWH44.0e-3087.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257930 PE=4 SV=1[more]
A0A6J1KT825.3e-2273.26uncharacterized protein LOC111498016 OS=Cucurbita maxima OX=3661 GN=LOC111498016... [more]
A0A6J1EZT46.9e-2273.26uncharacterized protein LOC111440861 OS=Cucurbita moschata OX=3662 GN=LOC1114408... [more]
A0A6J1C0R61.7e-1563.10uncharacterized protein LOC111007301 OS=Momordica charantia OX=3673 GN=LOC111007... [more]
BLAST of Cmc02g0047441 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..55

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc02g0047441.1Cmc02g0047441.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane