Cmc02g0043221 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0043221
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Pentatricopeptide repeat-containing protein
Location	CMiso1.1chr02: 5380829 .. 5386710 (-)
RNA-Seq Expression	Cmc02g0043221
Synteny	Cmc02g0043221

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGATTTATTCAAGAAGTTTTGACACTCACTCACATTTTGATTTTTCTCAAATTAGTTTACTTATAACATTTAAGGTTGATATGATATTGTTCACGTTAGGCATAAACCCTCGTAACTTTACTTCTTTATTATCCAAAGAACCAAAGGTCATCTTCATATTTAATCTATGTGGAACTTTGATCGCATTTCCAACACTACCTTGATCCATTATCTTTATAGTAAGATCTAACCAGGATTGTTGCTCTTAACTCTTATTTTGAATTGAGTTGAATTGGAGTGTTCAAATGTTTTATTTTGAAGTCTTGGAACTCATTTATTTTTAGTTTTCTTTTGTTTTTTTGTTATAATAGTGTGCATTGGAGAATCCAAGATTCAATTTTGAACGTGTAGGAACTCTCATCTTCGATCAATCGTTTGCCACCATATTTACATCCTTCGTATCGTTCTCACTTCAACTTGGGCTTCATGATCAATCTTAATGTCAGCAATCTCATCTTTAGATATCTGCATTTCGTCCCAAGATCAACATTTCAAATCCCCTTCATTTTCCTACTCCACACTCACTCTCTTCCACATCACAAAGATAAACCCACCAATTGGAACGCATCTCACGTTCTGATTCAATCCAACCCACTTCTCTCCCTCTTAGAAGCATGCTCTTCTATGGCGCAAATGAAGCAAATTCACGCCCAAATGATTTCAACTGGCTTGATCTCAGATGGGTTTGCTCTGAGTCGCCTCGTTGCTTTCTGTGCGATTTCAGAATGGCGAAATTTGGACTATTGTGACAAAATTCTTAACAATGCTGCAAACCCAAATGTTTTTTCTTGGAATATGGCGATTAGGGGCTATATAGAGAGTGAAAATCCCAGATATGCCGTTCTTTTGTACAGGAATATGCTTAGAAAAGGTAGTGCGACTCCTGATAATTATACGTATCCTCTGTTGTTCAAAGTTTGTGCCGGTTTTTCGTTGAGTTGCACTGCTAATGAGATTCTTGGGCATGTAATACAGTTGGGTTTTGATTCGGATTTGTTTGTGCACAATGCAATCATTCATGTGTTGGTTTCATGTGGAGAATTGTTAGCTGCACGTAAGGTATTCGATGAAAGTTGTGTGAGAGATTTGGTTTCTTGGAACTCCATTATCAATGGATACGTTCGGTGTGGTCTGGCAGACGAGGCGTTGGATCTTTATTACAAGATGGGGGAACTGAATGTGATGCCAGATGAGGTCACAATGATTGGAGTCGTTTCAGCTTCTGCTCAGCTTGAAAATTTAGCTCTTGGAAGAAAGCTTCATCAATTCATTGAAGAAATGGGTTTGAATTTGACCGTTCCACTTGCCAATGCGTTGATGGATATGTATATTAAGTGTAAGAATATTGAGGCTGCGAAAATACTATTTGAGAACATGCCAAAGAAAACTGTTGTTTCATGGACTATAATGGTTGTTGGATATGCCAAATTTGGGTTGTTGGAAAGTGCTGTGAGGCTGTTCAATGAGATGCCAGAGAAGGATGTTGTGCCATGGAATGCTCTAATTGGTGGCTTTGTTCAAGCCAAGCGTAGTAAGGAGGCTTTGGCTTTGTTTCATGAAATGCAGGCCAGCAACGTTGCCCCGGATGGGGTTACTGTCGTTAACTGTTTATCTGCGTGCTCTCAACTTGGAGCACTTGATGTTGGAATTTGGATGCACCATTATGTCGATAAACACGATCTTACTATGAATGTTGCCTTAGGAACTGCTTTAGTTGACATGTATGCTAAGTGTGGGAACATTAAAAAGGCTATACAGGTTTTTGAGGAGATGCCAGGAAGAAACTCGTTGACATGGACAGCTATAATTTGTGGTCTAGCACTTCACGGACAAGCACATGCTGCCATATCTTACTTCTCAGAGATGATTAGCATTGGACTAGTGCCTGACGAGATCACCTTCATTGGGGTCCTATCAGCTTGTTGTCACGGTGGCCTGGTTGATCAAGGACGAGACTATTTTTACCAAATGAGCTCTAAATTTGGTATTTCCCCAAAACTTAAGCATTATTCTTGTTTGGTGGACCTTCTAGGTAGGGCTGGCTTCTTGGAAGAAGCAGAAGAGCTTATTAGGAGCATGCCTTTCGAACCTGATGCTGTAGTGTGGGGAGCATTGTTCTTTGGCAGCCGTATTCACGGAAATGTTCATATGGGAGAAAGAGCCGCTTCTAAGCTTCTTGAGTTGGATCCTCATGATAGTGGAATTTATGTTTTGCTTGCTAATATGTATGGTGATGCTAATATGTGGGAGCAGGCAAGGAAGGTAAGAAAGATGATGGAAGAAAGAGGGGTAGAGAAAACACCAGGTTGTAGTTCGATTGAGATGAACGGTTTAGTTTATGAGTTTATAATTCGTGACAAGTCACATCCTCAATCGGAGAAAATTTATGAATGTTTGACATGGTTAACAAGACAGCTTGAAGTTATTGAGGTCGATACTTCTTTATTCAAAGAATTTTCCTCTTGGTGTTAATCTAGGTTGCCAGATTTGAGTTGAGAAACCTACCAAGCTCGCTCTCACATGCTTGTGCTTGAAAGAACAATCATGGATAGCTATCTAGCACCCTGAAGGATTTCCAGGCTACAAGGATTTGAAAATTTGGACATATCCTTTGAAATCTTGGGTTCAAGCCTCTTGAGACTTAAACCATTTCATTATCTCCCACAGATAGGCCTTGAGTGGGTGAAGTCTATCTGAAGATTAATGAGAGATGGGCTATACGTATAATACAAGGAGCCGGGCCCTTCGACACCCAGTTTAAAAAATGTTAGTTAATAAAAGAAAGTTTTCTATTCTAGTTCAAGGATTTTTGGGGCAAGGAGTTGAATAGTGAGTTCCTAGAAATTATAGGGAGTTTTGAACTCTTAGACCCACGATGTAATGAGTTGATAAGATATAAAATTGATGTTTTTTAGTGGGATCCACAAACTCCTTTGACCAAACAAGGAGTGGAGTTCACAACTTCTACTTCGCAACTCCTTGGGCCAAACACACCCAAATTGATATGATTCTCTTTGTTAACGATGATGATGTTCTACCTCTAGTAGTCCAAAAAGTGCTTCTGCAGGAAGATCTTGATTTGAAGAAACTTCTGAATGGTATGAAAATGTTCTTTAATGTACGTAATGAGTTCCTTTCGGACATTTCAGTTTCTTGACTTTTAACTTGCATTCCCTTGCTCAGTTATATTTGAAGCATGGTATCGACTTGGCAAGAACTTCAAACAGTTGAACTGAAATGTTAGCCAGGTTCGGATTCAGCTCATTTCTTGCCTCATCTTTTTTAAAGCAAGTCACCAGCGAGTTTTATTTATATGCTTCCATGTAATGGTAGTTGGTGGGTTATGATGATTAAGGTTTACATGCTCAACATGCTAGTAGCATCTCAATTTTTTAGCCATGTTTTCTTGAATTCCTTTGCATGAAGCAAATTGAGGGGAGATAAAGTGCAAATATACTTTAGTTCTATTTTGTTCTCATGTACATTTGATTTTGGTAAGTTAAACTCCAGAAGATTATATTGAAGTCAAACTTTGCGTGAAAAACCCTTTTAGTCTTTGTTGTCGTTACTTGTTTTTTGGTGTTTTTTTTTAAAAAGGGTTCCTAAGATTCGACTTAGAAGTTGAACTTTGGTAACATTGGGTTCTTGAATTTTCAAACTTGATATTTGTTATCTTTTGGTTATTGTAGCTAATAGATTATGGCTGGATTTTTTAATTTGTTTTTGTTTTCTTAAGCTTACTTGACATTTCTTTATTTAAAATTAATTTTCATTTTTTAAACTAGAATTAAAATAAAAGGAAATTAAGGCTCAAGGATACAAAAACCCTCAACAGAGTAGAGAAACAAAGTAAACTAGAGGAAGATAATAATATCGAGATACAATGAAAAAAGAAGACTCCACAAAACGACGAAAGCAAACCCTTATAGTCCTAACGAACCAACAAACTAAAAGTATCACGTTGTTGTCGATCACAAAAACTTTGAAATTGATACCAACAAAAGAAGAGTAAGCAACTGAGAAAAAGAATCCTTGAATATGTTGAAAAAACCAATAGCCTGCAAACATAGCTAATCCAACCCTAAGGTAGTCATTTCTTTTATGATATAGATGAAGAATCAAAGGTTGGATACAATTTTGGATTTCATATGTAATGGAATGTTGAATTTTTAATGTGTTGAGTAAACTCGTTTATTTTAAAAAATTTGAAAATTCTAGGCCTAAATAAGTAATTTTAAAAGTTTAGAGACTAAAGTTGTATTTTAAAAACTTAGAGATGCAGAGATCAATTTGAGGACTCATTATAGCTATTTTTCTCTCTTTCCAATTTGAGGGCTTTCCTGTAATCACCCCTAGGTGTTGGGCCTTCCCTTATGTCATCAACCAATGAAATGTTTCTGATCCAAAAAAAGAAAAGGAAAGAAAATCCGAACCTTAGAGATCAAAGGGTGAGGGGAGGGTTTGATGTCATGTTGAAAAACACGTTAGACTTCCTCTTAATAGAAATAGTATTAAAAAAAATATAGAACATTAGAAAGTTTTATTAAGAAACTATAAACAAAAAGGTGTTTGTGGTAAGGAGTAAAGAGTTATGAAGTCTAGGGAGTTGTGAATTCTTGAGAGCTACAGTGCAAGGAGTTTACTTTTTAGTATGTTGAGAGGTTCAAATCTCCCATATCTAGAGTGGGAAGTCATGCCAATCAGCACATTTTGGTGGACCCACCAACCCATTGAACCAAAAAAGGAGTGTAGTTCACAACTCTCCACTTTCCTAGTCCTACTTCCAAACTCCATTGGGTCAAACACACCAAGGATTTGTTTACTAAATAAGATTTAAACCACAAATAATAGTCTATATTATTGAATATGATTTGTGAGATTTCTGGTAAAAAACAAAAGAAAATTCATTAAGTGGATTTTGTATGCTACTTCTCACTCTTCTTACTCATTGTGGGCAGGAGAACTCAACTATATATAGATTATTAAGGACTTTTAGTTCGTCTTCTTTGACTTTTGTCTTATGACATCGTCTACTTCACAAGATTATATGCTCTTTCCCCAGATTTTGAAGATGGCCTACTCAATGTTAAAAGTGCTCTTTGGGATGTATGCTCTAAAAAATGATCTTGTGGCAAGGATGGCACTTAGAAAAAAAAATGAATCTTACTGGGTTTAAGGGAGTTTCCAGTAGAGTAGTGAAATGCATAGAGATATGAAAGATTACAACGAACACTTGCACTTTGCTGGCCCGATACAGACACCGAGTGGTAAAAGCTAGGGGAGTGAATGAGATTAGATACCCACAAAGCACTAGCTGTAAGTGATGAATAGTTGGTATGTTGTGCGTGTTGATTTGTTCGGTGCTAGAGCCAACACACTAAATAAACTTAAAAGAAATTGATGGAGTCCACACAAAATCTTTATGGTTTCTCGATGGATATTCCTGAATATCGACATTGGAAAGAAAAAGGCGAGGAGATGATTGGCCTTGGTTTCTCATCTAAGATGTCAGAAGAATGATGGAAAAAGTCGCATCCAATCATCCCATAACTATATATGACATGGGGTAAGTTATTTCTTTCGAATCAAGTGTCATATGCAACTATAGATACCAATGTGTCTACATAAATTTTAGAATATAGTTAAAAGTTCTTTTTCTTGTGACGTAAGTTAAATTATATCGAAATACGAATTTGCTAGTAACTACAAGAATTGTAATTCGAATTCCTCTACCCAATTGTACTAATATATATTTATGTGTATGTTTCAAGTAAAGAAGAATGACCCTACAAAAGTTAAAAAGGTGAAGATCGTATTTGAAATAAGAATGTGGAATATAAT

mRNA sequence

TCTGATTTATTCAAGAAGTTTTGACACTCACTCACATTTTGATTTTTCTCAAATTAGTTTACTTATAACATTTAAGGTTGATATGATATTGTTCACGTTAGGCATAAACCCTCGTAACTTTACTTCTTTATTATCCAAAGAACCAAAGGTCATCTTCATATTTAATCTATGTGGAACTTTGATCGCATTTCCAACACTACCTTGATCCATTATCTTTATAGTAAGATCTAACCAGGATTGTTGCTCTTAACTCTTATTTTGAATTGAGTTGAATTGGAGTGTTCAAATGTTTTATTTTGAAGTCTTGGAACTCATTTATTTTTAGTTTTCTTTTGTTTTTTTGTTATAATAGTGTGCATTGGAGAATCCAAGATTCAATTTTGAACGTGTAGGAACTCTCATCTTCGATCAATCGTTTGCCACCATATTTACATCCTTCGTATCGTTCTCACTTCAACTTGGGCTTCATGATCAATCTTAATGTCAGCAATCTCATCTTTAGATATCTGCATTTCGTCCCAAGATCAACATTTCAAATCCCCTTCATTTTCCTACTCCACACTCACTCTCTTCCACATCACAAAGATAAACCCACCAATTGGAACGCATCTCACGTTCTGATTCAATCCAACCCACTTCTCTCCCTCTTAGAAGCATGCTCTTCTATGGCGCAAATGAAGCAAATTCACGCCCAAATGATTTCAACTGGCTTGATCTCAGATGGGTTTGCTCTGAGTCGCCTCGTTGCTTTCTGTGCGATTTCAGAATGGCGAAATTTGGACTATTGTGACAAAATTCTTAACAATGCTGCAAACCCAAATGTTTTTTCTTGGAATATGGCGATTAGGGGCTATATAGAGAGTGAAAATCCCAGATATGCCGTTCTTTTGTACAGGAATATGCTTAGAAAAGGTAGTGCGACTCCTGATAATTATACGTATCCTCTGTTGTTCAAAGTTTGTGCCGGTTTTTCGTTGAGTTGCACTGCTAATGAGATTCTTGGGCATGTAATACAGTTGGGTTTTGATTCGGATTTGTTTGTGCACAATGCAATCATTCATGTGTTGGTTTCATGTGGAGAATTGTTAGCTGCACGTAAGGTATTCGATGAAAGTTGTGTGAGAGATTTGGTTTCTTGGAACTCCATTATCAATGGATACGTTCGGTGTGGTCTGGCAGACGAGGCGTTGGATCTTTATTACAAGATGGGGGAACTGAATGTGATGCCAGATGAGGTCACAATGATTGGAGTCGTTTCAGCTTCTGCTCAGCTTGAAAATTTAGCTCTTGGAAGAAAGCTTCATCAATTCATTGAAGAAATGGGTTTGAATTTGACCGTTCCACTTGCCAATGCGTTGATGGATATGTATATTAAGTGTAAGAATATTGAGGCTGCGAAAATACTATTTGAGAACATGCCAAAGAAAACTGTTGTTTCATGGACTATAATGGTTGTTGGATATGCCAAATTTGGGTTGTTGGAAAGTGCTGTGAGGCTGTTCAATGAGATGCCAGAGAAGGATGTTGTGCCATGGAATGCTCTAATTGGTGGCTTTGTTCAAGCCAAGCGTAGTAAGGAGGCTTTGGCTTTGTTTCATGAAATGCAGGCCAGCAACGTTGCCCCGGATGGGGTTACTGTCGTTAACTGTTTATCTGCGTGCTCTCAACTTGGAGCACTTGATGTTGGAATTTGGATGCACCATTATGTCGATAAACACGATCTTACTATGAATGTTGCCTTAGGAACTGCTTTAGTTGACATGTATGCTAAGTGTGGGAACATTAAAAAGGCTATACAGGTTTTTGAGGAGATGCCAGGAAGAAACTCGTTGACATGGACAGCTATAATTTGTGGTCTAGCACTTCACGGACAAGCACATGCTGCCATATCTTACTTCTCAGAGATGATTAGCATTGGACTAGTGCCTGACGAGATCACCTTCATTGGGGTCCTATCAGCTTGTTGTCACGGTGGCCTGGTTGATCAAGGACGAGACTATTTTTACCAAATGAGCTCTAAATTTGGTATTTCCCCAAAACTTAAGCATTATTCTTGTTTGGTGGACCTTCTAGGTAGGGCTGGCTTCTTGGAAGAAGCAGAAGAGCTTATTAGGAGCATGCCTTTCGAACCTGATGCTGTAGTGTGGGGAGCATTGTTCTTTGGCAGCCGTATTCACGGAAATGTTCATATGGGAGAAAGAGCCGCTTCTAAGCTTCTTGAGTTGGATCCTCATGATAGTGGAATTTATGTTTTGCTTGCTAATATGTATGGTGATGCTAATATGTGGGAGCAGGCAAGGAAGGTAAGAAAGATGATGGAAGAAAGAGGGGTAGAGAAAACACCAGGTTGTAGTTCGATTGAGATGAACGGTTTAGTTTATGAGTTTATAATTCGTGACAAGTCACATCCTCAATCGGAGAAAATTTATGAATGTTTGACATGGTTAACAAGACAGCTTGAAGTTATTGAGGTCGATACTTCTTTATTCAAAGAATTTTCCTCTTGGTGTTAATCTAGGTTGCCAGATTTGAGTTGAGAAACCTACCAAGCTCGCTCTCACATGCTTGTGCTTGAAAGAACAATCATGGATAGCTATCTAGCACCCTGAAGGATTTCCAGGCTACAAGGATTTGAAAATTTGGACATATCCTTTGAAATCTTGGGTTCAAGCCTCTTGAGACTTAAACCATTTCATTATCTCCCACAGATAGGCCTTGAGTGGGTGAAGTCTATCTGAAGATTAATGAGAGATGGGCTATACGTATAATACAAGGAGCCGGGCCCTTCGACACCCAGTTTAAAAAATGTTAGTTAATAAAAGAAAGTTTTCTATTCTAGTTCAAGGATTTTTGGGGCAAGGAGTTGAATAGTGAGTTCCTAGAAATTATAGGGAGTTTTGAACTCTTAGACCCACGATGTAATGAGTTGATAAGATATAAAATTGATGTTTTTTAGTGGGATCCACAAACTCCTTTGACCAAACAAGGAGTGGAGTTCACAACTTCTACTTCGCAACTCCTTGGGCCAAACACACCCAAATTGATATGATTCTCTTTGTTAACGATGATGATGTTCTACCTCTAGTAGTCCAAAAAGTGCTTCTGCAGGAAGATCTTGATTTGAAGAAACTTCTGAATGTTATATTTGAAGCATGGTATCGACTTGGCAAGAACTTCAAACAGTTGAACTGAAATGTTAGCCAGATTTTGAAGATGGCCTACTCAATGTTAAAAGTGCTCTTTGGGATGTATGCTCTAAAAAATGATCTTGTGGCAAGGATGGCACTTAGAAAAAAAAATGAATCTTACTGGGTTTAAGGGAGTTTCCAGTAGAGTAGTGAAATGCATAGAGATATGAAAGATTACAACGAACACTTGCACTTTGCTGGCCCGATACAGACACCGAGTGGTAAAAGCTAGGGGAGTGAATGAGATTAGATACCCACAAAGCACTAGCTGTAAGTGATGAATAGTTGGTATGTTGTGCGTGTTGATTTGTTCGGTGCTAGAGCCAACACACTAAATAAACTTAAAAGAAATTGATGGAGTCCACACAAAATCTTTATGGTTTCTCGATGGATATTCCTGAATATCGACATTGGAAAGAAAAAGGCGAGGAGATGATTGGCCTTGGTTTCTCATCTAAGATGTCAGAAGAATGATGGAAAAAGTCGCATCCAATCATCCCATAACTATATATGACATGGGGTAAGTTATTTCTTTCGAATCAAGTGTCATATGCAACTATAGATACCAATGTGTCTACATAAATTTTAGAATATAGTTAAAAGTTCTTTTTCTTGTGACGTAAGTTAAATTATATCGAAATACGAATTTGCTAGTAACTACAAGAATTGTAATTCGAATTCCTCTACCCAATTGTACTAATATATATTTATGTGTATGTTTCAAGTAAAGAAGAATGACCCTACAAAAGTTAAAAAGGTGAAGATCGTATTTGAAATAAGAATGTGGAATATAAT

Coding sequence (CDS)

ATGATCAATCTTAATGTCAGCAATCTCATCTTTAGATATCTGCATTTCGTCCCAAGATCAACATTTCAAATCCCCTTCATTTTCCTACTCCACACTCACTCTCTTCCACATCACAAAGATAAACCCACCAATTGGAACGCATCTCACGTTCTGATTCAATCCAACCCACTTCTCTCCCTCTTAGAAGCATGCTCTTCTATGGCGCAAATGAAGCAAATTCACGCCCAAATGATTTCAACTGGCTTGATCTCAGATGGGTTTGCTCTGAGTCGCCTCGTTGCTTTCTGTGCGATTTCAGAATGGCGAAATTTGGACTATTGTGACAAAATTCTTAACAATGCTGCAAACCCAAATGTTTTTTCTTGGAATATGGCGATTAGGGGCTATATAGAGAGTGAAAATCCCAGATATGCCGTTCTTTTGTACAGGAATATGCTTAGAAAAGGTAGTGCGACTCCTGATAATTATACGTATCCTCTGTTGTTCAAAGTTTGTGCCGGTTTTTCGTTGAGTTGCACTGCTAATGAGATTCTTGGGCATGTAATACAGTTGGGTTTTGATTCGGATTTGTTTGTGCACAATGCAATCATTCATGTGTTGGTTTCATGTGGAGAATTGTTAGCTGCACGTAAGGTATTCGATGAAAGTTGTGTGAGAGATTTGGTTTCTTGGAACTCCATTATCAATGGATACGTTCGGTGTGGTCTGGCAGACGAGGCGTTGGATCTTTATTACAAGATGGGGGAACTGAATGTGATGCCAGATGAGGTCACAATGATTGGAGTCGTTTCAGCTTCTGCTCAGCTTGAAAATTTAGCTCTTGGAAGAAAGCTTCATCAATTCATTGAAGAAATGGGTTTGAATTTGACCGTTCCACTTGCCAATGCGTTGATGGATATGTATATTAAGTGTAAGAATATTGAGGCTGCGAAAATACTATTTGAGAACATGCCAAAGAAAACTGTTGTTTCATGGACTATAATGGTTGTTGGATATGCCAAATTTGGGTTGTTGGAAAGTGCTGTGAGGCTGTTCAATGAGATGCCAGAGAAGGATGTTGTGCCATGGAATGCTCTAATTGGTGGCTTTGTTCAAGCCAAGCGTAGTAAGGAGGCTTTGGCTTTGTTTCATGAAATGCAGGCCAGCAACGTTGCCCCGGATGGGGTTACTGTCGTTAACTGTTTATCTGCGTGCTCTCAACTTGGAGCACTTGATGTTGGAATTTGGATGCACCATTATGTCGATAAACACGATCTTACTATGAATGTTGCCTTAGGAACTGCTTTAGTTGACATGTATGCTAAGTGTGGGAACATTAAAAAGGCTATACAGGTTTTTGAGGAGATGCCAGGAAGAAACTCGTTGACATGGACAGCTATAATTTGTGGTCTAGCACTTCACGGACAAGCACATGCTGCCATATCTTACTTCTCAGAGATGATTAGCATTGGACTAGTGCCTGACGAGATCACCTTCATTGGGGTCCTATCAGCTTGTTGTCACGGTGGCCTGGTTGATCAAGGACGAGACTATTTTTACCAAATGAGCTCTAAATTTGGTATTTCCCCAAAACTTAAGCATTATTCTTGTTTGGTGGACCTTCTAGGTAGGGCTGGCTTCTTGGAAGAAGCAGAAGAGCTTATTAGGAGCATGCCTTTCGAACCTGATGCTGTAGTGTGGGGAGCATTGTTCTTTGGCAGCCGTATTCACGGAAATGTTCATATGGGAGAAAGAGCCGCTTCTAAGCTTCTTGAGTTGGATCCTCATGATAGTGGAATTTATGTTTTGCTTGCTAATATGTATGGTGATGCTAATATGTGGGAGCAGGCAAGGAAGGTAAGAAAGATGATGGAAGAAAGAGGGGTAGAGAAAACACCAGGTTGTAGTTCGATTGAGATGAACGGTTTAGTTTATGAGTTTATAATTCGTGACAAGTCACATCCTCAATCGGAGAAAATTTATGAATGTTTGACATGGTTAACAAGACAGCTTGAAGTTATTGAGGTCGATACTTCTTTATTCAAAGAATTTTCCTCTTGGTGTTAA

Protein sequence

MINLNVSNLIFRYLHFVPRSTFQIPFIFLLHTHSLPHHKDKPTNWNASHVLIQSNPLLSLLEACSSMAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVFSWNMAIRGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEALDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALIGGFVQAKRSKEALALFHEMQASNVAPDGVTVVNCLSACSQLGALDVGIWMHHYVDKHDLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKIYECLTWLTRQLEVIEVDTSLFKEFSSWC

Homology

[Close]

BLAST of Cmc02g0043221 vs. NCBI nr
Match: KAA0059090.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18838.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1393.3 bits (3605), Expect = 0.0e+00
Identity = 681/681 (100.00%), Postives = 681/681 (100.00%), Query Frame = 0


Query: 1   MINLNVSNLIFRYLHFVPRSTFQIPFIFLLHTHSLPHHKDKPTNWNASHVLIQSNPLLSL 60
           MINLNVSNLIFRYLHFVPRSTFQIPFIFLLHTHSLPHHKDKPTNWNASHVLIQSNPLLSL
Sbjct: 1   MINLNVSNLIFRYLHFVPRSTFQIPFIFLLHTHSLPHHKDKPTNWNASHVLIQSNPLLSL 60

Query: 61  LEACSSMAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVF 120
           LEACSSMAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVF
Sbjct: 61  LEACSSMAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVF 120

Query: 121 SWNMAIRGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGH 180
           SWNMAIRGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGH
Sbjct: 121 SWNMAIRGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGH 180

Query: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEA 240
           VIQLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEA
Sbjct: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEA 240

Query: 241 LDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDM 300
           LDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDM
Sbjct: 241 LDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDM 300

Query: 301 YIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALI 360
           YIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALI
Sbjct: 301 YIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALI 360

Query: 361 GGFVQAKRSKEALALFHEMQASNVAPDGVTVVNCLSACSQLGALDVGIWMHHYVDKHDLT 420
           GGFVQAKRSKEALALFHEMQASNVAPDGVTVVNCLSACSQLGALDVGIWMHHYVDKHDLT
Sbjct: 361 GGFVQAKRSKEALALFHEMQASNVAPDGVTVVNCLSACSQLGALDVGIWMHHYVDKHDLT 420

Query: 421 MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM 480
           MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM
Sbjct: 421 MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM 480

Query: 481 ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGF 540
           ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGF
Sbjct: 481 ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGF 540

Query: 541 LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANM 600
           LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANM
Sbjct: 541 LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANM 600

Query: 601 YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKIYECLTWL 660
           YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKIYECLTWL
Sbjct: 601 YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKIYECLTWL 660

Query: 661 TRQLEVIEVDTSLFKEFSSWC 682
           TRQLEVIEVDTSLFKEFSSWC
Sbjct: 661 TRQLEVIEVDTSLFKEFSSWC 681

[Close]

BLAST of Cmc02g0043221 vs. NCBI nr
Match: XP_008450440.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucumis melo])

HSP 1 Score: 1391.7 bits (3601), Expect = 0.0e+00
Identity = 680/681 (99.85%), Postives = 680/681 (99.85%), Query Frame = 0


Query: 1   MINLNVSNLIFRYLHFVPRSTFQIPFIFLLHTHSLPHHKDKPTNWNASHVLIQSNPLLSL 60
           MINLNVSNLIFRYLHFVPRSTFQIPFIFLLHTHSLPHHKDKPTNWNASHVLIQSNPLLSL
Sbjct: 1   MINLNVSNLIFRYLHFVPRSTFQIPFIFLLHTHSLPHHKDKPTNWNASHVLIQSNPLLSL 60

Query: 61  LEACSSMAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVF 120
           LEACSSMAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVF
Sbjct: 61  LEACSSMAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVF 120

Query: 121 SWNMAIRGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGH 180
           SWNMAIRGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGH
Sbjct: 121 SWNMAIRGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGH 180

Query: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEA 240
           VIQLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEA
Sbjct: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEA 240

Query: 241 LDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDM 300
           LDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDM
Sbjct: 241 LDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDM 300

Query: 301 YIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALI 360
           YIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALI
Sbjct: 301 YIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALI 360

Query: 361 GGFVQAKRSKEALALFHEMQASNVAPDGVTVVNCLSACSQLGALDVGIWMHHYVDKHDLT 420
           GGFVQAKRSKEALALFHEMQASNVAPDGVT VNCLSACSQLGALDVGIWMHHYVDKHDLT
Sbjct: 361 GGFVQAKRSKEALALFHEMQASNVAPDGVTAVNCLSACSQLGALDVGIWMHHYVDKHDLT 420

Query: 421 MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM 480
           MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM
Sbjct: 421 MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM 480

Query: 481 ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGF 540
           ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGF
Sbjct: 481 ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGF 540

Query: 541 LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANM 600
           LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANM
Sbjct: 541 LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANM 600

Query: 601 YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKIYECLTWL 660
           YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKIYECLTWL
Sbjct: 601 YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKIYECLTWL 660

Query: 661 TRQLEVIEVDTSLFKEFSSWC 682
           TRQLEVIEVDTSLFKEFSSWC
Sbjct: 661 TRQLEVIEVDTSLFKEFSSWC 681

[Close]

BLAST of Cmc02g0043221 vs. NCBI nr
Match: XP_004139112.1 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucumis sativus] >XP_031736159.1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucumis sativus] >KGN66476.1 hypothetical protein Csa_007597 [Cucumis sativus])

HSP 1 Score: 1326.6 bits (3432), Expect = 0.0e+00
Identity = 650/681 (95.45%), Postives = 664/681 (97.50%), Query Frame = 0


Query: 1   MINLNVSNLIFRYLHFVPRSTFQIPFIFLLHTHSLPHHKDKPTNWNASHVLIQSNPLLSL 60
           MINL+VSNLIFRY HFVPRSTFQIPFIFLLHT SLPHHKDKPTNWNASHVLIQSNPLLSL
Sbjct: 1   MINLSVSNLIFRYPHFVPRSTFQIPFIFLLHTRSLPHHKDKPTNWNASHVLIQSNPLLSL 60

Query: 61  LEACSSMAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVF 120
           LEAC+SMA+MK+IHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAAN NVF
Sbjct: 61  LEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNVF 120

Query: 121 SWNMAIRGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGH 180
           SWNMAIRGY+ESENP  AVLLYRNMLRKGSA PDNYTYPLLFKVCAGFSLS TANEILGH
Sbjct: 121 SWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGH 180

Query: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEA 240
           VIQLGFDSDLFVHNAIIHVLVSCGELLAARK+FDESCVRDLVSWNSIINGYVRCGLADEA
Sbjct: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEA 240

Query: 241 LDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDM 300
            DLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQ IEEMGLNLTVPLANALMDM
Sbjct: 241 FDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDM 300

Query: 301 YIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALI 360
           YIKCKNIEAAKILFENM KKTVVSWT MV+GYAKFGLLESAVRLFNEMPEKDVV WNALI
Sbjct: 301 YIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALI 360

Query: 361 GGFVQAKRSKEALALFHEMQASNVAPDGVTVVNCLSACSQLGALDVGIWMHHYVDKHDLT 420
           GGFVQAKRSKEALALFHEMQAS+VAPD +TVVNCLSACSQLGALDVGIWMHHYVDKH+LT
Sbjct: 361 GGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLT 420

Query: 421 MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM 480
           MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQ HAAISYFSEM
Sbjct: 421 MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEM 480

Query: 481 ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGF 540
           ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQM+SK+GISPKLKHYSCLVDLLGRAGF
Sbjct: 481 ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGF 540

Query: 541 LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANM 600
           LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHD GIYVLLANM
Sbjct: 541 LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANM 600

Query: 601 YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKIYECLTWL 660
           YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVY+FIIRDKSHPQSEKIYECLT L
Sbjct: 601 YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRL 660

Query: 661 TRQLEVIEVDTSLFKEFSSWC 682
           TRQ+EVIEVD SLFKEFSSWC
Sbjct: 661 TRQIEVIEVDPSLFKEFSSWC 681

[Close]

BLAST of Cmc02g0043221 vs. NCBI nr
Match: XP_038878576.1 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Benincasa hispida] >XP_038878577.1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Benincasa hispida] >XP_038878578.1 pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Benincasa hispida])

HSP 1 Score: 1286.2 bits (3327), Expect = 0.0e+00
Identity = 629/681 (92.36%), Postives = 651/681 (95.59%), Query Frame = 0


Query: 1   MINLNVSNLIFRYLHFVPRSTFQIPFIFLLHTHSLPHHKDKPTNWNASHVLIQSNPLLSL 60
           MINLNVS LIFRY H V RS FQIPFI LLHTHSLPHHKDKPTNWN SHVLIQSNPLLSL
Sbjct: 1   MINLNVSTLIFRYPHLVSRSPFQIPFILLLHTHSLPHHKDKPTNWNTSHVLIQSNPLLSL 60

Query: 61  LEACSSMAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVF 120
           LE C+SMAQM+QIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKIL++AANPNVF
Sbjct: 61  LERCTSMAQMRQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILDDAANPNVF 120

Query: 121 SWNMAIRGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGH 180
           SWN+AIRGY+ESENPR A+LLYR MLRKG + PDNYTYPLLFKVCAG SLS TANEILGH
Sbjct: 121 SWNVAIRGYLESENPRNAILLYRKMLRKGRSIPDNYTYPLLFKVCAGLSLSWTANEILGH 180

Query: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEA 240
           V+QLGF SDLFVHNAIIHVLVS GELLAARKVFD+SCVRDLVSWNSIINGYVRCGLADEA
Sbjct: 181 VLQLGFGSDLFVHNAIIHVLVSSGELLAARKVFDKSCVRDLVSWNSIINGYVRCGLADEA 240

Query: 241 LDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDM 300
           LDLYYKMGEL V PDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDM
Sbjct: 241 LDLYYKMGELKVKPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDM 300

Query: 301 YIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALI 360
           YIKCK+IEAAKILFENM KKT+VSWT MVVGYAKFGL ESAVRLFNEMPEKDVVPWNALI
Sbjct: 301 YIKCKDIEAAKILFENMTKKTIVSWTTMVVGYAKFGLFESAVRLFNEMPEKDVVPWNALI 360

Query: 361 GGFVQAKRSKEALALFHEMQASNVAPDGVTVVNCLSACSQLGALDVGIWMHHYVDKHDLT 420
           GGFVQAKRSKEALALFHEMQ+SNV PD VTVVNCLSACSQLGALDVGIWMHHYVDKH+LT
Sbjct: 361 GGFVQAKRSKEALALFHEMQSSNVDPDEVTVVNCLSACSQLGALDVGIWMHHYVDKHNLT 420

Query: 421 MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM 480
           MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAH AISYFSEM
Sbjct: 421 MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHTAISYFSEM 480

Query: 481 ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGF 540
           ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSK+GISPKLKHYSCLVDLLGRAGF
Sbjct: 481 ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKYGISPKLKHYSCLVDLLGRAGF 540

Query: 541 LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANM 600
           LEEAEELI+SMPFE DAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANM
Sbjct: 541 LEEAEELIKSMPFEADAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANM 600

Query: 601 YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKIYECLTWL 660
           YGDANMWEQARK+RKMMEERGVEKTPGCSSIE+NGLVYEFII DKSHPQSEKIYECLT L
Sbjct: 601 YGDANMWEQARKIRKMMEERGVEKTPGCSSIEINGLVYEFIICDKSHPQSEKIYECLTRL 660

Query: 661 TRQLEVIEVDTSLFKEFSSWC 682
           TRQLE++EV+ S FK+FSS C
Sbjct: 661 TRQLELVEVEISSFKDFSSLC 681

[Close]

BLAST of Cmc02g0043221 vs. NCBI nr
Match: XP_023531862.1 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1268.8 bits (3282), Expect = 0.0e+00
Identity = 611/677 (90.25%), Postives = 644/677 (95.13%), Query Frame = 0


Query: 1   MINLNVSNLIFRYLHFVPRSTFQIPFIFLLHTHSLPHHKDKPTNWNASHVLIQSNPLLSL 60
           MINLNVSNL FRY H VPRS+FQIP IFLLHTHSLPHHKDKPTNWN SH LIQSNPLLSL
Sbjct: 1   MINLNVSNLFFRYPHLVPRSSFQIPIIFLLHTHSLPHHKDKPTNWNTSHALIQSNPLLSL 60

Query: 61  LEACSSMAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVF 120
           LE C+SM QM+QIHAQM+STGLISDGFALSRLVAFCAISEWRNLDYCDK+L+NA NPNVF
Sbjct: 61  LEKCTSMTQMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPNPNVF 120

Query: 121 SWNMAIRGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGH 180
           SWN+AIRGY+ESENPRYAV LYR MLRKG + PDNY+YPLLFK CAG SLS TANEILGH
Sbjct: 121 SWNVAIRGYLESENPRYAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGH 180

Query: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEA 240
           V+ LGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEA
Sbjct: 181 VVHLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEA 240

Query: 241 LDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDM 300
           L+LYYKM EL V PDEVTMIG+VSASAQLEN+ALGRKLHQFIEEMGLNLT+PL NALMDM
Sbjct: 241 LNLYYKMEELKVKPDEVTMIGLVSASAQLENVALGRKLHQFIEEMGLNLTIPLVNALMDM 300

Query: 301 YIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALI 360
           YIKCKNIEAA+ LFENM KKT+VSWT MVVGYAK G+LESAVRLFNEMPEKDVVPWNALI
Sbjct: 301 YIKCKNIEAAETLFENMTKKTIVSWTTMVVGYAKCGMLESAVRLFNEMPEKDVVPWNALI 360

Query: 361 GGFVQAKRSKEALALFHEMQASNVAPDGVTVVNCLSACSQLGALDVGIWMHHYVDKHDLT 420
           GGFVQAKRSKEALALFHEMQASNV PD VTVV+CLSACSQLGALDVGIWMHH+VDK +LT
Sbjct: 361 GGFVQAKRSKEALALFHEMQASNVDPDEVTVVSCLSACSQLGALDVGIWMHHFVDKQNLT 420

Query: 421 MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM 480
           MNVALGTALVDMYAKCGNIKKA+QVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM
Sbjct: 421 MNVALGTALVDMYAKCGNIKKALQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM 480

Query: 481 ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGF 540
           +SIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSK+GISPKLKHYSC+VDLLGRAGF
Sbjct: 481 VSIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKYGISPKLKHYSCMVDLLGRAGF 540

Query: 541 LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANM 600
           LEEAEE+IRSMPFE DAVVWGALFFGSR+HGNVH+GERAA KLLELDPHDSGIYVLLANM
Sbjct: 541 LEEAEEIIRSMPFEADAVVWGALFFGSRMHGNVHIGERAAFKLLELDPHDSGIYVLLANM 600

Query: 601 YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKIYECLTWL 660
           YGDANMWE+ARKVRKMMEERGVEKTPGCSSIE+NGLVYEFIIRDKSHPQSEKIYECLTWL
Sbjct: 601 YGDANMWEKARKVRKMMEERGVEKTPGCSSIEINGLVYEFIIRDKSHPQSEKIYECLTWL 660

Query: 661 TRQLEVIEVDTSLFKEF 678
           TRQLE++E +TS  KEF
Sbjct: 661 TRQLELVEDETSSLKEF 677

[Close]

BLAST of Cmc02g0043221 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 827.8 bits (2137), Expect = 9.0e-239
Identity = 392/635 (61.73%), Postives = 495/635 (77.95%), Query Frame = 0


Query: 32  THSLPHHKDKPTNWNASHVLIQSNPLLSLLEACSSMAQMKQIHAQMISTGLISDGFALSR 91
           T SLPHH+DKP NWN++H  +  NPLLSLLE C  +  +KQI AQMI  GLI D FA SR
Sbjct: 31  TRSLPHHRDKPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSR 90

Query: 92  LVAFCAISEWRNLDYCDKILNNAANPNVFSWNMAIRGYIESENPRYAVLLYRNMLRKG-- 151
           L+AFCA+SE R LDY  KIL    NPN+FSWN+ IRG+ ESENP+ + LLY+ MLR G  
Sbjct: 91  LIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCC 150

Query: 152 SATPDNYTYPLLFKVCAGFSLSCTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAA 211
            + PD++TYP+LFKVCA   LS   + ILGHV++L  +    VHNA IH+  SCG++  A
Sbjct: 151 ESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENA 210

Query: 212 RKVFDESCVRDLVSWNSIINGYVRCGLADEALDLYYKMGELNVMPDEVTMIGVVSASAQL 271
           RKVFDES VRDLVSWN +INGY + G A++A+ +Y  M    V PD+VTMIG+VS+ + L
Sbjct: 211 RKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSML 270

Query: 272 ENLALGRKLHQFIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMPKKTVVSWTIMV 331
            +L  G++ +++++E GL +T+PL NALMDM+ KC +I  A+ +F+N+ K+T+VSWT M+
Sbjct: 271 GDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMI 330

Query: 332 VGYAKFGLLESAVRLFNEMPEKDVVPWNALIGGFVQAKRSKEALALFHEMQASNVAPDGV 391
            GYA+ GLL+ + +LF++M EKDVV WNA+IGG VQAKR ++ALALF EMQ SN  PD +
Sbjct: 331 SGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEI 390

Query: 392 TVVNCLSACSQLGALDVGIWMHHYVDKHDLTMNVALGTALVDMYAKCGNIKKAIQVFEEM 451
           T+++CLSACSQLGALDVGIW+H Y++K+ L++NVALGT+LVDMYAKCGNI +A+ VF  +
Sbjct: 391 TMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGI 450

Query: 452 PGRNSLTWTAIICGLALHGQAHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGR 511
             RNSLT+TAII GLALHG A  AISYF+EMI  G+ PDEITFIG+LSACCHGG++  GR
Sbjct: 451 QTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGR 510

Query: 512 DYFYQMSSKFGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRI 571
           DYF QM S+F ++P+LKHYS +VDLLGRAG LEEA+ L+ SMP E DA VWGAL FG R+
Sbjct: 511 DYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRM 570

Query: 572 HGNVHMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCS 631
           HGNV +GE+AA KLLELDP DSGIYVLL  MYG+ANMWE A++ R+MM ERGVEK PGCS
Sbjct: 571 HGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCS 630

Query: 632 SIEMNGLVYEFIIRDKSHPQSEKIYECLTWLTRQL 665
           SIE+NG+V EFI+RDKS P+SEKIY+ L  L R +
Sbjct: 631 SIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHM 665

[Close]

BLAST of Cmc02g0043221 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 8.1e-155
Identity = 263/622 (42.28%), Postives = 399/622 (64.15%), Query Frame = 0


Query: 34  SLPHHKDKPTNWNASHVLIQSNPLLSLLEACSSMAQMKQIHAQMISTGLISDGFALSRLV 93
           SLP H +  +N N      + +  +SL+E C S+ Q+KQ H  MI TG  SD ++ S+L 
Sbjct: 11  SLPRHPNF-SNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLF 70

Query: 94  AFCAISEWRNLDYCDKILNNAANPNVFSWNMAIRGYIESENPRYAVLLYRNMLRKGSATP 153
           A  A+S + +L+Y  K+ +    PN F+WN  IR Y    +P  ++  + +M+ +    P
Sbjct: 71  AMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYP 130

Query: 154 DNYTYPLLFKVCAGFSLSCTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKVF 213
           + YT+P L K  A  S       + G  ++    SD+FV N++IH   SCG+L +A KVF
Sbjct: 131 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 190

Query: 214 DESCVRDLVSWNSIINGYVRCGLADEALDLYYKMGELNVMPDEVTMIGVVSASAQLENLA 273
                +D+VSWNS+ING+V+ G  D+AL+L+ KM   +V    VTM+GV+SA A++ NL 
Sbjct: 191 TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLE 250

Query: 274 LGRKLHQFIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMPKKTVVSWTIMVVGYA 333
            GR++  +IEE  +N+ + LANA++DMY KC +IE AK LF+ M +K  V+WT M+ GYA
Sbjct: 251 FGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA 310

Query: 334 KFGLLESAVRLFNEMPEKDVVPWNALIGGFVQAKRSKEALALFHEMQ-ASNVAPDGVTVV 393
                E+A  + N MP+KD+V WNALI  + Q  +  EAL +FHE+Q   N+  + +T+V
Sbjct: 311 ISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLV 370

Query: 394 NCLSACSQLGALDVGIWMHHYVDKHDLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGR 453
           + LSAC+Q+GAL++G W+H Y+ KH + MN  + +AL+ MY+KCG+++K+ +VF  +  R
Sbjct: 371 STLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR 430

Query: 454 NSLTWTAIICGLALHGQAHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYF 513
           +   W+A+I GLA+HG  + A+  F +M    + P+ +TF  V  AC H GLVD+    F
Sbjct: 431 DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF 490

Query: 514 YQMSSKFGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGN 573
           +QM S +GI P+ KHY+C+VD+LGR+G+LE+A + I +MP  P   VWGAL    +IH N
Sbjct: 491 HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 550

Query: 574 VHMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIE 633
           +++ E A ++LLEL+P + G +VLL+N+Y     WE   ++RK M   G++K PGCSSIE
Sbjct: 551 LNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIE 610

Query: 634 MNGLVYEFIIRDKSHPQSEKIY 655
           ++G+++EF+  D +HP SEK+Y
Sbjct: 611 IDGMIHEFLSGDNAHPMSEKVY 631

[Close]

BLAST of Cmc02g0043221 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 7.1e-143
Identity = 270/683 (39.53%), Postives = 394/683 (57.69%), Query Frame = 0


Query: 17  VPRSTFQIPFIFLLHTHSLPHHKDKPTNWNASHVLIQSNPLLSLLEACSSMAQMKQIHAQ 76
           VP S++  PF      H LP   D P      +  I+++P LSLL  C ++  ++ IHAQ
Sbjct: 10  VPSSSY--PF------HFLPSSSDPP------YDSIRNHPSLSLLHNCKTLQSLRIIHAQ 69

Query: 77  MISTGLISDGFALSRLVAFCAIS-EWRNLDYCDKILNNAANPNVFSWNMAIRGYIESENP 136
           MI  GL +  +ALS+L+ FC +S  +  L Y   +      PN+  WN   RG+  S +P
Sbjct: 70  MIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDP 129

Query: 137 RYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGHVIQLGFDSDLFVHNA 196
             A+ LY  M+  G   P++YT+P + K CA         +I GHV++LG D DL+VH +
Sbjct: 130 VSALKLYVCMISLG-LLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTS 189

Query: 197 IIHVLVSCGELLAARKVFDES-------------------------------CVRDLVSW 256
           +I + V  G L  A KVFD+S                                V+D+VSW
Sbjct: 190 LISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSW 249

Query: 257 NSIINGYVRCGLADEALDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEE 316
           N++I+GY   G   EAL+L+  M + NV PDE TM+ VVSA AQ  ++ LGR++H +I++
Sbjct: 250 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD 309

Query: 317 MGLNLTVPLANALMDMYIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRL 376
            G    + + NAL+D+Y KC                               G LE+A  L
Sbjct: 310 HGFGSNLKIVNALIDLYSKC-------------------------------GELETACGL 369

Query: 377 FNEMPEKDVVPWNALIGGFVQAKRSKEALALFHEMQASNVAPDGVTVVNCLSACSQLGAL 436
           F  +P KDV+ WN LIGG+      KEAL LF EM  S   P+ VT+++ L AC+ LGA+
Sbjct: 370 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 429

Query: 437 DVGIWMHHYVDKH--DLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIIC 496
           D+G W+H Y+DK    +T   +L T+L+DMYAKCG+I+ A QVF  +  ++  +W A+I 
Sbjct: 430 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 489

Query: 497 GLALHGQAHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGIS 556
           G A+HG+A A+   FS M  IG+ PD+ITF+G+LSAC H G++D GR  F  M+  + ++
Sbjct: 490 GFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMT 549

Query: 557 PKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASK 616
           PKL+HY C++DLLG +G  +EAEE+I  M  EPD V+W +L    ++HGNV +GE  A  
Sbjct: 550 PKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAEN 609

Query: 617 LLELDPHDSGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFII 666
           L++++P + G YVLL+N+Y  A  W +  K R ++ ++G++K PGCSSIE++ +V+EFII
Sbjct: 610 LIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFII 646

[Close]

BLAST of Cmc02g0043221 vs. ExPASy Swiss-Prot
Match: Q9LSB8 (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E51 PE=3 SV=2)

HSP 1 Score: 482.6 bits (1241), Expect = 7.1e-135
Identity = 237/608 (38.98%), Postives = 378/608 (62.17%), Query Frame = 0


Query: 58  LSLLEACSSMAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANP 117
           +S+L  C +  Q KQ+H+Q I+ G+  +     +L  F       ++ Y  K+      P
Sbjct: 38  ISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEP 97

Query: 118 NVFSWNMAIRGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCA--GFSLSCTAN 177
           +V  WN  I+G+ + +     V LY NML++G  TPD++T+P L       G +L+C   
Sbjct: 98  DVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEG-VTPDSHTFPFLLNGLKRDGGALAC-GK 157

Query: 178 EILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCG 237
           ++  HV++ G  S+L+V NA++ +   CG +  AR VFD  C  D+ SWN +I+GY R  
Sbjct: 158 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMK 217

Query: 238 LADEALDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLAN 297
             +E+++L  +M    V P  VT++ V+SA +++++  L +++H+++ E     ++ L N
Sbjct: 218 EYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLEN 277

Query: 298 ALMDMYIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVP 357
           AL++ Y  C  ++ A  +F +M  + V+SWT +V GY + G L+ A   F++MP +D + 
Sbjct: 278 ALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRIS 337

Query: 358 WNALIGGFVQAKRSKEALALFHEMQASNVAPDGVTVVNCLSACSQLGALDVGIWMHHYVD 417
           W  +I G+++A    E+L +F EMQ++ + PD  T+V+ L+AC+ LG+L++G W+  Y+D
Sbjct: 338 WTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYID 397

Query: 418 KHDLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAIS 477
           K+ +  +V +G AL+DMY KCG  +KA +VF +M  R+  TWTA++ GLA +GQ   AI 
Sbjct: 398 KNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIK 457

Query: 478 YFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLL 537
            F +M  + + PD+IT++GVLSAC H G+VDQ R +F +M S   I P L HY C+VD+L
Sbjct: 458 VFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDML 517

Query: 538 GRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYV 597
           GRAG ++EA E++R MP  P+++VWGAL   SR+H +  M E AA K+LEL+P +  +Y 
Sbjct: 518 GRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYA 577

Query: 598 LLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKIYE 657
           LL N+Y     W+  R+VR+ + +  ++KTPG S IE+NG  +EF+  DKSH QSE+IY 
Sbjct: 578 LLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYM 637

Query: 658 CLTWLTRQ 664
            L  L ++
Sbjct: 638 KLEELAQE 643

[Close]

BLAST of Cmc02g0043221 vs. ExPASy Swiss-Prot
Match: Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 4.6e-126
Identity = 225/583 (38.59%), Postives = 339/583 (58.15%), Query Frame = 0


Query: 72  QIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVFSWNMAIRGYIE 131
           QIH  ++  G   D F  + LV F A  E   LD   K+ +  +  NV SW   I GY  
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYA--ECGELDSARKVFDEMSERNVVSWTSMICGYAR 214

Query: 132 SENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGHVIQLGFDSDLF 191
            +  + AV L+  M+R    TP++ T   +   CA      T  ++   +   G + +  
Sbjct: 215 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 274

Query: 192 VHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEALDLYYKMGELN 251
           + +A++ + + C  +  A+++FDE    +L   N++ + YVR GL  EAL ++  M +  
Sbjct: 275 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 334

Query: 252 VMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDMYIKCKNIEAAK 311
           V PD ++M+  +S+ +QL N+  G+  H ++   G      + NAL+DMY+KC   + A 
Sbjct: 335 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 394

Query: 312 ILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALIGGFVQAKRSKE 371
            +F+ M  KTVV+W  +V GY + G +++A   F  MPEK++V WN +I G VQ    +E
Sbjct: 395 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEE 454

Query: 372 ALALFHEMQA-SNVAPDGVTVVNCLSACSQLGALDVGIWMHHYVDKHDLTMNVALGTALV 431
           A+ +F  MQ+   V  DGVT+++  SAC  LGALD+  W+++Y++K+ + ++V LGT LV
Sbjct: 455 AIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLV 514

Query: 432 DMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEMISIGLVPDEI 491
           DM+++CG+ + A+ +F  +  R+   WTA I  +A+ G A  AI  F +MI  GL PD +
Sbjct: 515 DMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGV 574

Query: 492 TFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGFLEEAEELIRS 551
            F+G L+AC HGGLV QG++ FY M    G+SP+  HY C+VDLLGRAG LEEA +LI  
Sbjct: 575 AFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIED 634

Query: 552 MPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQA 611
           MP EP+ V+W +L    R+ GNV M   AA K+  L P  +G YVLL+N+Y  A  W   
Sbjct: 635 MPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDM 694

Query: 612 RKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKI 654
            KVR  M+E+G+ K PG SSI++ G  +EF   D+SHP+   I
Sbjct: 695 AKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNI 735

[Close]

BLAST of Cmc02g0043221 vs. ExPASy TrEMBL
Match: A0A5A7UVG6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00300 PE=4 SV=1)

HSP 1 Score: 1393.3 bits (3605), Expect = 0.0e+00
Identity = 681/681 (100.00%), Postives = 681/681 (100.00%), Query Frame = 0


Query: 1   MINLNVSNLIFRYLHFVPRSTFQIPFIFLLHTHSLPHHKDKPTNWNASHVLIQSNPLLSL 60
           MINLNVSNLIFRYLHFVPRSTFQIPFIFLLHTHSLPHHKDKPTNWNASHVLIQSNPLLSL
Sbjct: 1   MINLNVSNLIFRYLHFVPRSTFQIPFIFLLHTHSLPHHKDKPTNWNASHVLIQSNPLLSL 60

Query: 61  LEACSSMAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVF 120
           LEACSSMAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVF
Sbjct: 61  LEACSSMAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVF 120

Query: 121 SWNMAIRGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGH 180
           SWNMAIRGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGH
Sbjct: 121 SWNMAIRGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGH 180

Query: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEA 240
           VIQLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEA
Sbjct: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEA 240

Query: 241 LDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDM 300
           LDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDM
Sbjct: 241 LDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDM 300

Query: 301 YIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALI 360
           YIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALI
Sbjct: 301 YIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALI 360

Query: 361 GGFVQAKRSKEALALFHEMQASNVAPDGVTVVNCLSACSQLGALDVGIWMHHYVDKHDLT 420
           GGFVQAKRSKEALALFHEMQASNVAPDGVTVVNCLSACSQLGALDVGIWMHHYVDKHDLT
Sbjct: 361 GGFVQAKRSKEALALFHEMQASNVAPDGVTVVNCLSACSQLGALDVGIWMHHYVDKHDLT 420

Query: 421 MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM 480
           MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM
Sbjct: 421 MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM 480

Query: 481 ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGF 540
           ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGF
Sbjct: 481 ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGF 540

Query: 541 LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANM 600
           LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANM
Sbjct: 541 LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANM 600

Query: 601 YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKIYECLTWL 660
           YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKIYECLTWL
Sbjct: 601 YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKIYECLTWL 660

Query: 661 TRQLEVIEVDTSLFKEFSSWC 682
           TRQLEVIEVDTSLFKEFSSWC
Sbjct: 661 TRQLEVIEVDTSLFKEFSSWC 681

[Close]

BLAST of Cmc02g0043221 vs. ExPASy TrEMBL
Match: A0A1S3BP74 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103492040 PE=4 SV=1)

HSP 1 Score: 1391.7 bits (3601), Expect = 0.0e+00
Identity = 680/681 (99.85%), Postives = 680/681 (99.85%), Query Frame = 0


Query: 1   MINLNVSNLIFRYLHFVPRSTFQIPFIFLLHTHSLPHHKDKPTNWNASHVLIQSNPLLSL 60
           MINLNVSNLIFRYLHFVPRSTFQIPFIFLLHTHSLPHHKDKPTNWNASHVLIQSNPLLSL
Sbjct: 1   MINLNVSNLIFRYLHFVPRSTFQIPFIFLLHTHSLPHHKDKPTNWNASHVLIQSNPLLSL 60

Query: 61  LEACSSMAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVF 120
           LEACSSMAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVF
Sbjct: 61  LEACSSMAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVF 120

Query: 121 SWNMAIRGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGH 180
           SWNMAIRGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGH
Sbjct: 121 SWNMAIRGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGH 180

Query: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEA 240
           VIQLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEA
Sbjct: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEA 240

Query: 241 LDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDM 300
           LDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDM
Sbjct: 241 LDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDM 300

Query: 301 YIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALI 360
           YIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALI
Sbjct: 301 YIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALI 360

Query: 361 GGFVQAKRSKEALALFHEMQASNVAPDGVTVVNCLSACSQLGALDVGIWMHHYVDKHDLT 420
           GGFVQAKRSKEALALFHEMQASNVAPDGVT VNCLSACSQLGALDVGIWMHHYVDKHDLT
Sbjct: 361 GGFVQAKRSKEALALFHEMQASNVAPDGVTAVNCLSACSQLGALDVGIWMHHYVDKHDLT 420

Query: 421 MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM 480
           MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM
Sbjct: 421 MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM 480

Query: 481 ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGF 540
           ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGF
Sbjct: 481 ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGF 540

Query: 541 LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANM 600
           LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANM
Sbjct: 541 LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANM 600

Query: 601 YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKIYECLTWL 660
           YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKIYECLTWL
Sbjct: 601 YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKIYECLTWL 660

Query: 661 TRQLEVIEVDTSLFKEFSSWC 682
           TRQLEVIEVDTSLFKEFSSWC
Sbjct: 661 TRQLEVIEVDTSLFKEFSSWC 681

[Close]

BLAST of Cmc02g0043221 vs. ExPASy TrEMBL
Match: A0A0A0M2R3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613480 PE=4 SV=1)

HSP 1 Score: 1326.6 bits (3432), Expect = 0.0e+00
Identity = 650/681 (95.45%), Postives = 664/681 (97.50%), Query Frame = 0


Query: 1   MINLNVSNLIFRYLHFVPRSTFQIPFIFLLHTHSLPHHKDKPTNWNASHVLIQSNPLLSL 60
           MINL+VSNLIFRY HFVPRSTFQIPFIFLLHT SLPHHKDKPTNWNASHVLIQSNPLLSL
Sbjct: 1   MINLSVSNLIFRYPHFVPRSTFQIPFIFLLHTRSLPHHKDKPTNWNASHVLIQSNPLLSL 60

Query: 61  LEACSSMAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVF 120
           LEAC+SMA+MK+IHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAAN NVF
Sbjct: 61  LEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNVF 120

Query: 121 SWNMAIRGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGH 180
           SWNMAIRGY+ESENP  AVLLYRNMLRKGSA PDNYTYPLLFKVCAGFSLS TANEILGH
Sbjct: 121 SWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGH 180

Query: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEA 240
           VIQLGFDSDLFVHNAIIHVLVSCGELLAARK+FDESCVRDLVSWNSIINGYVRCGLADEA
Sbjct: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEA 240

Query: 241 LDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDM 300
            DLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQ IEEMGLNLTVPLANALMDM
Sbjct: 241 FDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDM 300

Query: 301 YIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALI 360
           YIKCKNIEAAKILFENM KKTVVSWT MV+GYAKFGLLESAVRLFNEMPEKDVV WNALI
Sbjct: 301 YIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALI 360

Query: 361 GGFVQAKRSKEALALFHEMQASNVAPDGVTVVNCLSACSQLGALDVGIWMHHYVDKHDLT 420
           GGFVQAKRSKEALALFHEMQAS+VAPD +TVVNCLSACSQLGALDVGIWMHHYVDKH+LT
Sbjct: 361 GGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLT 420

Query: 421 MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM 480
           MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQ HAAISYFSEM
Sbjct: 421 MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEM 480

Query: 481 ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGF 540
           ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQM+SK+GISPKLKHYSCLVDLLGRAGF
Sbjct: 481 ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGF 540

Query: 541 LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANM 600
           LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHD GIYVLLANM
Sbjct: 541 LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANM 600

Query: 601 YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKIYECLTWL 660
           YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVY+FIIRDKSHPQSEKIYECLT L
Sbjct: 601 YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRL 660

Query: 661 TRQLEVIEVDTSLFKEFSSWC 682
           TRQ+EVIEVD SLFKEFSSWC
Sbjct: 661 TRQIEVIEVDPSLFKEFSSWC 681

[Close]

BLAST of Cmc02g0043221 vs. ExPASy TrEMBL
Match: A0A6J1HQQ6 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111466501 PE=4 SV=1)

HSP 1 Score: 1251.9 bits (3238), Expect = 0.0e+00
Identity = 604/677 (89.22%), Postives = 641/677 (94.68%), Query Frame = 0


Query: 1   MINLNVSNLIFRYLHFVPRSTFQIPFIFLLHTHSLPHHKDKPTNWNASHVLIQSNPLLSL 60
           MI+LNVSNLIFRY H VPRS FQIP IFLLHTHSLPHHKDKPTNWN SH LIQSNPLLSL
Sbjct: 1   MISLNVSNLIFRYQHLVPRSPFQIPIIFLLHTHSLPHHKDKPTNWNTSHALIQSNPLLSL 60

Query: 61  LEACSSMAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVF 120
           LE C+SM QM+QIHAQM+STGLISDGFALSRLVAFCAISEWRNLDYCDK+L+NA +PNVF
Sbjct: 61  LEKCTSMTQMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPSPNVF 120

Query: 121 SWNMAIRGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGH 180
           SWN+AIRGY+ESENPR AVLLYR MLRKG +TPDNY+YPLLFK CAG SLS TANEILGH
Sbjct: 121 SWNVAIRGYLESENPRNAVLLYRKMLRKGGSTPDNYSYPLLFKACAGLSLSFTANEILGH 180

Query: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEA 240
           V+QLG  SDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNS+INGYVRCGLADEA
Sbjct: 181 VVQLGLYSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEA 240

Query: 241 LDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDM 300
           L+LYYKM +L V PDEVTMIG+VSASAQLEN+ALGRKLHQF EEMGLNLT+PL NALMDM
Sbjct: 241 LNLYYKMEDLKVKPDEVTMIGLVSASAQLENVALGRKLHQFTEEMGLNLTIPLVNALMDM 300

Query: 301 YIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALI 360
           YIKCKNIEAAK LFENM KKT+VSWT MVVGYAK G+LESAV LFNEMPEKDVVPWNALI
Sbjct: 301 YIKCKNIEAAKTLFENMTKKTIVSWTTMVVGYAKCGMLESAVMLFNEMPEKDVVPWNALI 360

Query: 361 GGFVQAKRSKEALALFHEMQASNVAPDGVTVVNCLSACSQLGALDVGIWMHHYVDKHDLT 420
           GGFVQAKRSKEALALFHEMQASNV PD VTVV+CLSACSQLGALDVGIWMH +VDK +LT
Sbjct: 361 GGFVQAKRSKEALALFHEMQASNVDPDEVTVVSCLSACSQLGALDVGIWMHRFVDKQNLT 420

Query: 421 MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM 480
           MNVALGTALVDMYAKCGNIKKA+QVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM
Sbjct: 421 MNVALGTALVDMYAKCGNIKKALQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM 480

Query: 481 ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGF 540
           +SIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSK+GISPKLKHYSC+VDLLGRAGF
Sbjct: 481 VSIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKYGISPKLKHYSCMVDLLGRAGF 540

Query: 541 LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANM 600
           LEEAEE+IRSMPFE DAVVWGALFFGSR+HGNVH+GERAA KLLELDPHDSGIYVLLANM
Sbjct: 541 LEEAEEIIRSMPFEADAVVWGALFFGSRMHGNVHIGERAAFKLLELDPHDSGIYVLLANM 600

Query: 601 YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKIYECLTWL 660
           YGDANMWE+ARKVRKMMEERGVEKTPGCSSIE+NGLVYEFIIRDKSHP+SEK+YECLTWL
Sbjct: 601 YGDANMWEKARKVRKMMEERGVEKTPGCSSIEINGLVYEFIIRDKSHPRSEKMYECLTWL 660

Query: 661 TRQLEVIEVDTSLFKEF 678
           TRQLE++E +TS  KEF
Sbjct: 661 TRQLELVEDETSSLKEF 677

[Close]

BLAST of Cmc02g0043221 vs. ExPASy TrEMBL
Match: A0A6J1ELP9 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111434490 PE=4 SV=1)

HSP 1 Score: 1250.0 bits (3233), Expect = 0.0e+00
Identity = 601/677 (88.77%), Postives = 639/677 (94.39%), Query Frame = 0


Query: 1   MINLNVSNLIFRYLHFVPRSTFQIPFIFLLHTHSLPHHKDKPTNWNASHVLIQSNPLLSL 60
           MINLN SNLIFRY H VPRS FQ+P IFLLHTHSLPHHKDKPTNWN SH LIQSNPLLSL
Sbjct: 1   MINLNASNLIFRYPHLVPRSPFQVPIIFLLHTHSLPHHKDKPTNWNTSHALIQSNPLLSL 60

Query: 61  LEACSSMAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVF 120
           LE C+SMAQM+QIHAQM+STGLISDGFALSRLVAFCAISEWRNLDYCDK+L+NA NPN+F
Sbjct: 61  LEKCTSMAQMRQIHAQMVSTGLISDGFALSRLVAFCAISEWRNLDYCDKLLDNAPNPNIF 120

Query: 121 SWNMAIRGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGH 180
           SWN+AIRGY+ESENPR AV LYR MLRKG + PDNY+YPLLFK CAG SLS TANEILGH
Sbjct: 121 SWNVAIRGYLESENPRNAVFLYRKMLRKGGSIPDNYSYPLLFKACAGLSLSFTANEILGH 180

Query: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEA 240
           V+ LGF SDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNS+INGYVRCGLADEA
Sbjct: 181 VVHLGFYSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSMINGYVRCGLADEA 240

Query: 241 LDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDM 300
           L+LYYKM +L V PDEVTMIGVVSASAQLEN+ALGRKLHQFIEEMGLNLT+PL NALMDM
Sbjct: 241 LNLYYKMEDLKVKPDEVTMIGVVSASAQLENVALGRKLHQFIEEMGLNLTIPLVNALMDM 300

Query: 301 YIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALI 360
           YIKCKNIEAA+ LFENM KKT+VSWT MVVGYAK G+LESAVRLFNEMPEKDVVPWNALI
Sbjct: 301 YIKCKNIEAAETLFENMTKKTIVSWTTMVVGYAKCGMLESAVRLFNEMPEKDVVPWNALI 360

Query: 361 GGFVQAKRSKEALALFHEMQASNVAPDGVTVVNCLSACSQLGALDVGIWMHHYVDKHDLT 420
           GGFVQAKRSKEAL LFHEMQASNV PD VTVV+CLSACSQLGALDVGIWMH +VDK +LT
Sbjct: 361 GGFVQAKRSKEALTLFHEMQASNVDPDEVTVVSCLSACSQLGALDVGIWMHRFVDKQNLT 420

Query: 421 MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM 480
           MNVALGTALVDMYAKCGNIKKA+QVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM
Sbjct: 421 MNVALGTALVDMYAKCGNIKKALQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEM 480

Query: 481 ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGF 540
           +SIGLVPDEITFIGVLSACCHGGL DQGRDYFYQMSSK+GISPKLKHYSC+VDLLGRAGF
Sbjct: 481 VSIGLVPDEITFIGVLSACCHGGLADQGRDYFYQMSSKYGISPKLKHYSCMVDLLGRAGF 540

Query: 541 LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANM 600
           LEEAEE+IRSMPFE DAVVWGALFFGSR+HG+VH+GERAA KLLELDPHDSGIYVLLANM
Sbjct: 541 LEEAEEIIRSMPFEADAVVWGALFFGSRMHGSVHIGERAAFKLLELDPHDSGIYVLLANM 600

Query: 601 YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKIYECLTWL 660
           YGDANMWE+ARKVRKMME+RGVEKTPGCSSIE+NGLVYEFIIRDKSHP+SEKIYECLTWL
Sbjct: 601 YGDANMWEKARKVRKMMEQRGVEKTPGCSSIEINGLVYEFIIRDKSHPRSEKIYECLTWL 660

Query: 661 TRQLEVIEVDTSLFKEF 678
           TRQLE++E +TS  KEF
Sbjct: 661 TRQLELVEDETSSLKEF 677

[Close]

BLAST of Cmc02g0043221 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 827.8 bits (2137), Expect = 6.4e-240
Identity = 392/635 (61.73%), Postives = 495/635 (77.95%), Query Frame = 0


Query: 32  THSLPHHKDKPTNWNASHVLIQSNPLLSLLEACSSMAQMKQIHAQMISTGLISDGFALSR 91
           T SLPHH+DKP NWN++H  +  NPLLSLLE C  +  +KQI AQMI  GLI D FA SR
Sbjct: 31  TRSLPHHRDKPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSR 90

Query: 92  LVAFCAISEWRNLDYCDKILNNAANPNVFSWNMAIRGYIESENPRYAVLLYRNMLRKG-- 151
           L+AFCA+SE R LDY  KIL    NPN+FSWN+ IRG+ ESENP+ + LLY+ MLR G  
Sbjct: 91  LIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCC 150

Query: 152 SATPDNYTYPLLFKVCAGFSLSCTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAA 211
            + PD++TYP+LFKVCA   LS   + ILGHV++L  +    VHNA IH+  SCG++  A
Sbjct: 151 ESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENA 210

Query: 212 RKVFDESCVRDLVSWNSIINGYVRCGLADEALDLYYKMGELNVMPDEVTMIGVVSASAQL 271
           RKVFDES VRDLVSWN +INGY + G A++A+ +Y  M    V PD+VTMIG+VS+ + L
Sbjct: 211 RKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSML 270

Query: 272 ENLALGRKLHQFIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMPKKTVVSWTIMV 331
            +L  G++ +++++E GL +T+PL NALMDM+ KC +I  A+ +F+N+ K+T+VSWT M+
Sbjct: 271 GDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMI 330

Query: 332 VGYAKFGLLESAVRLFNEMPEKDVVPWNALIGGFVQAKRSKEALALFHEMQASNVAPDGV 391
            GYA+ GLL+ + +LF++M EKDVV WNA+IGG VQAKR ++ALALF EMQ SN  PD +
Sbjct: 331 SGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEI 390

Query: 392 TVVNCLSACSQLGALDVGIWMHHYVDKHDLTMNVALGTALVDMYAKCGNIKKAIQVFEEM 451
           T+++CLSACSQLGALDVGIW+H Y++K+ L++NVALGT+LVDMYAKCGNI +A+ VF  +
Sbjct: 391 TMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGI 450

Query: 452 PGRNSLTWTAIICGLALHGQAHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGR 511
             RNSLT+TAII GLALHG A  AISYF+EMI  G+ PDEITFIG+LSACCHGG++  GR
Sbjct: 451 QTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGR 510

Query: 512 DYFYQMSSKFGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRI 571
           DYF QM S+F ++P+LKHYS +VDLLGRAG LEEA+ L+ SMP E DA VWGAL FG R+
Sbjct: 511 DYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRM 570

Query: 572 HGNVHMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCS 631
           HGNV +GE+AA KLLELDP DSGIYVLL  MYG+ANMWE A++ R+MM ERGVEK PGCS
Sbjct: 571 HGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCS 630

Query: 632 SIEMNGLVYEFIIRDKSHPQSEKIYECLTWLTRQL 665
           SIE+NG+V EFI+RDKS P+SEKIY+ L  L R +
Sbjct: 631 SIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHM 665

[Close]

BLAST of Cmc02g0043221 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 548.9 bits (1413), Expect = 5.8e-156
Identity = 263/622 (42.28%), Postives = 399/622 (64.15%), Query Frame = 0


Query: 34  SLPHHKDKPTNWNASHVLIQSNPLLSLLEACSSMAQMKQIHAQMISTGLISDGFALSRLV 93
           SLP H +  +N N      + +  +SL+E C S+ Q+KQ H  MI TG  SD ++ S+L 
Sbjct: 11  SLPRHPNF-SNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLF 70

Query: 94  AFCAISEWRNLDYCDKILNNAANPNVFSWNMAIRGYIESENPRYAVLLYRNMLRKGSATP 153
           A  A+S + +L+Y  K+ +    PN F+WN  IR Y    +P  ++  + +M+ +    P
Sbjct: 71  AMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYP 130

Query: 154 DNYTYPLLFKVCAGFSLSCTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKVF 213
           + YT+P L K  A  S       + G  ++    SD+FV N++IH   SCG+L +A KVF
Sbjct: 131 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 190

Query: 214 DESCVRDLVSWNSIINGYVRCGLADEALDLYYKMGELNVMPDEVTMIGVVSASAQLENLA 273
                +D+VSWNS+ING+V+ G  D+AL+L+ KM   +V    VTM+GV+SA A++ NL 
Sbjct: 191 TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLE 250

Query: 274 LGRKLHQFIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMPKKTVVSWTIMVVGYA 333
            GR++  +IEE  +N+ + LANA++DMY KC +IE AK LF+ M +K  V+WT M+ GYA
Sbjct: 251 FGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA 310

Query: 334 KFGLLESAVRLFNEMPEKDVVPWNALIGGFVQAKRSKEALALFHEMQ-ASNVAPDGVTVV 393
                E+A  + N MP+KD+V WNALI  + Q  +  EAL +FHE+Q   N+  + +T+V
Sbjct: 311 ISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLV 370

Query: 394 NCLSACSQLGALDVGIWMHHYVDKHDLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGR 453
           + LSAC+Q+GAL++G W+H Y+ KH + MN  + +AL+ MY+KCG+++K+ +VF  +  R
Sbjct: 371 STLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR 430

Query: 454 NSLTWTAIICGLALHGQAHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYF 513
           +   W+A+I GLA+HG  + A+  F +M    + P+ +TF  V  AC H GLVD+    F
Sbjct: 431 DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF 490

Query: 514 YQMSSKFGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGN 573
           +QM S +GI P+ KHY+C+VD+LGR+G+LE+A + I +MP  P   VWGAL    +IH N
Sbjct: 491 HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 550

Query: 574 VHMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIE 633
           +++ E A ++LLEL+P + G +VLL+N+Y     WE   ++RK M   G++K PGCSSIE
Sbjct: 551 LNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIE 610

Query: 634 MNGLVYEFIIRDKSHPQSEKIY 655
           ++G+++EF+  D +HP SEK+Y
Sbjct: 611 IDGMIHEFLSGDNAHPMSEKVY 631

[Close]

BLAST of Cmc02g0043221 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 509.2 bits (1310), Expect = 5.1e-144
Identity = 270/683 (39.53%), Postives = 394/683 (57.69%), Query Frame = 0


Query: 17  VPRSTFQIPFIFLLHTHSLPHHKDKPTNWNASHVLIQSNPLLSLLEACSSMAQMKQIHAQ 76
           VP S++  PF      H LP   D P      +  I+++P LSLL  C ++  ++ IHAQ
Sbjct: 10  VPSSSY--PF------HFLPSSSDPP------YDSIRNHPSLSLLHNCKTLQSLRIIHAQ 69

Query: 77  MISTGLISDGFALSRLVAFCAIS-EWRNLDYCDKILNNAANPNVFSWNMAIRGYIESENP 136
           MI  GL +  +ALS+L+ FC +S  +  L Y   +      PN+  WN   RG+  S +P
Sbjct: 70  MIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDP 129

Query: 137 RYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGHVIQLGFDSDLFVHNA 196
             A+ LY  M+  G   P++YT+P + K CA         +I GHV++LG D DL+VH +
Sbjct: 130 VSALKLYVCMISLG-LLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTS 189

Query: 197 IIHVLVSCGELLAARKVFDES-------------------------------CVRDLVSW 256
           +I + V  G L  A KVFD+S                                V+D+VSW
Sbjct: 190 LISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSW 249

Query: 257 NSIINGYVRCGLADEALDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEE 316
           N++I+GY   G   EAL+L+  M + NV PDE TM+ VVSA AQ  ++ LGR++H +I++
Sbjct: 250 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD 309

Query: 317 MGLNLTVPLANALMDMYIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRL 376
            G    + + NAL+D+Y KC                               G LE+A  L
Sbjct: 310 HGFGSNLKIVNALIDLYSKC-------------------------------GELETACGL 369

Query: 377 FNEMPEKDVVPWNALIGGFVQAKRSKEALALFHEMQASNVAPDGVTVVNCLSACSQLGAL 436
           F  +P KDV+ WN LIGG+      KEAL LF EM  S   P+ VT+++ L AC+ LGA+
Sbjct: 370 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 429

Query: 437 DVGIWMHHYVDKH--DLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIIC 496
           D+G W+H Y+DK    +T   +L T+L+DMYAKCG+I+ A QVF  +  ++  +W A+I 
Sbjct: 430 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 489

Query: 497 GLALHGQAHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGIS 556
           G A+HG+A A+   FS M  IG+ PD+ITF+G+LSAC H G++D GR  F  M+  + ++
Sbjct: 490 GFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMT 549

Query: 557 PKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASK 616
           PKL+HY C++DLLG +G  +EAEE+I  M  EPD V+W +L    ++HGNV +GE  A  
Sbjct: 550 PKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAEN 609

Query: 617 LLELDPHDSGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFII 666
           L++++P + G YVLL+N+Y  A  W +  K R ++ ++G++K PGCSSIE++ +V+EFII
Sbjct: 610 LIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFII 646

[Close]

BLAST of Cmc02g0043221 vs. TAIR 10
Match: AT3G15930.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 482.6 bits (1241), Expect = 5.1e-136
Identity = 237/608 (38.98%), Postives = 378/608 (62.17%), Query Frame = 0


Query: 58  LSLLEACSSMAQMKQIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANP 117
           +S+L  C +  Q KQ+H+Q I+ G+  +     +L  F       ++ Y  K+      P
Sbjct: 38  ISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEP 97

Query: 118 NVFSWNMAIRGYIESENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCA--GFSLSCTAN 177
           +V  WN  I+G+ + +     V LY NML++G  TPD++T+P L       G +L+C   
Sbjct: 98  DVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEG-VTPDSHTFPFLLNGLKRDGGALAC-GK 157

Query: 178 EILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCG 237
           ++  HV++ G  S+L+V NA++ +   CG +  AR VFD  C  D+ SWN +I+GY R  
Sbjct: 158 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMK 217

Query: 238 LADEALDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLAN 297
             +E+++L  +M    V P  VT++ V+SA +++++  L +++H+++ E     ++ L N
Sbjct: 218 EYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLEN 277

Query: 298 ALMDMYIKCKNIEAAKILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVP 357
           AL++ Y  C  ++ A  +F +M  + V+SWT +V GY + G L+ A   F++MP +D + 
Sbjct: 278 ALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRIS 337

Query: 358 WNALIGGFVQAKRSKEALALFHEMQASNVAPDGVTVVNCLSACSQLGALDVGIWMHHYVD 417
           W  +I G+++A    E+L +F EMQ++ + PD  T+V+ L+AC+ LG+L++G W+  Y+D
Sbjct: 338 WTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYID 397

Query: 418 KHDLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAIS 477
           K+ +  +V +G AL+DMY KCG  +KA +VF +M  R+  TWTA++ GLA +GQ   AI 
Sbjct: 398 KNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIK 457

Query: 478 YFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLL 537
            F +M  + + PD+IT++GVLSAC H G+VDQ R +F +M S   I P L HY C+VD+L
Sbjct: 458 VFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDML 517

Query: 538 GRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYV 597
           GRAG ++EA E++R MP  P+++VWGAL   SR+H +  M E AA K+LEL+P +  +Y 
Sbjct: 518 GRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYA 577

Query: 598 LLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKIYE 657
           LL N+Y     W+  R+VR+ + +  ++KTPG S IE+NG  +EF+  DKSH QSE+IY 
Sbjct: 578 LLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYM 637

Query: 658 CLTWLTRQ 664
            L  L ++
Sbjct: 638 KLEELAQE 643

[Close]

BLAST of Cmc02g0043221 vs. TAIR 10
Match: AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )

HSP 1 Score: 453.4 bits (1165), Expect = 3.3e-127
Identity = 225/583 (38.59%), Postives = 339/583 (58.15%), Query Frame = 0


Query: 72  QIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANPNVFSWNMAIRGYIE 131
           QIH  ++  G   D F  + LV F A  E   LD   K+ +  +  NV SW   I GY  
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYA--ECGELDSARKVFDEMSERNVVSWTSMICGYAR 214

Query: 132 SENPRYAVLLYRNMLRKGSATPDNYTYPLLFKVCAGFSLSCTANEILGHVIQLGFDSDLF 191
            +  + AV L+  M+R    TP++ T   +   CA      T  ++   +   G + +  
Sbjct: 215 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 274

Query: 192 VHNAIIHVLVSCGELLAARKVFDESCVRDLVSWNSIINGYVRCGLADEALDLYYKMGELN 251
           + +A++ + + C  +  A+++FDE    +L   N++ + YVR GL  EAL ++  M +  
Sbjct: 275 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 334

Query: 252 VMPDEVTMIGVVSASAQLENLALGRKLHQFIEEMGLNLTVPLANALMDMYIKCKNIEAAK 311
           V PD ++M+  +S+ +QL N+  G+  H ++   G      + NAL+DMY+KC   + A 
Sbjct: 335 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 394

Query: 312 ILFENMPKKTVVSWTIMVVGYAKFGLLESAVRLFNEMPEKDVVPWNALIGGFVQAKRSKE 371
            +F+ M  KTVV+W  +V GY + G +++A   F  MPEK++V WN +I G VQ    +E
Sbjct: 395 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEE 454

Query: 372 ALALFHEMQA-SNVAPDGVTVVNCLSACSQLGALDVGIWMHHYVDKHDLTMNVALGTALV 431
           A+ +F  MQ+   V  DGVT+++  SAC  LGALD+  W+++Y++K+ + ++V LGT LV
Sbjct: 455 AIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLV 514

Query: 432 DMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQAHAAISYFSEMISIGLVPDEI 491
           DM+++CG+ + A+ +F  +  R+   WTA I  +A+ G A  AI  F +MI  GL PD +
Sbjct: 515 DMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGV 574

Query: 492 TFIGVLSACCHGGLVDQGRDYFYQMSSKFGISPKLKHYSCLVDLLGRAGFLEEAEELIRS 551
            F+G L+AC HGGLV QG++ FY M    G+SP+  HY C+VDLLGRAG LEEA +LI  
Sbjct: 575 AFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIED 634

Query: 552 MPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDSGIYVLLANMYGDANMWEQA 611
           MP EP+ V+W +L    R+ GNV M   AA K+  L P  +G YVLL+N+Y  A  W   
Sbjct: 635 MPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDM 694

Query: 612 RKVRKMMEERGVEKTPGCSSIEMNGLVYEFIIRDKSHPQSEKI 654
            KVR  M+E+G+ K PG SSI++ G  +EF   D+SHP+   I
Sbjct: 695 AKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNI 735

The following BLAST results are available for this feature:

BLAST of Cmc02g0043221 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0059090.1	0.0e+00	100.00	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18838...	[more]
XP_008450440.1	0.0e+00	99.85	PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial ...	[more]
XP_004139112.1	0.0e+00	95.45	pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucumis sa...	[more]
XP_038878576.1	0.0e+00	92.36	pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Benincasa ...	[more]
XP_023531862.1	0.0e+00	90.25	pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucurbita ...	[more]

BLAST of Cmc02g0043221 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJZ3	9.0e-239	61.73	Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop...	[more]
O82380	8.1e-155	42.28	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
Q9LN01	7.1e-143	39.53	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9LSB8	7.1e-135	38.98	Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th...	[more]
Q9LUJ2	4.6e-126	38.59	Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX...	[more]

BLAST of Cmc02g0043221 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UVG6	0.0e+00	100.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BP74	0.0e+00	99.85	pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Cucumis ...	[more]
A0A0A0M2R3	0.0e+00	95.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613480 PE=4 SV=1	[more]
A0A6J1HQQ6	0.0e+00	89.22	pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Cucurbit...	[more]
A0A6J1ELP9	0.0e+00	88.77	pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Cucurbit...	[more]

BLAST of Cmc02g0043221 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G22410.1	6.4e-240	61.73	SLOW GROWTH 1	[more]
AT2G29760.1	5.8e-156	42.28	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G08070.1	5.1e-144	39.53	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G15930.1	5.1e-136	38.98	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G22690.1	3.3e-127	38.59	CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 170..272 e-value: 2.5E-19 score: 71.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 472..589 e-value: 2.1E-25 score: 91.8 coord: 50..169 e-value: 6.3E-11 score: 44.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 273..418 e-value: 3.9E-28 score: 100.8
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 432..613
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 456..489 e-value: 4.0E-5 score: 21.5 coord: 491..523 e-value: 7.5E-4 score: 17.5 coord: 356..387 e-value: 1.2E-7 score: 29.5 coord: 222..256 e-value: 7.1E-7 score: 27.0 coord: 427..450 e-value: 4.0E-4 score: 18.4 coord: 323..355 e-value: 2.9E-6 score: 25.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 594..622 e-value: 0.17 score: 12.2 coord: 295..320 e-value: 0.12 score: 12.7 coord: 527..551 e-value: 0.0031 score: 17.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 220..259 e-value: 1.1E-8 score: 35.1 coord: 351..398 e-value: 2.9E-10 score: 40.2 coord: 453..501 e-value: 7.4E-8 score: 32.5 coord: 117..166 e-value: 1.9E-8 score: 34.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 422..452 score: 8.6266
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 220..254 score: 12.452094
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 590..624 score: 9.065053
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 352..386 score: 11.947875
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 118..152 score: 9.119859
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 453..487 score: 10.325603
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 321..351 score: 9.810421
None	No IPR available	PANTHER	PTHR47925:SF92	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 39..672
None	No IPR available	PANTHER	PTHR47925	OS01G0913400 PROTEIN-RELATED	coord: 39..672

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0043221.1	Cmc02g0043221.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900865	chloroplast RNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding