CmaCh19G005360 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh19G005360
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionpathogenesis-related protein 1-like
LocationCma_Chr19: 6167461 .. 6168773 (+)
RNA-Seq ExpressionCmaCh19G005360
SyntenyCmaCh19G005360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTTTTTAAGCTCTCCCTCTTCCTCTTCTATGTCTCGAGCTTTGCGATGCTTCCCTCGTCTCTCGCTCAAGATTCTCCTCGAGACTTTGTCAATGCCACAATGCAGCCTGTGCCCTTGTTGGTGTCGGGCCAGTCATGTGGGACGAAAGGGTAGCTAGATTTGCTCGACAATATGCCAACCAACGTAAATATAACTGTAAGTTGGTGCACTCAGGCGGACCATATGGAGAAAATCTTGCATGGAGCAGCTACAACTTATCAGGCATTGCTGCAATTTGGATGTGGGTCACCGAGAAGCAATATTACAATCCTCGCACCAATACTTGTGCGGCTGGCAAGGTGTGTGGCCATTACACTCAAGTAGTGTGGAGAAAGTCAGTGAGAATTGGATGTGCCAAAGTGAGATGCACAAACAATCGTGGTAGGTTCATCACTTGCAACTATAATCCACCGGGCAATGTTAGAGGTCAAAGGCCATTCTGAGAATGGTTATAACTCAAATAAAAATACTGGACCGCCAGTAAAAGTGACTAAATAAAAATAACTTTAGTTGTGATCGGTCTAGTGATCTATGTTCTTATGAATGTTTTATGTATGGTACATCTTCCTATTATGAATGAAATAATGAAAATGAGAAGGTTTTTATTATATGATCAATATAATAACTTCAAACAATATTAAAATATAAATGATATTGGATGAAAGTCCCACATCGGTTAATTTAGAGAATGGTCATGGGTTTATAATCAATGAATATTATCTCCATTGGTATGTTGGTATGAGGTTTTTTGGGCAAACCTAAAGCAAAGCCAATTGAGAGCTTATACTTAAAGTAAACAATATCATATCATTGTGGAGAATCGTGTTCATCTATATTGTTCTCTTTGCGTTTTCTAGGGCTTATCCTGATCTAGGGCGTTAGTAGATATTGTTGCATTTTCGATATTGTTCTCTTTGCGTTTTCTAGGGCTTATCCTGATTGTTAGCAGATATTGTTCTCTTTGCGTTTTCTAGGGCTTATCCTGATTGTTAGCAGATATTGTTCTCTTTGCGTTTTCTAGGGCTTATCCTGATTGTTAGCAGATATTGTTCTCTTTGCGTTTTCTAGGGCTTATCCTGATTGTTAGCAGATATTGTTCTCTTTGCGTTTTCTAGGGCTTATCCTGATTGTTAGCAGATATTGTTCTCTTTGCGTTTTCTAGGGCTTATCCTGATTGTTAGCAGATATTGTTCTCTTTGCGTTTTCTAGGGCTTATCCTGATTGATAGCAGATATTGTTCTCTTTGCGTTTTCTAGGGCTTATCCTGA

mRNA sequence

ATGGATCTTTTTAAGCTCTCCCTCTTCCTCTTCTATGTCTCGAGCTTTGCGATGCTTCCCTCGTCTCTCGCTCAAGATTCTCCTCGAGACTTTGTCAATGCCACAATGCAGCCTGTGCCCTTGTTGGTGTCGGGCCAGTCATGTGGGACGAAAGGATTTGCTCGACAATATGCCAACCAACGTAAATATAACTGTAAGTTGGTGCACTCAGGCGGACCATATGGAGAAAATCTTGCATGGAGCAGCTACAACTTATCAGGCATTGCTGCAATTTGGATGTGGGTCACCGAGAAGCAATATTACAATCCTCGCACCAATACTTGTGCGGCTGGCAAGGTGTGTGGCCATTACACTCAAGTAGTGTGGAGAAAGTCAGTGAGAATTGGATGTGCCAAAGTGAGATGCACAAACAATCGTGGTAGGTTCATCACTTGCAACTATAATCCACCGGGCAATGGCTTATCCTGA

Coding sequence (CDS)

ATGGATCTTTTTAAGCTCTCCCTCTTCCTCTTCTATGTCTCGAGCTTTGCGATGCTTCCCTCGTCTCTCGCTCAAGATTCTCCTCGAGACTTTGTCAATGCCACAATGCAGCCTGTGCCCTTGTTGGTGTCGGGCCAGTCATGTGGGACGAAAGGATTTGCTCGACAATATGCCAACCAACGTAAATATAACTGTAAGTTGGTGCACTCAGGCGGACCATATGGAGAAAATCTTGCATGGAGCAGCTACAACTTATCAGGCATTGCTGCAATTTGGATGTGGGTCACCGAGAAGCAATATTACAATCCTCGCACCAATACTTGTGCGGCTGGCAAGGTGTGTGGCCATTACACTCAAGTAGTGTGGAGAAAGTCAGTGAGAATTGGATGTGCCAAAGTGAGATGCACAAACAATCGTGGTAGGTTCATCACTTGCAACTATAATCCACCGGGCAATGGCTTATCCTGA

Protein sequence

MDLFKLSLFLFYVSSFAMLPSSLAQDSPRDFVNATMQPVPLLVSGQSCGTKGFARQYANQRKYNCKLVHSGGPYGENLAWSSYNLSGIAAIWMWVTEKQYYNPRTNTCAAGKVCGHYTQVVWRKSVRIGCAKVRCTNNRGRFITCNYNPPGNGLS
Homology
BLAST of CmaCh19G005360 vs. ExPASy Swiss-Prot
Match: P35792 (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 9.2e-38
Identity = 83/153 (54.25%), Postives = 99/153 (64.71%), Query Frame = 0

Query: 5   KLSLFLFYVSSFAMLPSSLAQDSPRDFV---NATMQPVPLLVSGQSCGTKGFARQYANQR 64
           KL++ L    + AM+  S AQ+SP+D+V   NA    V +     S   + FA+ YANQR
Sbjct: 5   KLAILLALAMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQR 64

Query: 65  KYNCKLVHSGGPYGENLAWSSYNLSGIA--AIWMWVTEKQYYNPRTNTCAAGKVCGHYTQ 124
             +CKL HSGGPYGEN+ W S      A  A+  WV EK+ YN  +NTCAAGKVCGHYTQ
Sbjct: 65  INDCKLQHSGGPYGENIFWGSAGADWKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHYTQ 124

Query: 125 VVWRKSVRIGCAKVRCTNNRGRFITCNYNPPGN 153
           VVWR S  IGCA+V C NNRG FITCNY P GN
Sbjct: 125 VVWRASTSIGCARVVCNNNRGVFITCNYEPRGN 157

BLAST of CmaCh19G005360 vs. ExPASy Swiss-Prot
Match: Q41359 (Pathogenesis-related protein PR-1 type OS=Sambucus nigra OX=4202 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.6e-37
Identity = 85/151 (56.29%), Postives = 102/151 (67.55%), Query Frame = 0

Query: 7   SLFLFYVSSFAMLPSSLAQDSPRDFV---NATMQPVPLLVSGQSCGTKGFARQYANQRKY 66
           S+ L  V +  M+  S+AQ+SP+D+V   NA    V +           FARQYA  R  
Sbjct: 11  SVALVCVVALVMVQYSVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAG 70

Query: 67  NCKLVHSGGP-YGENLAW-SSYNLSGIAAIWMWVTEKQYYNPRTNTCAAGKVCGHYTQVV 126
           +C+LVHSG P YGENLA+ S + L+G  A+ MWV E+  YNP TNTCA GKVCGHYTQVV
Sbjct: 71  DCRLVHSGDPRYGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVV 130

Query: 127 WRKSVRIGCAKVRCTNNRGRFITCNYNPPGN 153
           WR SVRIGCA+VRC NN   FITCNY+PPGN
Sbjct: 131 WRNSVRIGCARVRC-NNGAWFITCNYSPPGN 160

BLAST of CmaCh19G005360 vs. ExPASy Swiss-Prot
Match: Q05968 (Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.7e-37
Identity = 82/153 (53.59%), Postives = 100/153 (65.36%), Query Frame = 0

Query: 5   KLSLFLFYVSSFAMLPSSLAQDSPRDFV---NATMQPVPLLVSGQSCGTKGFARQYANQR 64
           KL++ L    + AM+  S AQ+SP+D+V   NA    V +     S   + FA+ YANQR
Sbjct: 5   KLAILLALAMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQR 64

Query: 65  KYNCKLVHSGGPYGENLAWSSYNLSGIA--AIWMWVTEKQYYNPRTNTCAAGKVCGHYTQ 124
             +CKL HSGGPYGEN+ W S      A  A+  WV+EK+ Y+  +NTCAAGKVCGHYTQ
Sbjct: 65  INDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQ 124

Query: 125 VVWRKSVRIGCAKVRCTNNRGRFITCNYNPPGN 153
           VVWR S  IGCA+V C NNRG FITCNY P GN
Sbjct: 125 VVWRASTSIGCARVVCNNNRGVFITCNYEPRGN 157

BLAST of CmaCh19G005360 vs. ExPASy Swiss-Prot
Match: P35793 (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.5e-37
Identity = 83/153 (54.25%), Postives = 99/153 (64.71%), Query Frame = 0

Query: 5   KLSLFLFYVSSFAMLPSSLAQDSPRDFV---NATMQPVPLLVSGQSCGTKGFARQYANQR 64
           KL + L    S AM+  S AQ+SP+D+V   NA    V +     S   + FA+ YANQR
Sbjct: 5   KLVILLALAMSAAMVNLSQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQR 64

Query: 65  KYNCKLVHSGGPYGENLAWSSYNLSGIA--AIWMWVTEKQYYNPRTNTCAAGKVCGHYTQ 124
             +CKL HSGGPYGEN+ W S      A  A+  WV+EK+ Y+  +NTCAAGKVCGHYTQ
Sbjct: 65  INDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQ 124

Query: 125 VVWRKSVRIGCAKVRCTNNRGRFITCNYNPPGN 153
           VVWR S  IGCA+V C NNRG FITCNY P GN
Sbjct: 125 VVWRASTSIGCARVVCNNNRGVFITCNYEPRGN 157

BLAST of CmaCh19G005360 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.9e-36
Identity = 79/148 (53.38%), Postives = 99/148 (66.89%), Query Frame = 0

Query: 8   LFLFYVSSFAMLPSSLAQDSPRDFVNATMQPVPLLVSGQSCGTK---GFARQYANQRKYN 67
           L +F     A++  S AQDSP+D++    Q    +  G     +    +AR YA Q + N
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 68  CKLVHSGGPYGENLAWSSYNLSGIAAIWMWVTEKQYYNPRTNTCAAGKVCGHYTQVVWRK 127
           C+L+HSGGPYGENLAW S +LSG++A+ MWV+EK  YN   NTC    VCGHYTQVVWRK
Sbjct: 70  CRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWRK 129

Query: 128 SVRIGCAKVRCTNNRGRFITCNYNPPGN 153
           SVR+GCAKVRC NN G  I+CNY+P GN
Sbjct: 130 SVRLGCAKVRC-NNGGTIISCNYDPRGN 154

BLAST of CmaCh19G005360 vs. ExPASy TrEMBL
Match: A0A6J1GMD3 (pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455281 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.9e-64
Identity = 122/155 (78.71%), Postives = 130/155 (83.87%), Query Frame = 0

Query: 1   MDLFKLSLFLFYVSSFAMLPSSLAQDSPRDFVNATMQPVPLLVSGQ---SCGTKGFARQY 60
           MDLFKLSLFL+YV SFAMLPSSLAQDSP+DFVNA      L+  G          FARQY
Sbjct: 1   MDLFKLSLFLYYVMSFAMLPSSLAQDSPQDFVNAHNAARALVGVGPVKWDERVTRFARQY 60

Query: 61  ANQRKYNCKLVHSGGPYGENLAWSSYNLSGIAAIWMWVTEKQYYNPRTNTCAAGKVCGHY 120
           ANQ K++CKLVH GGPYGENLAWS YNLSGIAA+WMWVTEKQYYNPR NTCA GKVCGHY
Sbjct: 61  ANQLKHSCKLVHLGGPYGENLAWSGYNLSGIAAVWMWVTEKQYYNPRINTCATGKVCGHY 120

Query: 121 TQVVWRKSVRIGCAKVRCTNNRGRFITCNYNPPGN 153
           TQVVWRKSVRIGCAKV+CTNNRG FITCNY+PPGN
Sbjct: 121 TQVVWRKSVRIGCAKVKCTNNRGTFITCNYDPPGN 155

BLAST of CmaCh19G005360 vs. ExPASy TrEMBL
Match: A0A6J1GKU7 (pathogenesis-related protein PRB1-2-like OS=Cucurbita moschata OX=3662 GN=LOC111455285 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.7e-58
Identity = 114/155 (73.55%), Postives = 125/155 (80.65%), Query Frame = 0

Query: 1   MDLFKLSLFLFYVSSFAMLPSSLAQDSPRDFVNATMQPVPLLVSGQ---SCGTKGFARQY 60
           MDLFKLSLFLFYVSSF MLPSSLAQDSP+DFVNA       +  G          FARQY
Sbjct: 1   MDLFKLSLFLFYVSSFTMLPSSLAQDSPQDFVNAHNAARAQVGVGPVKWDEKVASFARQY 60

Query: 61  ANQRKYNCKLVHSGGPYGENLAWSSYNLSGIAAIWMWVTEKQYYNPRTNTCAAGKVCGHY 120
           ANQR  +C+L+HS GPYGEN+AW S +LSGIAA+ MWV EKQ+YNPRTNTCA GKVCGHY
Sbjct: 61  ANQRINDCRLMHSSGPYGENIAWGSSDLSGIAAVRMWVDEKQFYNPRTNTCATGKVCGHY 120

Query: 121 TQVVWRKSVRIGCAKVRCTNNRGRFITCNYNPPGN 153
           TQVVWR SVRIGCAKV+CTNNRG FITCNY+PPGN
Sbjct: 121 TQVVWRSSVRIGCAKVKCTNNRGTFITCNYDPPGN 155

BLAST of CmaCh19G005360 vs. ExPASy TrEMBL
Match: A0A6J1I658 (pathogenesis-related protein PR-1 type-like OS=Cucurbita maxima OX=3661 GN=LOC111471050 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 7.2e-54
Identity = 112/156 (71.79%), Postives = 121/156 (77.56%), Query Frame = 0

Query: 1   MDLFKLSLFLFY-VSSFAMLPSSLAQDSPRDFVNATMQPVPLLVSGQ---SCGTKGFARQ 60
           MDLFKLSL LFY V SFAM  SSLAQDSP+DFVNA       +  G          FARQ
Sbjct: 1   MDLFKLSLSLFYVVLSFAMFHSSLAQDSPQDFVNAHNAARAQVGVGPIRWDERVASFARQ 60

Query: 61  YANQRKYNCKLVHSGGPYGENLAWSSYNLSGIAAIWMWVTEKQYYNPRTNTCAAGKVCGH 120
           YANQR  +C+LVHSGGPYGEN+AW S +LSG  A+ MWV EKQ+YNP TNTCAAGKVCGH
Sbjct: 61  YANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSTNTCAAGKVCGH 120

Query: 121 YTQVVWRKSVRIGCAKVRCTNNRGRFITCNYNPPGN 153
           YTQVVWR SVRIGCAKVRCTNNRG FITCNY+PPGN
Sbjct: 121 YTQVVWRNSVRIGCAKVRCTNNRGTFITCNYDPPGN 156

BLAST of CmaCh19G005360 vs. ExPASy TrEMBL
Match: A0A6J1GME9 (pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455303 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.3e-52
Identity = 108/155 (69.68%), Postives = 122/155 (78.71%), Query Frame = 0

Query: 1   MDLFKLSLFLFYVSSFAMLPSSLAQDSPRDFV---NATMQPVPLLVSGQSCGTKGFARQY 60
           MD+FKLSL LFYV SFAMLPSSLAQDSP+DFV   NA    V +           FARQ+
Sbjct: 1   MDVFKLSL-LFYVLSFAMLPSSLAQDSPQDFVNGHNAARAQVGVGPVRWDESVANFARQF 60

Query: 61  ANQRKYNCKLVHSGGPYGENLAWSSYNLSGIAAIWMWVTEKQYYNPRTNTCAAGKVCGHY 120
           ANQR  +C+L+HSGGP+GEN+A  S ++SG  A+ MWV EK +YNPRTNTCAAGKVCGHY
Sbjct: 61  ANQRINDCQLMHSGGPFGENIAKHSSDMSGTDAVQMWVDEKPFYNPRTNTCAAGKVCGHY 120

Query: 121 TQVVWRKSVRIGCAKVRCTNNRGRFITCNYNPPGN 153
           TQVVWR SVRIGCAKVRCTNNRG FITCNY+PPGN
Sbjct: 121 TQVVWRNSVRIGCAKVRCTNNRGTFITCNYDPPGN 154

BLAST of CmaCh19G005360 vs. ExPASy TrEMBL
Match: A0A6J1GLT8 (pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455432 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 5.7e-51
Identity = 107/156 (68.59%), Postives = 118/156 (75.64%), Query Frame = 0

Query: 1   MDLFKLSLFLFY-VSSFAMLPSSLAQDSPRDFVNATMQPVPLLVSGQ---SCGTKGFARQ 60
           MDLFKLSL +FY V SFAM  SSLAQDSP+DFVNA       +  G          FARQ
Sbjct: 1   MDLFKLSLSIFYVVLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFARQ 60

Query: 61  YANQRKYNCKLVHSGGPYGENLAWSSYNLSGIAAIWMWVTEKQYYNPRTNTCAAGKVCGH 120
           YANQR  +C+LVHSGGPYGEN+AW S +LSG  A+ MWV EKQ+YNP  NTCAAG+VCGH
Sbjct: 61  YANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSANTCAAGRVCGH 120

Query: 121 YTQVVWRKSVRIGCAKVRCTNNRGRFITCNYNPPGN 153
           YTQVVWR SVRIGCAKVRCTNNRG FI CNY+P GN
Sbjct: 121 YTQVVWRNSVRIGCAKVRCTNNRGTFIICNYDPRGN 156

BLAST of CmaCh19G005360 vs. NCBI nr
Match: XP_023511432.1 (pathogenesis-related protein PR-1 type-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.2 bits (666), Expect = 5.9e-66
Identity = 126/155 (81.29%), Postives = 135/155 (87.10%), Query Frame = 0

Query: 1   MDLFKLSLFLFYVSSFAMLPSSLAQDSPRDFVNATMQPVPLLVSGQSCGTK---GFARQY 60
           MDLFKLSLFLFYVSSFAML  SLAQDSP+D+VNA      L+  G     +    FARQY
Sbjct: 1   MDLFKLSLFLFYVSSFAMLSLSLAQDSPQDYVNAHNAARALVGIGPVKWDERIARFARQY 60

Query: 61  ANQRKYNCKLVHSGGPYGENLAWSSYNLSGIAAIWMWVTEKQYYNPRTNTCAAGKVCGHY 120
           ANQRK+NCKLVHSGGPYGENLAWSSYNLSGIAA+WMWVTE+QYYNPRTNTCAAGKVCGHY
Sbjct: 61  ANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGKVCGHY 120

Query: 121 TQVVWRKSVRIGCAKVRCTNNRGRFITCNYNPPGN 153
           TQVVWRKSVRIGCAKV+CTNNRG FITCNY+PPGN
Sbjct: 121 TQVVWRKSVRIGCAKVKCTNNRGTFITCNYDPPGN 155

BLAST of CmaCh19G005360 vs. NCBI nr
Match: XP_023511454.1 (pathogenesis-related protein PR-1 type-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.4 bits (664), Expect = 1.0e-65
Identity = 125/155 (80.65%), Postives = 135/155 (87.10%), Query Frame = 0

Query: 1   MDLFKLSLFLFYVSSFAMLPSSLAQDSPRDFVNATMQPVPLLVSGQSCGTK---GFARQY 60
           MDLFKLSLFLFYVSSFAMLP  LAQDSP+D+VNA      L+  G     +    FARQY
Sbjct: 1   MDLFKLSLFLFYVSSFAMLPLFLAQDSPQDYVNAHNAARALVGIGPVKWDERIARFARQY 60

Query: 61  ANQRKYNCKLVHSGGPYGENLAWSSYNLSGIAAIWMWVTEKQYYNPRTNTCAAGKVCGHY 120
           ANQRK+NCKLVHSGGPYGENLAWSSYNLSGIAA+WMWVT++QYYNPRTNTCAAGKVCGHY
Sbjct: 61  ANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTKRQYYNPRTNTCAAGKVCGHY 120

Query: 121 TQVVWRKSVRIGCAKVRCTNNRGRFITCNYNPPGN 153
           TQVVWRKSVRIGCAKV+CTNNRG FITCNY+PPGN
Sbjct: 121 TQVVWRKSVRIGCAKVKCTNNRGTFITCNYDPPGN 155

BLAST of CmaCh19G005360 vs. NCBI nr
Match: XP_022952650.1 (pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 253.4 bits (646), Expect = 1.2e-63
Identity = 122/155 (78.71%), Postives = 130/155 (83.87%), Query Frame = 0

Query: 1   MDLFKLSLFLFYVSSFAMLPSSLAQDSPRDFVNATMQPVPLLVSGQ---SCGTKGFARQY 60
           MDLFKLSLFL+YV SFAMLPSSLAQDSP+DFVNA      L+  G          FARQY
Sbjct: 1   MDLFKLSLFLYYVMSFAMLPSSLAQDSPQDFVNAHNAARALVGVGPVKWDERVTRFARQY 60

Query: 61  ANQRKYNCKLVHSGGPYGENLAWSSYNLSGIAAIWMWVTEKQYYNPRTNTCAAGKVCGHY 120
           ANQ K++CKLVH GGPYGENLAWS YNLSGIAA+WMWVTEKQYYNPR NTCA GKVCGHY
Sbjct: 61  ANQLKHSCKLVHLGGPYGENLAWSGYNLSGIAAVWMWVTEKQYYNPRINTCATGKVCGHY 120

Query: 121 TQVVWRKSVRIGCAKVRCTNNRGRFITCNYNPPGN 153
           TQVVWRKSVRIGCAKV+CTNNRG FITCNY+PPGN
Sbjct: 121 TQVVWRKSVRIGCAKVKCTNNRGTFITCNYDPPGN 155

BLAST of CmaCh19G005360 vs. NCBI nr
Match: KAG6571907.1 (hypothetical protein SDJN03_28635, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 240.4 bits (612), Expect = 1.1e-59
Identity = 113/138 (81.88%), Postives = 121/138 (87.68%), Query Frame = 0

Query: 18  MLPSSLAQDSPRDFVNATMQPVPLLVSGQSCGTK---GFARQYANQRKYNCKLVHSGGPY 77
           MLPSSLAQDSP+DFVNA      L+  GQ    +    FARQYANQRK+NCKLVHSGGPY
Sbjct: 1   MLPSSLAQDSPQDFVNAHNAARALVGVGQVKWDERIARFARQYANQRKHNCKLVHSGGPY 60

Query: 78  GENLAWSSYNLSGIAAIWMWVTEKQYYNPRTNTCAAGKVCGHYTQVVWRKSVRIGCAKVR 137
           GENLAWSSYNLSGIAA+WMWVTE+QYYNPRTNTCAAGKVCGHYTQVVWRKSVRIGCAKV+
Sbjct: 61  GENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGKVCGHYTQVVWRKSVRIGCAKVK 120

Query: 138 CTNNRGRFITCNYNPPGN 153
           CTNNRG FITCNY+PPGN
Sbjct: 121 CTNNRGTFITCNYDPPGN 138

BLAST of CmaCh19G005360 vs. NCBI nr
Match: XP_022952656.1 (pathogenesis-related protein PRB1-2-like [Cucurbita moschata])

HSP 1 Score: 234.2 bits (596), Expect = 7.7e-58
Identity = 114/155 (73.55%), Postives = 125/155 (80.65%), Query Frame = 0

Query: 1   MDLFKLSLFLFYVSSFAMLPSSLAQDSPRDFVNATMQPVPLLVSGQ---SCGTKGFARQY 60
           MDLFKLSLFLFYVSSF MLPSSLAQDSP+DFVNA       +  G          FARQY
Sbjct: 1   MDLFKLSLFLFYVSSFTMLPSSLAQDSPQDFVNAHNAARAQVGVGPVKWDEKVASFARQY 60

Query: 61  ANQRKYNCKLVHSGGPYGENLAWSSYNLSGIAAIWMWVTEKQYYNPRTNTCAAGKVCGHY 120
           ANQR  +C+L+HS GPYGEN+AW S +LSGIAA+ MWV EKQ+YNPRTNTCA GKVCGHY
Sbjct: 61  ANQRINDCRLMHSSGPYGENIAWGSSDLSGIAAVRMWVDEKQFYNPRTNTCATGKVCGHY 120

Query: 121 TQVVWRKSVRIGCAKVRCTNNRGRFITCNYNPPGN 153
           TQVVWR SVRIGCAKV+CTNNRG FITCNY+PPGN
Sbjct: 121 TQVVWRSSVRIGCAKVKCTNNRGTFITCNYDPPGN 155

BLAST of CmaCh19G005360 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 152.9 bits (385), Expect = 2.1e-37
Identity = 79/148 (53.38%), Postives = 99/148 (66.89%), Query Frame = 0

Query: 8   LFLFYVSSFAMLPSSLAQDSPRDFVNATMQPVPLLVSGQSCGTK---GFARQYANQRKYN 67
           L +F     A++  S AQDSP+D++    Q    +  G     +    +AR YA Q + N
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 68  CKLVHSGGPYGENLAWSSYNLSGIAAIWMWVTEKQYYNPRTNTCAAGKVCGHYTQVVWRK 127
           C+L+HSGGPYGENLAW S +LSG++A+ MWV+EK  YN   NTC    VCGHYTQVVWRK
Sbjct: 70  CRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWRK 129

Query: 128 SVRIGCAKVRCTNNRGRFITCNYNPPGN 153
           SVR+GCAKVRC NN G  I+CNY+P GN
Sbjct: 130 SVRLGCAKVRC-NNGGTIISCNYDPRGN 154

BLAST of CmaCh19G005360 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 152.5 bits (384), Expect = 2.7e-37
Identity = 79/132 (59.85%), Postives = 92/132 (69.70%), Query Frame = 0

Query: 24  AQDSPRDFVNATMQPVPLLVSGQ---SCGTKGFARQYANQRKYNCKLVHSGGPYGENLAW 83
           AQDS +D+VNA  Q    +  G      G   +AR YANQ K +C+LVHS GPYGENLA 
Sbjct: 26  AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAK 85

Query: 84  SSYNLSGIAAIWMWVTEKQYYNPRTNTCAAGKVCGHYTQVVWRKSVRIGCAKVRCTNNRG 143
           S  +LSG+AA+ +WV EK  YN  TNTC    VCGHYTQVVWR SVR+GCAKVRC NN G
Sbjct: 86  SGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKVRC-NNGG 145

Query: 144 RFITCNYNPPGN 153
             I+CNY+PPGN
Sbjct: 146 TIISCNYDPPGN 154

BLAST of CmaCh19G005360 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 146.7 bits (369), Expect = 1.5e-35
Identity = 79/157 (50.32%), Postives = 100/157 (63.69%), Query Frame = 0

Query: 1   MDLFKLSLFLFYVSSF--AMLPSSLAQDSPRDFV---NATMQPVPLLVSGQSCGTKGFAR 60
           M +F  S  LF   +F   ++    AQDSP+DF+   N     V +           +AR
Sbjct: 1   MKIFNSSQNLFLAITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYAR 60

Query: 61  QYANQRKYNCKLVHSGGPYGENLAWSSYNLSGIAAIWMWVTEKQYYNPRTNTCAAGKVCG 120
            YANQRK +C + HS G YGEN+AWSS +++G+AA+ MWV E+  Y+  +NTCA  K CG
Sbjct: 61  NYANQRKGDCAMKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCG 120

Query: 121 HYTQVVWRKSVRIGCAKVRCTNNRGRFITCNYNPPGN 153
           HYTQVVWR S R+GCAKVRC NN   FITCNY+PPGN
Sbjct: 121 HYTQVVWRNSERLGCAKVRC-NNGQTFITCNYDPPGN 156

BLAST of CmaCh19G005360 vs. TAIR 10
Match: AT5G26130.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 135.2 bits (339), Expect = 4.5e-32
Identity = 69/134 (51.49%), Postives = 84/134 (62.69%), Query Frame = 0

Query: 24  AQDSPRDFV---NATMQPVPLLVSGQSCGTKGFARQYANQRKYNCKLVH--SGGPYGENL 83
           AQD P+D++   N     V +       G + +A  YA QRK +C L H  S G YGENL
Sbjct: 27  AQDQPQDYLDEHNRARTQVGVPPMKWHAGAEQYAWNYAQQRKGDCSLTHSNSNGLYGENL 86

Query: 84  AWSSYNLSGIAAIWMWVTEKQYYNPRTNTCAAGKVCGHYTQVVWRKSVRIGCAKVRCTNN 143
           AWS   LSG  A+ +WV EK  Y   +NTC+ GK CGHYTQVVWR S  +GCAKV+C +N
Sbjct: 87  AWSGGALSGAEAVKLWVNEKSDYIYASNTCSDGKQCGHYTQVVWRTSEWVGCAKVKC-DN 146

Query: 144 RGRFITCNYNPPGN 153
            G F+TCNY PPGN
Sbjct: 147 GGTFVTCNYYPPGN 159

BLAST of CmaCh19G005360 vs. TAIR 10
Match: AT4G33710.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 134.8 bits (338), Expect = 5.9e-32
Identity = 67/134 (50.00%), Postives = 88/134 (65.67%), Query Frame = 0

Query: 24  AQDSPRDFV---NATMQPVPLLVSGQSCGTKGFARQYANQRKYNCKLVHSG--GPYGENL 83
           AQD  +D++   N     V +       G   +A  YA +RK +C+L+HS   G YGENL
Sbjct: 27  AQDRRQDYLDVHNHARDDVSVPHIKWHAGAARYAWNYAQRRKRDCRLIHSNSRGRYGENL 86

Query: 84  AWSSYNLSGIAAIWMWVTEKQYYNPRTNTCAAGKVCGHYTQVVWRKSVRIGCAKVRCTNN 143
           AWSS ++SG AA+ +WV EK  Y  ++NTC AGK CGHYTQVVW+ S  +GCAKV+C +N
Sbjct: 87  AWSSGDMSGAAAVRLWVREKSDYFHKSNTCRAGKQCGHYTQVVWKNSEWVGCAKVKC-DN 146

Query: 144 RGRFITCNYNPPGN 153
            G F+TCNY+ PGN
Sbjct: 147 GGTFVTCNYSHPGN 159

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P357929.2e-3854.25Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
Q413591.6e-3756.29Pathogenesis-related protein PR-1 type OS=Sambucus nigra OX=4202 PE=2 SV=1[more]
Q059682.7e-3753.59Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
P357933.5e-3754.25Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
P331542.9e-3653.38Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1... [more]
Match NameE-valueIdentityDescription
A0A6J1GMD35.9e-6478.71pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145528... [more]
A0A6J1GKU73.7e-5873.55pathogenesis-related protein PRB1-2-like OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1I6587.2e-5471.79pathogenesis-related protein PR-1 type-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1GME92.3e-5269.68pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145530... [more]
A0A6J1GLT85.7e-5168.59pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145543... [more]
Match NameE-valueIdentityDescription
XP_023511432.15.9e-6681.29pathogenesis-related protein PR-1 type-like [Cucurbita pepo subsp. pepo][more]
XP_023511454.11.0e-6580.65pathogenesis-related protein PR-1 type-like [Cucurbita pepo subsp. pepo][more]
XP_022952650.11.2e-6378.71pathogenesis-related protein 1-like [Cucurbita moschata][more]
KAG6571907.11.1e-5981.88hypothetical protein SDJN03_28635, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022952656.17.7e-5873.55pathogenesis-related protein PRB1-2-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT2G14610.12.1e-3753.38pathogenesis-related gene 1 [more]
AT2G14580.12.7e-3759.85basic pathogenesis-related protein 1 [more]
AT4G33720.11.5e-3550.32CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT5G26130.14.5e-3251.49CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT4G33710.15.9e-3250.00CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein-relatedPRINTSPR00837V5TPXLIKEcoord: 90..103
score: 37.67
coord: 142..155
score: 47.52
coord: 114..130
score: 66.25
IPR001283Cysteine-rich secretory protein-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 50..152
IPR014044CAP domainSMARTSM00198SCP_3coord: 26..155
e-value: 3.5E-36
score: 136.2
IPR014044CAP domainPFAMPF00188CAPcoord: 46..147
e-value: 2.6E-13
score: 50.9
IPR035940CAP superfamilyGENE3D3.40.33.10CAPcoord: 39..155
e-value: 2.9E-30
score: 107.4
IPR035940CAP superfamilySUPERFAMILY55797PR-1-likecoord: 52..152
NoneNo IPR availablePANTHERPTHR10334:SF488PATHOGENESIS-RELATED PROTEIN 1coord: 50..152
NoneNo IPR availableCDDcd05381CAP_PR-1coord: 53..153
e-value: 2.49046E-63
score: 188.612
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 115..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh19G005360.1CmaCh19G005360.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005615 extracellular space
cellular_component GO:0005576 extracellular region