CmaCh19G005360 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCTTTTTAAGCTCTCCCTCTTCCTCTTCTATGTCTCGAGCTTTGCGATGCTTCCCTCGTCTCTCGCTCAAGATTCTCCTCGAGACTTTGTCAATGCCACAATGCAGCCTGTGCCCTTGTTGGTGTCGGGCCAGTCATGTGGGACGAAAGGGTAGCTAGATTTGCTCGACAATATGCCAACCAACGTAAATATAACTGTAAGTTGGTGCACTCAGGCGGACCATATGGAGAAAATCTTGCATGGAGCAGCTACAACTTATCAGGCATTGCTGCAATTTGGATGTGGGTCACCGAGAAGCAATATTACAATCCTCGCACCAATACTTGTGCGGCTGGCAAGGTGTGTGGCCATTACACTCAAGTAGTGTGGAGAAAGTCAGTGAGAATTGGATGTGCCAAAGTGAGATGCACAAACAATCGTGGTAGGTTCATCACTTGCAACTATAATCCACCGGGCAATGTTAGAGGTCAAAGGCCATTCTGAGAATGGTTATAACTCAAATAAAAATACTGGACCGCCAGTAAAAGTGACTAAATAAAAATAACTTTAGTTGTGATCGGTCTAGTGATCTATGTTCTTATGAATGTTTTATGTATGGTACATCTTCCTATTATGAATGAAATAATGAAAATGAGAAGGTTTTTATTATATGATCAATATAATAACTTCAAACAATATTAAAATATAAATGATATTGGATGAAAGTCCCACATCGGTTAATTTAGAGAATGGTCATGGGTTTATAATCAATGAATATTATCTCCATTGGTATGTTGGTATGAGGTTTTTTGGGCAAACCTAAAGCAAAGCCAATTGAGAGCTTATACTTAAAGTAAACAATATCATATCATTGTGGAGAATCGTGTTCATCTATATTGTTCTCTTTGCGTTTTCTAGGGCTTATCCTGATCTAGGGCGTTAGTAGATATTGTTGCATTTTCGATATTGTTCTCTTTGCGTTTTCTAGGGCTTATCCTGATTGTTAGCAGATATTGTTCTCTTTGCGTTTTCTAGGGCTTATCCTGATTGTTAGCAGATATTGTTCTCTTTGCGTTTTCTAGGGCTTATCCTGATTGTTAGCAGATATTGTTCTCTTTGCGTTTTCTAGGGCTTATCCTGATTGTTAGCAGATATTGTTCTCTTTGCGTTTTCTAGGGCTTATCCTGATTGTTAGCAGATATTGTTCTCTTTGCGTTTTCTAGGGCTTATCCTGATTGTTAGCAGATATTGTTCTCTTTGCGTTTTCTAGGGCTTATCCTGATTGATAGCAGATATTGTTCTCTTTGCGTTTTCTAGGGCTTATCCTGA ATGGATCTTTTTAAGCTCTCCCTCTTCCTCTTCTATGTCTCGAGCTTTGCGATGCTTCCCTCGTCTCTCGCTCAAGATTCTCCTCGAGACTTTGTCAATGCCACAATGCAGCCTGTGCCCTTGTTGGTGTCGGGCCAGTCATGTGGGACGAAAGGATTTGCTCGACAATATGCCAACCAACGTAAATATAACTGTAAGTTGGTGCACTCAGGCGGACCATATGGAGAAAATCTTGCATGGAGCAGCTACAACTTATCAGGCATTGCTGCAATTTGGATGTGGGTCACCGAGAAGCAATATTACAATCCTCGCACCAATACTTGTGCGGCTGGCAAGGTGTGTGGCCATTACACTCAAGTAGTGTGGAGAAAGTCAGTGAGAATTGGATGTGCCAAAGTGAGATGCACAAACAATCGTGGTAGGTTCATCACTTGCAACTATAATCCACCGGGCAATGGCTTATCCTGA ATGGATCTTTTTAAGCTCTCCCTCTTCCTCTTCTATGTCTCGAGCTTTGCGATGCTTCCCTCGTCTCTCGCTCAAGATTCTCCTCGAGACTTTGTCAATGCCACAATGCAGCCTGTGCCCTTGTTGGTGTCGGGCCAGTCATGTGGGACGAAAGGATTTGCTCGACAATATGCCAACCAACGTAAATATAACTGTAAGTTGGTGCACTCAGGCGGACCATATGGAGAAAATCTTGCATGGAGCAGCTACAACTTATCAGGCATTGCTGCAATTTGGATGTGGGTCACCGAGAAGCAATATTACAATCCTCGCACCAATACTTGTGCGGCTGGCAAGGTGTGTGGCCATTACACTCAAGTAGTGTGGAGAAAGTCAGTGAGAATTGGATGTGCCAAAGTGAGATGCACAAACAATCGTGGTAGGTTCATCACTTGCAACTATAATCCACCGGGCAATGGCTTATCCTGA MDLFKLSLFLFYVSSFAMLPSSLAQDSPRDFVNATMQPVPLLVSGQSCGTKGFARQYANQRKYNCKLVHSGGPYGENLAWSSYNLSGIAAIWMWVTEKQYYNPRTNTCAAGKVCGHYTQVVWRKSVRIGCAKVRCTNNRGRFITCNYNPPGNGLS Homology
BLAST of CmaCh19G005360 vs. ExPASy Swiss-Prot
Match: P35792 (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 9.2e-38 Identity = 83/153 (54.25%), Postives = 99/153 (64.71%), Query Frame = 0
BLAST of CmaCh19G005360 vs. ExPASy Swiss-Prot
Match: Q41359 (Pathogenesis-related protein PR-1 type OS=Sambucus nigra OX=4202 PE=2 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 1.6e-37 Identity = 85/151 (56.29%), Postives = 102/151 (67.55%), Query Frame = 0
BLAST of CmaCh19G005360 vs. ExPASy Swiss-Prot
Match: Q05968 (Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 2.7e-37 Identity = 82/153 (53.59%), Postives = 100/153 (65.36%), Query Frame = 0
BLAST of CmaCh19G005360 vs. ExPASy Swiss-Prot
Match: P35793 (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 3.5e-37 Identity = 83/153 (54.25%), Postives = 99/153 (64.71%), Query Frame = 0
BLAST of CmaCh19G005360 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 2.9e-36 Identity = 79/148 (53.38%), Postives = 99/148 (66.89%), Query Frame = 0
BLAST of CmaCh19G005360 vs. ExPASy TrEMBL
Match: A0A6J1GMD3 (pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455281 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 5.9e-64 Identity = 122/155 (78.71%), Postives = 130/155 (83.87%), Query Frame = 0
BLAST of CmaCh19G005360 vs. ExPASy TrEMBL
Match: A0A6J1GKU7 (pathogenesis-related protein PRB1-2-like OS=Cucurbita moschata OX=3662 GN=LOC111455285 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 3.7e-58 Identity = 114/155 (73.55%), Postives = 125/155 (80.65%), Query Frame = 0
BLAST of CmaCh19G005360 vs. ExPASy TrEMBL
Match: A0A6J1I658 (pathogenesis-related protein PR-1 type-like OS=Cucurbita maxima OX=3661 GN=LOC111471050 PE=4 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 7.2e-54 Identity = 112/156 (71.79%), Postives = 121/156 (77.56%), Query Frame = 0
BLAST of CmaCh19G005360 vs. ExPASy TrEMBL
Match: A0A6J1GME9 (pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455303 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 2.3e-52 Identity = 108/155 (69.68%), Postives = 122/155 (78.71%), Query Frame = 0
BLAST of CmaCh19G005360 vs. ExPASy TrEMBL
Match: A0A6J1GLT8 (pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455432 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 5.7e-51 Identity = 107/156 (68.59%), Postives = 118/156 (75.64%), Query Frame = 0
BLAST of CmaCh19G005360 vs. NCBI nr
Match: XP_023511432.1 (pathogenesis-related protein PR-1 type-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 261.2 bits (666), Expect = 5.9e-66 Identity = 126/155 (81.29%), Postives = 135/155 (87.10%), Query Frame = 0
BLAST of CmaCh19G005360 vs. NCBI nr
Match: XP_023511454.1 (pathogenesis-related protein PR-1 type-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 260.4 bits (664), Expect = 1.0e-65 Identity = 125/155 (80.65%), Postives = 135/155 (87.10%), Query Frame = 0
BLAST of CmaCh19G005360 vs. NCBI nr
Match: XP_022952650.1 (pathogenesis-related protein 1-like [Cucurbita moschata]) HSP 1 Score: 253.4 bits (646), Expect = 1.2e-63 Identity = 122/155 (78.71%), Postives = 130/155 (83.87%), Query Frame = 0
BLAST of CmaCh19G005360 vs. NCBI nr
Match: KAG6571907.1 (hypothetical protein SDJN03_28635, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 240.4 bits (612), Expect = 1.1e-59 Identity = 113/138 (81.88%), Postives = 121/138 (87.68%), Query Frame = 0
BLAST of CmaCh19G005360 vs. NCBI nr
Match: XP_022952656.1 (pathogenesis-related protein PRB1-2-like [Cucurbita moschata]) HSP 1 Score: 234.2 bits (596), Expect = 7.7e-58 Identity = 114/155 (73.55%), Postives = 125/155 (80.65%), Query Frame = 0
BLAST of CmaCh19G005360 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 ) HSP 1 Score: 152.9 bits (385), Expect = 2.1e-37 Identity = 79/148 (53.38%), Postives = 99/148 (66.89%), Query Frame = 0
BLAST of CmaCh19G005360 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 ) HSP 1 Score: 152.5 bits (384), Expect = 2.7e-37 Identity = 79/132 (59.85%), Postives = 92/132 (69.70%), Query Frame = 0
BLAST of CmaCh19G005360 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein ) HSP 1 Score: 146.7 bits (369), Expect = 1.5e-35 Identity = 79/157 (50.32%), Postives = 100/157 (63.69%), Query Frame = 0
BLAST of CmaCh19G005360 vs. TAIR 10
Match: AT5G26130.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein ) HSP 1 Score: 135.2 bits (339), Expect = 4.5e-32 Identity = 69/134 (51.49%), Postives = 84/134 (62.69%), Query Frame = 0
BLAST of CmaCh19G005360 vs. TAIR 10
Match: AT4G33710.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein ) HSP 1 Score: 134.8 bits (338), Expect = 5.9e-32 Identity = 67/134 (50.00%), Postives = 88/134 (65.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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