CmaCh19G004410 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G004410
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Allyl alcohol dehydrogenase-like protein
Location	Cma_Chr19: 5370009 .. 5370305 (+)
RNA-Seq Expression	CmaCh19G004410
Synteny	CmaCh19G004410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCTTCTCTCATGGTGGAAAGGTGGTTCTGCGCCATCGGAATCCAATTCGAAGTCGCAGCCTCCTCCGAAGAATGTCTCTCAGCCGGCCGAAGTCCCTGGCCTTAACGGTGCCGTCGAAGTCCCCCGACCGGCCGCCACTGTGACCGTCTTCGAGTTCGGCTCCGTTTCCGCTTCCTCCGATAGTGTCACCCTAACCGGTTACTGCCCCGTCTCCGACGACCTCGAGCCCTGCCGCTGGGAGATTCTGCCTGCAAGCGGCTCCGACGCGCCTCTTTTTCGCGTCGTCTTCTGA

mRNA sequence

ATGGGTCTTCTCTCATGGTGGAAAGGTGGTTCTGCGCCATCGGAATCCAATTCGAAGTCGCAGCCTCCTCCGAAGAATGTCTCTCAGCCGGCCGAAGTCCCTGGCCTTAACGGTGCCGTCGAAGTCCCCCGACCGGCCGCCACTGTGACCGTCTTCGAGTTCGGCTCCGTTTCCGCTTCCTCCGATAGTGTCACCCTAACCGGTTACTGCCCCGTCTCCGACGACCTCGAGCCCTGCCGCTGGGAGATTCTGCCTGCAAGCGGCTCCGACGCGCCTCTTTTTCGCGTCGTCTTCTGA

Coding sequence (CDS)

ATGGGTCTTCTCTCATGGTGGAAAGGTGGTTCTGCGCCATCGGAATCCAATTCGAAGTCGCAGCCTCCTCCGAAGAATGTCTCTCAGCCGGCCGAAGTCCCTGGCCTTAACGGTGCCGTCGAAGTCCCCCGACCGGCCGCCACTGTGACCGTCTTCGAGTTCGGCTCCGTTTCCGCTTCCTCCGATAGTGTCACCCTAACCGGTTACTGCCCCGTCTCCGACGACCTCGAGCCCTGCCGCTGGGAGATTCTGCCTGCAAGCGGCTCCGACGCGCCTCTTTTTCGCGTCGTCTTCTGA

Protein sequence

MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSASSDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF

Homology

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BLAST of CmaCh19G004410 vs. ExPASy TrEMBL
Match: A0A6J1I4S4 (uncharacterized protein LOC111470658 OS=Cucurbita maxima OX=3661 GN=LOC111470658 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.2e-48
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60
          MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS
Sbjct: 1  MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60

Query: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
          SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF
Sbjct: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]

BLAST of CmaCh19G004410 vs. ExPASy TrEMBL
Match: A0A6J1GLN4 (uncharacterized protein LOC111455443 OS=Cucurbita moschata OX=3662 GN=LOC111455443 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 8.4e-48
Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 1  MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60
          MGLLSWWKGGSAPSESNSK QPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS
Sbjct: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60

Query: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
          SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF
Sbjct: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]

BLAST of CmaCh19G004410 vs. ExPASy TrEMBL
Match: A0A6J1DWE4 (uncharacterized protein LOC111024112 OS=Momordica charantia OX=3673 GN=LOC111024112 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.8e-40
Identity = 86/98 (87.76%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1  MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60
          MGLLSWWKG +APSESNSK QPP  NVSQPAEVPGLNGAVEVPRP  +VTVFEFGSVS+S
Sbjct: 1  MGLLSWWKGEAAPSESNSKPQPPLXNVSQPAEVPGLNGAVEVPRP-GSVTVFEFGSVSSS 60

Query: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
          SD VTL GYCPVSDDLEPCRWEILPA+GSDAPLFRVVF
Sbjct: 61 SDKVTLAGYCPVSDDLEPCRWEILPATGSDAPLFRVVF 97

[Close]

BLAST of CmaCh19G004410 vs. ExPASy TrEMBL
Match: A0A5D3E692 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004090 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.4e-39
Identity = 83/99 (83.84%), Postives = 90/99 (90.91%), Query Frame = 0


Query: 1  MGLLSWWKGGSAPSESNSK-SQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSA 60
          MGLLSWWKG S PS+S SK  QPP KN+SQPAEVPGLNGA+EVPRPAA+VTVFEFGSV+A
Sbjct: 1  MGLLSWWKGQSPPSDSTSKPPQPPSKNLSQPAEVPGLNGALEVPRPAASVTVFEFGSVTA 60

Query: 61 SSDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
          SSD VTL GYCPVSDD EPCRWEI+PASGSDAPLFR+VF
Sbjct: 61 SSDKVTLAGYCPVSDDFEPCRWEIMPASGSDAPLFRIVF 99

[Close]

BLAST of CmaCh19G004410 vs. ExPASy TrEMBL
Match: A0A1S3CQC7 (uncharacterized protein LOC103503504 OS=Cucumis melo OX=3656 GN=LOC103503504 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.4e-39
Identity = 83/99 (83.84%), Postives = 90/99 (90.91%), Query Frame = 0


Query: 1  MGLLSWWKGGSAPSESNSK-SQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSA 60
          MGLLSWWKG S PS+S SK  QPP KN+SQPAEVPGLNGA+EVPRPAA+VTVFEFGSV+A
Sbjct: 1  MGLLSWWKGQSPPSDSTSKPPQPPSKNLSQPAEVPGLNGALEVPRPAASVTVFEFGSVTA 60

Query: 61 SSDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
          SSD VTL GYCPVSDD EPCRWEI+PASGSDAPLFR+VF
Sbjct: 61 SSDKVTLAGYCPVSDDFEPCRWEIMPASGSDAPLFRIVF 99

[Close]

BLAST of CmaCh19G004410 vs. NCBI nr
Match: XP_022972011.1 (uncharacterized protein LOC111470658 [Cucurbita maxima])

HSP 1 Score: 201.1 bits (510), Expect = 4.5e-48
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60
          MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS
Sbjct: 1  MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60

Query: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
          SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF
Sbjct: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]

BLAST of CmaCh19G004410 vs. NCBI nr
Match: XP_022952897.1 (uncharacterized protein LOC111455443 [Cucurbita moschata] >KAG7011515.1 hypothetical protein SDJN02_26421, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 199.1 bits (505), Expect = 1.7e-47
Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 1  MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60
          MGLLSWWKGGSAPSESNSK QPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS
Sbjct: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60

Query: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
          SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF
Sbjct: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]

BLAST of CmaCh19G004410 vs. NCBI nr
Match: XP_023554244.1 (uncharacterized protein LOC111811567 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 197.2 bits (500), Expect = 6.6e-47
Identity = 96/98 (97.96%), Postives = 96/98 (97.96%), Query Frame = 0


Query: 1  MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60
          MGLLSWWKGGSAPSESNSK QPPPKNVSQP EVPGLNGAVEVPRPAATVTVFEFGSVSAS
Sbjct: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPPEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60

Query: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
          SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF
Sbjct: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]

BLAST of CmaCh19G004410 vs. NCBI nr
Match: XP_038886991.1 (uncharacterized protein LOC120077159 [Benincasa hispida] >XP_038886992.1 uncharacterized protein LOC120077159 [Benincasa hispida])

HSP 1 Score: 183.0 bits (463), Expect = 1.3e-42
Identity = 89/98 (90.82%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 1  MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60
          MGLLSWWKG S PS+SNSK  PP KNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVS+S
Sbjct: 1  MGLLSWWKGQSPPSDSNSKPPPPQKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60

Query: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
          SD VTL GYCPVSDDLEPCRWEILPASGSDAPLFRVVF
Sbjct: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]

BLAST of CmaCh19G004410 vs. NCBI nr
Match: XP_022157409.1 (uncharacterized protein LOC111024112 [Momordica charantia])

HSP 1 Score: 173.7 bits (439), Expect = 7.8e-40
Identity = 86/98 (87.76%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1  MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60
          MGLLSWWKG +APSESNSK QPP  NVSQPAEVPGLNGAVEVPRP  +VTVFEFGSVS+S
Sbjct: 1  MGLLSWWKGEAAPSESNSKPQPPLXNVSQPAEVPGLNGAVEVPRP-GSVTVFEFGSVSSS 60

Query: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
          SD VTL GYCPVSDDLEPCRWEILPA+GSDAPLFRVVF
Sbjct: 61 SDKVTLAGYCPVSDDLEPCRWEILPATGSDAPLFRVVF 97

[Close]

BLAST of CmaCh19G004410 vs. TAIR 10
Match: AT3G59840.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 72 Blast hits to 72 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 121.7 bits (304), Expect = 3.3e-28
Identity = 60/98 (61.22%), Postives = 69/98 (70.41%), Query Frame = 0


Query: 1  MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60
          MG+LSW+ G   PS+S +      +        PG+NGA+EVPRP    TVFEFGSV+A+
Sbjct: 1  MGILSWFTGSPKPSQSETSKPEMIQMPKSETPAPGMNGAIEVPRP-DRATVFEFGSVAAT 60

Query: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
           D VTL GYCPVSDDLEPCRWEILPA G DAP FRVVF
Sbjct: 61 GDRVTLAGYCPVSDDLEPCRWEILPADGKDAPQFRVVF 97

The following BLAST results are available for this feature:

BLAST of CmaCh19G004410 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh19G004410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I4S4	2.2e-48	100.00	uncharacterized protein LOC111470658 OS=Cucurbita maxima OX=3661 GN=LOC111470658...	[more]
A0A6J1GLN4	8.4e-48	98.98	uncharacterized protein LOC111455443 OS=Cucurbita moschata OX=3662 GN=LOC1114554...	[more]
A0A6J1DWE4	3.8e-40	87.76	uncharacterized protein LOC111024112 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A5D3E692	1.4e-39	83.84	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CQC7	1.4e-39	83.84	uncharacterized protein LOC103503504 OS=Cucumis melo OX=3656 GN=LOC103503504 PE=...	[more]

BLAST of CmaCh19G004410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022972011.1	4.5e-48	100.00	uncharacterized protein LOC111470658 [Cucurbita maxima]	[more]
XP_022952897.1	1.7e-47	98.98	uncharacterized protein LOC111455443 [Cucurbita moschata] >KAG7011515.1 hypothet...	[more]
XP_023554244.1	6.6e-47	97.96	uncharacterized protein LOC111811567 [Cucurbita pepo subsp. pepo]	[more]
XP_038886991.1	1.3e-42	90.82	uncharacterized protein LOC120077159 [Benincasa hispida] >XP_038886992.1 unchara...	[more]
XP_022157409.1	7.8e-40	87.76	uncharacterized protein LOC111024112 [Momordica charantia]	[more]

BLAST of CmaCh19G004410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59840.1	3.3e-28	61.22	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G004410.1	CmaCh19G004410.1	mRNA