CmaCh18G005600 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G005600
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Pentatricopeptide repeat-containing protein
Location	Cma_Chr18: 3675169 .. 3677983 (-)
RNA-Seq Expression	CmaCh18G005600
Synteny	CmaCh18G005600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTCGATGCAATTCTTGGCGTCTCTCCGAATTCTAAGGCTCCATGGATTTCTCCACAAATTTTCCTTTCCACAACGATTATCAGTTTCTGCCTCAGCGGGATTTTTCTCCTCATCTCATTTCGATTCCATCTCTTCGCCGCACCGTGATTCTTCTTCTTCTTCATTGCAGTCTCCTGTGCAAACGATTTGTTCATTGGTCATCGAGTCTTATTTTCGCCAACCCCATCTGAGATTCTCTCCTTTTAAGCTGAATCTTGATGTGGATGCTGATTTTTTGACTCACGAGCAAGCCATTTCAGTCGTTGCTTCACTTGCTAGCGAGGAGGGTTCAATGATGGCGTTGAGTTTCTTTTACTGGGCAATCAGATTCCCTAAATTCCGCTATTTCATGCGGCTTTACATAGTTTGTACGATGTTATTGGTTGAGAAATGTAAACAGGAGCGAGCCGATGAAGTGGTGGAGTGTATGATAGGGGTTTTTGCAGAAATTGGGAAGTTGAAGGAGGCTGTGGATATGATCATTGACATGAGAAATCAGGGGCTTGTGTTGACCACCAGAGTAATGAATCGTATAATCATGGTGGCTGCTGAAATGGGGCTGCTCGAATATGCAGGCAACATGTTCGACGAAATGTCTGCAAGAGGTATGGCTCCTAATTCTTGCACTTACAAGTCTATAATTGTTGGTTACTGTAGATATGGCAATGTTTTGGACGTAGATAGGTGGATAAATGAGATGATGGAGAGAGGTTTTGTTGTTGATAATGCCACATTGACTTTGATTATTAATGCTTTTTGTAAAAAGGGCTTTGTAAGCAGAGCATTTTGGTTGTTTCATAAGGTTAAAAAGATGGGTTTATCACCAAATTTGATAAACTATTCATCTATGATTAGTGGGTTATGCAAGAGGGGTAGTGTTAAGCAAGCATTTGAATTATTGGAAGAAATGGTTAGAAATGGCTGGAAACCCAATGTGTATACCCACACATCATTAATCGATGGGCTTTGCAAGAAAGGGTGGACTGATAGAGCTTTTAGACTGTTTCTTAAGCTTGTTAGAAGTGATATTTACAAGCCAAATGTGTACACTTACACAGCCATGATAAGTGGGTATTGCAAAGAGGAGAAATTGAATAGAGCTGAAATGTTGTTTGAAAGAATGAAGGAACAAGGAATGGTTCCAAACACCAACACTTACACTACTCTCATTGATGGACATTGTAAGGCAGGGAATTTCAGTAGAGCCTATGAATTAATGGAGTTTATGTGTAATGAAGGTTTCTTCCCTAATATATGTACTTACAATGCAATGGTTGATGGTCTCTGTAAAAAAGGGAGAGTCGAAGAGGCTTTCAAATTGCTAAATAAAGGGTGTCGGAATCGAGTTGAAGCCGACGCTGTCACATACAACATTCTAATATCTGAACAGTGTAAACATGCCGATTTGAATCGAGCCCTTATGTTTTTAACTAAGATGCTTAAAGTTGGTTTCCAGCCTGATGTCCATTTGTATACCACTTTGATTTCTGCCTTCTGCAGGCAGAAAATGATGAACGATAGCGAAAAGTTGTTCGACGAAGTCGTTAAGCTTGGGTTCGTTCCGACAAAGGAAACTTACACATCCATGATATGTGGCTATTGTAGGGAAAGAAAAATTGGCTTAGCAGTCAAGTTTTTCCAGCGGATGAGTGACCATGGTTGTGCACCAGATAGCATTAGTTATGGTGCTTTAATCAGTGGTCTTTGCAAAGAGTCGAGGTTGGATGAGGCTCGACGATTATATGATGTCATGATAGACAATGGGCTGACTCCGTGCGAGGTTACTCGGGTGACCTTAGCTTATGAGTATTGCAAAACAGAAGAGTTCGCTTCAGCCATGGTTATCTTGGAACGGCTCGACAAGAAGCTTTGGATACACACGGTCCATACTCTAATACGCAAGCTTTGTAGCGAGAAGAAAGTCGGCATGGCAGCTCTTTTCTTTCATAAGTTACTTGATAAGGAAGTCAATGTCGATCGAGTGAGTTTGGCTGCATTCATGACTGCTTGTTGTGAGAGCAACAAATATGCTCTTGTTTCTGATTTGACGGAGAGAATATCAAAAGGTATTGGCTAACCAACTTCTGAACACTTGAATGATACATGATTTTGTTGGACTTAGAATCTCTTGATTTGATTTCTTTTATCATATCTCCTTCCCACTCATTTTTTTAGATTTCGAGTAAGTTTTTTGAGATCTATATACTTGAAAAGGTATCTTATTCGATCTTCTAAACTAAAAAAGCGTTGAAGTTGATTTTAGATTAAAAAAAAACTGAAGAAGATATTGAAAATGGGTCTCGAGCCATGGTGGGATAAGTTCGGAGGAGGAGAAAAAAAAAATAACATAAGAGAGTGGAAAGAAATTTTAGACATTTGATGTTTCTCTATACTAAATGACTCGACTACGTTCTTATAAGGGACATATACCATACATGTCAAGTGATTTTTCGTGCTTGTAAGGACATGTACCATACATGTCAAGTGATTCCTCGTGCTTTAAATCCTTTTTACACTCAATTTTTTTTTTTTTTTTTTGCTAACTTAAACAAGGGAGTTGGTGGAACAAAAACGTCATATTCTTTTCCCCTAATGAAAAGAATATAATTGTACATTATTCAAAGATAAATAATTTTCGTCTATTAGAAGCTTGTGATTGAGTTTTTGATGCAGCAAGTAGGGGCAGGGCAAACAATTCCTCATTGTTGGTACCAAAAAGAAGCGGATTCAGTAGCCCGGGCGATCTCGATTTAATGCCAGCCTGGAAGTGA

mRNA sequence

ATGCCTTCGATGCAATTCTTGGCGTCTCTCCGAATTCTAAGGCTCCATGGATTTCTCCACAAATTTTCCTTTCCACAACGATTATCAGTTTCTGCCTCAGCGGGATTTTTCTCCTCATCTCATTTCGATTCCATCTCTTCGCCGCACCGTGATTCTTCTTCTTCTTCATTGCAGTCTCCTGTGCAAACGATTTGTTCATTGGTCATCGAGTCTTATTTTCGCCAACCCCATCTGAGATTCTCTCCTTTTAAGCTGAATCTTGATGTGGATGCTGATTTTTTGACTCACGAGCAAGCCATTTCAGTCGTTGCTTCACTTGCTAGCGAGGAGGGTTCAATGATGGCGTTGAGTTTCTTTTACTGGGCAATCAGATTCCCTAAATTCCGCTATTTCATGCGGCTTTACATAGTTTGTACGATGTTATTGGTTGAGAAATGTAAACAGGAGCGAGCCGATGAAGTGGTGGAGTGTATGATAGGGGTTTTTGCAGAAATTGGGAAGTTGAAGGAGGCTGTGGATATGATCATTGACATGAGAAATCAGGGGCTTGTGTTGACCACCAGAGTAATGAATCGTATAATCATGGTGGCTGCTGAAATGGGGCTGCTCGAATATGCAGGCAACATGTTCGACGAAATGTCTGCAAGAGGTATGGCTCCTAATTCTTGCACTTACAAGTCTATAATTGTTGGTTACTGTAGATATGGCAATGTTTTGGACGTAGATAGGTGGATAAATGAGATGATGGAGAGAGGTTTTGTTGTTGATAATGCCACATTGACTTTGATTATTAATGCTTTTTGTAAAAAGGGCTTTGTAAGCAGAGCATTTTGGTTGTTTCATAAGGTTAAAAAGATGGGTTTATCACCAAATTTGATAAACTATTCATCTATGATTAGTGGGTTATGCAAGAGGGGTAGTGTTAAGCAAGCATTTGAATTATTGGAAGAAATGGTTAGAAATGGCTGGAAACCCAATGTGTATACCCACACATCATTAATCGATGGGCTTTGCAAGAAAGGGTGGACTGATAGAGCTTTTAGACTGTTTCTTAAGCTTGTTAGAAGTGATATTTACAAGCCAAATGTGTACACTTACACAGCCATGATAAGTGGGTATTGCAAAGAGGAGAAATTGAATAGAGCTGAAATGTTGTTTGAAAGAATGAAGGAACAAGGAATGGTTCCAAACACCAACACTTACACTACTCTCATTGATGGACATTGTAAGGCAGGGAATTTCAGTAGAGCCTATGAATTAATGGAGTTTATGTGTAATGAAGGTTTCTTCCCTAATATATGTACTTACAATGCAATGGTTGATGGTCTCTGTAAAAAAGGGAGAGTCGAAGAGGCTTTCAAATTGCTAAATAAAGGGTGTCGGAATCGAGTTGAAGCCGACGCTGTCACATACAACATTCTAATATCTGAACAGTGTAAACATGCCGATTTGAATCGAGCCCTTATGTTTTTAACTAAGATGCTTAAAGTTGGTTTCCAGCCTGATGTCCATTTGTATACCACTTTGATTTCTGCCTTCTGCAGGCAGAAAATGATGAACGATAGCGAAAAGTTGTTCGACGAAGTCGTTAAGCTTGGGTTCGTTCCGACAAAGGAAACTTACACATCCATGATATGTGGCTATTGTAGGGAAAGAAAAATTGGCTTAGCAGTCAAGTTTTTCCAGCGGATGAGTGACCATGGTTGTGCACCAGATAGCATTAGTTATGGTGCTTTAATCAGTGGTCTTTGCAAAGAGTCGAGGTTGGATGAGGCTCGACGATTATATGATGTCATGATAGACAATGGGCTGACTCCGTGCGAGGTTACTCGGGTGACCTTAGCTTATGAGTATTGCAAAACAGAAGAGTTCGCTTCAGCCATGGTTATCTTGGAACGGCTCGACAAGAAGCTTTGGATACACACGGTCCATACTCTAATACGCAAGCTTTGTAGCGAGAAGAAAGTCGGCATGGCAGCTCTTTTCTTTCATAAGTTACTTGATAAGGAAGTCAATGTCGATCGAGTGAGTTTGGCTGCATTCATGACTGCTTGTTGTGAGAGCAACAAATATGCTCTTGTTTCTGATTTGACGGAGAGAATATCAAAAGCAAGTAGGGGCAGGGCAAACAATTCCTCATTGTTGGTACCAAAAAGAAGCGGATTCAGTAGCCCGGGCGATCTCGATTTAATGCCAGCCTGGAAGTGA

Coding sequence (CDS)

ATGCCTTCGATGCAATTCTTGGCGTCTCTCCGAATTCTAAGGCTCCATGGATTTCTCCACAAATTTTCCTTTCCACAACGATTATCAGTTTCTGCCTCAGCGGGATTTTTCTCCTCATCTCATTTCGATTCCATCTCTTCGCCGCACCGTGATTCTTCTTCTTCTTCATTGCAGTCTCCTGTGCAAACGATTTGTTCATTGGTCATCGAGTCTTATTTTCGCCAACCCCATCTGAGATTCTCTCCTTTTAAGCTGAATCTTGATGTGGATGCTGATTTTTTGACTCACGAGCAAGCCATTTCAGTCGTTGCTTCACTTGCTAGCGAGGAGGGTTCAATGATGGCGTTGAGTTTCTTTTACTGGGCAATCAGATTCCCTAAATTCCGCTATTTCATGCGGCTTTACATAGTTTGTACGATGTTATTGGTTGAGAAATGTAAACAGGAGCGAGCCGATGAAGTGGTGGAGTGTATGATAGGGGTTTTTGCAGAAATTGGGAAGTTGAAGGAGGCTGTGGATATGATCATTGACATGAGAAATCAGGGGCTTGTGTTGACCACCAGAGTAATGAATCGTATAATCATGGTGGCTGCTGAAATGGGGCTGCTCGAATATGCAGGCAACATGTTCGACGAAATGTCTGCAAGAGGTATGGCTCCTAATTCTTGCACTTACAAGTCTATAATTGTTGGTTACTGTAGATATGGCAATGTTTTGGACGTAGATAGGTGGATAAATGAGATGATGGAGAGAGGTTTTGTTGTTGATAATGCCACATTGACTTTGATTATTAATGCTTTTTGTAAAAAGGGCTTTGTAAGCAGAGCATTTTGGTTGTTTCATAAGGTTAAAAAGATGGGTTTATCACCAAATTTGATAAACTATTCATCTATGATTAGTGGGTTATGCAAGAGGGGTAGTGTTAAGCAAGCATTTGAATTATTGGAAGAAATGGTTAGAAATGGCTGGAAACCCAATGTGTATACCCACACATCATTAATCGATGGGCTTTGCAAGAAAGGGTGGACTGATAGAGCTTTTAGACTGTTTCTTAAGCTTGTTAGAAGTGATATTTACAAGCCAAATGTGTACACTTACACAGCCATGATAAGTGGGTATTGCAAAGAGGAGAAATTGAATAGAGCTGAAATGTTGTTTGAAAGAATGAAGGAACAAGGAATGGTTCCAAACACCAACACTTACACTACTCTCATTGATGGACATTGTAAGGCAGGGAATTTCAGTAGAGCCTATGAATTAATGGAGTTTATGTGTAATGAAGGTTTCTTCCCTAATATATGTACTTACAATGCAATGGTTGATGGTCTCTGTAAAAAAGGGAGAGTCGAAGAGGCTTTCAAATTGCTAAATAAAGGGTGTCGGAATCGAGTTGAAGCCGACGCTGTCACATACAACATTCTAATATCTGAACAGTGTAAACATGCCGATTTGAATCGAGCCCTTATGTTTTTAACTAAGATGCTTAAAGTTGGTTTCCAGCCTGATGTCCATTTGTATACCACTTTGATTTCTGCCTTCTGCAGGCAGAAAATGATGAACGATAGCGAAAAGTTGTTCGACGAAGTCGTTAAGCTTGGGTTCGTTCCGACAAAGGAAACTTACACATCCATGATATGTGGCTATTGTAGGGAAAGAAAAATTGGCTTAGCAGTCAAGTTTTTCCAGCGGATGAGTGACCATGGTTGTGCACCAGATAGCATTAGTTATGGTGCTTTAATCAGTGGTCTTTGCAAAGAGTCGAGGTTGGATGAGGCTCGACGATTATATGATGTCATGATAGACAATGGGCTGACTCCGTGCGAGGTTACTCGGGTGACCTTAGCTTATGAGTATTGCAAAACAGAAGAGTTCGCTTCAGCCATGGTTATCTTGGAACGGCTCGACAAGAAGCTTTGGATACACACGGTCCATACTCTAATACGCAAGCTTTGTAGCGAGAAGAAAGTCGGCATGGCAGCTCTTTTCTTTCATAAGTTACTTGATAAGGAAGTCAATGTCGATCGAGTGAGTTTGGCTGCATTCATGACTGCTTGTTGTGAGAGCAACAAATATGCTCTTGTTTCTGATTTGACGGAGAGAATATCAAAAGCAAGTAGGGGCAGGGCAAACAATTCCTCATTGTTGGTACCAAAAAGAAGCGGATTCAGTAGCCCGGGCGATCTCGATTTAATGCCAGCCTGGAAGTGA

Protein sequence

MPSMQFLASLRILRLHGFLHKFSFPQRLSVSASAGFFSSSHFDSISSPHRDSSSSSLQSPVQTICSLVIESYFRQPHLRFSPFKLNLDVDADFLTHEQAISVVASLASEEGSMMALSFFYWAIRFPKFRYFMRLYIVCTMLLVEKCKQERADEVVECMIGVFAEIGKLKEAVDMIIDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRYGNVLDVDRWINEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAYELMEFMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTKETYTSMICGYCRERKIGLAVKFFQRMSDHGCAPDSISYGALISGLCKESRLDEARRLYDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIHTVHTLIRKLCSEKKVGMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISKASRGRANNSSLLVPKRSGFSSPGDLDLMPAWK

Homology

[Close]

BLAST of CmaCh18G005600 vs. ExPASy Swiss-Prot
Match: P0C8Q3 (Pentatricopeptide repeat-containing protein At4g19890 OS=Arabidopsis thaliana OX=3702 GN=At4g19890 PE=2 SV=1)

HSP 1 Score: 861.7 bits (2225), Expect = 6.1e-249
Identity = 423/685 (61.75%), Postives = 522/685 (76.20%), Query Frame = 0


Query: 19  LHKFSFPQRLSVSASAGFFSSSHFDSISSPHRDSSSSSLQSPVQTICSLVIESYFRQPHL 78
           L  F  P  L         SS H  S  S     SSS  Q  V+++CSLV  SY RQ H+
Sbjct: 14  LRTFEIPNSLCSLFFFRLISSDHESSDLSLPSSPSSSPSQCLVKSVCSLVCTSYLRQNHV 73

Query: 79  RFSPFKLNLDVDADFLTHEQAISVVASLASEEGSMMALSFFYWAIRFPKFRYFMRLYIVC 138
             SP ++NLD DA+ LTHEQAI+VVASLASE GSM+AL FFYWA+ F KFR+FMRLY+V 
Sbjct: 74  VSSPHRVNLDFDANSLTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVT 133

Query: 139 TMLLVEKCKQERADEVVECMIGVFAEIGKLKEAVDMIIDMRNQGLVLTTRVMNRIIMVAA 198
              L+     ++A EV+ CM+  F+EIG+L EAV M++DM+NQGL  ++  MN ++ +A 
Sbjct: 134 ADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAV 193

Query: 199 EMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRYGNVLDVDRWINEMMERGFVVDNA 258
           E+GL+EYA N+FDEMS RG+ P+S +YK +++G  R G + + DRW+  M++RGF+ DNA
Sbjct: 194 ELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNA 253

Query: 259 TLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEM 318
           T TLI+ A C+ G V+RA W F K+  +G  PNLIN++S+I GLCK+GS+KQAFE+LEEM
Sbjct: 254 TCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEM 313

Query: 319 VRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDIYKPNVYTYTAMISGYCKEEK 378
           VRNGWKPNVYTHT+LIDGLCK+GWT++AFRLFLKLVRSD YKPNV+TYT+MI GYCKE+K
Sbjct: 314 VRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDK 373

Query: 379 LNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAYELMEFMCNEGFFPNICTYNA 438
           LNRAEMLF RMKEQG+ PN NTYTTLI+GHCKAG+F RAYELM  M +EGF PNI TYNA
Sbjct: 374 LNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNA 433

Query: 439 MVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQCKHADLNRALMFLTKMLKVG 498
            +D LCKK R  EA++LLNK     +EAD VTY ILI EQCK  D+N+AL F  +M K G
Sbjct: 434 AIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTG 493

Query: 499 FQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTKETYTSMICGYCRERKIGLAV 558
           F+ D+ L   LI+AFCRQK M +SE+LF  VV LG +PTKETYTSMI  YC+E  I LA+
Sbjct: 494 FEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLAL 553

Query: 559 KFFQRMSDHGCAPDSISYGALISGLCKESRLDEARRLYDVMIDNGLTPCEVTRVTLAYEY 618
           K+F  M  HGC PDS +YG+LISGLCK+S +DEA +LY+ MID GL+P EVTRVTLAYEY
Sbjct: 554 KYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEY 613

Query: 619 CKTEEFASAMVILERLDKKLWIHTVHTLIRKLCSEKKVGMAALFFHKLLDKEVNVDRVSL 678
           CK  + A+AM++LE LDKKLWI TV TL+RKLCSEKKVG+AALFF KLL+K+ + DRV+L
Sbjct: 614 CKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTL 673

Query: 679 AAFMTACCESNKYALVSDLTERISK 704
           AAF TAC ES K  LV+DLTERIS+
Sbjct: 674 AAFTTACSESGKNNLVTDLTERISR 698

[Close]

BLAST of CmaCh18G005600 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 4.0e-75
Identity = 144/430 (33.49%), Postives = 246/430 (57.21%), Query Frame = 0


Query: 203 LEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRYGNVLDVDRWINEMMERGFVVDNATLTL 262
           + +A N+F EM    ++PN  TY  +I G+C  GN+       ++M  +G + +  T   
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245

Query: 263 IINAFCKKGFVSRAFWLFHKVKKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNG 322
           +I+ +CK   +   F L   +   GL PNLI+Y+ +I+GLC+ G +K+   +L EM R G
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305

Query: 323 WKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDIYKPNVYTYTAMISGYCKEEKLNRA 382
           +  +  T+ +LI G CK+G   +A  +  +++R  +  P+V TYT++I   CK   +NRA
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL-TPSVITYTSLIHSMCKAGNMNRA 365

Query: 383 EMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAYELMEFMCNEGFFPNICTYNAMVDG 442
               ++M+ +G+ PN  TYTTL+DG  + G  + AY ++  M + GF P++ TYNA+++G
Sbjct: 366 MEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 425

Query: 443 LCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQCKHADLNRALMFLTKMLKVGFQPD 502
            C  G++E+A  +L       +  D V+Y+ ++S  C+  D++ AL    +M++ G +PD
Sbjct: 426 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 485

Query: 503 VHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTKETYTSMICGYCRERKIGLAVKFFQ 562
              Y++LI  FC Q+   ++  L++E++++G  P + TYT++I  YC E  +  A++   
Sbjct: 486 TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHN 545

Query: 563 RMSDHGCAPDSISYGALISGLCKESRLDEARRLYDVMIDNGLTPCEVTRVTLAYEYCKTE 622
            M + G  PD ++Y  LI+GL K+SR  EA+RL   +      P +VT  TL  E C   
Sbjct: 546 EMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL-IENCSNI 605

Query: 623 EFASAMVILE 633
           EF S + +++
Sbjct: 606 EFKSVVSLIK 613

[Close]

BLAST of CmaCh18G005600 vs. ExPASy Swiss-Prot
Match: Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.9e-73
Identity = 171/595 (28.74%), Postives = 298/595 (50.08%), Query Frame = 0


Query: 115 ALSFFYWAIRFPKFRYFMRLYIVCTMLLVEKCKQERADEVVECMIGVFAEIGKLKEAVDM 174
           AL+F +W  + P++++ +  Y     LL+         ++   MI     +G     +D+
Sbjct: 106 ALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDL 165

Query: 175 IIDM-RNQGLVLTTRVM----NRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSII 234
              M +++   L  +++    N ++   A  GL++    ++ EM    + PN  TY  ++
Sbjct: 166 CRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMV 225

Query: 235 VGYCRYGNVLDVDRWINEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLS 294
            GYC+ GNV + ++++++++E G   D  T T +I  +C++  +  AF +F+++   G  
Sbjct: 226 NGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCR 285

Query: 295 PNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRL 354
            N + Y+ +I GLC    + +A +L  +M  +   P V T+T LI  LC       A  L
Sbjct: 286 RNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNL 345

Query: 355 FLKLVRSDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHC 414
             ++  + I KPN++TYT +I   C + K  +A  L  +M E+G++PN  TY  LI+G+C
Sbjct: 346 VKEMEETGI-KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 405

Query: 415 KAGNFSRAYELMEFMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKLLNKGCRNRVEADAV 474
           K G    A +++E M +    PN  TYN ++ G C K  V +A  +LNK    +V  D V
Sbjct: 406 KRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVV 465

Query: 475 TYNILISEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEV 534
           TYN LI  QC+  + + A   L+ M   G  PD   YT++I + C+ K + ++  LFD +
Sbjct: 466 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 525

Query: 535 VKLGFVPTKETYTSMICGYCRERKIGLAVKFFQRMSDHGCAPDSISYGALISGLCKESRL 594
            + G  P    YT++I GYC+  K+  A    ++M    C P+S+++ ALI GLC + +L
Sbjct: 526 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 585

Query: 595 DEARRLYDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERL---DKKLWIHTVHTL 654
            EA  L + M+  GL P   T   L +   K  +F  A    +++     K   HT  T 
Sbjct: 586 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 645

Query: 655 IRKLCSEKKVGMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERI 702
           I+  C E ++  A     K+ +  V+ D  + ++ +    +  +     D+ +R+
Sbjct: 646 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698

[Close]

BLAST of CmaCh18G005600 vs. ExPASy Swiss-Prot
Match: Q9T0D6 (Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana OX=3702 GN=At4g11690 PE=2 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.3e-70
Identity = 147/451 (32.59%), Postives = 237/451 (52.55%), Query Frame = 0


Query: 156 ECMIGVFAEIGKLKEAVDMIIDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSA 215
           E +I  + +   L  ++    +M + G V  +   N ++             + F+E  +
Sbjct: 98  EVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKS 157

Query: 216 RGMAPNSCTYKSIIVGYCRYGNVLDVDRWINEMMERGFVVDNATLTLIINAFCKKGFVSR 275
           + +  +  ++  +I G C  G +      + E+ E GF  +    T +I+  CKKG + +
Sbjct: 158 K-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 217

Query: 276 AFWLFHKVKKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLID 335
           A  LF ++ K+GL  N   Y+ +I+GL K G  KQ FE+ E+M  +G  PN+YT+  +++
Sbjct: 218 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 277

Query: 336 GLCKKGWTDRAFRLFLKLVRSDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMV 395
            LCK G T  AF++F ++ R      N+ TY  +I G C+E KLN A  + ++MK  G+ 
Sbjct: 278 QLCKDGRTKDAFQVFDEM-RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 337

Query: 396 PNTNTYTTLIDGHCKAGNFSRAYELMEFMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKL 455
           PN  TY TLIDG C  G   +A  L   + + G  P++ TYN +V G C+KG    A K+
Sbjct: 338 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 397

Query: 456 LNKGCRNRVEADAVTYNILISEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCR 515
           + +     ++   VTY ILI    +  ++ +A+     M ++G  PDVH Y+ LI  FC 
Sbjct: 398 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 457

Query: 516 QKMMNDSEKLFDEVVKLGFVPTKETYTSMICGYCRERKIGLAVKFFQRMSDHGCAPDSIS 575
           +  MN++ +LF  +V+    P +  Y +MI GYC+E     A+K  + M +   AP+  S
Sbjct: 458 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 517

Query: 576 YGALISGLCKESRLDEARRLYDVMIDNGLTP 607
           Y  +I  LCKE +  EA RL + MID+G+ P
Sbjct: 518 YRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546

[Close]

BLAST of CmaCh18G005600 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.5e-69
Identity = 143/471 (30.36%), Postives = 241/471 (51.17%), Query Frame = 0


Query: 167 KLKEAVDMIIDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYK 226
           K   A+ +  +    G+       N +I    ++G ++ A ++   M  +G  P+  +Y 
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285

Query: 227 SIIVGYCRYGNVLDVDRWINEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKM 286
           +++ GYCR+G +  V + I  M  +G   ++     II   C+   ++ A   F ++ + 
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345

Query: 287 GLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRA 346
           G+ P+ + Y+++I G CKRG ++ A +   EM      P+V T+T++I G C+ G    A
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405

Query: 347 FRLFLKLVRSDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLID 406
            +LF ++    + +P+  T+T +I+GYCK   +  A  +   M + G  PN  TYTTLID
Sbjct: 406 GKLFHEMFCKGL-EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 465

Query: 407 GHCKAGNFSRAYELMEFMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKLLNKGCRNRVEA 466
           G CK G+   A EL+  M   G  PNI TYN++V+GLCK G +EEA KL+ +     + A
Sbjct: 466 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 525

Query: 467 DAVTYNILISEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLF 526
           D VTY  L+   CK  ++++A   L +ML  G QP +  +  L++ FC   M+ D EKL 
Sbjct: 526 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 585

Query: 527 DEVVKLGFVPTKETYTSMICGYCRERKIGLAVKFFQRMSDHGCAPDSISYGALISGLCKE 586
           + ++  G  P   T+ S++  YC    +  A   ++ M   G  PD  +Y  L+ G CK 
Sbjct: 586 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 645

Query: 587 SRLDEARRLYDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKK 638
             + EA  L+  M   G +    T   L   + K ++F  A  + +++ ++
Sbjct: 646 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695

[Close]

BLAST of CmaCh18G005600 vs. ExPASy TrEMBL
Match: A0A6J1K602 (pentatricopeptide repeat-containing protein At4g19890 OS=Cucurbita maxima OX=3661 GN=LOC111490387 PE=4 SV=1)

HSP 1 Score: 1415.6 bits (3663), Expect = 0.0e+00
Identity = 703/703 (100.00%), Postives = 703/703 (100.00%), Query Frame = 0


Query: 1   MPSMQFLASLRILRLHGFLHKFSFPQRLSVSASAGFFSSSHFDSISSPHRDSSSSSLQSP 60
           MPSMQFLASLRILRLHGFLHKFSFPQRLSVSASAGFFSSSHFDSISSPHRDSSSSSLQSP
Sbjct: 1   MPSMQFLASLRILRLHGFLHKFSFPQRLSVSASAGFFSSSHFDSISSPHRDSSSSSLQSP 60

Query: 61  VQTICSLVIESYFRQPHLRFSPFKLNLDVDADFLTHEQAISVVASLASEEGSMMALSFFY 120
           VQTICSLVIESYFRQPHLRFSPFKLNLDVDADFLTHEQAISVVASLASEEGSMMALSFFY
Sbjct: 61  VQTICSLVIESYFRQPHLRFSPFKLNLDVDADFLTHEQAISVVASLASEEGSMMALSFFY 120

Query: 121 WAIRFPKFRYFMRLYIVCTMLLVEKCKQERADEVVECMIGVFAEIGKLKEAVDMIIDMRN 180
           WAIRFPKFRYFMRLYIVCTMLLVEKCKQERADEVVECMIGVFAEIGKLKEAVDMIIDMRN
Sbjct: 121 WAIRFPKFRYFMRLYIVCTMLLVEKCKQERADEVVECMIGVFAEIGKLKEAVDMIIDMRN 180

Query: 181 QGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRYGNVLD 240
           QGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRYGNVLD
Sbjct: 181 QGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRYGNVLD 240

Query: 241 VDRWINEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINYSSMIS 300
           VDRWINEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINYSSMIS
Sbjct: 241 VDRWINEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINYSSMIS 300

Query: 301 GLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDIYK 360
           GLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDIYK
Sbjct: 301 GLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDIYK 360

Query: 361 PNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAYEL 420
           PNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAYEL
Sbjct: 361 PNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAYEL 420

Query: 421 MEFMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQCK 480
           MEFMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQCK
Sbjct: 421 MEFMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQCK 480

Query: 481 HADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTKET 540
           HADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTKET
Sbjct: 481 HADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTKET 540

Query: 541 YTSMICGYCRERKIGLAVKFFQRMSDHGCAPDSISYGALISGLCKESRLDEARRLYDVMI 600
           YTSMICGYCRERKIGLAVKFFQRMSDHGCAPDSISYGALISGLCKESRLDEARRLYDVMI
Sbjct: 541 YTSMICGYCRERKIGLAVKFFQRMSDHGCAPDSISYGALISGLCKESRLDEARRLYDVMI 600

Query: 601 DNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIHTVHTLIRKLCSEKKVGMAA 660
           DNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIHTVHTLIRKLCSEKKVGMAA
Sbjct: 601 DNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIHTVHTLIRKLCSEKKVGMAA 660

Query: 661 LFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISK 704
           LFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISK
Sbjct: 661 LFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISK 703

[Close]

BLAST of CmaCh18G005600 vs. ExPASy TrEMBL
Match: A0A6J1GR66 (pentatricopeptide repeat-containing protein At4g19890 OS=Cucurbita moschata OX=3662 GN=LOC111456781 PE=4 SV=1)

HSP 1 Score: 1379.8 bits (3570), Expect = 0.0e+00
Identity = 688/708 (97.18%), Postives = 696/708 (98.31%), Query Frame = 0


Query: 1   MPSMQFLASLRILRLHGFLHKFSFPQRLSVSASAGFFSSSHFDSISSPHRD-----SSSS 60
           MPSMQFLAS+RILRLHGFLHKFSFPQRLSVSASAG FSSSHFDSISSP+RD     SSSS
Sbjct: 1   MPSMQFLASIRILRLHGFLHKFSFPQRLSVSASAGVFSSSHFDSISSPYRDSSSSSSSSS 60

Query: 61  SLQSPVQTICSLVIESYFRQPHLRFSPFKLNLDVDADFLTHEQAISVVASLASEEGSMMA 120
           SLQSPVQTICSLV+ESYFRQPHLRFSPFKLNLD+DADFLTHEQAISVVASLASEEGSMMA
Sbjct: 61  SLQSPVQTICSLVVESYFRQPHLRFSPFKLNLDMDADFLTHEQAISVVASLASEEGSMMA 120

Query: 121 LSFFYWAIRFPKFRYFMRLYIVCTMLLVEKCKQERADEVVECMIGVFAEIGKLKEAVDMI 180
           LSFFYWAI FPKFRYFMRLYIVCTMLLV KCKQERADEVVECMIGVFAEIGKLKEAVDMI
Sbjct: 121 LSFFYWAIGFPKFRYFMRLYIVCTMLLVGKCKQERADEVVECMIGVFAEIGKLKEAVDMI 180

Query: 181 IDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRY 240
           IDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRY
Sbjct: 181 IDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRY 240

Query: 241 GNVLDVDRWINEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINY 300
           GNVLDVDRW+NEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINY
Sbjct: 241 GNVLDVDRWLNEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINY 300

Query: 301 SSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVR 360
           SSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVR
Sbjct: 301 SSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVR 360

Query: 361 SDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFS 420
           SDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFS
Sbjct: 361 SDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFS 420

Query: 421 RAYELMEFMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILI 480
           RAYELME MCNEGFFPNICTYNA+VDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILI
Sbjct: 421 RAYELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILI 480

Query: 481 SEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFV 540
           SEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFV
Sbjct: 481 SEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFV 540

Query: 541 PTKETYTSMICGYCRERKIGLAVKFFQRMSDHGCAPDSISYGALISGLCKESRLDEARRL 600
           PTKETYTSMICGYCRERKI LAVKFFQRM+ HGCAPDSISYGALISGLCKESRLDEAR+L
Sbjct: 541 PTKETYTSMICGYCRERKIDLAVKFFQRMNVHGCAPDSISYGALISGLCKESRLDEARQL 600

Query: 601 YDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIHTVHTLIRKLCSEKK 660
           YDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWI TVHTLIRKLCSEKK
Sbjct: 601 YDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIRTVHTLIRKLCSEKK 660

Query: 661 VGMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISK 704
           VGMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISK
Sbjct: 661 VGMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISK 708

[Close]

BLAST of CmaCh18G005600 vs. ExPASy TrEMBL
Match: A0A0A0LYL9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701980 PE=4 SV=1)

HSP 1 Score: 1196.8 bits (3095), Expect = 0.0e+00
Identity = 592/705 (83.97%), Postives = 641/705 (90.92%), Query Frame = 0


Query: 1   MPSMQFLASLRILRLHGFLHKF-SFPQRLSVSASAGFFSSSHFDSISSPHRD-SSSSSLQ 60
           +P MQFLASLRILR HGFL K  SF Q  S SAS  FFSS+HFDSISSPH D SSSSSLQ
Sbjct: 21  IPLMQFLASLRILRPHGFLQKLCSFQQGSSASASLAFFSSTHFDSISSPHHDFSSSSSLQ 80

Query: 61  SPVQTICSLVIESYFRQPHLRFSPFKLNLDVDADFLTHEQAISVVASLASEEGSMMALSF 120
           SP++ ICSLV+++Y RQPHLRFSP KLNLD+DA  LTHEQAIS VA LASEEGSM+ALSF
Sbjct: 81  SPLKKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQAISAVALLASEEGSMVALSF 140

Query: 121 FYWAIRFPKFRYFMRLYIVCTMLLVEKCKQERADEVVECMIGVFAEIGKLKEAVDMIIDM 180
           FYWA+ FPKFRYFMRLYIVCTM LV KC  ERA EVVECM+GVFAEIGKLKEAVDMI+DM
Sbjct: 141 FYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDM 200

Query: 181 RNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRYGNV 240
           RNQGLVLTTRVMNRII+VAAEM L+EYAGN+FDEMSARG+ P+SCTYK IIVGYCR GNV
Sbjct: 201 RNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNV 260

Query: 241 LDVDRWINEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINYSSM 300
           L+ DRWI EMMERGFVVDNATLTLII AFC+K  V+RA W FHKV KMGLSPNLINYSSM
Sbjct: 261 LEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSM 320

Query: 301 ISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDI 360
           ISGLCKRGSVKQAFELLEEMV+NGWKPNVYTHTSLI GLCKKGWT+RAFRLFLKL+RSD 
Sbjct: 321 ISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDN 380

Query: 361 YKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAY 420
           YKPNV+TYTAMISGYCKEEKL+RAEMLFERMKEQG+VPNTNTYTTLIDGHCKAGNFS+AY
Sbjct: 381 YKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAY 440

Query: 421 ELMEFMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQ 480
           ELME M NEGFFPN CTYN++VDGLCK+GR EEAFKLLN G +N++EAD VTY ILISEQ
Sbjct: 441 ELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQ 500

Query: 481 CKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTK 540
           CK AD+N+AL+FL KM KVGFQPD+HLYTTLI+AFCRQ MM DSEKLFDEV+KLG  PTK
Sbjct: 501 CKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTK 560

Query: 541 ETYTSMICGYCRERKIGLAVKFFQRMSDHGCAPDSISYGALISGLCKESRLDEARRLYDV 600
           ETYTSMICGYCRE+K+ LAVKFFQ+MSDHGCAPDSISYGALISGLCKESRLDEAR+LYD 
Sbjct: 561 ETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDT 620

Query: 601 MIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIHTVHTLIRKLCSEKKVGM 660
           MID GL+PCEVTRVTL YEYCKTE+FASAMVILERL+KKLWI TVHTLIRKLC EKKV +
Sbjct: 621 MIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHTLIRKLCCEKKVAL 680

Query: 661 AALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISK 704
           AALFFHKLLDKEVNVDRV+LAAF TAC ESNKYALVSDL+ERISK
Sbjct: 681 AALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLSERISK 725

[Close]

BLAST of CmaCh18G005600 vs. ExPASy TrEMBL
Match: A0A5A7TNN8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00240 PE=4 SV=1)

HSP 1 Score: 1195.3 bits (3091), Expect = 0.0e+00
Identity = 592/701 (84.45%), Postives = 639/701 (91.16%), Query Frame = 0


Query: 4   MQFLASLRILRLHGFLHKF-SFPQRLSVSASAGFFSSSHFDSISSPHRDSSSSSLQSPVQ 63
           MQFLAS RILR HGFL K  S     SVSAS  FFSS+HFDSISSPH D SSSSLQSPVQ
Sbjct: 1   MQFLASHRILRTHGFLQKLCSLQHGSSVSASIAFFSSTHFDSISSPHHDFSSSSLQSPVQ 60

Query: 64  TICSLVIESYFRQPHLRFSPFKLNLDVDADFLTHEQAISVVASLASEEGSMMALSFFYWA 123
             CSLV+E+Y RQPHLRFSP KLNLD+DAD LTHEQAIS VASLASEEGSM+ALSFFYWA
Sbjct: 61  KTCSLVLEAYLRQPHLRFSPSKLNLDMDADSLTHEQAISAVASLASEEGSMVALSFFYWA 120

Query: 124 IRFPKFRYFMRLYIVCTMLLVEKCKQERADEVVECMIGVFAEIGKLKEAVDMIIDMRNQG 183
           I FPKFRYFMRLYIVCTM L+ KC  ERA EVVECM+GVFAEIGKLKEAVDMI+DMRNQG
Sbjct: 121 IGFPKFRYFMRLYIVCTMSLIGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQG 180

Query: 184 LVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRYGNVLDVD 243
           LVLTTRVMNRII+VAA MGL+EYAGN+FDEMSARG+ P+SCTYKSIIVGYCR G+VL+ D
Sbjct: 181 LVLTTRVMNRIILVAAGMGLVEYAGNVFDEMSARGVYPDSCTYKSIIVGYCRNGDVLEAD 240

Query: 244 RWINEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINYSSMISGL 303
           RWI EMMERGFVVDNATLTLII AFC+K  V+RA W FHKV KMGLSPNLINYSSMISGL
Sbjct: 241 RWICEMMERGFVVDNATLTLIIKAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGL 300

Query: 304 CKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDIYKPN 363
           CKRGSVKQAFELLEEMV+NGWKPNVYTHTSLI GLCKKGWT+RAFRLFLKLVRSD YKPN
Sbjct: 301 CKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLVRSDNYKPN 360

Query: 364 VYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAYELME 423
           V+TYTAMISGYCKE+KL+RAEMLFERMKEQG+VPNTNTYTTLIDGHCKAGNFS+AYELME
Sbjct: 361 VHTYTAMISGYCKEDKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELME 420

Query: 424 FMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQCKHA 483
            M NEGFFPNICTYNA+VDGLCK+GR EEAF+LL+KG +N++EAD VTY ILISEQCK A
Sbjct: 421 LMSNEGFFPNICTYNAIVDGLCKRGRAEEAFELLSKGFQNQIEADGVTYTILISEQCKRA 480

Query: 484 DLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTKETYT 543
           D+N AL+FL KM KVGFQPD+HLYTTLI+AFCRQ+MM DSEKLFDEVVKLG  PTKETYT
Sbjct: 481 DMNHALVFLNKMFKVGFQPDIHLYTTLIAAFCRQRMMKDSEKLFDEVVKLGLAPTKETYT 540

Query: 544 SMICGYCRERKIGLAVKFFQRMSDHGCAPDSISYGALISGLCKESRLDEARRLYDVMIDN 603
           SMICGYCRE+ I LAVKFFQ+MSD GCAPDSISYGALISGLCKESRLDEAR+LYD MID 
Sbjct: 541 SMICGYCREKNISLAVKFFQKMSDQGCAPDSISYGALISGLCKESRLDEARQLYDTMIDK 600

Query: 604 GLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIHTVHTLIRKLCSEKKVGMAALF 663
           GL+PCEVTRV+LAYEYCKTE+ ASAMVILERL+KKLWI TVHTLIRKLC EKKV +AALF
Sbjct: 601 GLSPCEVTRVSLAYEYCKTEDCASAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAALF 660

Query: 664 FHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISK 704
           FHKLLDKEVNVDRV+LAAF+TAC ESNKYALVSDL+ERISK
Sbjct: 661 FHKLLDKEVNVDRVTLAAFITACTESNKYALVSDLSERISK 701

[Close]

BLAST of CmaCh18G005600 vs. ExPASy TrEMBL
Match: A0A1S3CAH0 (pentatricopeptide repeat-containing protein At4g19890 OS=Cucumis melo OX=3656 GN=LOC103498266 PE=4 SV=1)

HSP 1 Score: 1195.3 bits (3091), Expect = 0.0e+00
Identity = 592/701 (84.45%), Postives = 639/701 (91.16%), Query Frame = 0


Query: 4   MQFLASLRILRLHGFLHKF-SFPQRLSVSASAGFFSSSHFDSISSPHRDSSSSSLQSPVQ 63
           MQFLAS RILR HGFL K  S     SVSAS  FFSS+HFDSISSPH D SSSSLQSPVQ
Sbjct: 1   MQFLASHRILRTHGFLQKLCSLQHGSSVSASIAFFSSTHFDSISSPHHDFSSSSLQSPVQ 60

Query: 64  TICSLVIESYFRQPHLRFSPFKLNLDVDADFLTHEQAISVVASLASEEGSMMALSFFYWA 123
             CSLV+E+Y RQPHLRFSP KLNLD+DAD LTHEQAIS VASLASEEGSM+ALSFFYWA
Sbjct: 61  KTCSLVLEAYLRQPHLRFSPSKLNLDMDADSLTHEQAISAVASLASEEGSMVALSFFYWA 120

Query: 124 IRFPKFRYFMRLYIVCTMLLVEKCKQERADEVVECMIGVFAEIGKLKEAVDMIIDMRNQG 183
           I FPKFRYFMRLYIVCTM L+ KC  ERA EVVECM+GVFAEIGKLKEAVDMI+DMRNQG
Sbjct: 121 IGFPKFRYFMRLYIVCTMSLIGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQG 180

Query: 184 LVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRYGNVLDVD 243
           LVLTTRVMNRII+VAA MGL+EYAGN+FDEMSARG+ P+SCTYKSIIVGYCR G+VL+ D
Sbjct: 181 LVLTTRVMNRIILVAAGMGLVEYAGNVFDEMSARGVYPDSCTYKSIIVGYCRNGDVLEAD 240

Query: 244 RWINEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINYSSMISGL 303
           RWI EMMERGFVVDNATLTLII AFC+K  V+RA W FHKV KMGLSPNLINYSSMISGL
Sbjct: 241 RWICEMMERGFVVDNATLTLIIKAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGL 300

Query: 304 CKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDIYKPN 363
           CKRGSVKQAFELLEEMV+NGWKPNVYTHTSLI GLCKKGWT+RAFRLFLKLVRSD YKPN
Sbjct: 301 CKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLVRSDNYKPN 360

Query: 364 VYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAYELME 423
           V+TYTAMISGYCKE+KL+RAEMLFERMKEQG+VPNTNTYTTLIDGHCKAGNFS+AYELME
Sbjct: 361 VHTYTAMISGYCKEDKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELME 420

Query: 424 FMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQCKHA 483
            M NEGFFPNICTYNA+VDGLCK+GR EEAF+LL+KG +N++EAD VTY ILISEQCK A
Sbjct: 421 LMSNEGFFPNICTYNAIVDGLCKRGRAEEAFELLSKGFQNQIEADGVTYTILISEQCKRA 480

Query: 484 DLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTKETYT 543
           D+N AL+FL KM KVGFQPD+HLYTTLI+AFCRQ+MM DSEKLFDEVVKLG  PTKETYT
Sbjct: 481 DMNHALVFLNKMFKVGFQPDIHLYTTLIAAFCRQRMMKDSEKLFDEVVKLGLAPTKETYT 540

Query: 544 SMICGYCRERKIGLAVKFFQRMSDHGCAPDSISYGALISGLCKESRLDEARRLYDVMIDN 603
           SMICGYCRE+ I LAVKFFQ+MSD GCAPDSISYGALISGLCKESRLDEAR+LYD MID 
Sbjct: 541 SMICGYCREKNISLAVKFFQKMSDQGCAPDSISYGALISGLCKESRLDEARQLYDTMIDK 600

Query: 604 GLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIHTVHTLIRKLCSEKKVGMAALF 663
           GL+PCEVTRV+LAYEYCKTE+ ASAMVILERL+KKLWI TVHTLIRKLC EKKV +AALF
Sbjct: 601 GLSPCEVTRVSLAYEYCKTEDCASAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAALF 660

Query: 664 FHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISK 704
           FHKLLDKEVNVDRV+LAAF+TAC ESNKYALVSDL+ERISK
Sbjct: 661 FHKLLDKEVNVDRVTLAAFITACTESNKYALVSDLSERISK 701

[Close]

BLAST of CmaCh18G005600 vs. NCBI nr
Match: XP_022994748.1 (pentatricopeptide repeat-containing protein At4g19890 [Cucurbita maxima])

HSP 1 Score: 1415.6 bits (3663), Expect = 0.0e+00
Identity = 703/703 (100.00%), Postives = 703/703 (100.00%), Query Frame = 0


Query: 1   MPSMQFLASLRILRLHGFLHKFSFPQRLSVSASAGFFSSSHFDSISSPHRDSSSSSLQSP 60
           MPSMQFLASLRILRLHGFLHKFSFPQRLSVSASAGFFSSSHFDSISSPHRDSSSSSLQSP
Sbjct: 1   MPSMQFLASLRILRLHGFLHKFSFPQRLSVSASAGFFSSSHFDSISSPHRDSSSSSLQSP 60

Query: 61  VQTICSLVIESYFRQPHLRFSPFKLNLDVDADFLTHEQAISVVASLASEEGSMMALSFFY 120
           VQTICSLVIESYFRQPHLRFSPFKLNLDVDADFLTHEQAISVVASLASEEGSMMALSFFY
Sbjct: 61  VQTICSLVIESYFRQPHLRFSPFKLNLDVDADFLTHEQAISVVASLASEEGSMMALSFFY 120

Query: 121 WAIRFPKFRYFMRLYIVCTMLLVEKCKQERADEVVECMIGVFAEIGKLKEAVDMIIDMRN 180
           WAIRFPKFRYFMRLYIVCTMLLVEKCKQERADEVVECMIGVFAEIGKLKEAVDMIIDMRN
Sbjct: 121 WAIRFPKFRYFMRLYIVCTMLLVEKCKQERADEVVECMIGVFAEIGKLKEAVDMIIDMRN 180

Query: 181 QGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRYGNVLD 240
           QGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRYGNVLD
Sbjct: 181 QGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRYGNVLD 240

Query: 241 VDRWINEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINYSSMIS 300
           VDRWINEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINYSSMIS
Sbjct: 241 VDRWINEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINYSSMIS 300

Query: 301 GLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDIYK 360
           GLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDIYK
Sbjct: 301 GLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDIYK 360

Query: 361 PNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAYEL 420
           PNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAYEL
Sbjct: 361 PNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAYEL 420

Query: 421 MEFMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQCK 480
           MEFMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQCK
Sbjct: 421 MEFMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQCK 480

Query: 481 HADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTKET 540
           HADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTKET
Sbjct: 481 HADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTKET 540

Query: 541 YTSMICGYCRERKIGLAVKFFQRMSDHGCAPDSISYGALISGLCKESRLDEARRLYDVMI 600
           YTSMICGYCRERKIGLAVKFFQRMSDHGCAPDSISYGALISGLCKESRLDEARRLYDVMI
Sbjct: 541 YTSMICGYCRERKIGLAVKFFQRMSDHGCAPDSISYGALISGLCKESRLDEARRLYDVMI 600

Query: 601 DNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIHTVHTLIRKLCSEKKVGMAA 660
           DNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIHTVHTLIRKLCSEKKVGMAA
Sbjct: 601 DNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIHTVHTLIRKLCSEKKVGMAA 660

Query: 661 LFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISK 704
           LFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISK
Sbjct: 661 LFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISK 703

[Close]

BLAST of CmaCh18G005600 vs. NCBI nr
Match: XP_022954541.1 (pentatricopeptide repeat-containing protein At4g19890 [Cucurbita moschata])

HSP 1 Score: 1379.8 bits (3570), Expect = 0.0e+00
Identity = 688/708 (97.18%), Postives = 696/708 (98.31%), Query Frame = 0


Query: 1   MPSMQFLASLRILRLHGFLHKFSFPQRLSVSASAGFFSSSHFDSISSPHRD-----SSSS 60
           MPSMQFLAS+RILRLHGFLHKFSFPQRLSVSASAG FSSSHFDSISSP+RD     SSSS
Sbjct: 1   MPSMQFLASIRILRLHGFLHKFSFPQRLSVSASAGVFSSSHFDSISSPYRDSSSSSSSSS 60

Query: 61  SLQSPVQTICSLVIESYFRQPHLRFSPFKLNLDVDADFLTHEQAISVVASLASEEGSMMA 120
           SLQSPVQTICSLV+ESYFRQPHLRFSPFKLNLD+DADFLTHEQAISVVASLASEEGSMMA
Sbjct: 61  SLQSPVQTICSLVVESYFRQPHLRFSPFKLNLDMDADFLTHEQAISVVASLASEEGSMMA 120

Query: 121 LSFFYWAIRFPKFRYFMRLYIVCTMLLVEKCKQERADEVVECMIGVFAEIGKLKEAVDMI 180
           LSFFYWAI FPKFRYFMRLYIVCTMLLV KCKQERADEVVECMIGVFAEIGKLKEAVDMI
Sbjct: 121 LSFFYWAIGFPKFRYFMRLYIVCTMLLVGKCKQERADEVVECMIGVFAEIGKLKEAVDMI 180

Query: 181 IDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRY 240
           IDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRY
Sbjct: 181 IDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRY 240

Query: 241 GNVLDVDRWINEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINY 300
           GNVLDVDRW+NEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINY
Sbjct: 241 GNVLDVDRWLNEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINY 300

Query: 301 SSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVR 360
           SSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVR
Sbjct: 301 SSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVR 360

Query: 361 SDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFS 420
           SDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFS
Sbjct: 361 SDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFS 420

Query: 421 RAYELMEFMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILI 480
           RAYELME MCNEGFFPNICTYNA+VDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILI
Sbjct: 421 RAYELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILI 480

Query: 481 SEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFV 540
           SEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFV
Sbjct: 481 SEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFV 540

Query: 541 PTKETYTSMICGYCRERKIGLAVKFFQRMSDHGCAPDSISYGALISGLCKESRLDEARRL 600
           PTKETYTSMICGYCRERKI LAVKFFQRM+ HGCAPDSISYGALISGLCKESRLDEAR+L
Sbjct: 541 PTKETYTSMICGYCRERKIDLAVKFFQRMNVHGCAPDSISYGALISGLCKESRLDEARQL 600

Query: 601 YDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIHTVHTLIRKLCSEKK 660
           YDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWI TVHTLIRKLCSEKK
Sbjct: 601 YDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIRTVHTLIRKLCSEKK 660

Query: 661 VGMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISK 704
           VGMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISK
Sbjct: 661 VGMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISK 708

[Close]

BLAST of CmaCh18G005600 vs. NCBI nr
Match: XP_023541359.1 (pentatricopeptide repeat-containing protein At4g19890 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1374.8 bits (3557), Expect = 0.0e+00
Identity = 687/707 (97.17%), Postives = 693/707 (98.02%), Query Frame = 0


Query: 1   MPSMQFLASLRILRLHGFLHKFSFPQRLSVSASAGFFSSSHFDSISSPHRDSSS----SS 60
           MPSMQFLASLRILRLHGFLHKFSFPQRLSVSASAG FSSSHFDSISSPHRDSSS    SS
Sbjct: 1   MPSMQFLASLRILRLHGFLHKFSFPQRLSVSASAGLFSSSHFDSISSPHRDSSSSSSCSS 60

Query: 61  LQSPVQTICSLVIESYFRQPHLRFSPFKLNLDVDADFLTHEQAISVVASLASEEGSMMAL 120
           LQSPVQTICSLVIESYFRQPHLRFSP KLNLD+DADFLTHEQAISVVASLASEEGSMMAL
Sbjct: 61  LQSPVQTICSLVIESYFRQPHLRFSPLKLNLDMDADFLTHEQAISVVASLASEEGSMMAL 120

Query: 121 SFFYWAIRFPKFRYFMRLYIVCTMLLVEKCKQERADEVVECMIGVFAEIGKLKEAVDMII 180
           SFFYWAI FPKFRYFMRLYIVCTMLLV KCKQERADEVVECMIGVFAEIGKLKEAVDMII
Sbjct: 121 SFFYWAIGFPKFRYFMRLYIVCTMLLVGKCKQERADEVVECMIGVFAEIGKLKEAVDMII 180

Query: 181 DMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRYG 240
           DMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVG CRYG
Sbjct: 181 DMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGNCRYG 240

Query: 241 NVLDVDRWINEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINYS 300
           NVLDVDRW+NEMMERGFVVDNATLTLIINAFCKK FVSRAFWLFHKVKKMGLSPNLINYS
Sbjct: 241 NVLDVDRWLNEMMERGFVVDNATLTLIINAFCKKSFVSRAFWLFHKVKKMGLSPNLINYS 300

Query: 301 SMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRS 360
           SMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRS
Sbjct: 301 SMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRS 360

Query: 361 DIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSR 420
           DIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSR
Sbjct: 361 DIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSR 420

Query: 421 AYELMEFMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILIS 480
           AYELME MCNEGFFPNICTYNA+VDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILIS
Sbjct: 421 AYELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILIS 480

Query: 481 EQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVP 540
           EQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVP
Sbjct: 481 EQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVP 540

Query: 541 TKETYTSMICGYCRERKIGLAVKFFQRMSDHGCAPDSISYGALISGLCKESRLDEARRLY 600
           TKETYTSMICGYCRERKI LAVKFFQRM+ HGCAPDSISYGALISGLCKESRLDEAR+LY
Sbjct: 541 TKETYTSMICGYCRERKIDLAVKFFQRMNVHGCAPDSISYGALISGLCKESRLDEARQLY 600

Query: 601 DVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIHTVHTLIRKLCSEKKV 660
           DVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWI TVHTLIRKLCSEKKV
Sbjct: 601 DVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIRTVHTLIRKLCSEKKV 660

Query: 661 GMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISK 704
           GMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERIS+
Sbjct: 661 GMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISR 707

[Close]

BLAST of CmaCh18G005600 vs. NCBI nr
Match: KAG6573462.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012609.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1372.5 bits (3551), Expect = 0.0e+00
Identity = 686/712 (96.35%), Postives = 692/712 (97.19%), Query Frame = 0


Query: 1   MPSMQFLASLRILRLHGFLHKFSFPQRLSVSASAGFFSSSHFDSISSPHRD--------- 60
           MPSMQFLASLRILRLHGFLHKFSFPQR SVSASAG FSSSHFDSISSPHRD         
Sbjct: 1   MPSMQFLASLRILRLHGFLHKFSFPQRFSVSASAGVFSSSHFDSISSPHRDSSSSSSSSS 60

Query: 61  SSSSSLQSPVQTICSLVIESYFRQPHLRFSPFKLNLDVDADFLTHEQAISVVASLASEEG 120
           SSSSSLQSPVQTICSLV+ESYFRQPHLRFSPFKLNLD+DAD LTHEQAISVVASLASEEG
Sbjct: 61  SSSSSLQSPVQTICSLVVESYFRQPHLRFSPFKLNLDMDADVLTHEQAISVVASLASEEG 120

Query: 121 SMMALSFFYWAIRFPKFRYFMRLYIVCTMLLVEKCKQERADEVVECMIGVFAEIGKLKEA 180
           SMMALSFFYWAI FPKFRYFMRLYIVCTMLLV KCKQERADEVVECMIGVFAEIGKLKE 
Sbjct: 121 SMMALSFFYWAIGFPKFRYFMRLYIVCTMLLVGKCKQERADEVVECMIGVFAEIGKLKEV 180

Query: 181 VDMIIDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVG 240
           VDMIIDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVG
Sbjct: 181 VDMIIDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVG 240

Query: 241 YCRYGNVLDVDRWINEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPN 300
           YCRYGNVLDVDRW+NEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPN
Sbjct: 241 YCRYGNVLDVDRWLNEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPN 300

Query: 301 LINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFL 360
           LINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFL
Sbjct: 301 LINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFL 360

Query: 361 KLVRSDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKA 420
           KLVRSDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKA
Sbjct: 361 KLVRSDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKA 420

Query: 421 GNFSRAYELMEFMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTY 480
           GNFSRAYELME MCNEGFFPNICTYNA+VDGLCKKGRVEEAFKLLNKGCRNRVEADAVTY
Sbjct: 421 GNFSRAYELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTY 480

Query: 481 NILISEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVK 540
           NILISEQCKHADLNRALMFLTKMLKVG QPDVHLYTTLISAFCRQKMMNDSEKLFDEVVK
Sbjct: 481 NILISEQCKHADLNRALMFLTKMLKVGCQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVK 540

Query: 541 LGFVPTKETYTSMICGYCRERKIGLAVKFFQRMSDHGCAPDSISYGALISGLCKESRLDE 600
           LGFVPTKETYTSMICGYCRERKI LAVKFFQRM+ HGCAPDSISYGALISGLCKESRLDE
Sbjct: 541 LGFVPTKETYTSMICGYCRERKIDLAVKFFQRMNVHGCAPDSISYGALISGLCKESRLDE 600

Query: 601 ARRLYDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIHTVHTLIRKLC 660
           AR+LYDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWI TVHTLIRKLC
Sbjct: 601 ARQLYDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIRTVHTLIRKLC 660

Query: 661 SEKKVGMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISK 704
           SEKKVGMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISK
Sbjct: 661 SEKKVGMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISK 712

[Close]

BLAST of CmaCh18G005600 vs. NCBI nr
Match: XP_038895547.1 (pentatricopeptide repeat-containing protein At4g19890 isoform X2 [Benincasa hispida])

HSP 1 Score: 1212.2 bits (3135), Expect = 0.0e+00
Identity = 602/704 (85.51%), Postives = 647/704 (91.90%), Query Frame = 0


Query: 4   MQFLASLRILRLHGFLHKFS-FPQRLSVSASAGFFSSSHFDSISSPHRD-SSSSSLQSPV 63
           MQFLASLRILR HGFL K   F QR SVSAS  FFSS+H  SISS H D SSSSSLQSPV
Sbjct: 1   MQFLASLRILRPHGFLQKLCFFQQRSSVSASMPFFSSTHLGSISSLHNDSSSSSSLQSPV 60

Query: 64  QTICSLVIESYFRQPHLRFSPFKLNLDVDADFLTHEQAISVVASLASEEGSMMALSFFYW 123
           QTICSLV+++YFRQPHLRFSP KLNLD+DAD LTHEQAISVVASLASEEGSM+ALSFFYW
Sbjct: 61  QTICSLVLQTYFRQPHLRFSPSKLNLDMDADSLTHEQAISVVASLASEEGSMVALSFFYW 120

Query: 124 AIRFPKFRYFMRLYIVCTMLLVEKCKQERADEVVECMIGVFAEIGKLKEAVDMIIDMRNQ 183
           AI FPKFR+FMRLYIVCTM L+ KC  ERA EVVECM+G FAEIGKLKEAVDMI DMRNQ
Sbjct: 121 AIGFPKFRHFMRLYIVCTMSLIGKCNLERAREVVECMVGAFAEIGKLKEAVDMIFDMRNQ 180

Query: 184 GLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRYGNVLDV 243
           GLVLTTRVMNR IMVAAEMGLLEYAGN+FDEMSARG++P+SCTYKSII GYCR G+VL+ 
Sbjct: 181 GLVLTTRVMNRTIMVAAEMGLLEYAGNVFDEMSARGVSPDSCTYKSIIAGYCRIGDVLEA 240

Query: 244 DRWINEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINYSSMISG 303
           DRWI EMMERGFVVDNATLTLII AFC+K +V+RA W FHKV KMGLSPNLINYSSMI+G
Sbjct: 241 DRWICEMMERGFVVDNATLTLIIKAFCEKSYVNRALWFFHKVSKMGLSPNLINYSSMING 300

Query: 304 LCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDIYKP 363
           LCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLI GLCKKGWT+RAFRLFLKLVRSD YKP
Sbjct: 301 LCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLVRSDNYKP 360

Query: 364 NVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAYELM 423
           NV+TYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFS+AYELM
Sbjct: 361 NVHTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSKAYELM 420

Query: 424 EFMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQCKH 483
           + MCNEGFFPNICTYNA+VD LCK+GR EEAFKLLNKG RN++EAD+VTY ILISEQCK 
Sbjct: 421 DLMCNEGFFPNICTYNAIVDSLCKRGRAEEAFKLLNKGFRNQIEADSVTYTILISEQCKR 480

Query: 484 ADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTKETY 543
           AD+N+ALMFL KM KVGFQPD+HLYTTLI+AFCR+KMM DSEKLF EVVKLG  PTKETY
Sbjct: 481 ADMNQALMFLNKMFKVGFQPDIHLYTTLIAAFCREKMMKDSEKLFAEVVKLGLAPTKETY 540

Query: 544 TSMICGYCRERKIGLAVKFFQRMSDHGCAPDSISYGALISGLCKESRLDEARRLYDVMID 603
           TSMICGYCRERKI LAVKFFQ+MSDHGCAPDSISYG+LISGLCKESRLDEAR+LYD MID
Sbjct: 541 TSMICGYCRERKISLAVKFFQKMSDHGCAPDSISYGSLISGLCKESRLDEARQLYDNMID 600

Query: 604 NGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIHTVHTLIRKLCSEKKVGMAAL 663
            GL+PCEVTRVTL YEYCK E+FASAMVILE+LDKKLWI TVHTLIRKLC EKKV MAAL
Sbjct: 601 KGLSPCEVTRVTLIYEYCKAEDFASAMVILEQLDKKLWIPTVHTLIRKLCCEKKVAMAAL 660

Query: 664 FFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISKAS 706
           FFHKLLDK+V+VD V+LAAF+TACCESNKYALVSDL+ERIS+AS
Sbjct: 661 FFHKLLDKQVSVDHVTLAAFITACCESNKYALVSDLSERISRAS 704

[Close]

BLAST of CmaCh18G005600 vs. TAIR 10
Match: AT4G19890.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 861.7 bits (2225), Expect = 4.3e-250
Identity = 423/685 (61.75%), Postives = 522/685 (76.20%), Query Frame = 0


Query: 19  LHKFSFPQRLSVSASAGFFSSSHFDSISSPHRDSSSSSLQSPVQTICSLVIESYFRQPHL 78
           L  F  P  L         SS H  S  S     SSS  Q  V+++CSLV  SY RQ H+
Sbjct: 14  LRTFEIPNSLCSLFFFRLISSDHESSDLSLPSSPSSSPSQCLVKSVCSLVCTSYLRQNHV 73

Query: 79  RFSPFKLNLDVDADFLTHEQAISVVASLASEEGSMMALSFFYWAIRFPKFRYFMRLYIVC 138
             SP ++NLD DA+ LTHEQAI+VVASLASE GSM+AL FFYWA+ F KFR+FMRLY+V 
Sbjct: 74  VSSPHRVNLDFDANSLTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVT 133

Query: 139 TMLLVEKCKQERADEVVECMIGVFAEIGKLKEAVDMIIDMRNQGLVLTTRVMNRIIMVAA 198
              L+     ++A EV+ CM+  F+EIG+L EAV M++DM+NQGL  ++  MN ++ +A 
Sbjct: 134 ADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAV 193

Query: 199 EMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRYGNVLDVDRWINEMMERGFVVDNA 258
           E+GL+EYA N+FDEMS RG+ P+S +YK +++G  R G + + DRW+  M++RGF+ DNA
Sbjct: 194 ELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNA 253

Query: 259 TLTLIINAFCKKGFVSRAFWLFHKVKKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEM 318
           T TLI+ A C+ G V+RA W F K+  +G  PNLIN++S+I GLCK+GS+KQAFE+LEEM
Sbjct: 254 TCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEM 313

Query: 319 VRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDIYKPNVYTYTAMISGYCKEEK 378
           VRNGWKPNVYTHT+LIDGLCK+GWT++AFRLFLKLVRSD YKPNV+TYT+MI GYCKE+K
Sbjct: 314 VRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDK 373

Query: 379 LNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAYELMEFMCNEGFFPNICTYNA 438
           LNRAEMLF RMKEQG+ PN NTYTTLI+GHCKAG+F RAYELM  M +EGF PNI TYNA
Sbjct: 374 LNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNA 433

Query: 439 MVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQCKHADLNRALMFLTKMLKVG 498
            +D LCKK R  EA++LLNK     +EAD VTY ILI EQCK  D+N+AL F  +M K G
Sbjct: 434 AIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTG 493

Query: 499 FQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTKETYTSMICGYCRERKIGLAV 558
           F+ D+ L   LI+AFCRQK M +SE+LF  VV LG +PTKETYTSMI  YC+E  I LA+
Sbjct: 494 FEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLAL 553

Query: 559 KFFQRMSDHGCAPDSISYGALISGLCKESRLDEARRLYDVMIDNGLTPCEVTRVTLAYEY 618
           K+F  M  HGC PDS +YG+LISGLCK+S +DEA +LY+ MID GL+P EVTRVTLAYEY
Sbjct: 554 KYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEY 613

Query: 619 CKTEEFASAMVILERLDKKLWIHTVHTLIRKLCSEKKVGMAALFFHKLLDKEVNVDRVSL 678
           CK  + A+AM++LE LDKKLWI TV TL+RKLCSEKKVG+AALFF KLL+K+ + DRV+L
Sbjct: 614 CKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTL 673

Query: 679 AAFMTACCESNKYALVSDLTERISK 704
           AAF TAC ES K  LV+DLTERIS+
Sbjct: 674 AAFTTACSESGKNNLVTDLTERISR 698

[Close]

BLAST of CmaCh18G005600 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 284.3 bits (726), Expect = 2.9e-76
Identity = 144/430 (33.49%), Postives = 246/430 (57.21%), Query Frame = 0


Query: 203 LEYAGNMFDEMSARGMAPNSCTYKSIIVGYCRYGNVLDVDRWINEMMERGFVVDNATLTL 262
           + +A N+F EM    ++PN  TY  +I G+C  GN+       ++M  +G + +  T   
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245

Query: 263 IINAFCKKGFVSRAFWLFHKVKKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNG 322
           +I+ +CK   +   F L   +   GL PNLI+Y+ +I+GLC+ G +K+   +L EM R G
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305

Query: 323 WKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDIYKPNVYTYTAMISGYCKEEKLNRA 382
           +  +  T+ +LI G CK+G   +A  +  +++R  +  P+V TYT++I   CK   +NRA
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL-TPSVITYTSLIHSMCKAGNMNRA 365

Query: 383 EMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAYELMEFMCNEGFFPNICTYNAMVDG 442
               ++M+ +G+ PN  TYTTL+DG  + G  + AY ++  M + GF P++ TYNA+++G
Sbjct: 366 MEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 425

Query: 443 LCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQCKHADLNRALMFLTKMLKVGFQPD 502
            C  G++E+A  +L       +  D V+Y+ ++S  C+  D++ AL    +M++ G +PD
Sbjct: 426 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 485

Query: 503 VHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTKETYTSMICGYCRERKIGLAVKFFQ 562
              Y++LI  FC Q+   ++  L++E++++G  P + TYT++I  YC E  +  A++   
Sbjct: 486 TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHN 545

Query: 563 RMSDHGCAPDSISYGALISGLCKESRLDEARRLYDVMIDNGLTPCEVTRVTLAYEYCKTE 622
            M + G  PD ++Y  LI+GL K+SR  EA+RL   +      P +VT  TL  E C   
Sbjct: 546 EMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL-IENCSNI 605

Query: 623 EFASAMVILE 633
           EF S + +++
Sbjct: 606 EFKSVVSLIK 613

[Close]

BLAST of CmaCh18G005600 vs. TAIR 10
Match: AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 278.1 bits (710), Expect = 2.0e-74
Identity = 171/595 (28.74%), Postives = 298/595 (50.08%), Query Frame = 0


Query: 115 ALSFFYWAIRFPKFRYFMRLYIVCTMLLVEKCKQERADEVVECMIGVFAEIGKLKEAVDM 174
           AL+F +W  + P++++ +  Y     LL+         ++   MI     +G     +D+
Sbjct: 106 ALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDL 165

Query: 175 IIDM-RNQGLVLTTRVM----NRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSII 234
              M +++   L  +++    N ++   A  GL++    ++ EM    + PN  TY  ++
Sbjct: 166 CRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMV 225

Query: 235 VGYCRYGNVLDVDRWINEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKMGLS 294
            GYC+ GNV + ++++++++E G   D  T T +I  +C++  +  AF +F+++   G  
Sbjct: 226 NGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCR 285

Query: 295 PNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRL 354
            N + Y+ +I GLC    + +A +L  +M  +   P V T+T LI  LC       A  L
Sbjct: 286 RNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNL 345

Query: 355 FLKLVRSDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHC 414
             ++  + I KPN++TYT +I   C + K  +A  L  +M E+G++PN  TY  LI+G+C
Sbjct: 346 VKEMEETGI-KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 405

Query: 415 KAGNFSRAYELMEFMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKLLNKGCRNRVEADAV 474
           K G    A +++E M +    PN  TYN ++ G C K  V +A  +LNK    +V  D V
Sbjct: 406 KRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVV 465

Query: 475 TYNILISEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEV 534
           TYN LI  QC+  + + A   L+ M   G  PD   YT++I + C+ K + ++  LFD +
Sbjct: 466 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 525

Query: 535 VKLGFVPTKETYTSMICGYCRERKIGLAVKFFQRMSDHGCAPDSISYGALISGLCKESRL 594
            + G  P    YT++I GYC+  K+  A    ++M    C P+S+++ ALI GLC + +L
Sbjct: 526 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 585

Query: 595 DEARRLYDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERL---DKKLWIHTVHTL 654
            EA  L + M+  GL P   T   L +   K  +F  A    +++     K   HT  T 
Sbjct: 586 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 645

Query: 655 IRKLCSEKKVGMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERI 702
           I+  C E ++  A     K+ +  V+ D  + ++ +    +  +     D+ +R+
Sbjct: 646 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698

[Close]

BLAST of CmaCh18G005600 vs. TAIR 10
Match: AT4G11690.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 268.5 bits (685), Expect = 1.6e-71
Identity = 147/451 (32.59%), Postives = 237/451 (52.55%), Query Frame = 0


Query: 156 ECMIGVFAEIGKLKEAVDMIIDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSA 215
           E +I  + +   L  ++    +M + G V  +   N ++             + F+E  +
Sbjct: 98  EVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKS 157

Query: 216 RGMAPNSCTYKSIIVGYCRYGNVLDVDRWINEMMERGFVVDNATLTLIINAFCKKGFVSR 275
           + +  +  ++  +I G C  G +      + E+ E GF  +    T +I+  CKKG + +
Sbjct: 158 K-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 217

Query: 276 AFWLFHKVKKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLID 335
           A  LF ++ K+GL  N   Y+ +I+GL K G  KQ FE+ E+M  +G  PN+YT+  +++
Sbjct: 218 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 277

Query: 336 GLCKKGWTDRAFRLFLKLVRSDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMV 395
            LCK G T  AF++F ++ R      N+ TY  +I G C+E KLN A  + ++MK  G+ 
Sbjct: 278 QLCKDGRTKDAFQVFDEM-RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 337

Query: 396 PNTNTYTTLIDGHCKAGNFSRAYELMEFMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKL 455
           PN  TY TLIDG C  G   +A  L   + + G  P++ TYN +V G C+KG    A K+
Sbjct: 338 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 397

Query: 456 LNKGCRNRVEADAVTYNILISEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCR 515
           + +     ++   VTY ILI    +  ++ +A+     M ++G  PDVH Y+ LI  FC 
Sbjct: 398 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 457

Query: 516 QKMMNDSEKLFDEVVKLGFVPTKETYTSMICGYCRERKIGLAVKFFQRMSDHGCAPDSIS 575
           +  MN++ +LF  +V+    P +  Y +MI GYC+E     A+K  + M +   AP+  S
Sbjct: 458 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 517

Query: 576 YGALISGLCKESRLDEARRLYDVMIDNGLTP 607
           Y  +I  LCKE +  EA RL + MID+G+ P
Sbjct: 518 YRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546

[Close]

BLAST of CmaCh18G005600 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 265.0 bits (676), Expect = 1.8e-70
Identity = 143/471 (30.36%), Postives = 241/471 (51.17%), Query Frame = 0


Query: 167 KLKEAVDMIIDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYK 226
           K   A+ +  +    G+       N +I    ++G ++ A ++   M  +G  P+  +Y 
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285

Query: 227 SIIVGYCRYGNVLDVDRWINEMMERGFVVDNATLTLIINAFCKKGFVSRAFWLFHKVKKM 286
           +++ GYCR+G +  V + I  M  +G   ++     II   C+   ++ A   F ++ + 
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345

Query: 287 GLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRA 346
           G+ P+ + Y+++I G CKRG ++ A +   EM      P+V T+T++I G C+ G    A
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405

Query: 347 FRLFLKLVRSDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLID 406
            +LF ++    + +P+  T+T +I+GYCK   +  A  +   M + G  PN  TYTTLID
Sbjct: 406 GKLFHEMFCKGL-EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 465

Query: 407 GHCKAGNFSRAYELMEFMCNEGFFPNICTYNAMVDGLCKKGRVEEAFKLLNKGCRNRVEA 466
           G CK G+   A EL+  M   G  PNI TYN++V+GLCK G +EEA KL+ +     + A
Sbjct: 466 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 525

Query: 467 DAVTYNILISEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLF 526
           D VTY  L+   CK  ++++A   L +ML  G QP +  +  L++ FC   M+ D EKL 
Sbjct: 526 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 585

Query: 527 DEVVKLGFVPTKETYTSMICGYCRERKIGLAVKFFQRMSDHGCAPDSISYGALISGLCKE 586
           + ++  G  P   T+ S++  YC    +  A   ++ M   G  PD  +Y  L+ G CK 
Sbjct: 586 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 645

Query: 587 SRLDEARRLYDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKK 638
             + EA  L+  M   G +    T   L   + K ++F  A  + +++ ++
Sbjct: 646 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695

The following BLAST results are available for this feature:

BLAST of CmaCh18G005600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C8Q3	6.1e-249	61.75	Pentatricopeptide repeat-containing protein At4g19890 OS=Arabidopsis thaliana OX...	[more]
Q9FIX3	4.0e-75	33.49	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q9LSL9	2.9e-73	28.74	Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX...	[more]
Q9T0D6	2.3e-70	32.59	Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana OX...	[more]
Q0WVK7	2.5e-69	30.36	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]

BLAST of CmaCh18G005600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K602	0.0e+00	100.00	pentatricopeptide repeat-containing protein At4g19890 OS=Cucurbita maxima OX=366...	[more]
A0A6J1GR66	0.0e+00	97.18	pentatricopeptide repeat-containing protein At4g19890 OS=Cucurbita moschata OX=3...	[more]
A0A0A0LYL9	0.0e+00	83.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701980 PE=4 SV=1	[more]
A0A5A7TNN8	0.0e+00	84.45	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CAH0	0.0e+00	84.45	pentatricopeptide repeat-containing protein At4g19890 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of CmaCh18G005600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022994748.1	0.0e+00	100.00	pentatricopeptide repeat-containing protein At4g19890 [Cucurbita maxima]	[more]
XP_022954541.1	0.0e+00	97.18	pentatricopeptide repeat-containing protein At4g19890 [Cucurbita moschata]	[more]
XP_023541359.1	0.0e+00	97.17	pentatricopeptide repeat-containing protein At4g19890 [Cucurbita pepo subsp. pep...	[more]
KAG6573462.1	0.0e+00	96.35	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_038895547.1	0.0e+00	85.51	pentatricopeptide repeat-containing protein At4g19890 isoform X2 [Benincasa hisp...	[more]

BLAST of CmaCh18G005600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19890.1	4.3e-250	61.75	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G39710.1	2.9e-76	33.49	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G65560.1	2.0e-74	28.74	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G11690.1	1.6e-71	32.59	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G05670.1	1.8e-70	30.36	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 498..528 e-value: 5.9E-8 score: 32.3
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 434..458 e-value: 5.0E-7 score: 27.5 coord: 574..606 e-value: 8.7E-8 score: 29.9 coord: 223..256 e-value: 7.1E-7 score: 27.0 coord: 469..503 e-value: 6.3E-5 score: 20.9 coord: 259..291 e-value: 0.0027 score: 15.8 coord: 328..362 e-value: 6.0E-6 score: 24.1 coord: 364..398 e-value: 5.5E-11 score: 39.9 coord: 540..573 e-value: 4.0E-10 score: 37.2 coord: 400..433 e-value: 6.1E-9 score: 33.5 coord: 295..327 e-value: 5.2E-10 score: 36.9 coord: 505..537 e-value: 2.1E-7 score: 28.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 157..183 e-value: 0.15 score: 12.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 431..480 e-value: 3.3E-15 score: 56.0 coord: 361..410 e-value: 1.5E-18 score: 66.7 coord: 540..585 e-value: 1.7E-13 score: 50.6 coord: 223..269 e-value: 1.4E-7 score: 31.6 coord: 290..339 e-value: 1.6E-17 score: 63.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 256..290 score: 11.070971
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 221..255 score: 10.172144
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 326..360 score: 10.215989
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 397..431 score: 12.265752
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 467..501 score: 11.070971
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 432..466 score: 11.070971
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 537..571 score: 12.24383
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 362..396 score: 13.986676
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 502..536 score: 12.101333
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 572..606 score: 13.230347
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 291..325 score: 13.339959
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 427..520 e-value: 1.7E-26 score: 94.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 521..639 e-value: 2.2E-30 score: 108.1 coord: 247..355 e-value: 2.8E-33 score: 117.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 87..246 e-value: 2.9E-14 score: 55.0 coord: 356..426 e-value: 1.5E-23 score: 85.3
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 42..691
None	No IPR available	PANTHER	PTHR47942:SF30	OS11G0607100 PROTEIN	coord: 42..691
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 338..568

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G005600.1	CmaCh18G005600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005515	protein binding