CmaCh18G005580 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGAGATTTCGGGGATTACTATGTTGGTTTGAGAGGCTGAAGCTGCCAGCATGATCTGAAGGAAATGGGTGTTAAGGGTTCAGATCATCTTGCAGCTTCAATCACTCATTCACCAACAAATTCATCAGCTTAGGGTTTTCATTTACAACACTTTCTTCATTTCAGGTACACATCATGTTCTATTCATTCCCATTTATAAACCTAATTCTATACATTCATTCTTTGTTTATACTTTATATGAGATCTCACGTCGGTTGGAGAGGAAAACGAAGCATTGGTGTGGAAATCTCTCTTTAGCAGACACGTTTTAAAAACTTTGAGAAAAACTCGAAAAAGAAAGTCCAAAGAAGACAACATATATGCTGCTAGTGGTGGATTTGAGTTATTACGGTTTATTCGGTAGGTGGGTCTAAAGTGATTATTGGTGGATTCAAATGTATATTTGAGAAGGTAGTTAAGCTATTTGTTTCGATGGATGATTTCCAGCCTAATCTTGCTTCTTTGCTACTAAATCCTTTAAGATGTATGAACCTGAATCTAAACCTGAACCCATGTTTTAATAGTCCTTCAATAGTTTTCACGTCTTTGGATAAAGCGTGAGACGTATGAAATTGAAGTCAATATCGTACATAAACCTTTCGAGCTTATTTGATACTAAATTCAAGTTTAAGACGTCAGAAACTAAACTCGTGCTTCAATTTCTAATTTTCATGTTTGGAAATCTATATAAATCATTTGTTAATTCTATCCAATTTCATTGGTACTAAATTAAAGTTTAAAATTACTAAGTTTGAACTCGTTCTTGCTTGAATTACTCTGAAATAGTTTCCACATCTCTTAAACAAATGCTGGGAATAAGTTTCATATTGATTGTAGAGGAGAACAAATCATTCCTTATAAGAGTGGAAACTTCCATCAGACACGTTAAAAAACCTTGAGGGGAAGCCCTAAAGAGAAATCCTTGTGAGGACAATATCAACTAGTGGTAGGCTTAGACTGTTACACAATATAATCCTCCTTACCTCTCCCGTGCTTATTTGACATTAGATTCATGTTTAAGATGTTTGAACCTGAACCCGTTCTTCAATTACTCTTGATTAGCTTTTACATCTAACGAAAAAATACGAGATATATGAAATGGAAGTCAATGCGGTCTTTTCTCTCTATAGAAGTTGTTTTCACACAATTACACCATGCATGTCTGGTCTCAATTGTCTCAGCTTTGTAGTAGCAACCACACTCCACAAATCAAATTAGCTCGTAAATTCTAAACCTTTAGGCTTATAAGGTCCGTCTAAATTATGTTTGAATACGATTTGAATTTTGTGTCGTAAAAGTCATGTCTTATCCTCGATAAACACATCGGTTTAGAAACTAAACTTGTAATCTAAGTTTATTGTTTTATATTTTTTAAAAAAAATGAAAAGAGAAACCATATTAATTAATTAAGATATATCTCTTTGATACTTTGTATTTGGACAATTTATTTTTATTAATTGTATTTCACATGTCAAATAAAGTTGAAGAATTTAAAATGTCGAGATGAGATGTCAGTGTCGGAGTCGATGCCAACATCGATATCAATATTGATAGATGTCTATATTTCCAAATTTAAATTTGTTGTTCTCTACGTGTTTTAATTTAAAAATCCAAATTAAAAAATTTCGAGATTTTAAATTTTCTCACACTCGAACAAAGCTAAAAAATACAAACCCGATCATTGAAACTTTGGCTTGATAAATGTATCAAATCGTCTTTAATATTTTAGTTAATTTTTAAATGGATTAATAGTTTTTTAAAATTTTTAATTCTAATTTCAATTGCTTAAAATATAAAATTAATATTTAAAATATTAATAGCTAATTTATAAATAAATAAAAATAGGGGTAATTTAGGAAATTTGTGGCCATATTTTATTTTTCCTGAAAAGGAGGGCTCATTTTATACCCTAACTAATTTTGCAGAACCCTTTTCTCTTCCCTCTCAAATGGTGTGGGGCCCTACAAAGGGAAATAGAGATGGTACCAACCGGCAAAGCTCCGATCGGCGGTGACGGCGGCTGCGAGCGGCTGGAGCAGGCTCTCCGAGATTGCCACAAGCGACTACCAGAAGGTCCGGCGCGGCGGTCGGGCTGCTGGCATCTGAACCGATCTTTTGCAGAGTGCTTGGTGGCGACGGTGTGCCCTAACGAGGCGGAGGCGGTGCGAACTCTCTGCTCCAGCGGCGGAACCGCTCTGAAGAGATCGCAATGCGAGCAAGCTAAGTTTTCGTTCTCTTTATGTCTCTCTTCTCTCCAATTGTGAAATCATCCTAGATCCCTGAATTGAACGCCGTGGGAGATTGAAACGGGAATCGACGAAGCTTTTTGAATTGAGATTTTGTAGATCGTAATAATGTTCTTTTGATGTTCATAATAATGTAATTGACGTAATTATAGATGTAAATCGATCAGAAGTTGAGTTGTTGCTGCAATTCGACGCTAACTTACAAATTTGGTTACATGATTTTCAGAAAATTAAAATTTGTTCTTGATTTCTGGGTTACAATTAGTCCCATAGGTTTTATCCATCCATATAAGATTATTATGAAATTTATTGACAAGGAACTATATTTATT ATGTTTGAGATTTCGGGGATTACTATCTTCAATCACTCATTCACCAACAAATTCATCAGCTTAGGGTTTTCATTTACAACACTTTCTTCATTTCAGAACCCTTTTCTCTTCCCTCTCAAATGGTGTGGGGCCCTACAAAGGGAAATAGAGATGGTACCAACCGGCAAAGCTCCGATCGGCGGTGACGGCGGCTGCGAGCGGCTGGAGCAGGCTCTCCGAGATTGCCACAAGCGACTACCAGAAGGTCCGGCGCGGCGGTCGGGCTGCTGGCATCTGAACCGATCTTTTGCAGAGTGCTTGGTGGCGACGGTGTGCCCTAACGAGGCGGAGGCGGTGCGAACTCTCTGCTCCAGCGGCGGAACCGCTCTGAAGAGATCGCAATGCGAGCAAGCTAAGTTTTCGTTCTCTTTATGTCTCTCTTCTCTCCAATTGTGAAATCATCCTAGATCCCTGAATTGAACGCCGTGGGAGATTGAAACGGGAATCGACGAAGCTTTTTGAATTGAGATTTTGTAGATCGTAATAATGTTCTTTTGATGTTCATAATAATGTAATTGACGTAATTATAGATGTAAATCGATCAGAAGTTGAGTTGTTGCTGCAATTCGACGCTAACTTACAAATTTGGTTACATGATTTTCAGAAAATTAAAATTTGTTCTTGATTTCTGGGTTACAATTAGTCCCATAGGTTTTATCCATCCATATAAGATTATTATGAAATTTATTGACAAGGAACTATATTTATT ATGTTTGAGATTTCGGGGATTACTATCTTCAATCACTCATTCACCAACAAATTCATCAGCTTAGGGTTTTCATTTACAACACTTTCTTCATTTCAGAACCCTTTTCTCTTCCCTCTCAAATGGTGTGGGGCCCTACAAAGGGAAATAGAGATGGTACCAACCGGCAAAGCTCCGATCGGCGGTGACGGCGGCTGCGAGCGGCTGGAGCAGGCTCTCCGAGATTGCCACAAGCGACTACCAGAAGGTCCGGCGCGGCGGTCGGGCTGCTGGCATCTGAACCGATCTTTTGCAGAGTGCTTGGTGGCGACGGTGTGCCCTAACGAGGCGGAGGCGGTGCGAACTCTCTGCTCCAGCGGCGGAACCGCTCTGAAGAGATCGCAATGCGAGCAAGCTAAGTTTTCGTTCTCTTTATGTCTCTCTTCTCTCCAATTGTGA MFEISGITIFNHSFTNKFISLGFSFTTLSSFQNPFLFPLKWCGALQREIEMVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQL Homology
BLAST of CmaCh18G005580 vs. ExPASy TrEMBL
Match: A0A6J1K2P5 (uncharacterized protein LOC111490507 OS=Cucurbita maxima OX=3661 GN=LOC111490507 PE=4 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 1.2e-47 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of CmaCh18G005580 vs. ExPASy TrEMBL
Match: A0A6J1GSM0 (uncharacterized protein LOC111457119 OS=Cucurbita moschata OX=3662 GN=LOC111457119 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 2.7e-47 Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of CmaCh18G005580 vs. ExPASy TrEMBL
Match: A0A0A0LYC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G702000 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 1.0e-38 Identity = 78/93 (83.87%), Postives = 86/93 (92.47%), Query Frame = 0
BLAST of CmaCh18G005580 vs. ExPASy TrEMBL
Match: A0A6J1CN74 (uncharacterized protein LOC111012670 OS=Momordica charantia OX=3673 GN=LOC111012670 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 3.4e-37 Identity = 79/96 (82.29%), Postives = 86/96 (89.58%), Query Frame = 0
BLAST of CmaCh18G005580 vs. ExPASy TrEMBL
Match: A0A5D3CLT3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00190 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 1.3e-36 Identity = 76/93 (81.72%), Postives = 83/93 (89.25%), Query Frame = 0
BLAST of CmaCh18G005580 vs. NCBI nr
Match: XP_022994930.1 (uncharacterized protein LOC111490507 [Cucurbita maxima]) HSP 1 Score: 199.1 bits (505), Expect = 2.5e-47 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of CmaCh18G005580 vs. NCBI nr
Match: XP_022955041.1 (uncharacterized protein LOC111457119 [Cucurbita moschata]) HSP 1 Score: 198.0 bits (502), Expect = 5.7e-47 Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of CmaCh18G005580 vs. NCBI nr
Match: KAG6573459.1 (hypothetical protein SDJN03_27346, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012607.1 hypothetical protein SDJN02_25359, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 196.4 bits (498), Expect = 1.6e-46 Identity = 92/94 (97.87%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of CmaCh18G005580 vs. NCBI nr
Match: XP_023542217.1 (uncharacterized protein LOC111802182 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 194.1 bits (492), Expect = 8.2e-46 Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0
BLAST of CmaCh18G005580 vs. NCBI nr
Match: XP_038893663.1 (uncharacterized protein LOC120082530 [Benincasa hispida]) HSP 1 Score: 170.6 bits (431), Expect = 9.7e-39 Identity = 82/94 (87.23%), Postives = 85/94 (90.43%), Query Frame = 0
BLAST of CmaCh18G005580 vs. TAIR 10
Match: AT1G31175.1 (unknown protein; Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 131.3 bits (329), Expect = 6.1e-31 Identity = 62/99 (62.63%), Postives = 75/99 (75.76%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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