Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAACAAAATCTGGCAGGCCGCAGCCAAGGGTTTCAATGGAGAACACACAAGAAAAACAGGAGGAAAATGTAGAAAGTTGTGTGGAGGAGTCCGTTGTTGAGAGCCGGAAGAATGACCGGAAAGGAAAACGTATTGTCGAAGAGAAGTCGGAGAGGCTGAAGAAGGTCGAGGATAAGAGAGCAAAATGCTGCGTTGGGAATGCTATTTCACTCGCACTAAGAAGCTATTTGAAATTAAAGGACGTGGATATAAAAATTGAAGAAGGAATCAAATACATGCTGGAAAGAAAGCACAAAGAAGCAGCGCCAATCACACAAGGCTTTTCGTCAATTGAAACTGAGCTTAATTGTTTGGACGGAATTACAGGTAATCCATCGGTAACGACTGTGAATAATCAATATACATAGAATTTGCTTATACCGTAACATTTGATGTATGTTATGTTATATAGAAACAACAAAGCCGGAAAGGGAAAAGAATCTGCTGCTAATCCTAAAGAGATTTCAGTCACCAGATGGTAGCCATTCCATCATACTTGTGTCTGGTAAGGTTTCAGTATACTAAATTAAAATACTATATATATATAAATACTGCTTTGATTGATTCTCGTTATGGTTTACAGGTAGATTGAGATTGAAGATTCTCTCTACAGATTATTTTTGTCTACTACGAGGGGGAAAAAAAGAAAATACTCAATGAGGAACACTAAGGATTAACTATATTCAACAAACAAATTTGATTGATTAATGTATGAAAAATTTGCAGTATGTTTGAGAAAACATTTGGTAGAGCAGGAGGATGAATATGGTGGCATATTGCAAGGGAAATGCTCAAAAAGTAAAGAGGATGTATTAAGAAAGTTAGGTACTTAGTTACTACTTCAGTATTTATGGATGCATAATTTGGTTAATTATTTGATGATTGTAACTAATTAATACAATTTGCACTTGATACAAGAAGAGAGTTGGAGCATGCAGAAAAAGTATGTTTAATCTCACGAAGGCGAAGGGGAAAGCTTCTCTCTCAGTCATCATCTGGGGTGGATGATGTAATTCCCAAGTACTCCGATGAAGATTTCCTAACAGTTATGAGTAAGTGA
mRNA sequence
ATGAGAACAAAATCTGGCAGGCCGCAGCCAAGGGTTTCAATGGAGAACACACAAGAAAAACAGGAGGAAAATGTAGAAAGTTGTGTGGAGGAGTCCGTTGTTGAGAGCCGGAAGAATGACCGGAAAGGAAAACGTATTGTCGAAGAGAAGTCGGAGAGGCTGAAGAAGGTCGAGGATAAGAGAGCAAAATGCTGCGTTGGGAATGCTATTTCACTCGCACTAAGAAGCTATTTGAAATTAAAGGACGTGGATATAAAAATTGAAGAAGGAATCAAATACATGCTGGAAAGAAAGCACAAAGAAGCAGCGCCAATCACACAAGGCTTTTCGTCAATTGAAACTGAGCTTAATTGTTTGGACGGAATTACAGAAACAACAAAGCCGGAAAGGGAAAAGAATCTGCTGCTAATCCTAAAGAGATTTCAGTCACCAGATGGTAGCCATTCCATCATACTTGTGTCTGTATGTTTGAGAAAACATTTGGTAGAGCAGGAGGATGAATATGGTGGCATATTGCAAGGGAAATGCTCAAAAAGTAAAGAGGATGTATTAAGAAAGCGAAGGGGAAAGCTTCTCTCTCAGTCATCATCTGGGGTGGATGATGTAATTCCCAAGTACTCCGATGAAGATTTCCTAACAGTTATGAGTAAGTGA
Coding sequence (CDS)
ATGAGAACAAAATCTGGCAGGCCGCAGCCAAGGGTTTCAATGGAGAACACACAAGAAAAACAGGAGGAAAATGTAGAAAGTTGTGTGGAGGAGTCCGTTGTTGAGAGCCGGAAGAATGACCGGAAAGGAAAACGTATTGTCGAAGAGAAGTCGGAGAGGCTGAAGAAGGTCGAGGATAAGAGAGCAAAATGCTGCGTTGGGAATGCTATTTCACTCGCACTAAGAAGCTATTTGAAATTAAAGGACGTGGATATAAAAATTGAAGAAGGAATCAAATACATGCTGGAAAGAAAGCACAAAGAAGCAGCGCCAATCACACAAGGCTTTTCGTCAATTGAAACTGAGCTTAATTGTTTGGACGGAATTACAGAAACAACAAAGCCGGAAAGGGAAAAGAATCTGCTGCTAATCCTAAAGAGATTTCAGTCACCAGATGGTAGCCATTCCATCATACTTGTGTCTGTATGTTTGAGAAAACATTTGGTAGAGCAGGAGGATGAATATGGTGGCATATTGCAAGGGAAATGCTCAAAAAGTAAAGAGGATGTATTAAGAAAGCGAAGGGGAAAGCTTCTCTCTCAGTCATCATCTGGGGTGGATGATGTAATTCCCAAGTACTCCGATGAAGATTTCCTAACAGTTATGAGTAAGTGA
Protein sequence
MRTKSGRPQPRVSMENTQEKQEENVESCVEESVVESRKNDRKGKRIVEEKSERLKKVEDKRAKCCVGNAISLALRSYLKLKDVDIKIEEGIKYMLERKHKEAAPITQGFSSIETELNCLDGITETTKPEREKNLLLILKRFQSPDGSHSIILVSVCLRKHLVEQEDEYGGILQGKCSKSKEDVLRKRRGKLLSQSSSGVDDVIPKYSDEDFLTVMSK
Homology
BLAST of CmaCh17G012770 vs. ExPASy TrEMBL
Match:
A0A6J1GQF8 (uncharacterized protein LOC111456533 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456533 PE=3 SV=1)
HSP 1 Score: 96.7 bits (239), Expect = 1.3e-16
Identity = 76/188 (40.43%), Postives = 92/188 (48.94%), Query Frame = 0
Query: 81 KDVDIKIEEGIKY---MLERKHKEAAPITQGFSSIETELNCLDGITETTKPEREKNLLLI 140
K V+ K E I Y + ERK+ EA PI Q SSIET L+CLDG E K + E++LL
Sbjct: 85 KPVEAKEIEEINYWENIAERKYTEAEPILQILSSIETRLSCLDGFIEIKKLKMERSLLFR 144
Query: 141 L--KRFQSPDGSHSIILVS------------------------------VCLRKHLVEQE 200
L ++F S +V + LRK L+EQE
Sbjct: 145 LNPEKFSSYGRYEITFMVGRLRLRDLSTDYFWLLQGGVERSCIDMMEKLLRLRKQLIEQE 204
Query: 201 DEYGGILQGKCSKSKEDVLRK------------------RRGKLLSQSSSGVDDVIPKYS 216
DEYG IL+GK K+KEDVLR+ RR L SQSSS VDDVI K S
Sbjct: 205 DEYGDILKGKSLKNKEDVLRELVNTRRELEHAEKVYLISRRRNLRSQSSSEVDDVISKQS 264
BLAST of CmaCh17G012770 vs. ExPASy TrEMBL
Match:
A0A6J1GQA4 (uncharacterized protein LOC111456533 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456533 PE=3 SV=1)
HSP 1 Score: 96.7 bits (239), Expect = 1.3e-16
Identity = 76/188 (40.43%), Postives = 92/188 (48.94%), Query Frame = 0
Query: 81 KDVDIKIEEGIKY---MLERKHKEAAPITQGFSSIETELNCLDGITETTKPEREKNLLLI 140
K V+ K E I Y + ERK+ EA PI Q SSIET L+CLDG E K + E++LL
Sbjct: 85 KPVEAKEIEEINYWENIAERKYTEAEPILQILSSIETRLSCLDGFIEIKKLKMERSLLFR 144
Query: 141 L--KRFQSPDGSHSIILVS------------------------------VCLRKHLVEQE 200
L ++F S +V + LRK L+EQE
Sbjct: 145 LNPEKFSSYGRYEITFMVGRLRLRDLSTDYFWLLQGGVERSCIDMMEKLLRLRKQLIEQE 204
Query: 201 DEYGGILQGKCSKSKEDVLRK------------------RRGKLLSQSSSGVDDVIPKYS 216
DEYG IL+GK K+KEDVLR+ RR L SQSSS VDDVI K S
Sbjct: 205 DEYGDILKGKSLKNKEDVLRELVNTRRELEHAEKVYLISRRRNLRSQSSSEVDDVISKQS 264
BLAST of CmaCh17G012770 vs. ExPASy TrEMBL
Match:
A0A6J1GQF7 (uncharacterized protein LOC111456533 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111456533 PE=3 SV=1)
HSP 1 Score: 70.5 bits (171), Expect = 9.9e-09
Identity = 43/77 (55.84%), Postives = 48/77 (62.34%), Query Frame = 0
Query: 157 LRKHLVEQEDEYGGILQGKCSKSKEDVLRK------------------RRGKLLSQSSSG 216
LRK L+EQEDEYG IL+GK K+KEDVLR+ RR L SQSSS
Sbjct: 8 LRKQLIEQEDEYGDILKGKSLKNKEDVLRELVNTRRELEHAEKVYLISRRRNLRSQSSSE 67
BLAST of CmaCh17G012770 vs. NCBI nr
Match:
XP_023548929.1 (uncharacterized protein LOC111807430 [Cucurbita pepo subsp. pepo] >XP_023548930.1 uncharacterized protein LOC111807430 [Cucurbita pepo subsp. pepo] >XP_023548931.1 uncharacterized protein LOC111807430 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 256.1 bits (653), Expect = 2.6e-64
Identity = 135/152 (88.82%), Postives = 144/152 (94.74%), Query Frame = 0
Query: 14 MENTQEKQEENVESCVEESVVESRKNDRKGKRIVEEKSERLKKVEDKRAKCCVGNAISLA 73
M+ TQEKQEENVESCVEES+VESRKNDRKGKRIVEEK+ERLKKVEDKRAKCCVGNAISLA
Sbjct: 1 MDTTQEKQEENVESCVEESIVESRKNDRKGKRIVEEKAERLKKVEDKRAKCCVGNAISLA 60
Query: 74 LRSYLKLKDVDIKIEEGIKYMLERKHKEAAPITQGFSSIETELNCLDGITETTKPEREKN 133
LRSYLKLKDVDIKIEEGIKYM+ERKHKEAAPIT+GFSSIETELNCLDGITETTK EREKN
Sbjct: 61 LRSYLKLKDVDIKIEEGIKYMVERKHKEAAPITRGFSSIETELNCLDGITETTKLEREKN 120
Query: 134 LLLILKRFQSPDGSHSIILVSVCLRKHLVEQE 166
LLLILKRFQSPDGSHSIILV+ LR ++ +
Sbjct: 121 LLLILKRFQSPDGSHSIILVAGRLRLKILSTD 152
BLAST of CmaCh17G012770 vs. NCBI nr
Match:
XP_023548918.1 (uncharacterized protein LOC111807425 isoform X3 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 103.6 bits (257), Expect = 2.2e-18
Identity = 78/193 (40.41%), Postives = 102/193 (52.85%), Query Frame = 0
Query: 73 ALRSYLKLKDVDIKIEEGIKYMLERKHKEAAPITQGFSSIETELNCLDGITETTKPEREK 132
+LR ++ K+++ KI + + + ERK++EA PI Q SSIET L CLDGITE K + EK
Sbjct: 96 SLRKLVESKEIE-KINDW-ENIAERKYREAEPILQILSSIETRLTCLDGITEIKKLKMEK 155
Query: 133 NLLLIL--KRFQSPDGSHSIILVS------------------------------VCLRKH 192
+LL L K+F S + ++ + LRK
Sbjct: 156 SLLFRLNPKKFSSYRHYETTLMAGRLRLSDLSTDYFWLLQGGIERSCIDLIEKLLRLRKQ 215
Query: 193 LVEQEDEYGGILQGKCSKSKEDVLRK------------------RRGKLLSQSSSGVDDV 216
L+EQEDEYG IL+GK K+KEDVLR+ RR LSQSSS VDDV
Sbjct: 216 LIEQEDEYGDILKGKSLKNKEDVLRELVYTRRDLEHAEKVYLISRRRNPLSQSSSEVDDV 275
BLAST of CmaCh17G012770 vs. NCBI nr
Match:
XP_023548919.1 (uncharacterized protein LOC111807425 isoform X4 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 103.6 bits (257), Expect = 2.2e-18
Identity = 78/193 (40.41%), Postives = 102/193 (52.85%), Query Frame = 0
Query: 73 ALRSYLKLKDVDIKIEEGIKYMLERKHKEAAPITQGFSSIETELNCLDGITETTKPEREK 132
+LR ++ K+++ KI + + + ERK++EA PI Q SSIET L CLDGITE K + EK
Sbjct: 95 SLRKLVESKEIE-KINDW-ENIAERKYREAEPILQILSSIETRLTCLDGITEIKKLKMEK 154
Query: 133 NLLLIL--KRFQSPDGSHSIILVS------------------------------VCLRKH 192
+LL L K+F S + ++ + LRK
Sbjct: 155 SLLFRLNPKKFSSYRHYETTLMAGRLRLSDLSTDYFWLLQGGIERSCIDLIEKLLRLRKQ 214
Query: 193 LVEQEDEYGGILQGKCSKSKEDVLRK------------------RRGKLLSQSSSGVDDV 216
L+EQEDEYG IL+GK K+KEDVLR+ RR LSQSSS VDDV
Sbjct: 215 LIEQEDEYGDILKGKSLKNKEDVLRELVYTRRDLEHAEKVYLISRRRNPLSQSSSEVDDV 274
BLAST of CmaCh17G012770 vs. NCBI nr
Match:
XP_023548916.1 (uncharacterized protein LOC111807425 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023548917.1 uncharacterized protein LOC111807425 isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 103.6 bits (257), Expect = 2.2e-18
Identity = 78/193 (40.41%), Postives = 102/193 (52.85%), Query Frame = 0
Query: 73 ALRSYLKLKDVDIKIEEGIKYMLERKHKEAAPITQGFSSIETELNCLDGITETTKPEREK 132
+LR ++ K+++ KI + + + ERK++EA PI Q SSIET L CLDGITE K + EK
Sbjct: 101 SLRKLVESKEIE-KINDW-ENIAERKYREAEPILQILSSIETRLTCLDGITEIKKLKMEK 160
Query: 133 NLLLIL--KRFQSPDGSHSIILVS------------------------------VCLRKH 192
+LL L K+F S + ++ + LRK
Sbjct: 161 SLLFRLNPKKFSSYRHYETTLMAGRLRLSDLSTDYFWLLQGGIERSCIDLIEKLLRLRKQ 220
Query: 193 LVEQEDEYGGILQGKCSKSKEDVLRK------------------RRGKLLSQSSSGVDDV 216
L+EQEDEYG IL+GK K+KEDVLR+ RR LSQSSS VDDV
Sbjct: 221 LIEQEDEYGDILKGKSLKNKEDVLRELVYTRRDLEHAEKVYLISRRRNPLSQSSSEVDDV 280
BLAST of CmaCh17G012770 vs. NCBI nr
Match:
XP_023548920.1 (uncharacterized protein LOC111807425 isoform X5 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 103.6 bits (257), Expect = 2.2e-18
Identity = 78/193 (40.41%), Postives = 102/193 (52.85%), Query Frame = 0
Query: 73 ALRSYLKLKDVDIKIEEGIKYMLERKHKEAAPITQGFSSIETELNCLDGITETTKPEREK 132
+LR ++ K+++ KI + + + ERK++EA PI Q SSIET L CLDGITE K + EK
Sbjct: 63 SLRKLVESKEIE-KINDW-ENIAERKYREAEPILQILSSIETRLTCLDGITEIKKLKMEK 122
Query: 133 NLLLIL--KRFQSPDGSHSIILVS------------------------------VCLRKH 192
+LL L K+F S + ++ + LRK
Sbjct: 123 SLLFRLNPKKFSSYRHYETTLMAGRLRLSDLSTDYFWLLQGGIERSCIDLIEKLLRLRKQ 182
Query: 193 LVEQEDEYGGILQGKCSKSKEDVLRK------------------RRGKLLSQSSSGVDDV 216
L+EQEDEYG IL+GK K+KEDVLR+ RR LSQSSS VDDV
Sbjct: 183 LIEQEDEYGDILKGKSLKNKEDVLRELVYTRRDLEHAEKVYLISRRRNPLSQSSSEVDDV 242
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1GQF8 | 1.3e-16 | 40.43 | uncharacterized protein LOC111456533 isoform X2 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1GQA4 | 1.3e-16 | 40.43 | uncharacterized protein LOC111456533 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1GQF7 | 9.9e-09 | 55.84 | uncharacterized protein LOC111456533 isoform X3 OS=Cucurbita moschata OX=3662 GN... | [more] |
Match Name | E-value | Identity | Description | |
XP_023548929.1 | 2.6e-64 | 88.82 | uncharacterized protein LOC111807430 [Cucurbita pepo subsp. pepo] >XP_023548930.... | [more] |
XP_023548918.1 | 2.2e-18 | 40.41 | uncharacterized protein LOC111807425 isoform X3 [Cucurbita pepo subsp. pepo] | [more] |
XP_023548919.1 | 2.2e-18 | 40.41 | uncharacterized protein LOC111807425 isoform X4 [Cucurbita pepo subsp. pepo] | [more] |
XP_023548916.1 | 2.2e-18 | 40.41 | uncharacterized protein LOC111807425 isoform X1 [Cucurbita pepo subsp. pepo] >XP... | [more] |
XP_023548920.1 | 2.2e-18 | 40.41 | uncharacterized protein LOC111807425 isoform X5 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |