CmaCh17G012770 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G012770
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr17: 8646054 .. 8647156 (-)
RNA-Seq Expression	CmaCh17G012770
Synteny	CmaCh17G012770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAACAAAATCTGGCAGGCCGCAGCCAAGGGTTTCAATGGAGAACACACAAGAAAAACAGGAGGAAAATGTAGAAAGTTGTGTGGAGGAGTCCGTTGTTGAGAGCCGGAAGAATGACCGGAAAGGAAAACGTATTGTCGAAGAGAAGTCGGAGAGGCTGAAGAAGGTCGAGGATAAGAGAGCAAAATGCTGCGTTGGGAATGCTATTTCACTCGCACTAAGAAGCTATTTGAAATTAAAGGACGTGGATATAAAAATTGAAGAAGGAATCAAATACATGCTGGAAAGAAAGCACAAAGAAGCAGCGCCAATCACACAAGGCTTTTCGTCAATTGAAACTGAGCTTAATTGTTTGGACGGAATTACAGGTAATCCATCGGTAACGACTGTGAATAATCAATATACATAGAATTTGCTTATACCGTAACATTTGATGTATGTTATGTTATATAGAAACAACAAAGCCGGAAAGGGAAAAGAATCTGCTGCTAATCCTAAAGAGATTTCAGTCACCAGATGGTAGCCATTCCATCATACTTGTGTCTGGTAAGGTTTCAGTATACTAAATTAAAATACTATATATATATAAATACTGCTTTGATTGATTCTCGTTATGGTTTACAGGTAGATTGAGATTGAAGATTCTCTCTACAGATTATTTTTGTCTACTACGAGGGGGAAAAAAAGAAAATACTCAATGAGGAACACTAAGGATTAACTATATTCAACAAACAAATTTGATTGATTAATGTATGAAAAATTTGCAGTATGTTTGAGAAAACATTTGGTAGAGCAGGAGGATGAATATGGTGGCATATTGCAAGGGAAATGCTCAAAAAGTAAAGAGGATGTATTAAGAAAGTTAGGTACTTAGTTACTACTTCAGTATTTATGGATGCATAATTTGGTTAATTATTTGATGATTGTAACTAATTAATACAATTTGCACTTGATACAAGAAGAGAGTTGGAGCATGCAGAAAAAGTATGTTTAATCTCACGAAGGCGAAGGGGAAAGCTTCTCTCTCAGTCATCATCTGGGGTGGATGATGTAATTCCCAAGTACTCCGATGAAGATTTCCTAACAGTTATGAGTAAGTGA

mRNA sequence

ATGAGAACAAAATCTGGCAGGCCGCAGCCAAGGGTTTCAATGGAGAACACACAAGAAAAACAGGAGGAAAATGTAGAAAGTTGTGTGGAGGAGTCCGTTGTTGAGAGCCGGAAGAATGACCGGAAAGGAAAACGTATTGTCGAAGAGAAGTCGGAGAGGCTGAAGAAGGTCGAGGATAAGAGAGCAAAATGCTGCGTTGGGAATGCTATTTCACTCGCACTAAGAAGCTATTTGAAATTAAAGGACGTGGATATAAAAATTGAAGAAGGAATCAAATACATGCTGGAAAGAAAGCACAAAGAAGCAGCGCCAATCACACAAGGCTTTTCGTCAATTGAAACTGAGCTTAATTGTTTGGACGGAATTACAGAAACAACAAAGCCGGAAAGGGAAAAGAATCTGCTGCTAATCCTAAAGAGATTTCAGTCACCAGATGGTAGCCATTCCATCATACTTGTGTCTGTATGTTTGAGAAAACATTTGGTAGAGCAGGAGGATGAATATGGTGGCATATTGCAAGGGAAATGCTCAAAAAGTAAAGAGGATGTATTAAGAAAGCGAAGGGGAAAGCTTCTCTCTCAGTCATCATCTGGGGTGGATGATGTAATTCCCAAGTACTCCGATGAAGATTTCCTAACAGTTATGAGTAAGTGA

Coding sequence (CDS)

ATGAGAACAAAATCTGGCAGGCCGCAGCCAAGGGTTTCAATGGAGAACACACAAGAAAAACAGGAGGAAAATGTAGAAAGTTGTGTGGAGGAGTCCGTTGTTGAGAGCCGGAAGAATGACCGGAAAGGAAAACGTATTGTCGAAGAGAAGTCGGAGAGGCTGAAGAAGGTCGAGGATAAGAGAGCAAAATGCTGCGTTGGGAATGCTATTTCACTCGCACTAAGAAGCTATTTGAAATTAAAGGACGTGGATATAAAAATTGAAGAAGGAATCAAATACATGCTGGAAAGAAAGCACAAAGAAGCAGCGCCAATCACACAAGGCTTTTCGTCAATTGAAACTGAGCTTAATTGTTTGGACGGAATTACAGAAACAACAAAGCCGGAAAGGGAAAAGAATCTGCTGCTAATCCTAAAGAGATTTCAGTCACCAGATGGTAGCCATTCCATCATACTTGTGTCTGTATGTTTGAGAAAACATTTGGTAGAGCAGGAGGATGAATATGGTGGCATATTGCAAGGGAAATGCTCAAAAAGTAAAGAGGATGTATTAAGAAAGCGAAGGGGAAAGCTTCTCTCTCAGTCATCATCTGGGGTGGATGATGTAATTCCCAAGTACTCCGATGAAGATTTCCTAACAGTTATGAGTAAGTGA

Protein sequence

MRTKSGRPQPRVSMENTQEKQEENVESCVEESVVESRKNDRKGKRIVEEKSERLKKVEDKRAKCCVGNAISLALRSYLKLKDVDIKIEEGIKYMLERKHKEAAPITQGFSSIETELNCLDGITETTKPEREKNLLLILKRFQSPDGSHSIILVSVCLRKHLVEQEDEYGGILQGKCSKSKEDVLRKRRGKLLSQSSSGVDDVIPKYSDEDFLTVMSK

Homology

[Close]

BLAST of CmaCh17G012770 vs. ExPASy TrEMBL
Match: A0A6J1GQF8 (uncharacterized protein LOC111456533 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456533 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.3e-16
Identity = 76/188 (40.43%), Postives = 92/188 (48.94%), Query Frame = 0


Query: 81  KDVDIKIEEGIKY---MLERKHKEAAPITQGFSSIETELNCLDGITETTKPEREKNLLLI 140
           K V+ K  E I Y   + ERK+ EA PI Q  SSIET L+CLDG  E  K + E++LL  
Sbjct: 85  KPVEAKEIEEINYWENIAERKYTEAEPILQILSSIETRLSCLDGFIEIKKLKMERSLLFR 144

Query: 141 L--KRFQSPDGSHSIILVS------------------------------VCLRKHLVEQE 200
           L  ++F S        +V                               + LRK L+EQE
Sbjct: 145 LNPEKFSSYGRYEITFMVGRLRLRDLSTDYFWLLQGGVERSCIDMMEKLLRLRKQLIEQE 204

Query: 201 DEYGGILQGKCSKSKEDVLRK------------------RRGKLLSQSSSGVDDVIPKYS 216
           DEYG IL+GK  K+KEDVLR+                  RR  L SQSSS VDDVI K S
Sbjct: 205 DEYGDILKGKSLKNKEDVLRELVNTRRELEHAEKVYLISRRRNLRSQSSSEVDDVISKQS 264

[Close]

BLAST of CmaCh17G012770 vs. ExPASy TrEMBL
Match: A0A6J1GQA4 (uncharacterized protein LOC111456533 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456533 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.3e-16
Identity = 76/188 (40.43%), Postives = 92/188 (48.94%), Query Frame = 0


Query: 81  KDVDIKIEEGIKY---MLERKHKEAAPITQGFSSIETELNCLDGITETTKPEREKNLLLI 140
           K V+ K  E I Y   + ERK+ EA PI Q  SSIET L+CLDG  E  K + E++LL  
Sbjct: 85  KPVEAKEIEEINYWENIAERKYTEAEPILQILSSIETRLSCLDGFIEIKKLKMERSLLFR 144

Query: 141 L--KRFQSPDGSHSIILVS------------------------------VCLRKHLVEQE 200
           L  ++F S        +V                               + LRK L+EQE
Sbjct: 145 LNPEKFSSYGRYEITFMVGRLRLRDLSTDYFWLLQGGVERSCIDMMEKLLRLRKQLIEQE 204

Query: 201 DEYGGILQGKCSKSKEDVLRK------------------RRGKLLSQSSSGVDDVIPKYS 216
           DEYG IL+GK  K+KEDVLR+                  RR  L SQSSS VDDVI K S
Sbjct: 205 DEYGDILKGKSLKNKEDVLRELVNTRRELEHAEKVYLISRRRNLRSQSSSEVDDVISKQS 264

[Close]

BLAST of CmaCh17G012770 vs. ExPASy TrEMBL
Match: A0A6J1GQF7 (uncharacterized protein LOC111456533 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111456533 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 9.9e-09
Identity = 43/77 (55.84%), Postives = 48/77 (62.34%), Query Frame = 0


Query: 157 LRKHLVEQEDEYGGILQGKCSKSKEDVLRK------------------RRGKLLSQSSSG 216
           LRK L+EQEDEYG IL+GK  K+KEDVLR+                  RR  L SQSSS 
Sbjct: 8   LRKQLIEQEDEYGDILKGKSLKNKEDVLRELVNTRRELEHAEKVYLISRRRNLRSQSSSE 67

[Close]

BLAST of CmaCh17G012770 vs. NCBI nr
Match: XP_023548929.1 (uncharacterized protein LOC111807430 [Cucurbita pepo subsp. pepo] >XP_023548930.1 uncharacterized protein LOC111807430 [Cucurbita pepo subsp. pepo] >XP_023548931.1 uncharacterized protein LOC111807430 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.1 bits (653), Expect = 2.6e-64
Identity = 135/152 (88.82%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 14  MENTQEKQEENVESCVEESVVESRKNDRKGKRIVEEKSERLKKVEDKRAKCCVGNAISLA 73
           M+ TQEKQEENVESCVEES+VESRKNDRKGKRIVEEK+ERLKKVEDKRAKCCVGNAISLA
Sbjct: 1   MDTTQEKQEENVESCVEESIVESRKNDRKGKRIVEEKAERLKKVEDKRAKCCVGNAISLA 60

Query: 74  LRSYLKLKDVDIKIEEGIKYMLERKHKEAAPITQGFSSIETELNCLDGITETTKPEREKN 133
           LRSYLKLKDVDIKIEEGIKYM+ERKHKEAAPIT+GFSSIETELNCLDGITETTK EREKN
Sbjct: 61  LRSYLKLKDVDIKIEEGIKYMVERKHKEAAPITRGFSSIETELNCLDGITETTKLEREKN 120

Query: 134 LLLILKRFQSPDGSHSIILVSVCLRKHLVEQE 166
           LLLILKRFQSPDGSHSIILV+  LR  ++  +
Sbjct: 121 LLLILKRFQSPDGSHSIILVAGRLRLKILSTD 152

[Close]

BLAST of CmaCh17G012770 vs. NCBI nr
Match: XP_023548918.1 (uncharacterized protein LOC111807425 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-18
Identity = 78/193 (40.41%), Postives = 102/193 (52.85%), Query Frame = 0


Query: 73  ALRSYLKLKDVDIKIEEGIKYMLERKHKEAAPITQGFSSIETELNCLDGITETTKPEREK 132
           +LR  ++ K+++ KI +  + + ERK++EA PI Q  SSIET L CLDGITE  K + EK
Sbjct: 96  SLRKLVESKEIE-KINDW-ENIAERKYREAEPILQILSSIETRLTCLDGITEIKKLKMEK 155

Query: 133 NLLLIL--KRFQSPDGSHSIILVS------------------------------VCLRKH 192
           +LL  L  K+F S     + ++                                + LRK 
Sbjct: 156 SLLFRLNPKKFSSYRHYETTLMAGRLRLSDLSTDYFWLLQGGIERSCIDLIEKLLRLRKQ 215

Query: 193 LVEQEDEYGGILQGKCSKSKEDVLRK------------------RRGKLLSQSSSGVDDV 216
           L+EQEDEYG IL+GK  K+KEDVLR+                  RR   LSQSSS VDDV
Sbjct: 216 LIEQEDEYGDILKGKSLKNKEDVLRELVYTRRDLEHAEKVYLISRRRNPLSQSSSEVDDV 275

[Close]

BLAST of CmaCh17G012770 vs. NCBI nr
Match: XP_023548919.1 (uncharacterized protein LOC111807425 isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-18
Identity = 78/193 (40.41%), Postives = 102/193 (52.85%), Query Frame = 0


Query: 73  ALRSYLKLKDVDIKIEEGIKYMLERKHKEAAPITQGFSSIETELNCLDGITETTKPEREK 132
           +LR  ++ K+++ KI +  + + ERK++EA PI Q  SSIET L CLDGITE  K + EK
Sbjct: 95  SLRKLVESKEIE-KINDW-ENIAERKYREAEPILQILSSIETRLTCLDGITEIKKLKMEK 154

Query: 133 NLLLIL--KRFQSPDGSHSIILVS------------------------------VCLRKH 192
           +LL  L  K+F S     + ++                                + LRK 
Sbjct: 155 SLLFRLNPKKFSSYRHYETTLMAGRLRLSDLSTDYFWLLQGGIERSCIDLIEKLLRLRKQ 214

Query: 193 LVEQEDEYGGILQGKCSKSKEDVLRK------------------RRGKLLSQSSSGVDDV 216
           L+EQEDEYG IL+GK  K+KEDVLR+                  RR   LSQSSS VDDV
Sbjct: 215 LIEQEDEYGDILKGKSLKNKEDVLRELVYTRRDLEHAEKVYLISRRRNPLSQSSSEVDDV 274

[Close]

BLAST of CmaCh17G012770 vs. NCBI nr
Match: XP_023548916.1 (uncharacterized protein LOC111807425 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023548917.1 uncharacterized protein LOC111807425 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-18
Identity = 78/193 (40.41%), Postives = 102/193 (52.85%), Query Frame = 0


Query: 73  ALRSYLKLKDVDIKIEEGIKYMLERKHKEAAPITQGFSSIETELNCLDGITETTKPEREK 132
           +LR  ++ K+++ KI +  + + ERK++EA PI Q  SSIET L CLDGITE  K + EK
Sbjct: 101 SLRKLVESKEIE-KINDW-ENIAERKYREAEPILQILSSIETRLTCLDGITEIKKLKMEK 160

Query: 133 NLLLIL--KRFQSPDGSHSIILVS------------------------------VCLRKH 192
           +LL  L  K+F S     + ++                                + LRK 
Sbjct: 161 SLLFRLNPKKFSSYRHYETTLMAGRLRLSDLSTDYFWLLQGGIERSCIDLIEKLLRLRKQ 220

Query: 193 LVEQEDEYGGILQGKCSKSKEDVLRK------------------RRGKLLSQSSSGVDDV 216
           L+EQEDEYG IL+GK  K+KEDVLR+                  RR   LSQSSS VDDV
Sbjct: 221 LIEQEDEYGDILKGKSLKNKEDVLRELVYTRRDLEHAEKVYLISRRRNPLSQSSSEVDDV 280

[Close]

BLAST of CmaCh17G012770 vs. NCBI nr
Match: XP_023548920.1 (uncharacterized protein LOC111807425 isoform X5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-18
Identity = 78/193 (40.41%), Postives = 102/193 (52.85%), Query Frame = 0


Query: 73  ALRSYLKLKDVDIKIEEGIKYMLERKHKEAAPITQGFSSIETELNCLDGITETTKPEREK 132
           +LR  ++ K+++ KI +  + + ERK++EA PI Q  SSIET L CLDGITE  K + EK
Sbjct: 63  SLRKLVESKEIE-KINDW-ENIAERKYREAEPILQILSSIETRLTCLDGITEIKKLKMEK 122

Query: 133 NLLLIL--KRFQSPDGSHSIILVS------------------------------VCLRKH 192
           +LL  L  K+F S     + ++                                + LRK 
Sbjct: 123 SLLFRLNPKKFSSYRHYETTLMAGRLRLSDLSTDYFWLLQGGIERSCIDLIEKLLRLRKQ 182

Query: 193 LVEQEDEYGGILQGKCSKSKEDVLRK------------------RRGKLLSQSSSGVDDV 216
           L+EQEDEYG IL+GK  K+KEDVLR+                  RR   LSQSSS VDDV
Sbjct: 183 LIEQEDEYGDILKGKSLKNKEDVLRELVYTRRDLEHAEKVYLISRRRNPLSQSSSEVDDV 242

The following BLAST results are available for this feature:

BLAST of CmaCh17G012770 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh17G012770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GQF8	1.3e-16	40.43	uncharacterized protein LOC111456533 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GQA4	1.3e-16	40.43	uncharacterized protein LOC111456533 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GQF7	9.9e-09	55.84	uncharacterized protein LOC111456533 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CmaCh17G012770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023548929.1	2.6e-64	88.82	uncharacterized protein LOC111807430 [Cucurbita pepo subsp. pepo] >XP_023548930....	[more]
XP_023548918.1	2.2e-18	40.41	uncharacterized protein LOC111807425 isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_023548919.1	2.2e-18	40.41	uncharacterized protein LOC111807425 isoform X4 [Cucurbita pepo subsp. pepo]	[more]
XP_023548916.1	2.2e-18	40.41	uncharacterized protein LOC111807425 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_023548920.1	2.2e-18	40.41	uncharacterized protein LOC111807425 isoform X5 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh17G012770 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..45

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G012770.1	CmaCh17G012770.1	mRNA