CmaCh17G011530 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G011530
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	auxin-binding protein T85
Location	Cma_Chr17: 8017899 .. 8021236 (+)
RNA-Seq Expression	CmaCh17G011530
Synteny	CmaCh17G011530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGATCGAGCTCCAAAAATGGTGAAATTGCAGAAGCGATTGGATGGCGGGACTTTCCTTAGCTTTATCTCTTTGCTTAATTTTCCTTCCTGCGATATCCGAAGCATCCCGTTGCTCGATCATTGGTATGTACTTTTCTTCTTCCACCACCAGATTTTAGCTTCTCCTGCGCCGTTTCGCACTTTTTGCTTCGATGTTTTGCTTGTCTGTGCTTCGTAAACTCCGAAGAAGTTGAGTTTTGTCATATGCAATGCTCTTGATATTACATGTTTTTTGTTTGCTCCCTTTGGTTTCCATTTGAGTAGCTTTTGAAGCCCTTTTGGCCATTAGAGACGTTTTTTGAAGTACCTAGGCGGCAACCAGATCAATACCTTCCTTCGAGTTTCTCATCGAATTTTCGCGGATTTTGATGGCTTCCACCGGCATTTTGGACGACGATTAACTCATCTCCCAAAAACGACGGAATGAGAGCCGTCCAATCAATGATAATCATGAAGAGATTGTAATTACAAATAATTTTTGTGTAAAATTATCCATCTAAGCGCTGTGTTTTGTGCAAGACTACTCAAATGTAAAAACGTATAGACCTAAAGGATCTTGCACTTCTTTCTTTCCATTTATGTCACCAAAGTGCTCTAAAGGCACAGCTCCGTACGACCTTGGTTTTCCCCATCAGATTCCACGCATAAGCCAATCTTCCACTCTTCTAGGAAGAAAAGTAGAAACTCCCAGATTTCCAAACAAGTAATTCTCTGAAACTGAAGACGTTGTCTTGAATAATGGTATCCATAAAATTGGGCTTCAGATTTTACACAATACCTTCATTGGGTTAATACGTTTTAAGACTAGAAATATGGTGGTTTTTGGTTTTAAGGTATTTGAGTATTGAACATGTTATGTCATGATAACATTCAGGACGAAGCGCTACAAATTTACTACCGAACTAATCGATGTTCTGCTCTGTTTTGAGTCTTCGAATTGTTGTATTTAAGCTTACCTATGTGACTTCGGACCCAAGTGTTTTGATGTGTATTTGTGAAGGGGATGGTCTGAAAGTTGAACTTTGTGTACCTGACTGACTTCCGTATGGTAGCTAACATTTTTTGGTGTTTTTAAATGCATCTAAATTTTTTCATAGATCCAGGGTTGCCTCTTGTAAGAAATATCAGTGAGCTTCCACAAGATAACTATGGAAGAGGAGGCTTGTCTCACATTACCGTTGCAGGTTCACTATTGCATGGGCTGAAGGAGGTATGGCGTGTTCATCCTTCGAGGTTCTAGAACCTAGCCAAGCTTTGTAATGAAACAAAATATATTTTTTATTGGCTTGTGCTAGCCATTTACCACTTTATTGAATTTTGCAGGTGGAAGTGTGGCTCCAAACATTTTCCCCTGGATCACACACACCTATTCACAGGCACTCCTGTGAAGAAGTTTTTGTGGTTTTGAAGGGGACTGGCACTCTCTTTCTCGCACCTAGTTCTCATGGAAAGTACCCTGGAACACCAAAAGAATTTTCTATCTATTCAAACTGTACATTTCACATACCTGTTAATGATGCTCACCAGGTACGTTGTTCTACTTAAATCCCCTCCTTGCTTTAGAAGTATCCATAAATATTGTGGGCTTAGTTGATATACATCATTTCTGGTTGCTTACAAACTTAGGGTATTAAACCCAATAATTTCGTTTGAGGTAGATTATGAAAATAACCCAAGTCTCAAATGTCTAGTCTTGCTATCCTTAGAATTTTTGTTGCCATGCAATGAGTATTGGAAAGCTTATGGAAGCCTTCTTTTTTAAAGATGGCGAGGGTGAGTGGTTCGAAAAAATTGGAAGTTCAATGGATCTAAAGAAAATAAATCAAGCTAGGATGAACGAGACTTTACTTTGCCAATGGAAGAATTTTCTATGGCTGAAGATGTTGATTTGAATTTTCTATGGCCTAAGCAAAACATTCAAAATGAGAGAAATAGCACAAATTACTCAGCTGTCAAATAAAAGCTAGGGTAAGTGCTAAAATAATCTCACTTCATAGGATTTTCAGTAGTCAACAGAAAACTACTGGTTCATTGAATCTTATTATATATAATTTTCTTTATGAGGGTCGGGAGTGTATTTGCTCTTGCAAATGAATTTTGGTATTTTTCCCCAAGGAGCATCTTGAATTAAGGATAGGGAGGAAAGAAGGGCGTAGTTTCTTGATTTCTAAACCTCCTTCTCATGTGTATCTTGCTTGAATGTTCTTTTGGTTATCTGTCCGTTGAAACTGCCATTTTGCTAATTGGGAATTTGGAAGGTGAAACTACCAAATAAGGTCAATGTTTCTGCTCAGTTTGTGGTTAATGAGATTGATTGTTCTTTGGGTCTTAAACGGGGATTTGCGGCTACATGTTTTTTGATGAAAAATTAAACTACAAGGCAAAAGCCTTCAAAATCCTTCCACTCCCACTGGACTCTTCAGACTTCTTCATTGCATGATTTTCCATGCTTGCTTTCCATCCCACCCCATGGAAGAAAGGAAACACAATCAGGCTTAGGCCTAGATATATGCATATGCAAACTGAGGACGGGTTTTTGGAGTTAGCTACTTCCTCTTATACTGTCTTTGAGGAGTTGAGGCCTGACCTCCTCCTCCCTTTGTTTTATGGGATAATGAAGTTTACTGTTTACTATATATATATATATGGATGGATGGATAGATAGATATAGATATGATTATATTTATACGTTCCTGTTCTTTTAGTGGATCAAAGAATCATGAAATCTGGCTTTCAGATGAAACCTTTCTCCAGTGACTTTCTACATTGATCTATGAAATGTGGACCGATGTGCATGGTATCATCAGTTTAAGCCCCTGATCATGCTTGCAATGCTTTTTTTTTTTTTTTTTTTTCCAAATTATATTTTCAGTTTATCAAATACACCACAATGTTCAAACAATTCTCAACTCAAACCAAGCCTCTGATATCACTTGAATGGTTAACCATTAACACAGATATGGAATACGAATGAACATGAGGATTTGCAGATGCTTGTCATCATTTCCAGGCCACCAGCCAAAGTGTGCGTATTTTTCTTCCATTTTACATTATGTATTTCATCTTTGGTCGTTTTTATAACTTGAGCTTAACGAATTATACATTTGCTTGAAGAAGGTCATTATGGTATTTAGGAGTAAATTGAAGGTGAGACTCATGAACAACCAAGATGTTTTGGTTTATGGTTGCAGGTTTATTTATGATGACTGGGCCATGCCCCATACTGCTGCAAGATTGAAGTTCCCCTACTATTGGGATGAACAGTGTTTTGAAGCGCCCGTAAAGGATGAACTTTGA

mRNA sequence

GGAGATCGAGCTCCAAAAATGGTGAAATTGCAGAAGCGATTGGATGGCGGGACTTTCCTTAGCTTTATCTCTTTGCTTAATTTTCCTTCCTGCGATATCCGAAGCATCCCGTTGCTCGATCATTGATCCAGGGTTGCCTCTTGTAAGAAATATCAGTGAGCTTCCACAAGATAACTATGGAAGAGGAGGCTTGTCTCACATTACCGTTGCAGGTTCACTATTGCATGGGCTGAAGGAGGTGGAAGTGTGGCTCCAAACATTTTCCCCTGGATCACACACACCTATTCACAGGCACTCCTGTGAAGAAGTTTTTGTGGTTTTGAAGGGGACTGGCACTCTCTTTCTCGCACCTAGTTCTCATGGAAAGTACCCTGGAACACCAAAAGAATTTTCTATCTATTCAAACTGTACATTTCACATACCTGTTAATGATGCTCACCAGATATGGAATACGAATGAACATGAGGATTTGCAGATGCTTGTCATCATTTCCAGGCCACCAGCCAAAGTGTTTATTTATGATGACTGGGCCATGCCCCATACTGCTGCAAGATTGAAGTTCCCCTACTATTGGGATGAACAGTGTTTTGAAGCGCCCGTAAAGGATGAACTTTGA

Coding sequence (CDS)

ATGGCGGGACTTTCCTTAGCTTTATCTCTTTGCTTAATTTTCCTTCCTGCGATATCCGAAGCATCCCGTTGCTCGATCATTGATCCAGGGTTGCCTCTTGTAAGAAATATCAGTGAGCTTCCACAAGATAACTATGGAAGAGGAGGCTTGTCTCACATTACCGTTGCAGGTTCACTATTGCATGGGCTGAAGGAGGTGGAAGTGTGGCTCCAAACATTTTCCCCTGGATCACACACACCTATTCACAGGCACTCCTGTGAAGAAGTTTTTGTGGTTTTGAAGGGGACTGGCACTCTCTTTCTCGCACCTAGTTCTCATGGAAAGTACCCTGGAACACCAAAAGAATTTTCTATCTATTCAAACTGTACATTTCACATACCTGTTAATGATGCTCACCAGATATGGAATACGAATGAACATGAGGATTTGCAGATGCTTGTCATCATTTCCAGGCCACCAGCCAAAGTGTTTATTTATGATGACTGGGCCATGCCCCATACTGCTGCAAGATTGAAGTTCCCCTACTATTGGGATGAACAGTGTTTTGAAGCGCCCGTAAAGGATGAACTTTGA

Protein sequence

MAGLSLALSLCLIFLPAISEASRCSIIDPGLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQCFEAPVKDEL

Homology

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BLAST of CmaCh17G011530 vs. ExPASy Swiss-Prot
Match: P33490 (Auxin-binding protein T85 OS=Nicotiana tabacum OX=4097 GN=T85 PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 5.3e-80
Identity = 134/184 (72.83%), Postives = 157/184 (85.33%), Query Frame = 0


Query: 8   LSLCLIFLPAISEASRCSIIDPGLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVE 67
           L +  + L A +EAS+CSI   GLPLVRNISELPQ+NYGR GLSH T+AGS+LHG+KE+E
Sbjct: 6   LVVVAVLLFATAEASQCSI--NGLPLVRNISELPQENYGRSGLSHTTIAGSVLHGMKEIE 65

Query: 68  VWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIP 127
           VWLQTF+PGS TPIHRHSCEE+FVVLKG G L+L PSSH KYPG P+EF I+ N TFHIP
Sbjct: 66  VWLQTFAPGSRTPIHRHSCEEIFVVLKGQGILYLTPSSHSKYPGNPQEFHIFPNSTFHIP 125

Query: 128 VNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQCFEAPV- 187
           VND HQ+WNT EHEDLQ+LV+ISRPP KVF+YDDW+MPHTAA+LKFPYYWDE+C++    
Sbjct: 126 VNDVHQVWNTGEHEDLQVLVVISRPPVKVFMYDDWSMPHTAAKLKFPYYWDEECYQTTSW 185

Query: 188 KDEL 191
           KDEL
Sbjct: 186 KDEL 187

[Close]

BLAST of CmaCh17G011530 vs. ExPASy Swiss-Prot
Match: P33491 (Auxin-binding protein T92 OS=Nicotiana tabacum OX=4097 GN=T92 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 2.9e-78
Identity = 131/182 (71.98%), Postives = 153/182 (84.07%), Query Frame = 0


Query: 10  LCLIFLPAISEASRCSIIDPGLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVW 69
           L  +F  A +EAS CSI   GLPLVRNISELPQ+NYGR GLSH T+AGS+LHG+KE+EVW
Sbjct: 8   LVAVFWFATAEASHCSI--NGLPLVRNISELPQENYGRSGLSHTTIAGSVLHGMKEIEVW 67

Query: 70  LQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVN 129
           LQTF+PG  TPIHRHSCEE+F+VLKG GTL+L PSSH KYPG P+EF I+ N TFHIPVN
Sbjct: 68  LQTFAPGFRTPIHRHSCEEIFIVLKGQGTLYLTPSSHSKYPGNPQEFHIFPNSTFHIPVN 127

Query: 130 DAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQCFEAPV-KD 189
           D HQ+WNT E EDLQ+L +ISRPP KVF+YDDW+MPHTAA+LKFPYYWDE+C++    KD
Sbjct: 128 DVHQVWNTGEQEDLQVLDVISRPPVKVFMYDDWSMPHTAAKLKFPYYWDEECYQTTSRKD 187

Query: 190 EL 191
           EL
Sbjct: 188 EL 187

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BLAST of CmaCh17G011530 vs. ExPASy Swiss-Prot
Match: P33487 (Auxin-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=ERABP1 PE=1 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 8.2e-73
Identity = 128/184 (69.57%), Postives = 152/184 (82.61%), Query Frame = 0


Query: 7   ALSLCLIFLPAISEASRCSIIDPGLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEV 66
           +++L L +    S  + C I   GLP+VRNIS+LPQDNYGR GLSH+TVAGS+LHG+KEV
Sbjct: 19  SVALLLFYFSETSLGAPCPI--NGLPIVRNISDLPQDNYGRPGLSHMTVAGSVLHGMKEV 78

Query: 67  EVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHI 126
           E+WLQTF+PGS TPIHRHSCEEVFVVLKG+GTL+LA  +HG +PG P EF I++N T HI
Sbjct: 79  EIWLQTFAPGSETPIHRHSCEEVFVVLKGSGTLYLA-ETHGNFPGKPIEFPIFANSTIHI 138

Query: 127 PVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQCFEAPV 186
           P+NDAHQ+ NT  HEDLQ+LVIISRPP K+FIY+DW MPHTAARLKFPYYWDEQC +   
Sbjct: 139 PINDAHQVKNTG-HEDLQVLVIISRPPIKIFIYEDWFMPHTAARLKFPYYWDEQCIQESQ 198

Query: 187 KDEL 191
           KDEL
Sbjct: 199 KDEL 198

[Close]

BLAST of CmaCh17G011530 vs. ExPASy Swiss-Prot
Match: P33488 (Auxin-binding protein 4 OS=Zea mays OX=4577 GN=ABP4 PE=2 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.5e-66
Identity = 115/158 (72.78%), Postives = 129/158 (81.65%), Query Frame = 0


Query: 33  LVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVV 92
           LVR+IS + Q NYGR G SHITV G+L HG KEVEVWLQTF PG  TPIHRHSCEEVF+V
Sbjct: 49  LVRDISRMQQRNYGREGFSHITVTGALAHGTKEVEVWLQTFGPGQRTPIHRHSCEEVFIV 108

Query: 93  LKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHIPVNDAHQIWNTNEHEDLQMLVIISRP 152
           LKG GTL L  SS  KYPG P+E  ++ N TF IPVND HQ+WN+NEHEDLQ+LVIISRP
Sbjct: 109 LKGKGTLLLGSSSL-KYPGQPQEVPVFQNTTFSIPVNDPHQVWNSNEHEDLQVLVIISRP 168

Query: 153 PAKVFIYDDWAMPHTAARLKFPYYWDEQCFEAPVKDEL 191
           P K+FIYDDW+MPHTAA+LKFPY+WDE C  AP KDEL
Sbjct: 169 PVKIFIYDDWSMPHTAAKLKFPYFWDEDCLPAP-KDEL 204

[Close]

BLAST of CmaCh17G011530 vs. ExPASy Swiss-Prot
Match: P13689 (Auxin-binding protein 1 OS=Zea mays OX=4577 GN=ABP1 PE=1 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 5.7e-66
Identity = 124/190 (65.26%), Postives = 149/190 (78.42%), Query Frame = 0


Query: 1   MAGLSLALSLCLIFLPAISEASRCSIIDPGLPLVRNISELPQDNYGRGGLSHITVAGSLL 60
           +AG+ +A+ L   FLP ++E+S   + D    LVR+IS++PQ +YG  GLSHITVAG+L 
Sbjct: 19  LAGVGVAVLLAASFLP-VAESS--CVRDNS--LVRDISQMPQSSYGIEGLSHITVAGALN 78

Query: 61  HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYS 120
           HG+KEVEVWLQT SPG  TPIHRHSCEEVF VLKG GTL +  SS  KYPG P+E   + 
Sbjct: 79  HGMKEVEVWLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSSL-KYPGQPQEIPFFQ 138

Query: 121 NCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQ 180
           N TF IPVND HQ+WN++EHEDLQ+LVIISRPPAK+F+YDDW+MPHTAA LKFP+ WDE 
Sbjct: 139 NTTFSIPVNDPHQVWNSDEHEDLQVLVIISRPPAKIFLYDDWSMPHTAAVLKFPFVWDED 198

Query: 181 CFEAPVKDEL 191
           CFEA  KDEL
Sbjct: 199 CFEA-AKDEL 201

[Close]

BLAST of CmaCh17G011530 vs. ExPASy TrEMBL
Match: A0A6J1JQ76 (auxin-binding protein T85 OS=Cucurbita maxima OX=3661 GN=LOC111488844 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 4.5e-106
Identity = 188/190 (98.95%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MAGLSLALSLCLIFLPAISEASRCSIIDPGLPLVRNISELPQDNYGRGGLSHITVAGSLL 60
           MAGLSLALSLCLIFLPAISEASRCSII  GLPLVRNISELPQDNYGRGGLSHITVAGSLL
Sbjct: 1   MAGLSLALSLCLIFLPAISEASRCSII--GLPLVRNISELPQDNYGRGGLSHITVAGSLL 60

Query: 61  HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYS 120
           HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYS
Sbjct: 61  HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYS 120

Query: 121 NCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQ 180
           NCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQ
Sbjct: 121 NCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQ 180

Query: 181 CFEAPVKDEL 191
           CFEAPVKDEL
Sbjct: 181 CFEAPVKDEL 188

[Close]

BLAST of CmaCh17G011530 vs. ExPASy TrEMBL
Match: A0A6J1GNG5 (auxin-binding protein T85 OS=Cucurbita moschata OX=3662 GN=LOC111456045 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 2.9e-105
Identity = 186/190 (97.89%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MAGLSLALSLCLIFLPAISEASRCSIIDPGLPLVRNISELPQDNYGRGGLSHITVAGSLL 60
           MAGLSLALSLCLIFLPAISEASRCSII  GLPLVRNISELPQDNYGRGGLSHITVAGSLL
Sbjct: 1   MAGLSLALSLCLIFLPAISEASRCSII--GLPLVRNISELPQDNYGRGGLSHITVAGSLL 60

Query: 61  HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYS 120
           HGLKEVEVWLQTFSPGSHTPIHRHSCEEVF+VLKGTGTLFLAPSSHGKYPGTPKEFSIYS
Sbjct: 61  HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYS 120

Query: 121 NCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQ 180
           NCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIY+DWAMPHTAARLKFPYYWDEQ
Sbjct: 121 NCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQ 180

Query: 181 CFEAPVKDEL 191
           CFEAPVKDEL
Sbjct: 181 CFEAPVKDEL 188

[Close]

BLAST of CmaCh17G011530 vs. ExPASy TrEMBL
Match: A0A6J1DA75 (auxin-binding protein T85 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018456 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.1e-95
Identity = 170/190 (89.47%), Postives = 176/190 (92.63%), Query Frame = 0


Query: 1   MAGLSLALSLCLIFLPAISEASRCSIIDPGLPLVRNISELPQDNYGRGGLSHITVAGSLL 60
           MAGL LAL  C IF PAISEASRCSI   GLPLVRNISELPQDNYGRGGLSHITVAGS+L
Sbjct: 1   MAGLHLALIFCSIFFPAISEASRCSI--TGLPLVRNISELPQDNYGRGGLSHITVAGSIL 60

Query: 61  HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYS 120
           HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTL+LAP SH KYPGTPKEFSIYS
Sbjct: 61  HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLAPESHEKYPGTPKEFSIYS 120

Query: 121 NCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQ 180
           N TF IP+NDAHQ+WNTNEHEDLQMLVIISRPPAKVFIY+DW+MPHTAARLKFPY WDEQ
Sbjct: 121 NSTFIIPINDAHQVWNTNEHEDLQMLVIISRPPAKVFIYNDWSMPHTAARLKFPYSWDEQ 180

Query: 181 CFEAPVKDEL 191
           CFE PVKDEL
Sbjct: 181 CFEPPVKDEL 188

[Close]

BLAST of CmaCh17G011530 vs. ExPASy TrEMBL
Match: A0A1S3BS71 (auxin-binding protein T85 OS=Cucumis melo OX=3656 GN=6D05 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 6.7e-94
Identity = 173/191 (90.58%), Postives = 176/191 (92.15%), Query Frame = 0


Query: 1   MAGLSLALSLCLIFLPAISEASRCSIIDPGLPLVRNISELPQDNYGRGGLSHITVAGSLL 60
           MAG S ALS C IFL AI+EASRCSII  GLPLVRNISELPQDNYGRGGLSHITVAGSLL
Sbjct: 1   MAGFSFALSFCSIFLFAITEASRCSII--GLPLVRNISELPQDNYGRGGLSHITVAGSLL 60

Query: 61  HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYS 120
           HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTL+ APSSH KYPGTPKEF IYS
Sbjct: 61  HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYS 120

Query: 121 NCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQ 180
           N TF IPVNDAHQ+ NTNEHEDLQMLVIISRPPAKVFIYDDW MPHTAARLKFPYYWDEQ
Sbjct: 121 NSTFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQ 180

Query: 181 CFEA-PVKDEL 191
           CFEA PVKDEL
Sbjct: 181 CFEAPPVKDEL 189

[Close]

BLAST of CmaCh17G011530 vs. ExPASy TrEMBL
Match: A0A0A0K905 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392300 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 6.3e-92
Identity = 171/191 (89.53%), Postives = 175/191 (91.62%), Query Frame = 0


Query: 1   MAGLSLALSLCLIFLPAISEASRCSIIDPGLPLVRNISELPQDNYGRGGLSHITVAGSLL 60
           MA  SLALS C IFL AI+EASRCSII  G+PLVRNISELPQDNYGRGGLSHITVAGSLL
Sbjct: 1   MAVFSLALSFCSIFLFAIAEASRCSII--GVPLVRNISELPQDNYGRGGLSHITVAGSLL 60

Query: 61  HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYS 120
           HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTL+ APSSH K PGTPKEF IYS
Sbjct: 61  HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKCPGTPKEFPIYS 120

Query: 121 NCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQ 180
           N TF IPVNDAHQ+ NTNEHEDLQMLVIISRPPAKVFIYDDW MPHTAARLKFPYYWDEQ
Sbjct: 121 NSTFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQ 180

Query: 181 CFEA-PVKDEL 191
           CFEA PVKDEL
Sbjct: 181 CFEAPPVKDEL 189

[Close]

BLAST of CmaCh17G011530 vs. NCBI nr
Match: XP_022992557.1 (auxin-binding protein T85 [Cucurbita maxima])

HSP 1 Score: 393.7 bits (1010), Expect = 9.3e-106
Identity = 188/190 (98.95%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MAGLSLALSLCLIFLPAISEASRCSIIDPGLPLVRNISELPQDNYGRGGLSHITVAGSLL 60
           MAGLSLALSLCLIFLPAISEASRCSII  GLPLVRNISELPQDNYGRGGLSHITVAGSLL
Sbjct: 1   MAGLSLALSLCLIFLPAISEASRCSII--GLPLVRNISELPQDNYGRGGLSHITVAGSLL 60

Query: 61  HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYS 120
           HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYS
Sbjct: 61  HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYS 120

Query: 121 NCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQ 180
           NCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQ
Sbjct: 121 NCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQ 180

Query: 181 CFEAPVKDEL 191
           CFEAPVKDEL
Sbjct: 181 CFEAPVKDEL 188

[Close]

BLAST of CmaCh17G011530 vs. NCBI nr
Match: XP_022953527.1 (auxin-binding protein T85 [Cucurbita moschata] >KAG6575883.1 Auxin-binding protein T85, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 391.0 bits (1003), Expect = 6.0e-105
Identity = 186/190 (97.89%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MAGLSLALSLCLIFLPAISEASRCSIIDPGLPLVRNISELPQDNYGRGGLSHITVAGSLL 60
           MAGLSLALSLCLIFLPAISEASRCSII  GLPLVRNISELPQDNYGRGGLSHITVAGSLL
Sbjct: 1   MAGLSLALSLCLIFLPAISEASRCSII--GLPLVRNISELPQDNYGRGGLSHITVAGSLL 60

Query: 61  HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYS 120
           HGLKEVEVWLQTFSPGSHTPIHRHSCEEVF+VLKGTGTLFLAPSSHGKYPGTPKEFSIYS
Sbjct: 61  HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYS 120

Query: 121 NCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQ 180
           NCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIY+DWAMPHTAARLKFPYYWDEQ
Sbjct: 121 NCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQ 180

Query: 181 CFEAPVKDEL 191
           CFEAPVKDEL
Sbjct: 181 CFEAPVKDEL 188

[Close]

BLAST of CmaCh17G011530 vs. NCBI nr
Match: XP_023549483.1 (auxin-binding protein T85 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 389.8 bits (1000), Expect = 1.3e-104
Identity = 186/190 (97.89%), Postives = 187/190 (98.42%), Query Frame = 0


Query: 1   MAGLSLALSLCLIFLPAISEASRCSIIDPGLPLVRNISELPQDNYGRGGLSHITVAGSLL 60
           MAGLSLA+SLCLIFLPAISEAS CSII  GLPLVRNISELPQDNYGRGGLSHITVAGSLL
Sbjct: 1   MAGLSLAVSLCLIFLPAISEASPCSII--GLPLVRNISELPQDNYGRGGLSHITVAGSLL 60

Query: 61  HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYS 120
           HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYS
Sbjct: 61  HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYS 120

Query: 121 NCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQ 180
           NCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQ
Sbjct: 121 NCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQ 180

Query: 181 CFEAPVKDEL 191
           CFEAPVKDEL
Sbjct: 181 CFEAPVKDEL 188

[Close]

BLAST of CmaCh17G011530 vs. NCBI nr
Match: XP_038896169.1 (auxin-binding protein T85 [Benincasa hispida])

HSP 1 Score: 364.8 bits (935), Expect = 4.6e-97
Identity = 176/190 (92.63%), Postives = 178/190 (93.68%), Query Frame = 0


Query: 1   MAGLSLALSLCLIFLPAISEASRCSIIDPGLPLVRNISELPQDNYGRGGLSHITVAGSLL 60
           MAGLSLALS CLIFL AISEASRCSII  GLPLVRNISELPQDNYGRGG SHITVAGSLL
Sbjct: 3   MAGLSLALSFCLIFLFAISEASRCSII--GLPLVRNISELPQDNYGRGGFSHITVAGSLL 62

Query: 61  HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYS 120
           HGLKEVEVWLQTFSPGS TPIHRHSCEEVFVVLKGTGTL+LAPSSH KYPGTPKEF IYS
Sbjct: 63  HGLKEVEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLAPSSHEKYPGTPKEFPIYS 122

Query: 121 NCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQ 180
           N TF IPVNDAHQ+WNTNEHEDLQML IISRPPAKVFIYDDW MPHTAARLKFPYYWDEQ
Sbjct: 123 NSTFLIPVNDAHQVWNTNEHEDLQMLAIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQ 182

Query: 181 CFEAPVKDEL 191
           CFEAPVKDEL
Sbjct: 183 CFEAPVKDEL 190

[Close]

BLAST of CmaCh17G011530 vs. NCBI nr
Match: XP_022150242.1 (auxin-binding protein T85 isoform X2 [Momordica charantia])

HSP 1 Score: 358.2 bits (918), Expect = 4.3e-95
Identity = 170/190 (89.47%), Postives = 176/190 (92.63%), Query Frame = 0


Query: 1   MAGLSLALSLCLIFLPAISEASRCSIIDPGLPLVRNISELPQDNYGRGGLSHITVAGSLL 60
           MAGL LAL  C IF PAISEASRCSI   GLPLVRNISELPQDNYGRGGLSHITVAGS+L
Sbjct: 1   MAGLHLALIFCSIFFPAISEASRCSI--TGLPLVRNISELPQDNYGRGGLSHITVAGSIL 60

Query: 61  HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYS 120
           HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTL+LAP SH KYPGTPKEFSIYS
Sbjct: 61  HGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLAPESHEKYPGTPKEFSIYS 120

Query: 121 NCTFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQ 180
           N TF IP+NDAHQ+WNTNEHEDLQMLVIISRPPAKVFIY+DW+MPHTAARLKFPY WDEQ
Sbjct: 121 NSTFIIPINDAHQVWNTNEHEDLQMLVIISRPPAKVFIYNDWSMPHTAARLKFPYSWDEQ 180

Query: 181 CFEAPVKDEL 191
           CFE PVKDEL
Sbjct: 181 CFEPPVKDEL 188

[Close]

BLAST of CmaCh17G011530 vs. TAIR 10
Match: AT4G02980.1 (endoplasmic reticulum auxin binding protein 1 )

HSP 1 Score: 274.6 bits (701), Expect = 5.8e-74
Identity = 128/184 (69.57%), Postives = 152/184 (82.61%), Query Frame = 0


Query: 7   ALSLCLIFLPAISEASRCSIIDPGLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEV 66
           +++L L +    S  + C I   GLP+VRNIS+LPQDNYGR GLSH+TVAGS+LHG+KEV
Sbjct: 19  SVALLLFYFSETSLGAPCPI--NGLPIVRNISDLPQDNYGRPGLSHMTVAGSVLHGMKEV 78

Query: 67  EVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNCTFHI 126
           E+WLQTF+PGS TPIHRHSCEEVFVVLKG+GTL+LA  +HG +PG P EF I++N T HI
Sbjct: 79  EIWLQTFAPGSETPIHRHSCEEVFVVLKGSGTLYLA-ETHGNFPGKPIEFPIFANSTIHI 138

Query: 127 PVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQCFEAPV 186
           P+NDAHQ+ NT  HEDLQ+LVIISRPP K+FIY+DW MPHTAARLKFPYYWDEQC +   
Sbjct: 139 PINDAHQVKNTG-HEDLQVLVIISRPPIKIFIYEDWFMPHTAARLKFPYYWDEQCIQESQ 198

Query: 187 KDEL 191
           KDEL
Sbjct: 199 KDEL 198

The following BLAST results are available for this feature:

BLAST of CmaCh17G011530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33490	5.3e-80	72.83	Auxin-binding protein T85 OS=Nicotiana tabacum OX=4097 GN=T85 PE=3 SV=1	[more]
P33491	2.9e-78	71.98	Auxin-binding protein T92 OS=Nicotiana tabacum OX=4097 GN=T92 PE=3 SV=1	[more]
P33487	8.2e-73	69.57	Auxin-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=ERABP1 PE=1 SV=1	[more]
P33488	1.5e-66	72.78	Auxin-binding protein 4 OS=Zea mays OX=4577 GN=ABP4 PE=2 SV=1	[more]
P13689	5.7e-66	65.26	Auxin-binding protein 1 OS=Zea mays OX=4577 GN=ABP1 PE=1 SV=1	[more]

BLAST of CmaCh17G011530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JQ76	4.5e-106	98.95	auxin-binding protein T85 OS=Cucurbita maxima OX=3661 GN=LOC111488844 PE=4 SV=1	[more]
A0A6J1GNG5	2.9e-105	97.89	auxin-binding protein T85 OS=Cucurbita moschata OX=3662 GN=LOC111456045 PE=4 SV=...	[more]
A0A6J1DA75	2.1e-95	89.47	auxin-binding protein T85 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A1S3BS71	6.7e-94	90.58	auxin-binding protein T85 OS=Cucumis melo OX=3656 GN=6D05 PE=4 SV=1	[more]
A0A0A0K905	6.3e-92	89.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392300 PE=4 SV=1	[more]

BLAST of CmaCh17G011530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022992557.1	9.3e-106	98.95	auxin-binding protein T85 [Cucurbita maxima]	[more]
XP_022953527.1	6.0e-105	97.89	auxin-binding protein T85 [Cucurbita moschata] >KAG6575883.1 Auxin-binding prote...	[more]
XP_023549483.1	1.3e-104	97.89	auxin-binding protein T85 [Cucurbita pepo subsp. pepo]	[more]
XP_038896169.1	4.6e-97	92.63	auxin-binding protein T85 [Benincasa hispida]	[more]
XP_022150242.1	4.3e-95	89.47	auxin-binding protein T85 isoform X2 [Momordica charantia]	[more]

BLAST of CmaCh17G011530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02980.1	5.8e-74	69.57	endoplasmic reticulum auxin binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000526	Auxin-binding protein	PRINTS	PR00655	AUXINBINDNGP	coord: 32..51 score: 75.0 coord: 106..119 score: 56.49 coord: 119..134 score: 64.77 coord: 52..72 score: 81.82 coord: 162..181 score: 80.91 coord: 75..99 score: 86.18 coord: 140..162 score: 82.21
IPR000526	Auxin-binding protein	PFAM	PF02041	Auxin_BP	coord: 23..190 e-value: 2.7E-96 score: 319.9
IPR000526	Auxin-binding protein	PANTHER	PTHR37236	AUXIN-BINDING PROTEIN 1	coord: 7..190
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 28..190 e-value: 3.7E-64 score: 216.8
None	No IPR available	PANTHER	PTHR37236:SF1	AUXIN-BINDING PROTEIN 1	coord: 7..190
None	No IPR available	CDD	cd02220	cupin_ABP1	coord: 32..183 e-value: 7.67684E-114 score: 318.59
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 22..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G011530.1	CmaCh17G011530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0051781	positive regulation of cell division
biological_process	GO:0045793	positive regulation of cell size
biological_process	GO:0032877	positive regulation of DNA endoreduplication
biological_process	GO:0009826	unidimensional cell growth
cellular_component	GO:0005788	endoplasmic reticulum lumen
molecular_function	GO:0010011	auxin binding