Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCAGTCTTATGAATCACAGCTGCAAGACGAGGTTCAACCCCTCCTCCGCTCCGGCCACCGTCGACCGTTGCGCCGGTGGATCCATCTGCAGAGGAAGAAGCTGTCAACGGCCCGCCTCGGCGGCAGAAGGCCGCCGCGAGCGGTGGTGATTTGGAGGTCGATTAGGGAAGTTCGAATGAGAAAGTGGATGATGAAGGTCCGATGTGATTGTAAGGTGAAAAAGATGAATGAATTGTTAGGCAAAGACAATGGCAGTTTCAATGGTTTTCTTAAAAGGATTCTAATGGAGATTTCTTTGGCTGTTCCTGTTTTAGGCGCTTCTCGGTTTATATAA
mRNA sequence
ATGGCTCAGTCTTATGAATCACAGCTGCAAGACGAGGTTCAACCCCTCCTCCGCTCCGGCCACCGTCGACCGTTGCGCCGGTGGATCCATCTGCAGAGGAAGAAGCTGTCAACGGCCCGCCTCGGCGGCAGAAGGCCGCCGCGAGCGGTGGTGATTTGGAGGTCGATTAGGGAAGTTCGAATGAGAAAGTGGATGATGAAGGTCCGATGTGATTGTAAGGTGAAAAAGATGAATGAATTGTTAGGCAAAGACAATGGCAGTTTCAATGGTTTTCTTAAAAGGATTCTAATGGAGATTTCTTTGGCTGTTCCTGTTTTAGGCGCTTCTCGGTTTATATAA
Coding sequence (CDS)
ATGGCTCAGTCTTATGAATCACAGCTGCAAGACGAGGTTCAACCCCTCCTCCGCTCCGGCCACCGTCGACCGTTGCGCCGGTGGATCCATCTGCAGAGGAAGAAGCTGTCAACGGCCCGCCTCGGCGGCAGAAGGCCGCCGCGAGCGGTGGTGATTTGGAGGTCGATTAGGGAAGTTCGAATGAGAAAGTGGATGATGAAGGTCCGATGTGATTGTAAGGTGAAAAAGATGAATGAATTGTTAGGCAAAGACAATGGCAGTTTCAATGGTTTTCTTAAAAGGATTCTAATGGAGATTTCTTTGGCTGTTCCTGTTTTAGGCGCTTCTCGGTTTATATAA
Protein sequence
MAQSYESQLQDEVQPLLRSGHRRPLRRWIHLQRKKLSTARLGGRRPPRAVVIWRSIREVRMRKWMMKVRCDCKVKKMNELLGKDNGSFNGFLKRILMEISLAVPVLGASRFI
Homology
BLAST of CmaCh17G006820 vs. ExPASy TrEMBL
Match:
A0A5A7UTZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001310 PE=4 SV=1)
HSP 1 Score: 128.3 bits (321), Expect = 2.1e-26
Identity = 68/113 (60.18%), Postives = 81/113 (71.68%), Query Frame = 0
Query: 1 MAQSYESQLQDEVQPLLRSGHRRPLRRWIHLQRKKLSTARLGGRRPPRAVVIWRSIREVR 60
M +SY+ + QDE + LLRSG+RRP RRWI L+RKKL TARLGGRRPPR V IWRSI+E++
Sbjct: 1 MRESYKLEAQDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIK 60
Query: 61 MRKW----MMKVRCDCKVKKMNELLGKDNGSFNGFLKRILMEISLAVPVLGAS 110
MRKW MKVRC KD FN FLK+IL+EISLA+P+LG S
Sbjct: 61 MRKWAAMMTMKVRC------------KDIAGFNAFLKKILLEISLAIPLLGVS 101
BLAST of CmaCh17G006820 vs. ExPASy TrEMBL
Match:
A0A0A0KCH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448920 PE=4 SV=1)
HSP 1 Score: 125.6 bits (314), Expect = 1.3e-25
Identity = 66/110 (60.00%), Postives = 79/110 (71.82%), Query Frame = 0
Query: 4 SYESQLQDEVQPLLRSGHRRPLRRWIHLQRKKLSTARLGGRRPPRAVVIWRSIREVRMRK 63
SYE + +DE + LLRSG+RRP RRWI L+RKKL TARLGGRRPPR IWRSI+E++MRK
Sbjct: 5 SYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEIKMRK 64
Query: 64 WMM----KVRCDCKVKKMNELLGKDNGSFNGFLKRILMEISLAVPVLGAS 110
W M KVRC KD SFN FL++IL+EISLA+P+LG S
Sbjct: 65 WAMTMTNKVRC------------KDIASFNAFLRKILLEISLAIPLLGVS 102
BLAST of CmaCh17G006820 vs. ExPASy TrEMBL
Match:
A0A067L0E6 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_24687 PE=4 SV=1)
HSP 1 Score: 65.9 bits (159), Expect = 1.3e-07
Identity = 44/117 (37.61%), Postives = 73/117 (62.39%), Query Frame = 0
Query: 1 MAQSYESQLQDEVQPLLRSGHRRP-LRRWIHLQRKKLSTARLGGRRPPRAVVIWRSIREV 60
MA + E+Q Q+ Q L + R P +RR I L+R+K+ T RLGG++P R + + R ++++
Sbjct: 1 MALNDETQNQNTTQTHLTAASRWPIIRRRISLRRRKMHTVRLGGKKPRRGLFLLRMLKKM 60
Query: 61 RMRKWMMKVRCDCKVKKMNEL---LGKD----NGSFNGFLKRILMEISLAVPVLGAS 110
R+R W +K++ C ++K+ E L KD + + +R++ME SLAVPV+G S
Sbjct: 61 RLR-W-LKLQYSCMLRKLKEYYSNLIKDIVEAGATIESYQQRLVMEASLAVPVMGIS 115
BLAST of CmaCh17G006820 vs. ExPASy TrEMBL
Match:
A0A6J1GVZ8 (uncharacterized protein LOC111458050 OS=Cucurbita moschata OX=3662 GN=LOC111458050 PE=4 SV=1)
HSP 1 Score: 62.8 bits (151), Expect = 1.1e-06
Identity = 45/118 (38.14%), Postives = 68/118 (57.63%), Query Frame = 0
Query: 1 MAQSYESQLQDEVQP--LLRSGHRRPLRRWIHLQRKKLSTARLGGRRPPRAVVIWRSIRE 60
M Q YE +E QP LR G RR RR + +R+++ ARLGG+R R V R +R+
Sbjct: 1 MGQPYE---PEEGQPGAGLRRGTRRGTRRGMRFRRRRMPVARLGGKRSGRLVAWGRMLRK 60
Query: 61 VRMRKWMMKVRCDCKVKKMNELLGK------DNGSF-NGFLKRILMEISLAVPVLGAS 110
+R+R W +K++C VKKM E + + G++ + R+L+E S A+P+LG S
Sbjct: 61 IRLR-W-VKLKCIAMVKKMKEYYTRLMKDIIEAGAYARSYQHRLLLETSFAIPILGVS 113
BLAST of CmaCh17G006820 vs. ExPASy TrEMBL
Match:
A0A2P5EDF5 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_206290 PE=4 SV=1)
HSP 1 Score: 62.0 bits (149), Expect = 1.8e-06
Identity = 40/99 (40.40%), Postives = 59/99 (59.60%), Query Frame = 0
Query: 17 LRSGHRRPLRRWIHLQRKKLSTARLGGRRPPRAVVIWRSIREVRMRKWMM--KVRCDCKV 76
L + +RR R+ I L+R+KL RLGG+RP RAVV+ R +R +R+R+W+ +R K+
Sbjct: 14 LLNPNRRVARQGIPLRRRKLPMVRLGGKRPRRAVVLIRWLRRIRLRRWLKLHYLRMLKKL 73
Query: 77 KKMNELLGKD----NGSFNGFLKRILMEISLAVPVLGAS 110
K+ L KD S F R+ +E S A+PV+G S
Sbjct: 74 KETYRNLVKDMAAAGASLETFHHRVFLESSFALPVMGVS 112
BLAST of CmaCh17G006820 vs. NCBI nr
Match:
KAG6575440.1 (hypothetical protein SDJN03_26079, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 206.1 bits (523), Expect = 1.6e-49
Identity = 102/112 (91.07%), Postives = 105/112 (93.75%), Query Frame = 0
Query: 1 MAQSYESQLQDEVQPLLRSGHRRPLRRWIHLQRKKLSTARLGGRRPPRAVVIWRSIREVR 60
MAQSYESQLQDE QPLL SGHRRPLRRWIHL+RKKLSTARLGGRRPPRA VIWRSIR+VR
Sbjct: 1 MAQSYESQLQDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVR 60
Query: 61 MRKWMMKVRCDCKVKKMNELLGKDNGSFNGFLKRILMEISLAVPVLGASRFI 113
MRKW+MKVRCDCKVKKMNEL KDNG FNGFLKRILMEIS AVPVLGASRFI
Sbjct: 61 MRKWLMKVRCDCKVKKMNELFDKDNGGFNGFLKRILMEISSAVPVLGASRFI 112
BLAST of CmaCh17G006820 vs. NCBI nr
Match:
KAG7013982.1 (hypothetical protein SDJN02_24152, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 204.5 bits (519), Expect = 4.7e-49
Identity = 101/112 (90.18%), Postives = 105/112 (93.75%), Query Frame = 0
Query: 1 MAQSYESQLQDEVQPLLRSGHRRPLRRWIHLQRKKLSTARLGGRRPPRAVVIWRSIREVR 60
MAQSYESQLQDE QPLL SGHRRPLRRWIHL+RKKLSTARLGGRRPPRA VIWRSIR+VR
Sbjct: 1 MAQSYESQLQDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVR 60
Query: 61 MRKWMMKVRCDCKVKKMNELLGKDNGSFNGFLKRILMEISLAVPVLGASRFI 113
MRKW+MKVRCDCKVKK+NEL KDNG FNGFLKRILMEIS AVPVLGASRFI
Sbjct: 61 MRKWLMKVRCDCKVKKINELFDKDNGGFNGFLKRILMEISSAVPVLGASRFI 112
BLAST of CmaCh17G006820 vs. NCBI nr
Match:
KAG6593556.1 (hypothetical protein SDJN03_13032, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 145.6 bits (366), Expect = 2.6e-31
Identity = 77/116 (66.38%), Postives = 86/116 (74.14%), Query Frame = 0
Query: 1 MAQSYESQLQDEVQPLLRSGHRRPLRRWIHLQRKKLSTARLGGRRPPRAVVIWRSIREVR 60
MAQS+ESQ +DE Q LL S HRRP RRWIHL+RK+L RLGG RPPRA WRSI R
Sbjct: 1 MAQSHESQPKDEAQSLLHSSHRRPHRRWIHLRRKRLPIVRLGGERPPRAAAHWRSI---R 60
Query: 61 MRKWMMKVRCDCKVKKMNELLGKDNGS-------FNGFLKRILMEISLAVPVLGAS 110
RKW+MK+RCDC VKK+ +L GK GS F+ FLKRILMEISLAVPVLGAS
Sbjct: 61 FRKWLMKIRCDCLVKKLKQLFGKGTGSGGDGGGGFDAFLKRILMEISLAVPVLGAS 113
BLAST of CmaCh17G006820 vs. NCBI nr
Match:
KAA0059393.1 (hypothetical protein E6C27_scaffold242G001190 [Cucumis melo var. makuwa] >TYK03934.1 hypothetical protein E5676_scaffold347G001310 [Cucumis melo var. makuwa])
HSP 1 Score: 128.3 bits (321), Expect = 4.3e-26
Identity = 68/113 (60.18%), Postives = 81/113 (71.68%), Query Frame = 0
Query: 1 MAQSYESQLQDEVQPLLRSGHRRPLRRWIHLQRKKLSTARLGGRRPPRAVVIWRSIREVR 60
M +SY+ + QDE + LLRSG+RRP RRWI L+RKKL TARLGGRRPPR V IWRSI+E++
Sbjct: 1 MRESYKLEAQDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIK 60
Query: 61 MRKW----MMKVRCDCKVKKMNELLGKDNGSFNGFLKRILMEISLAVPVLGAS 110
MRKW MKVRC KD FN FLK+IL+EISLA+P+LG S
Sbjct: 61 MRKWAAMMTMKVRC------------KDIAGFNAFLKKILLEISLAIPLLGVS 101
BLAST of CmaCh17G006820 vs. NCBI nr
Match:
KAE8646502.1 (hypothetical protein Csa_015773 [Cucumis sativus])
HSP 1 Score: 123.6 bits (309), Expect = 1.1e-24
Identity = 65/108 (60.19%), Postives = 78/108 (72.22%), Query Frame = 0
Query: 4 SYESQLQDEVQPLLRSGHRRPLRRWIHLQRKKLSTARLGGRRPPRAVVIWRSIREVRMRK 63
SYE + +DE + LLRSG+RRP RRWI L+RKKL TARLGGRRPPR IWRSI+E++MRK
Sbjct: 5 SYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEIKMRK 64
Query: 64 WMM----KVRCDCKVKKMNELLGKDNGSFNGFLKRILMEISLAVPVLG 108
W M KVRC KD SFN FL++IL+EISLA+P+LG
Sbjct: 65 WAMTMTNKVRC------------KDIASFNAFLRKILLEISLAIPLLG 100
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7UTZ4 | 2.1e-26 | 60.18 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0KCH4 | 1.3e-25 | 60.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448920 PE=4 SV=1 | [more] |
A0A067L0E6 | 1.3e-07 | 37.61 | Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_24687 PE=4 SV=1 | [more] |
A0A6J1GVZ8 | 1.1e-06 | 38.14 | uncharacterized protein LOC111458050 OS=Cucurbita moschata OX=3662 GN=LOC1114580... | [more] |
A0A2P5EDF5 | 1.8e-06 | 40.40 | Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_206290 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |
KAG6575440.1 | 1.6e-49 | 91.07 | hypothetical protein SDJN03_26079, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7013982.1 | 4.7e-49 | 90.18 | hypothetical protein SDJN02_24152, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6593556.1 | 2.6e-31 | 66.38 | hypothetical protein SDJN03_13032, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAA0059393.1 | 4.3e-26 | 60.18 | hypothetical protein E6C27_scaffold242G001190 [Cucumis melo var. makuwa] >TYK039... | [more] |
KAE8646502.1 | 1.1e-24 | 60.19 | hypothetical protein Csa_015773 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |