CmaCh17G006820 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCAGTCTTATGAATCACAGCTGCAAGACGAGGTTCAACCCCTCCTCCGCTCCGGCCACCGTCGACCGTTGCGCCGGTGGATCCATCTGCAGAGGAAGAAGCTGTCAACGGCCCGCCTCGGCGGCAGAAGGCCGCCGCGAGCGGTGGTGATTTGGAGGTCGATTAGGGAAGTTCGAATGAGAAAGTGGATGATGAAGGTCCGATGTGATTGTAAGGTGAAAAAGATGAATGAATTGTTAGGCAAAGACAATGGCAGTTTCAATGGTTTTCTTAAAAGGATTCTAATGGAGATTTCTTTGGCTGTTCCTGTTTTAGGCGCTTCTCGGTTTATATAA ATGGCTCAGTCTTATGAATCACAGCTGCAAGACGAGGTTCAACCCCTCCTCCGCTCCGGCCACCGTCGACCGTTGCGCCGGTGGATCCATCTGCAGAGGAAGAAGCTGTCAACGGCCCGCCTCGGCGGCAGAAGGCCGCCGCGAGCGGTGGTGATTTGGAGGTCGATTAGGGAAGTTCGAATGAGAAAGTGGATGATGAAGGTCCGATGTGATTGTAAGGTGAAAAAGATGAATGAATTGTTAGGCAAAGACAATGGCAGTTTCAATGGTTTTCTTAAAAGGATTCTAATGGAGATTTCTTTGGCTGTTCCTGTTTTAGGCGCTTCTCGGTTTATATAA ATGGCTCAGTCTTATGAATCACAGCTGCAAGACGAGGTTCAACCCCTCCTCCGCTCCGGCCACCGTCGACCGTTGCGCCGGTGGATCCATCTGCAGAGGAAGAAGCTGTCAACGGCCCGCCTCGGCGGCAGAAGGCCGCCGCGAGCGGTGGTGATTTGGAGGTCGATTAGGGAAGTTCGAATGAGAAAGTGGATGATGAAGGTCCGATGTGATTGTAAGGTGAAAAAGATGAATGAATTGTTAGGCAAAGACAATGGCAGTTTCAATGGTTTTCTTAAAAGGATTCTAATGGAGATTTCTTTGGCTGTTCCTGTTTTAGGCGCTTCTCGGTTTATATAA MAQSYESQLQDEVQPLLRSGHRRPLRRWIHLQRKKLSTARLGGRRPPRAVVIWRSIREVRMRKWMMKVRCDCKVKKMNELLGKDNGSFNGFLKRILMEISLAVPVLGASRFI Homology
BLAST of CmaCh17G006820 vs. ExPASy TrEMBL
Match: A0A5A7UTZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001310 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 2.1e-26 Identity = 68/113 (60.18%), Postives = 81/113 (71.68%), Query Frame = 0
BLAST of CmaCh17G006820 vs. ExPASy TrEMBL
Match: A0A0A0KCH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448920 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 1.3e-25 Identity = 66/110 (60.00%), Postives = 79/110 (71.82%), Query Frame = 0
BLAST of CmaCh17G006820 vs. ExPASy TrEMBL
Match: A0A067L0E6 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_24687 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.3e-07 Identity = 44/117 (37.61%), Postives = 73/117 (62.39%), Query Frame = 0
BLAST of CmaCh17G006820 vs. ExPASy TrEMBL
Match: A0A6J1GVZ8 (uncharacterized protein LOC111458050 OS=Cucurbita moschata OX=3662 GN=LOC111458050 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.1e-06 Identity = 45/118 (38.14%), Postives = 68/118 (57.63%), Query Frame = 0
BLAST of CmaCh17G006820 vs. ExPASy TrEMBL
Match: A0A2P5EDF5 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_206290 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.8e-06 Identity = 40/99 (40.40%), Postives = 59/99 (59.60%), Query Frame = 0
BLAST of CmaCh17G006820 vs. NCBI nr
Match: KAG6575440.1 (hypothetical protein SDJN03_26079, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 206.1 bits (523), Expect = 1.6e-49 Identity = 102/112 (91.07%), Postives = 105/112 (93.75%), Query Frame = 0
BLAST of CmaCh17G006820 vs. NCBI nr
Match: KAG7013982.1 (hypothetical protein SDJN02_24152, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 204.5 bits (519), Expect = 4.7e-49 Identity = 101/112 (90.18%), Postives = 105/112 (93.75%), Query Frame = 0
BLAST of CmaCh17G006820 vs. NCBI nr
Match: KAG6593556.1 (hypothetical protein SDJN03_13032, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 145.6 bits (366), Expect = 2.6e-31 Identity = 77/116 (66.38%), Postives = 86/116 (74.14%), Query Frame = 0
BLAST of CmaCh17G006820 vs. NCBI nr
Match: KAA0059393.1 (hypothetical protein E6C27_scaffold242G001190 [Cucumis melo var. makuwa] >TYK03934.1 hypothetical protein E5676_scaffold347G001310 [Cucumis melo var. makuwa]) HSP 1 Score: 128.3 bits (321), Expect = 4.3e-26 Identity = 68/113 (60.18%), Postives = 81/113 (71.68%), Query Frame = 0
BLAST of CmaCh17G006820 vs. NCBI nr
Match: KAE8646502.1 (hypothetical protein Csa_015773 [Cucumis sativus]) HSP 1 Score: 123.6 bits (309), Expect = 1.1e-24 Identity = 65/108 (60.19%), Postives = 78/108 (72.22%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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