CmaCh17G005880 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G005880
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Pentatricopeptide repeat-containing protein
Location	Cma_Chr17: 4853841 .. 4857125 (+)
RNA-Seq Expression	CmaCh17G005880
Synteny	CmaCh17G005880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCTGATTTCCCCCTTTAAACCCTCCAAAAACCCCAGCAACCTACTATCTCATTTCCAAGTTCCCAGCTGCGCGTAATGAGCAGAAGGGGGTTTAAATCCCTCCACTTTCTCTCACTCTCCTTAATTTCATCCCCAAGTAGATCCAACCCCATCTTCTCCTTTCACCCATTTCCGGTATACTCTGATTCTTTCAGAGCTGCCCTCGCTAACATCACTCTATATCGCCCAACGCTTTCCTCCTCCATTGCCCACTTCTCCACTTCTCCGGACGATCTGCAAGGATTGGTTGATCCGGACGAGTCGTTTCCGTCTGAGAGTTCGCGTGTCGAATGCTTTTCGGCCCCAGAAGTCTCTTTGCTGCGTGATTCTTTATTGGATTCTCATGCCGACTCGCCTTCTTCAGAGCCGACGCTCAAGTCTGGTAAGATTTCAAACGATGCCATTTCGATTTTAGATACAATTTGTAATAGTGATGATGGGTTCGGGGACAAAACCCAAAAATTACTTAGGCAGTTTAGGCAGAATTTGAATCCGGATTTGGTGGTTGAGATTTTGGGTCTTTTGAGAAATCCTGAATTGTGTGTCAAATTCTTTTTATGGGCTGGTCGACAAATTGGTTACAATCATACTGCGTCAGTGTACAATGCGTTGTTAGATGTTTGTGAATGTGGTAGCTATGATCGAGTACCCGAGAAGTTTCTTCGAGAAATTAAGGATGATGACAAAGAGGTGCTTGGGAAGTTGCTTAATGTGTTGATTAGGAAGTGTTGTCGAAATGGGTTTTGGAATGTAGCATTGGAAGAGCTCGGGAGGCTTAAGGACTTTGGATACAAGCCTACCCGGTTAACTTATAATGCTTTAATTCAAGTCTTTCTTAGAGCAGATAAGTTGGACACTGCTTATTTGGTTCATAGAGAAATGTCAGAGTTAGGATTCAATATGGATGAGTTTACTCTTGGTCTTTTTGCTCAAGCTCTCTGCAAAGTGGGCAAATGGAGAGAGGCCCTCTCGTTAATTGAGAAAGAAGATTTTGTCCCTAATACGATTCTTTATACGAAGATGATATCTGGACTGTGCGATGCTTCGTTTTTTGAAGAAGCTATGGATTTTTTGAACAGGATGCGGTCGAGTTCTTGCATCCCTAATGCTCGGACTTATAAGATCTTGCTTTGTGGCTGTTTGAATAAAAAACAGTTGGGTCGATGTAAGAGAATTCTAAGCATGATGATTGCAGAAGGCTGTTTCCCGAGTTATACGATATTTAATTCTCTTGTTCATGCTTATTGCAAAACAGGCGATTTTTCGTATGCTTATAAGTTGCTTAAGAAAATGGAAAAATGTGAATGCAAACCTGGCTATGTGGTTTACAATATCTTAATTGGCGGTATCTGTAATGGTAAAGAATTACCTGGGCCAATTACATTTGAGTTGGCTGAGAAAGCGTACAACGAGATGTGTTCTTCCGGAACTGTTCTAAATAAAGTCAATGTTGTAAGCTTTGCTCGATGCCTTTGCGGCTTTGGGAAATTTGAGAAAGCATATAAAGTAATCCATGAAATGATGGGTAATGGTTTCATTCCTGATACATCTACATATTCTGAAGTGATAGGTTTTATGTGCAATGCCTCAAGGGTAGAAAATGCCTTTTTGCTATTTAAAGAAATGAAAGGGGCTGGTATGGTTCCTGATGTTTATACATACACAATTTTAATTGATTGTTTTTCGAAAGCTGGCCTCATTCAACAAGCTCACAATTGGCTAGACGAAATGGTAAGAGATGGCTGTGAACCTACTGTGGTGACTTATACAACCCTCATCCATGCATATCTTAAGGCTAAGAAGGTTTCGGTCGCTAATGAACTTTTTGAGGTAATGATAGCCAAGGGTTGTATTCCTAATGTTATTACATATACAGCTTTAATTGATGGGTATAGTAAATCAGGGAATATAGAAAACGCTTGCCAGATTTATGCAAGAATGAGAGGTGATGCAGACATTCCCGATGTCGATATGTATTTTAAAACAGAAAATAACGTGTCTGAAAAGCCTAATGTTGTTACGTATGGAGCTTTGGTGGATGGTTTATGCAAGGCCCATAAAGTCAAAGATGCGTGTGACTTATTGGAAACGATGTTTTCGGAAGGCTGTGAACCAAACAACATTGTATATGATGCACTTATTGACGGCTTTTGTAAGGCTGCAAAGTTGGATGAAGCACAAGAGGTGTTTGTTAAGATGGTAGAGCGTGGGTATAACCCTAATGTCTATACTTATAGCTCTCTTATCGATAGATTGTTCAAGGATAAGCGTCTAGATCTTGTATTGAAAGTGTTGTCCAAAATGTTAGAGAATTCTTGTGCTCCTAATGTTGTTATCTATACAGAGATGATTGATGGACTTTGTAAAGTGGCAAAGACAGATGAAGCTTATAAACTTATGTTGATGATGGAAGAGAAGGGATGTAAACCAAATGTTGTGACCTACACTGCAATGATTGATGGCTTTGGGAAAGCTGGTAAAGTTGACAAATGCCTCGAGCTTTTCAGGGAAATGGGCTCGAAAGGCTGTTCTCCAAATTTTGTCACCTACACCGTGTTGATCAACCATTGCTGTGCTTCTGGCTGTTTAGATGAGGCCTATGCACTTTTGGATGAAATGAAACAAACATACTGGCCGAAACATGTATCGAGCTACTGTAAGGTTGTTGAAGGCTATAACCGGGAGTTCATTCTCTCTCTCGGGATCTTAGAGGAAGTGGAAAAGAATGATGCTACCCCAATTATTCTGCTGTACAGGGTTTTGATTGATAACTTTGTTAAGGCAGGAAGACTGGAAGTGGCACTGGAGCTCCACAAAGAGGTTATATCAGCTTCAATGTCTATGGCTGCTAAGAAAAATATGTACACAACTTTGATTTACAGCTTTTCTAAGGCAATGAAGATTGATCAGGCATTCGAGTTATATAATGATATGATAAGACAGGGTGTTATTCCAGATCTTGGTACATTTGTCCATCTTATTATGGGGCTCGTCAAAGTTAGCAGGTGGGAAGAAGCACTCCAGTTGTCAGATAGCATATGTCAAATGGTATGTGTCTTGACCACTCTGATTTCTTTTAACTTTTATGTGTTTCTTTTGTTGTGTTGTTCAAATATTTTCATCTAGCTAGTTTAGACATATACGGTCAAAAGTTCGAATCTCCAAACCTCAAGTGTTGTTGAACTCAAAAAATATTTTCATATAGCAGGATATCAATTGGTTGCAACGAGAAGACGCACCTTGA

mRNA sequence

GTTCTGATTTCCCCCTTTAAACCCTCCAAAAACCCCAGCAACCTACTATCTCATTTCCAAGTTCCCAGCTGCGCGTAATGAGCAGAAGGGGGTTTAAATCCCTCCACTTTCTCTCACTCTCCTTAATTTCATCCCCAAGTAGATCCAACCCCATCTTCTCCTTTCACCCATTTCCGGTATACTCTGATTCTTTCAGAGCTGCCCTCGCTAACATCACTCTATATCGCCCAACGCTTTCCTCCTCCATTGCCCACTTCTCCACTTCTCCGGACGATCTGCAAGGATTGGTTGATCCGGACGAGTCGTTTCCGTCTGAGAGTTCGCGTGTCGAATGCTTTTCGGCCCCAGAAGTCTCTTTGCTGCGTGATTCTTTATTGGATTCTCATGCCGACTCGCCTTCTTCAGAGCCGACGCTCAAGTCTGGTAAGATTTCAAACGATGCCATTTCGATTTTAGATACAATTTGTAATAGTGATGATGGGTTCGGGGACAAAACCCAAAAATTACTTAGGCAGTTTAGGCAGAATTTGAATCCGGATTTGGTGGTTGAGATTTTGGGTCTTTTGAGAAATCCTGAATTGTGTGTCAAATTCTTTTTATGGGCTGGTCGACAAATTGGTTACAATCATACTGCGTCAGTGTACAATGCGTTGTTAGATGTTTGTGAATGTGGTAGCTATGATCGAGTACCCGAGAAGTTTCTTCGAGAAATTAAGGATGATGACAAAGAGGTGCTTGGGAAGTTGCTTAATGTGTTGATTAGGAAGTGTTGTCGAAATGGGTTTTGGAATGTAGCATTGGAAGAGCTCGGGAGGCTTAAGGACTTTGGATACAAGCCTACCCGGTTAACTTATAATGCTTTAATTCAAGTCTTTCTTAGAGCAGATAAGTTGGACACTGCTTATTTGGTTCATAGAGAAATGTCAGAGTTAGGATTCAATATGGATGAGTTTACTCTTGGTCTTTTTGCTCAAGCTCTCTGCAAAGTGGGCAAATGGAGAGAGGCCCTCTCGTTAATTGAGAAAGAAGATTTTGTCCCTAATACGATTCTTTATACGAAGATGATATCTGGACTGTGCGATGCTTCGTTTTTTGAAGAAGCTATGGATTTTTTGAACAGGATGCGGTCGAGTTCTTGCATCCCTAATGCTCGGACTTATAAGATCTTGCTTTGTGGCTGTTTGAATAAAAAACAGTTGGGTCGATGTAAGAGAATTCTAAGCATGATGATTGCAGAAGGCTGTTTCCCGAGTTATACGATATTTAATTCTCTTGTTCATGCTTATTGCAAAACAGGCGATTTTTCGTATGCTTATAAGTTGCTTAAGAAAATGGAAAAATGTGAATGCAAACCTGGCTATGTGGTTTACAATATCTTAATTGGCGGTATCTGTAATGGTAAAGAATTACCTGGGCCAATTACATTTGAGTTGGCTGAGAAAGCGTACAACGAGATGTGTTCTTCCGGAACTGTTCTAAATAAAGTCAATGTTGTAAGCTTTGCTCGATGCCTTTGCGGCTTTGGGAAATTTGAGAAAGCATATAAAGTAATCCATGAAATGATGGGTAATGGTTTCATTCCTGATACATCTACATATTCTGAAGTGATAGGTTTTATGTGCAATGCCTCAAGGGTAGAAAATGCCTTTTTGCTATTTAAAGAAATGAAAGGGGCTGGTATGGTTCCTGATGTTTATACATACACAATTTTAATTGATTGTTTTTCGAAAGCTGGCCTCATTCAACAAGCTCACAATTGGCTAGACGAAATGGTAAGAGATGGCTGTGAACCTACTGTGGTGACTTATACAACCCTCATCCATGCATATCTTAAGGCTAAGAAGGTTTCGGTCGCTAATGAACTTTTTGAGGTAATGATAGCCAAGGGTTGTATTCCTAATGTTATTACATATACAGCTTTAATTGATGGGTATAGTAAATCAGGGAATATAGAAAACGCTTGCCAGATTTATGCAAGAATGAGAGGTGATGCAGACATTCCCGATGTCGATATGTATTTTAAAACAGAAAATAACGTGTCTGAAAAGCCTAATGTTGTTACGTATGGAGCTTTGGTGGATGGTTTATGCAAGGCCCATAAAGTCAAAGATGCGTGTGACTTATTGGAAACGATGTTTTCGGAAGGCTGTGAACCAAACAACATTGTATATGATGCACTTATTGACGGCTTTTGTAAGGCTGCAAAGTTGGATGAAGCACAAGAGGTGTTTGTTAAGATGGTAGAGCGTGGGTATAACCCTAATGTCTATACTTATAGCTCTCTTATCGATAGATTGTTCAAGGATAAGCGTCTAGATCTTGTATTGAAAGTGTTGTCCAAAATGTTAGAGAATTCTTGTGCTCCTAATGTTGTTATCTATACAGAGATGATTGATGGACTTTGTAAAGTGGCAAAGACAGATGAAGCTTATAAACTTATGTTGATGATGGAAGAGAAGGGATGTAAACCAAATGTTGTGACCTACACTGCAATGATTGATGGCTTTGGGAAAGCTGGTAAAGTTGACAAATGCCTCGAGCTTTTCAGGGAAATGGGCTCGAAAGGCTGTTCTCCAAATTTTGTCACCTACACCGTGTTGATCAACCATTGCTGTGCTTCTGGCTGTTTAGATGAGGCCTATGCACTTTTGGATGAAATGAAACAAACATACTGGCCGAAACATGTATCGAGCTACTGTAAGGTTGTTGAAGGCTATAACCGGGAGTTCATTCTCTCTCTCGGGATCTTAGAGGAAGTGGAAAAGAATGATGCTACCCCAATTATTCTGCTGTACAGGGTTTTGATTGATAACTTTGTTAAGGCAGGAAGACTGGAAGTGGCACTGGAGCTCCACAAAGAGGTTATATCAGCTTCAATGTCTATGGCTGCTAAGAAAAATATGTACACAACTTTGATTTACAGCTTTTCTAAGGCAATGAAGATTGATCAGGCATTCGAGTTATATAATGATATGATAAGACAGGGTGTTATTCCAGATCTTGGTACATTTGTCCATCTTATTATGGGGCTCGTCAAAGTTAGCAGGTGGGAAGAAGCACTCCAGTTGTCAGATAGCATATGTCAAATGGATATCAATTGGTTGCAACGAGAAGACGCACCTTGA

Coding sequence (CDS)

ATGAGCAGAAGGGGGTTTAAATCCCTCCACTTTCTCTCACTCTCCTTAATTTCATCCCCAAGTAGATCCAACCCCATCTTCTCCTTTCACCCATTTCCGGTATACTCTGATTCTTTCAGAGCTGCCCTCGCTAACATCACTCTATATCGCCCAACGCTTTCCTCCTCCATTGCCCACTTCTCCACTTCTCCGGACGATCTGCAAGGATTGGTTGATCCGGACGAGTCGTTTCCGTCTGAGAGTTCGCGTGTCGAATGCTTTTCGGCCCCAGAAGTCTCTTTGCTGCGTGATTCTTTATTGGATTCTCATGCCGACTCGCCTTCTTCAGAGCCGACGCTCAAGTCTGGTAAGATTTCAAACGATGCCATTTCGATTTTAGATACAATTTGTAATAGTGATGATGGGTTCGGGGACAAAACCCAAAAATTACTTAGGCAGTTTAGGCAGAATTTGAATCCGGATTTGGTGGTTGAGATTTTGGGTCTTTTGAGAAATCCTGAATTGTGTGTCAAATTCTTTTTATGGGCTGGTCGACAAATTGGTTACAATCATACTGCGTCAGTGTACAATGCGTTGTTAGATGTTTGTGAATGTGGTAGCTATGATCGAGTACCCGAGAAGTTTCTTCGAGAAATTAAGGATGATGACAAAGAGGTGCTTGGGAAGTTGCTTAATGTGTTGATTAGGAAGTGTTGTCGAAATGGGTTTTGGAATGTAGCATTGGAAGAGCTCGGGAGGCTTAAGGACTTTGGATACAAGCCTACCCGGTTAACTTATAATGCTTTAATTCAAGTCTTTCTTAGAGCAGATAAGTTGGACACTGCTTATTTGGTTCATAGAGAAATGTCAGAGTTAGGATTCAATATGGATGAGTTTACTCTTGGTCTTTTTGCTCAAGCTCTCTGCAAAGTGGGCAAATGGAGAGAGGCCCTCTCGTTAATTGAGAAAGAAGATTTTGTCCCTAATACGATTCTTTATACGAAGATGATATCTGGACTGTGCGATGCTTCGTTTTTTGAAGAAGCTATGGATTTTTTGAACAGGATGCGGTCGAGTTCTTGCATCCCTAATGCTCGGACTTATAAGATCTTGCTTTGTGGCTGTTTGAATAAAAAACAGTTGGGTCGATGTAAGAGAATTCTAAGCATGATGATTGCAGAAGGCTGTTTCCCGAGTTATACGATATTTAATTCTCTTGTTCATGCTTATTGCAAAACAGGCGATTTTTCGTATGCTTATAAGTTGCTTAAGAAAATGGAAAAATGTGAATGCAAACCTGGCTATGTGGTTTACAATATCTTAATTGGCGGTATCTGTAATGGTAAAGAATTACCTGGGCCAATTACATTTGAGTTGGCTGAGAAAGCGTACAACGAGATGTGTTCTTCCGGAACTGTTCTAAATAAAGTCAATGTTGTAAGCTTTGCTCGATGCCTTTGCGGCTTTGGGAAATTTGAGAAAGCATATAAAGTAATCCATGAAATGATGGGTAATGGTTTCATTCCTGATACATCTACATATTCTGAAGTGATAGGTTTTATGTGCAATGCCTCAAGGGTAGAAAATGCCTTTTTGCTATTTAAAGAAATGAAAGGGGCTGGTATGGTTCCTGATGTTTATACATACACAATTTTAATTGATTGTTTTTCGAAAGCTGGCCTCATTCAACAAGCTCACAATTGGCTAGACGAAATGGTAAGAGATGGCTGTGAACCTACTGTGGTGACTTATACAACCCTCATCCATGCATATCTTAAGGCTAAGAAGGTTTCGGTCGCTAATGAACTTTTTGAGGTAATGATAGCCAAGGGTTGTATTCCTAATGTTATTACATATACAGCTTTAATTGATGGGTATAGTAAATCAGGGAATATAGAAAACGCTTGCCAGATTTATGCAAGAATGAGAGGTGATGCAGACATTCCCGATGTCGATATGTATTTTAAAACAGAAAATAACGTGTCTGAAAAGCCTAATGTTGTTACGTATGGAGCTTTGGTGGATGGTTTATGCAAGGCCCATAAAGTCAAAGATGCGTGTGACTTATTGGAAACGATGTTTTCGGAAGGCTGTGAACCAAACAACATTGTATATGATGCACTTATTGACGGCTTTTGTAAGGCTGCAAAGTTGGATGAAGCACAAGAGGTGTTTGTTAAGATGGTAGAGCGTGGGTATAACCCTAATGTCTATACTTATAGCTCTCTTATCGATAGATTGTTCAAGGATAAGCGTCTAGATCTTGTATTGAAAGTGTTGTCCAAAATGTTAGAGAATTCTTGTGCTCCTAATGTTGTTATCTATACAGAGATGATTGATGGACTTTGTAAAGTGGCAAAGACAGATGAAGCTTATAAACTTATGTTGATGATGGAAGAGAAGGGATGTAAACCAAATGTTGTGACCTACACTGCAATGATTGATGGCTTTGGGAAAGCTGGTAAAGTTGACAAATGCCTCGAGCTTTTCAGGGAAATGGGCTCGAAAGGCTGTTCTCCAAATTTTGTCACCTACACCGTGTTGATCAACCATTGCTGTGCTTCTGGCTGTTTAGATGAGGCCTATGCACTTTTGGATGAAATGAAACAAACATACTGGCCGAAACATGTATCGAGCTACTGTAAGGTTGTTGAAGGCTATAACCGGGAGTTCATTCTCTCTCTCGGGATCTTAGAGGAAGTGGAAAAGAATGATGCTACCCCAATTATTCTGCTGTACAGGGTTTTGATTGATAACTTTGTTAAGGCAGGAAGACTGGAAGTGGCACTGGAGCTCCACAAAGAGGTTATATCAGCTTCAATGTCTATGGCTGCTAAGAAAAATATGTACACAACTTTGATTTACAGCTTTTCTAAGGCAATGAAGATTGATCAGGCATTCGAGTTATATAATGATATGATAAGACAGGGTGTTATTCCAGATCTTGGTACATTTGTCCATCTTATTATGGGGCTCGTCAAAGTTAGCAGGTGGGAAGAAGCACTCCAGTTGTCAGATAGCATATGTCAAATGGATATCAATTGGTTGCAACGAGAAGACGCACCTTGA

Protein sequence

MSRRGFKSLHFLSLSLISSPSRSNPIFSFHPFPVYSDSFRAALANITLYRPTLSSSIAHFSTSPDDLQGLVDPDESFPSESSRVECFSAPEVSLLRDSLLDSHADSPSSEPTLKSGKISNDAISILDTICNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQIGYNHTASVYNALLDVCECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVALEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQALCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNARTYKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKTGDFSYAYKLLKKMEKCECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVYTYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVMIAKGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIPDVDMYFKTENNVSEKPNVVTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVFVKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTVLINHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGILEEVEKNDATPIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQAFELYNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEALQLSDSICQMDINWLQREDAP

Homology

[Close]

BLAST of CmaCh17G005880 vs. ExPASy Swiss-Prot
Match: Q9M9X9 (Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g06710 PE=3 SV=1)

HSP 1 Score: 1194.5 bits (3089), Expect = 0.0e+00
Identity = 581/942 (61.68%), Postives = 720/942 (76.43%), Query Frame = 0


Query: 64   PDDLQGLVDPDESFPSESSRVECFSAPEVSLLRDSLLD-SHADSPSSEPTLKSGKISNDA 123
            PDD+ G  DP   F    SR       E S L DSL+D  + +     P +    I  DA
Sbjct: 47   PDDMFGFDDP---FSPSDSREVVDLTKEYSFLHDSLVDYGNVNVHQVVPIITQSSI--DA 106

Query: 124  ISILDTICNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQIGY 183
             +I D +   DD FG K+QK LRQFR+ L+  LV+E+L L+  P   + FF+WAGRQIGY
Sbjct: 107  RAIADAVSGVDDVFGRKSQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGY 166

Query: 184  NHTASVYNALLDVCECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVALE 243
             HTA VYNAL+D+      ++VPE+FL++I+DDDKEV G+ LNVL+RK CRNG +++ALE
Sbjct: 167  KHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALE 226

Query: 244  ELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQALC 303
            ELGRLKDF ++P+R TYN LIQ FL+AD+LD+A L+HREMS     MD FTL  FA +LC
Sbjct: 227  ELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLC 286

Query: 304  KVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNARTYK 363
            KVGKWREAL+L+E E+FVP+T+ YTK+ISGLC+AS FEEAMDFLNRMR++SC+PN  TY 
Sbjct: 287  KVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYS 346

Query: 364  ILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKTGDFSYAYKLLKKMEKC 423
             LLCGCLNKKQLGRCKR+L+MM+ EGC+PS  IFNSLVHAYC +GD SYAYKLLKKM KC
Sbjct: 347  TLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKC 406

Query: 424  ECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLCGF 483
               PGYVVYNILIG IC  K+       +LAEKAY+EM ++G VLNK+NV SF RCLC  
Sbjct: 407  GHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSA 466

Query: 484  GKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVYTY 543
            GK+EKA+ VI EM+G GFIPDTSTYS+V+ ++CNAS++E AFLLF+EMK  G+V DVYTY
Sbjct: 467  GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 526

Query: 544  TILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVMIA 603
            TI++D F KAGLI+QA  W +EM   GC P VVTYT LIHAYLKAKKVS ANELFE M++
Sbjct: 527  TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 586

Query: 604  KGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIPDVDMYFKTENNVSEKPNVVT 663
            +GC+PN++TY+ALIDG+ K+G +E ACQI+ RM G  D+PDVDMYFK  ++ SE+PNVVT
Sbjct: 587  EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT 646

Query: 664  YGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVFVKMV 723
            YGAL+DG CK+H+V++A  LL+ M  EGCEPN IVYDALIDG CK  KLDEAQEV  +M 
Sbjct: 647  YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 706

Query: 724  ERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAKTD 783
            E G+   +YTYSSLIDR FK KR DL  KVLSKMLENSCAPNVVIYTEMIDGLCKV KTD
Sbjct: 707  EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 766

Query: 784  EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTVLI 843
            EAYKLM MMEEKGC+PNVVTYTAMIDGFG  GK++ CLEL   MGSKG +PN+VTY VLI
Sbjct: 767  EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 826

Query: 844  NHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGILEEVEKNDATPI 903
            +HCC +G LD A+ LL+EMKQT+WP H + Y KV+EG+N+EFI SLG+L+E+ ++D  P 
Sbjct: 827  DHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPF 886

Query: 904  ILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQAFEL 963
            + +YR+LIDN +KA RLE+AL L +EV + S ++    + Y +LI S   A K++ AF+L
Sbjct: 887  LSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQL 946

Query: 964  YNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEALQLSDSICQM 1005
            +++M ++GVIP++ +F  LI GL + S+  EAL L D I  M
Sbjct: 947  FSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHM 983

[Close]

BLAST of CmaCh17G005880 vs. ExPASy Swiss-Prot
Match: Q9SZ52 (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR3 PE=1 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.5e-80
Identity = 226/824 (27.43%), Postives = 372/824 (45.15%), Query Frame = 0


Query: 226  VLIRKCCRNGFWNVALEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSEL 285
            + IR   R G  N A E L R+ D G  P  +TY  LI     A KLD A  V  +M   
Sbjct: 263  ICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTG 322

Query: 286  GFNMDEFT----LGLFAQALCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEE 345
                D  T    L  F+     +   ++  S +EK+  VP+ + +T ++  LC A  F E
Sbjct: 323  RHKPDRVTYITLLDRFSDNR-DLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGE 382

Query: 346  AMDFLNRMRSSSCIPNARTYKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVH 405
            A D L+ MR    +PN  TY  L+CG L   +L     +   M + G  P+   +   + 
Sbjct: 383  AFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFID 442

Query: 406  AYCKTGDFSYAYKLLKKMEKCECKPGYVVYNILIGGICN-GKELPGPITFELAEKAYNEM 465
             Y K+GD   A +  +KM+     P  V  N  +  +   G++         A++ +  +
Sbjct: 443  YYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRD-------REAKQIFYGL 502

Query: 466  CSSGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRV 525
               G V + V      +C    G+ ++A K++ EMM NG  PD    + +I  +  A RV
Sbjct: 503  KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 562

Query: 526  ENAFLLFKEMKGAGMVPDVYTYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTL 585
            + A+ +F  MK   + P V TY  L+    K G IQ+A    + MV+ GC P  +T+ TL
Sbjct: 563  DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 622

Query: 586  IHAYLKAKKVSVANELFEVMIAKGCIPNVITYTALIDGYSKSGNIENACQIYARMR---- 645
                 K  +V++A ++   M+  GC+P+V TY  +I G  K+G ++ A   + +M+    
Sbjct: 623  FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY 682

Query: 646  -------------------------------GDADIPDVDMYFK-----------TENNV 705
                                             AD P  +++++            +N V
Sbjct: 683  PDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQP-ANLFWEDLIGSILAEAGIDNAV 742

Query: 706  SEKPNVVTYGALVDG----------LCKAHKVKDACDLLETMFSE-GCEPNNIVYDALID 765
            S    +V  G   DG           CK + V  A  L E    + G +P    Y+ LI 
Sbjct: 743  SFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIG 802

Query: 766  GFCKAAKLDEAQEVFVKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAP 825
            G  +A  ++ AQ+VF+++   G  P+V TY+ L+D   K  ++D + ++  +M  + C  
Sbjct: 803  GLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEA 862

Query: 826  NVVIYTEMIDGLCKVAKTDEAYKLML-MMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLEL 885
            N + +  +I GL K    D+A  L   +M ++   P   TY  +IDG  K+G++ +  +L
Sbjct: 863  NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL 922

Query: 886  FREMGSKGCSPNFVTYTVLINHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNR 945
            F  M   GC PN   Y +LIN    +G  D A AL   M +      + +Y  +V+    
Sbjct: 923  FEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 982

Query: 946  EFILSLGI--LEEVEKNDATPIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKK 985
               +  G+   +E++++   P ++ Y ++I+   K+ RLE AL L  E +  S  +    
Sbjct: 983  VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE-MKTSRGITPDL 1042

[Close]

BLAST of CmaCh17G005880 vs. ExPASy Swiss-Prot
Match: Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 1.2e-77
Identity = 195/737 (26.46%), Postives = 339/737 (46.00%), Query Frame = 0


Query: 290  DEFTLGLFAQALCKVGKWR---EALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDF- 349
            D  T G+     C+ G+      AL  + K+ F  + I +T ++ GLC      +AMD  
Sbjct: 86   DLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 145

Query: 350  LNRMRSSSCIPNARTYKILLCGCLNKKQLGRCKRILSMMIAE---GCFPSYTIFNSLVHA 409
            L RM    CIPN  +Y ILL G  ++ +      +L MM  +   G  P    + ++++ 
Sbjct: 146  LRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVING 205

Query: 410  YCKTGDFSYAYKLLKKMEKCECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCS 469
            + K GD   AY    +M      P  V YN +I  +C  + +                  
Sbjct: 206  FFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM------------------ 265

Query: 470  SGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVEN 529
                                   +KA +V++ M+ NG +PD  TY+ ++   C++ + + 
Sbjct: 266  -----------------------DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKE 325

Query: 530  AFLLFKEMKGAGMVPDVYTYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIH 589
            A    K+M+  G+ PDV TY++L+D   K G   +A    D M + G +P + TY TL+ 
Sbjct: 326  AIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQ 385

Query: 590  AYLKAKKVSVANELFEVMIAKGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIP 649
             Y     +   + L ++M+  G  P+   ++ LI  Y+K G ++ A  ++++MR      
Sbjct: 386  GYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMR------ 445

Query: 650  DVDMYFKTENNVSEKPNVVTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALI 709
                           PN VTYGA++  LCK+ +V+DA    E M  EG  P NIVY++LI
Sbjct: 446  ----------QQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 505

Query: 710  DGFCKAAKLDEAQEVFVKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCA 769
             G C   K + A+E+ ++M++RG   N   ++S+ID   K+ R+    K+   M+     
Sbjct: 506  HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 565

Query: 770  PNVVIYTEMIDGLCKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLEL 829
            PNV+ Y  +I+G C   K DEA KL+  M   G KPN VTY+ +I+G+ K  +++  L L
Sbjct: 566  PNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVL 625

Query: 830  FREMGSKGCSPNFVTYTVLINHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNR 889
            F+EM S G SP+ +TY +++               L + ++T   K +  Y ++ E    
Sbjct: 626  FKEMESSGVSPDIITYNIILQG-------------LFQTRRTAAAKEL--YVRITESGT- 685

Query: 890  EFILSLGILEEVEKNDATPIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNM 949
                      ++E       +  Y +++    K    + AL++ + +    + + A+   
Sbjct: 686  ----------QIE-------LSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEAR--T 730

Query: 950  YTTLIYSFSKAMKIDQAFELYNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEA----LQLS 1009
            +  +I +  K  + D+A +L+      G++P+  T+  +   ++     EE     L + 
Sbjct: 746  FNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 730

Query: 1010 DSICQMD---INWLQRE 1013
            D+ C +D   +N++ RE
Sbjct: 806  DNGCTVDSGMLNFIVRE 730

[Close]

BLAST of CmaCh17G005880 vs. ExPASy Swiss-Prot
Match: Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 285.4 bits (729), Expect = 2.5e-75
Identity = 167/640 (26.09%), Postives = 285/640 (44.53%), Query Frame = 0


Query: 230 KCCRNGFWNVALEE----LGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSEL 289
           K  RNG   + L++     G +      P+ + ++ L+    + +K D    +  +M  L
Sbjct: 51  KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110

Query: 290 GFNMDEFTLGLFAQALCKVGKWREALSLIEKE---DFVPNTILYTKMISGLCDASFFEEA 349
           G   + +T  +     C+  +   AL+++ K     + PN +  + +++G C +    EA
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170

Query: 350 MDFLNRMRSSSCIPNARTYKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHA 409
           +  +++M  +   PN  T+  L+ G     +      ++  M+A+GC P    +  +V+ 
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230

Query: 410 YCKTGDFSYAYKLLKKMEKCECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCS 469
            CK GD   A+ LL KME+ + +PG ++YN +I G+C  K +                  
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM------------------ 290

Query: 470 SGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVEN 529
                                  + A  +  EM   G  P+  TYS +I  +CN  R  +
Sbjct: 291 -----------------------DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 350

Query: 530 AFLLFKEMKGAGMVPDVYTYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIH 589
           A  L  +M    + PDV+T++ LID F K G + +A    DEMV+   +P++VTY++LI+
Sbjct: 351 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 410

Query: 590 AYLKAKKVSVANELFEVMIAKGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIP 649
            +    ++  A ++FE M++K C P+V+TY  LI G+                       
Sbjct: 411 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF----------------------- 470

Query: 650 DVDMYFKTENNVSEKPNVVTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALI 709
                                       CK  +V++  ++   M   G   N + Y+ LI
Sbjct: 471 ----------------------------CKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 530

Query: 710 DGFCKAAKLDEAQEVFVKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCA 769
            G  +A   D AQE+F +MV  G  PN+ TY++L+D L K+ +L+  + V   +  +   
Sbjct: 531 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 590

Query: 770 PNVVIYTEMIDGLCKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLEL 829
           P +  Y  MI+G+CK  K ++ + L   +  KG KP+VV Y  MI GF + G  ++   L
Sbjct: 591 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 598

Query: 830 FREMGSKGCSPNFVTYTVLINHCCASGCLDEAYALLDEMK 863
           F+EM   G  PN   Y  LI      G  + +  L+ EM+
Sbjct: 651 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598

[Close]

BLAST of CmaCh17G005880 vs. ExPASy Swiss-Prot
Match: Q9FJE6 (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 3.3e-75
Identity = 206/721 (28.57%), Postives = 330/721 (45.77%), Query Frame = 0


Query: 313  LIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNARTYKILLCGCLNKK 372
            +I K   +P     + ++ GL     F  AM+  N M S    P+   Y  ++      K
Sbjct: 182  MITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELK 241

Query: 373  QLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKTGDFSYAYKLLKKMEKCECKPGYVVYN 432
             L R K +++ M A GC  +   +N L+   CK      A  + K +   + KP  V Y 
Sbjct: 242  DLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYC 301

Query: 433  ILIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLCGFGKFEKAYKVI 492
             L+ G+C  +E      FE+  +  +EM       ++  V S    L   GK E+A  ++
Sbjct: 302  TLVYGLCKVQE------FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLV 361

Query: 493  HEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVYTYTILIDCFSKA 552
              ++  G  P+   Y+ +I  +C   +   A LLF  M   G+ P+  TY+ILID F + 
Sbjct: 362  KRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRR 421

Query: 553  GLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVMIAKGCIPNVITY 612
            G +  A ++L EMV  G + +V  Y +LI+ + K   +S A      MI K   P V+TY
Sbjct: 422  GKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTY 481

Query: 613  TALIDGYSKSGNIENACQIYARMRGDADIPDVDMY----------------FKTENNVSE 672
            T+L+ GY   G I  A ++Y  M G    P +  +                 K  N ++E
Sbjct: 482  TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 541

Query: 673  ---KPNVVTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDE 732
               KPN VTY  +++G C+   +  A + L+ M  +G  P+   Y  LI G C   +  E
Sbjct: 542  WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 601

Query: 733  AQEVFVKMVERG-YNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMI 792
            A +VFV  + +G    N   Y+ L+    ++ +L+  L V  +M++     ++V Y  +I
Sbjct: 602  A-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 661

Query: 793  DGLCKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCS 852
            DG  K       + L+  M ++G KP+ V YT+MID   K G   +   ++  M ++GC 
Sbjct: 662  DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 721

Query: 853  PNFVTYTVLINHCCASGCLDEAYALLDEMKQ-TYWPKHVSSYC------KVVEGYNREFI 912
            PN VTYT +IN  C +G ++EA  L  +M+  +  P  V+  C      K      +   
Sbjct: 722  PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE 781

Query: 913  LSLGILEEVEKNDATPIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTT 972
            L   IL+ +  N AT     Y +LI  F + GR+E A EL   +I   +S       YTT
Sbjct: 782  LHNAILKGLLANTAT-----YNMLIRGFCRQGRIEEASELITRMIGDGVSPDC--ITYTT 841

Query: 973  LIYSFSKAMKIDQAFELYNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEALQLSDSICQMD 1007
            +I    +   + +A EL+N M  +G+ PD   +  LI G        +A +L + + +  
Sbjct: 842  MINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 888

[Close]

BLAST of CmaCh17G005880 vs. ExPASy TrEMBL
Match: A0A6J1JSJ3 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111488532 PE=4 SV=1)

HSP 1 Score: 2063.5 bits (5345), Expect = 0.0e+00
Identity = 1015/1015 (100.00%), Postives = 1015/1015 (100.00%), Query Frame = 0


Query: 1    MSRRGFKSLHFLSLSLISSPSRSNPIFSFHPFPVYSDSFRAALANITLYRPTLSSSIAHF 60
            MSRRGFKSLHFLSLSLISSPSRSNPIFSFHPFPVYSDSFRAALANITLYRPTLSSSIAHF
Sbjct: 1    MSRRGFKSLHFLSLSLISSPSRSNPIFSFHPFPVYSDSFRAALANITLYRPTLSSSIAHF 60

Query: 61   STSPDDLQGLVDPDESFPSESSRVECFSAPEVSLLRDSLLDSHADSPSSEPTLKSGKISN 120
            STSPDDLQGLVDPDESFPSESSRVECFSAPEVSLLRDSLLDSHADSPSSEPTLKSGKISN
Sbjct: 61   STSPDDLQGLVDPDESFPSESSRVECFSAPEVSLLRDSLLDSHADSPSSEPTLKSGKISN 120

Query: 121  DAISILDTICNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQI 180
            DAISILDTICNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQI
Sbjct: 121  DAISILDTICNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQI 180

Query: 181  GYNHTASVYNALLDVCECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVA 240
            GYNHTASVYNALLDVCECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVA
Sbjct: 181  GYNHTASVYNALLDVCECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVA 240

Query: 241  LEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQA 300
            LEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQA
Sbjct: 241  LEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQA 300

Query: 301  LCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNART 360
            LCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNART
Sbjct: 301  LCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNART 360

Query: 361  YKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKTGDFSYAYKLLKKME 420
            YKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKTGDFSYAYKLLKKME
Sbjct: 361  YKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKTGDFSYAYKLLKKME 420

Query: 421  KCECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLC 480
            KCECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLC
Sbjct: 421  KCECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLC 480

Query: 481  GFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVY 540
            GFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVY
Sbjct: 481  GFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVY 540

Query: 541  TYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVM 600
            TYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVM
Sbjct: 541  TYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVM 600

Query: 601  IAKGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIPDVDMYFKTENNVSEKPNV 660
            IAKGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIPDVDMYFKTENNVSEKPNV
Sbjct: 601  IAKGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIPDVDMYFKTENNVSEKPNV 660

Query: 661  VTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVFVK 720
            VTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVFVK
Sbjct: 661  VTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVFVK 720

Query: 721  MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAK 780
            MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAK
Sbjct: 721  MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAK 780

Query: 781  TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTV 840
            TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTV
Sbjct: 781  TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTV 840

Query: 841  LINHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGILEEVEKNDAT 900
            LINHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGILEEVEKNDAT
Sbjct: 841  LINHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGILEEVEKNDAT 900

Query: 901  PIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQAF 960
            PIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQAF
Sbjct: 901  PIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQAF 960

Query: 961  ELYNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEALQLSDSICQMDINWLQREDAP 1016
            ELYNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEALQLSDSICQMDINWLQREDAP
Sbjct: 961  ELYNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEALQLSDSICQMDINWLQREDAP 1015

[Close]

BLAST of CmaCh17G005880 vs. ExPASy TrEMBL
Match: A0A6J1EVK3 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111436368 PE=4 SV=1)

HSP 1 Score: 2000.3 bits (5181), Expect = 0.0e+00
Identity = 988/1014 (97.44%), Postives = 994/1014 (98.03%), Query Frame = 0


Query: 1    MSRRGFKSLHFLSLSLISSPSRSNPIFSFHPFPVYSDSFRAALANITLYRPTLSSSIAHF 60
            MSRRG KSLHFLSLSLISSP RSNPIFSFHPFPVYSDSFRAAL NITLYRPT SSSIAHF
Sbjct: 1    MSRRGLKSLHFLSLSLISSPIRSNPIFSFHPFPVYSDSFRAALPNITLYRPTPSSSIAHF 60

Query: 61   STSPDDLQGLVDPDESFPSESSRVECFSAPEVSLLRDSLLDSHADSPSSEPTLKSGKISN 120
            STSPDDLQGLVDPDES PSE SR ECFSAPEVSLLR SLLDSHADSPSSEPTLKSGKISN
Sbjct: 61   STSPDDLQGLVDPDESLPSEGSRAECFSAPEVSLLRGSLLDSHADSPSSEPTLKSGKISN 120

Query: 121  DAISILDTICNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQI 180
            DAISILDTI NSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQI
Sbjct: 121  DAISILDTIRNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQI 180

Query: 181  GYNHTASVYNALLDVCECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVA 240
            GYNHTASVYNALLDV ECGSYDRVPE+FLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVA
Sbjct: 181  GYNHTASVYNALLDVYECGSYDRVPEQFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVA 240

Query: 241  LEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQA 300
            LEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLG FAQA
Sbjct: 241  LEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGRFAQA 300

Query: 301  LCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNART 360
            LCKVGKWREALSLIEKEDFVPNTILYTKMISGLC+ASFFEEAMDFLNRMRSSSCIPNA+T
Sbjct: 301  LCKVGKWREALSLIEKEDFVPNTILYTKMISGLCNASFFEEAMDFLNRMRSSSCIPNAQT 360

Query: 361  YKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKTGDFSYAYKLLKKME 420
            YKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCK+GDFSYAYKLLKKME
Sbjct: 361  YKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKSGDFSYAYKLLKKME 420

Query: 421  KCECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLC 480
            KCECKPGYVVYNI IGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLC
Sbjct: 421  KCECKPGYVVYNIFIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLC 480

Query: 481  GFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVY 540
            GFGKFE+AYKVIHEMMGNGFIPD STYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVY
Sbjct: 481  GFGKFEEAYKVIHEMMGNGFIPDRSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVY 540

Query: 541  TYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVM 600
            TYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVM
Sbjct: 541  TYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVM 600

Query: 601  IAKGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIPDVDMYFKTENNVSEKPNV 660
            IAKGCIPNVITYTALIDGY KSGNIE ACQIYARMRGDADIPDVDMYFKTENNVSEKPNV
Sbjct: 601  IAKGCIPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKTENNVSEKPNV 660

Query: 661  VTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVFVK 720
            VTYGALVDGLCKAHKVKDACDLLETMF EGCEPNNIVYDALIDGFCKAAKLDEAQEVFVK
Sbjct: 661  VTYGALVDGLCKAHKVKDACDLLETMFLEGCEPNNIVYDALIDGFCKAAKLDEAQEVFVK 720

Query: 721  MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAK 780
            MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAK
Sbjct: 721  MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAK 780

Query: 781  TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTV 840
            TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTV
Sbjct: 781  TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTV 840

Query: 841  LINHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGILEEVEKNDAT 900
            LINHCCASG LDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLG+LEEVEKNDAT
Sbjct: 841  LINHCCASGRLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGLLEEVEKNDAT 900

Query: 901  PIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQAF 960
            PIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFS AMKIDQAF
Sbjct: 901  PIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSTAMKIDQAF 960

Query: 961  ELYNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEALQLSDSICQMDINWLQREDA 1015
            ELYNDMIRQGVIPDLGTFV LIMGLVKV RWEEALQLSDSICQMDINWLQREDA
Sbjct: 961  ELYNDMIRQGVIPDLGTFVDLIMGLVKVRRWEEALQLSDSICQMDINWLQREDA 1014

[Close]

BLAST of CmaCh17G005880 vs. ExPASy TrEMBL
Match: A0A6J1DAP3 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111018584 PE=4 SV=1)

HSP 1 Score: 1808.1 bits (4682), Expect = 0.0e+00
Identity = 886/1016 (87.20%), Postives = 947/1016 (93.21%), Query Frame = 0


Query: 1    MSRRGFKSLHFLSLSLISSPSRSNPIFSFHPFPVYSDSFRAALANITLYRPTLSSSIAHF 60
            MSRRG KSL  LS S  SSP R N +FS +P  ++SDS R +  NI++YR +LSS+IA +
Sbjct: 1    MSRRGLKSLRLLSTSFNSSPFRLNAVFSTNPSLIFSDSSRFSFGNISVYRLSLSSAIAKY 60

Query: 61   STS-PDDLQGLVDPDESFPSESSRVECFSAPEVSLLRDSLLDSHADSPSSEPTLKSGKIS 120
            +TS PD+L+GLVD D+S PSESSRVECFSA EV  LRDSLLDS ADS SSE TL+ GKIS
Sbjct: 61   TTSPPDNLEGLVDLDDSNPSESSRVECFSAQEVGFLRDSLLDSPADSGSSEKTLEIGKIS 120

Query: 121  NDAISILDTICNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQ 180
            N+AISILD I N DDGFGDKTQKLLRQFRQ+LNPDLVVE+L LLR+PELCV+FFLWAGRQ
Sbjct: 121  NEAISILDAIRNGDDGFGDKTQKLLRQFRQSLNPDLVVEVLNLLRSPELCVRFFLWAGRQ 180

Query: 181  IGYNHTASVYNALLDVCECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNV 240
            IGYNHTASVY ALLDV EC +YDRVPE++LREI  DDK VLGKLLNVLIRKCCRNG WNV
Sbjct: 181  IGYNHTASVYCALLDVFECDNYDRVPEEYLREIWGDDKVVLGKLLNVLIRKCCRNGLWNV 240

Query: 241  ALEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQ 300
            ALEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTA+LVHREMS+ GF+MDEFTLG FAQ
Sbjct: 241  ALEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAHLVHREMSQSGFSMDEFTLGFFAQ 300

Query: 301  ALCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNAR 360
            ALC+VGKWR+ALSLIEKEDFVPNT+LYTKMISGLC+AS FEEAMDFLNRMRS+SCIPNA+
Sbjct: 301  ALCRVGKWRDALSLIEKEDFVPNTVLYTKMISGLCEASLFEEAMDFLNRMRSTSCIPNAQ 360

Query: 361  TYKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKTGDFSYAYKLLKKM 420
            TYKILLCGCLNKKQLGRCKRILSMMIAEGCFPSY IFNSLVHAYC++GDFSYAYKLLKKM
Sbjct: 361  TYKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYRIFNSLVHAYCRSGDFSYAYKLLKKM 420

Query: 421  EKCECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCL 480
            E C CKPGYVVYNILIGGIC  +ELPGP+TFELAEKAYNEM S+GTVLNKVNVV+FARCL
Sbjct: 421  ENCGCKPGYVVYNILIGGICGSEELPGPVTFELAEKAYNEMLSAGTVLNKVNVVNFARCL 480

Query: 481  CGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDV 540
            CGFGKFEKAYKVIHEMM NGFIPDTSTYSEVIGF+CNASRVENAFLLFKEMKG G+VPDV
Sbjct: 481  CGFGKFEKAYKVIHEMMDNGFIPDTSTYSEVIGFLCNASRVENAFLLFKEMKGTGVVPDV 540

Query: 541  YTYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEV 600
            YTYTILIDCFSKAGLI+QAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVS+ANELFE+
Sbjct: 541  YTYTILIDCFSKAGLIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSIANELFEL 600

Query: 601  MIAKGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIPDVDMYFKTENNVSEKPN 660
            M+AKGCIPNVITYTALIDGY KSGNIE ACQIY+RMRGD DIPDVDMYFKTENNVSEKPN
Sbjct: 601  MLAKGCIPNVITYTALIDGYCKSGNIEKACQIYSRMRGDEDIPDVDMYFKTENNVSEKPN 660

Query: 661  VVTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVFV 720
            VVT+GALVDGLCKAHKVKDA +LLETMF EGCEPNNIVYDALIDGFCKAAKLDEAQEVF 
Sbjct: 661  VVTFGALVDGLCKAHKVKDARNLLETMFLEGCEPNNIVYDALIDGFCKAAKLDEAQEVFA 720

Query: 721  KMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVA 780
            KMVERGYNPNVYTYSSLIDRLFKDKRLD VLKVLSKMLENSCAPNVVIYTEMIDGL KVA
Sbjct: 721  KMVERGYNPNVYTYSSLIDRLFKDKRLDFVLKVLSKMLENSCAPNVVIYTEMIDGLSKVA 780

Query: 781  KTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYT 840
            KTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGC+PNFVTYT
Sbjct: 781  KTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYT 840

Query: 841  VLINHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGILEEVEKNDA 900
            VLINHCCA+G LDEAYALLDEMKQTYWPKH+SSYCKV+EGYNREFILSLG+LEE EKND+
Sbjct: 841  VLINHCCATGFLDEAYALLDEMKQTYWPKHISSYCKVIEGYNREFILSLGLLEEAEKNDS 900

Query: 901  TPIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQA 960
             PIILLYRVLIDNF+KAGRLEVAL+LHKEVISASMSMAAKKNMYT+LI+SFS A KI  A
Sbjct: 901  APIILLYRVLIDNFIKAGRLEVALKLHKEVISASMSMAAKKNMYTSLIHSFSNATKIGHA 960

Query: 961  FELYNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEALQLSDSICQMDINWLQREDAP 1016
            FEL+NDMIRQG IPDLGTFVHLI GL+KVSRWEEALQL+D ICQMDINWLQ+ED P
Sbjct: 961  FELFNDMIRQGAIPDLGTFVHLITGLIKVSRWEEALQLADIICQMDINWLQQEDTP 1016

[Close]

BLAST of CmaCh17G005880 vs. ExPASy TrEMBL
Match: A0A1S3BE59 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103488647 PE=4 SV=1)

HSP 1 Score: 1771.5 bits (4587), Expect = 0.0e+00
Identity = 873/1016 (85.93%), Postives = 929/1016 (91.44%), Query Frame = 0


Query: 1    MSRRGFKSLHFLSLSLISSPSRSNPIFSFHPFPVYSDSFRAALANITLYRPTLSSSIAHF 60
            MSRRG KSLHFLS S ISSP R N +FS +PF +YS                 SS+ AHF
Sbjct: 1    MSRRGLKSLHFLSFSFISSPIRFNALFSSNPFTIYSH----------------SSAFAHF 60

Query: 61   -STSPDDLQGLVDPDESFPSESSRVECFSAPEVSLLRDSLLDSHADSPSSEPTLKSGKIS 120
             S+SPDDLQGLVD D+S  S++SRV+CFS  EVSLLRDSLL+SHADS  S+ TL++ K+S
Sbjct: 61   SSSSPDDLQGLVDFDQSLSSDTSRVQCFSPQEVSLLRDSLLNSHADSCFSDRTLQAVKMS 120

Query: 121  NDAISILDTICNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQ 180
            N+A  ILD I N DDGFG+KT  +LRQFRQ LNPDLVVEIL  LR+PELCVKFFLWAGRQ
Sbjct: 121  NEAFLILDAIRNCDDGFGEKTHIVLRQFRQKLNPDLVVEILSFLRSPELCVKFFLWAGRQ 180

Query: 181  IGYNHTASVYNALLDVCECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNV 240
            IGY+HT +VY ALLDV EC SYDRVPE+FLREIK DD+EVLGKLLNVLIRKCCRNG WNV
Sbjct: 181  IGYSHTPAVYIALLDVFECRSYDRVPEEFLREIKGDDQEVLGKLLNVLIRKCCRNGLWNV 240

Query: 241  ALEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQ 300
            ALEELGRLKDFGYKPTR+TYNAL+QVFLRADKLDTA LVHREMSELG +MDEFTLG FAQ
Sbjct: 241  ALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQ 300

Query: 301  ALCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNAR 360
            ALCKVGKWREALSLIEKEDFVPNTILY KMISGLC+ASFFEEAMDFLNRMRSSSCIPN +
Sbjct: 301  ALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSSSCIPNVQ 360

Query: 361  TYKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKTGDFSYAYKLLKKM 420
            TYKILLCGCLNKKQLGRCKRILSMMIAEGC+PSYTIFNSLVHAYCK+ DF YAYKLLKKM
Sbjct: 361  TYKILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKM 420

Query: 421  EKCECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCL 480
            E CECKPGYVVYNILIG IC+G ELPGP+TFELAEKAYNEM S+GTVLNKVNVVSFARCL
Sbjct: 421  ETCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCL 480

Query: 481  CGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDV 540
            CGFGKFEKAYKVIHEMMGNGF+PDTSTYSEVIGF+CNASRVENAF LFKEMKG G++PDV
Sbjct: 481  CGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVIPDV 540

Query: 541  YTYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEV 600
            YTYTILIDCFSKAGLI+QAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE+
Sbjct: 541  YTYTILIDCFSKAGLIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEL 600

Query: 601  MIAKGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIPDVDMYFKTENNVSEKPN 660
            MIAKGC PNVITYTALIDGY KSGNIE ACQIYARMRGDADIPDVDMYFK +NNV+EKPN
Sbjct: 601  MIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPN 660

Query: 661  VVTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVFV 720
            VVTYGALVDGLCKAHKVKDA DLLETMF +GCEPN I+YDALIDGFCKAAKLDEAQEVF 
Sbjct: 661  VVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIIYDALIDGFCKAAKLDEAQEVFH 720

Query: 721  KMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVA 780
            KMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGL KVA
Sbjct: 721  KMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVA 780

Query: 781  KTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYT 840
            KTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGC+PNFVTYT
Sbjct: 781  KTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYT 840

Query: 841  VLINHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGILEEVEKNDA 900
            VLINHCCA+G LDEAYALL+EMKQTYWPKHVSSYCKV+EGY REFILSLG+LEEVEKN +
Sbjct: 841  VLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGS 900

Query: 901  TPIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQA 960
             PIILLY+VLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYT+LIYSFS A KI  A
Sbjct: 901  APIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHA 960

Query: 961  FELYNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEALQLSDSICQMDINWLQREDAP 1016
            FEL+ DMIR GVIPDLGTFVHL+MGL++V  WEEALQLSDSICQMDINWL++ED P
Sbjct: 961  FELFYDMIRDGVIPDLGTFVHLLMGLIRVRMWEEALQLSDSICQMDINWLRQEDKP 1000

[Close]

BLAST of CmaCh17G005880 vs. ExPASy TrEMBL
Match: A0A5A7V4K9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold381G00700 PE=4 SV=1)

HSP 1 Score: 1751.9 bits (4536), Expect = 0.0e+00
Identity = 865/1005 (86.07%), Postives = 919/1005 (91.44%), Query Frame = 0


Query: 1    MSRRGFKSLHFLSLSLISSPSRSNPIFSFHPFPVYSDSFRAALANITLYRPTLSSSIAHF 60
            MSRRG KSLHFLS S ISSP R N +FS +PF +YS                 SS+ AHF
Sbjct: 1    MSRRGLKSLHFLSFSFISSPIRFNALFSSNPFTIYSH----------------SSAFAHF 60

Query: 61   -STSPDDLQGLVDPDESFPSESSRVECFSAPEVSLLRDSLLDSHADSPSSEPTLKSGKIS 120
             S+SPDDLQGLVD D+S  S++SRV+CFS  EVSLLRDSLL+SHADS  S+ TL++ K+S
Sbjct: 61   SSSSPDDLQGLVDFDQSLSSDTSRVQCFSPQEVSLLRDSLLNSHADSCFSDRTLQAVKMS 120

Query: 121  NDAISILDTICNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQ 180
            N+A  ILD I N DDGFG+KT  +LRQFRQ LNPDLVVEIL  LR+PELCVKFFLWAGRQ
Sbjct: 121  NEAFLILDAIRNCDDGFGEKTHIVLRQFRQKLNPDLVVEILSFLRSPELCVKFFLWAGRQ 180

Query: 181  IGYNHTASVYNALLDVCECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNV 240
            IGY+HT +VY ALLDV EC SYDRVPE+FLREIK DD+EVLGKLLNVLIRKCCRNG WNV
Sbjct: 181  IGYSHTPAVYIALLDVFECRSYDRVPEEFLREIKGDDQEVLGKLLNVLIRKCCRNGLWNV 240

Query: 241  ALEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQ 300
            ALEELGRLKDFGYKPTR+TYNAL+QVFLRADKLDTA LVHREMSELG +MDEFTLG FAQ
Sbjct: 241  ALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQ 300

Query: 301  ALCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNAR 360
            ALCKVGKWREALSLIEKEDFVPNTILY KMISGLC+ASFFEEAMDFLNRMRSSSCIPN +
Sbjct: 301  ALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSSSCIPNVQ 360

Query: 361  TYKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKTGDFSYAYKLLKKM 420
            TYKILLCGCLNKKQLGRCKRILSMMIAEGC+PSYTIFNSLVHAYCK+ DF YAYKLLKKM
Sbjct: 361  TYKILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKM 420

Query: 421  EKCECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCL 480
            E CECKPGYVVYNILIG IC+G ELPGP+TFELAEKAYNEM S+GTVLNKVNVVSFARCL
Sbjct: 421  ETCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCL 480

Query: 481  CGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDV 540
            CGFGKFEKAYKVIHEMMGNGF+PDTSTYSEVIGF+CNASRVENAF LFKEMKG G++PDV
Sbjct: 481  CGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVIPDV 540

Query: 541  YTYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEV 600
            YTYTILIDCFSKAGLI+QAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE+
Sbjct: 541  YTYTILIDCFSKAGLIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEL 600

Query: 601  MIAKGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIPDVDMYFKTENNVSEKPN 660
            MIAKGC PNVITYTALIDGY KSGNIE ACQIYARMRGDADIPDVDMYFK +NNV+EKPN
Sbjct: 601  MIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPN 660

Query: 661  VVTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVFV 720
            VVTYGALVDGLCKAHKVKDA DLLETMF +GCEPN I+YDALIDGFCKAAKLDEAQEVF 
Sbjct: 661  VVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIIYDALIDGFCKAAKLDEAQEVFH 720

Query: 721  KMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVA 780
            KMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGL KVA
Sbjct: 721  KMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVA 780

Query: 781  KTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYT 840
            KTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGC+PNFVTYT
Sbjct: 781  KTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYT 840

Query: 841  VLINHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGILEEVEKNDA 900
            VLINHCCA+G LDEAYALL+EMKQTYWPKHVSSYCKV+EGY REFILSLG+LEEVEKN +
Sbjct: 841  VLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGS 900

Query: 901  TPIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQA 960
             PIILLY+VLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYT+LIYSFS A KI  A
Sbjct: 901  APIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHA 960

Query: 961  FELYNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEALQLSDSICQM 1005
            FEL+ DMIR GVIPDLGTFVHL+MGL++V  WEEALQLSDSICQM
Sbjct: 961  FELFYDMIRDGVIPDLGTFVHLLMGLIRVRMWEEALQLSDSICQM 989

[Close]

BLAST of CmaCh17G005880 vs. NCBI nr
Match: XP_022992076.1 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucurbita maxima])

HSP 1 Score: 2063.5 bits (5345), Expect = 0.0e+00
Identity = 1015/1015 (100.00%), Postives = 1015/1015 (100.00%), Query Frame = 0


Query: 1    MSRRGFKSLHFLSLSLISSPSRSNPIFSFHPFPVYSDSFRAALANITLYRPTLSSSIAHF 60
            MSRRGFKSLHFLSLSLISSPSRSNPIFSFHPFPVYSDSFRAALANITLYRPTLSSSIAHF
Sbjct: 1    MSRRGFKSLHFLSLSLISSPSRSNPIFSFHPFPVYSDSFRAALANITLYRPTLSSSIAHF 60

Query: 61   STSPDDLQGLVDPDESFPSESSRVECFSAPEVSLLRDSLLDSHADSPSSEPTLKSGKISN 120
            STSPDDLQGLVDPDESFPSESSRVECFSAPEVSLLRDSLLDSHADSPSSEPTLKSGKISN
Sbjct: 61   STSPDDLQGLVDPDESFPSESSRVECFSAPEVSLLRDSLLDSHADSPSSEPTLKSGKISN 120

Query: 121  DAISILDTICNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQI 180
            DAISILDTICNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQI
Sbjct: 121  DAISILDTICNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQI 180

Query: 181  GYNHTASVYNALLDVCECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVA 240
            GYNHTASVYNALLDVCECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVA
Sbjct: 181  GYNHTASVYNALLDVCECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVA 240

Query: 241  LEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQA 300
            LEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQA
Sbjct: 241  LEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQA 300

Query: 301  LCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNART 360
            LCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNART
Sbjct: 301  LCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNART 360

Query: 361  YKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKTGDFSYAYKLLKKME 420
            YKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKTGDFSYAYKLLKKME
Sbjct: 361  YKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKTGDFSYAYKLLKKME 420

Query: 421  KCECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLC 480
            KCECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLC
Sbjct: 421  KCECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLC 480

Query: 481  GFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVY 540
            GFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVY
Sbjct: 481  GFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVY 540

Query: 541  TYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVM 600
            TYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVM
Sbjct: 541  TYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVM 600

Query: 601  IAKGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIPDVDMYFKTENNVSEKPNV 660
            IAKGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIPDVDMYFKTENNVSEKPNV
Sbjct: 601  IAKGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIPDVDMYFKTENNVSEKPNV 660

Query: 661  VTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVFVK 720
            VTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVFVK
Sbjct: 661  VTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVFVK 720

Query: 721  MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAK 780
            MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAK
Sbjct: 721  MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAK 780

Query: 781  TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTV 840
            TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTV
Sbjct: 781  TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTV 840

Query: 841  LINHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGILEEVEKNDAT 900
            LINHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGILEEVEKNDAT
Sbjct: 841  LINHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGILEEVEKNDAT 900

Query: 901  PIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQAF 960
            PIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQAF
Sbjct: 901  PIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQAF 960

Query: 961  ELYNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEALQLSDSICQMDINWLQREDAP 1016
            ELYNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEALQLSDSICQMDINWLQREDAP
Sbjct: 961  ELYNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEALQLSDSICQMDINWLQREDAP 1015

[Close]

BLAST of CmaCh17G005880 vs. NCBI nr
Match: XP_023549324.1 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023549325.1 pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 2010.7 bits (5208), Expect = 0.0e+00
Identity = 990/1014 (97.63%), Postives = 1000/1014 (98.62%), Query Frame = 0


Query: 1    MSRRGFKSLHFLSLSLISSPSRSNPIFSFHPFPVYSDSFRAALANITLYRPTLSSSIAHF 60
            MSRRG KSLHFLSLSLISSP RSNPIFSFHPFPVYSDSFRAALANITLYRPT SSSIAHF
Sbjct: 1    MSRRGLKSLHFLSLSLISSPIRSNPIFSFHPFPVYSDSFRAALANITLYRPTPSSSIAHF 60

Query: 61   STSPDDLQGLVDPDESFPSESSRVECFSAPEVSLLRDSLLDSHADSPSSEPTLKSGKISN 120
            STSPDDLQGLVDPDES PSE SR ECFSAPE+SLLRDSLLDSHADSPSSEPTLKSG ISN
Sbjct: 61   STSPDDLQGLVDPDESLPSEGSRAECFSAPELSLLRDSLLDSHADSPSSEPTLKSGNISN 120

Query: 121  DAISILDTICNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQI 180
            DAISILDTI N+DDGFGDKTQ+LLR+FRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQI
Sbjct: 121  DAISILDTIRNTDDGFGDKTQRLLRRFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQI 180

Query: 181  GYNHTASVYNALLDVCECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVA 240
            GYNHTASVYNALLDV ECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVA
Sbjct: 181  GYNHTASVYNALLDVYECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVA 240

Query: 241  LEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQA 300
            LEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQA
Sbjct: 241  LEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQA 300

Query: 301  LCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNART 360
            LCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNA+T
Sbjct: 301  LCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNAQT 360

Query: 361  YKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKTGDFSYAYKLLKKME 420
            YKILLCGCLNKKQLGRCKRILSMMIAEGCFP+YTIFNSLVHAYCK+GDFSYAYKLLKKME
Sbjct: 361  YKILLCGCLNKKQLGRCKRILSMMIAEGCFPTYTIFNSLVHAYCKSGDFSYAYKLLKKME 420

Query: 421  KCECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLC 480
            KCECKPGYVVYNI IGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVN+VSFARCLC
Sbjct: 421  KCECKPGYVVYNIFIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNIVSFARCLC 480

Query: 481  GFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVY 540
            GFGKFE+AYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVY
Sbjct: 481  GFGKFEEAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVY 540

Query: 541  TYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVM 600
            TYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVM
Sbjct: 541  TYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVM 600

Query: 601  IAKGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIPDVDMYFKTENNVSEKPNV 660
            IAKGCIPNVITYTALIDGYSKSGNIE ACQIYARMRGDADIPDVDMYFKTENNVSEKPNV
Sbjct: 601  IAKGCIPNVITYTALIDGYSKSGNIEKACQIYARMRGDADIPDVDMYFKTENNVSEKPNV 660

Query: 661  VTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVFVK 720
            VTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVFVK
Sbjct: 661  VTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVFVK 720

Query: 721  MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAK 780
            MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAK
Sbjct: 721  MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAK 780

Query: 781  TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTV 840
            TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREM SKGCSPNFVTYTV
Sbjct: 781  TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMSSKGCSPNFVTYTV 840

Query: 841  LINHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGILEEVEKNDAT 900
            LINHCCASG LDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLG+LEEVEKNDAT
Sbjct: 841  LINHCCASGRLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGLLEEVEKNDAT 900

Query: 901  PIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQAF 960
            PIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQAF
Sbjct: 901  PIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQAF 960

Query: 961  ELYNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEALQLSDSICQMDINWLQREDA 1015
            ELYNDMIRQGVIPDLGTFV LIMGLVKVSRWEEALQLSDSICQMDINWLQREDA
Sbjct: 961  ELYNDMIRQGVIPDLGTFVDLIMGLVKVSRWEEALQLSDSICQMDINWLQREDA 1014

[Close]

BLAST of CmaCh17G005880 vs. NCBI nr
Match: XP_022929904.1 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucurbita moschata] >XP_022929905.1 pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucurbita moschata])

HSP 1 Score: 2000.3 bits (5181), Expect = 0.0e+00
Identity = 988/1014 (97.44%), Postives = 994/1014 (98.03%), Query Frame = 0


Query: 1    MSRRGFKSLHFLSLSLISSPSRSNPIFSFHPFPVYSDSFRAALANITLYRPTLSSSIAHF 60
            MSRRG KSLHFLSLSLISSP RSNPIFSFHPFPVYSDSFRAAL NITLYRPT SSSIAHF
Sbjct: 1    MSRRGLKSLHFLSLSLISSPIRSNPIFSFHPFPVYSDSFRAALPNITLYRPTPSSSIAHF 60

Query: 61   STSPDDLQGLVDPDESFPSESSRVECFSAPEVSLLRDSLLDSHADSPSSEPTLKSGKISN 120
            STSPDDLQGLVDPDES PSE SR ECFSAPEVSLLR SLLDSHADSPSSEPTLKSGKISN
Sbjct: 61   STSPDDLQGLVDPDESLPSEGSRAECFSAPEVSLLRGSLLDSHADSPSSEPTLKSGKISN 120

Query: 121  DAISILDTICNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQI 180
            DAISILDTI NSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQI
Sbjct: 121  DAISILDTIRNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQI 180

Query: 181  GYNHTASVYNALLDVCECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVA 240
            GYNHTASVYNALLDV ECGSYDRVPE+FLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVA
Sbjct: 181  GYNHTASVYNALLDVYECGSYDRVPEQFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVA 240

Query: 241  LEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQA 300
            LEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLG FAQA
Sbjct: 241  LEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGRFAQA 300

Query: 301  LCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNART 360
            LCKVGKWREALSLIEKEDFVPNTILYTKMISGLC+ASFFEEAMDFLNRMRSSSCIPNA+T
Sbjct: 301  LCKVGKWREALSLIEKEDFVPNTILYTKMISGLCNASFFEEAMDFLNRMRSSSCIPNAQT 360

Query: 361  YKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKTGDFSYAYKLLKKME 420
            YKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCK+GDFSYAYKLLKKME
Sbjct: 361  YKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKSGDFSYAYKLLKKME 420

Query: 421  KCECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLC 480
            KCECKPGYVVYNI IGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLC
Sbjct: 421  KCECKPGYVVYNIFIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLC 480

Query: 481  GFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVY 540
            GFGKFE+AYKVIHEMMGNGFIPD STYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVY
Sbjct: 481  GFGKFEEAYKVIHEMMGNGFIPDRSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVY 540

Query: 541  TYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVM 600
            TYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVM
Sbjct: 541  TYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVM 600

Query: 601  IAKGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIPDVDMYFKTENNVSEKPNV 660
            IAKGCIPNVITYTALIDGY KSGNIE ACQIYARMRGDADIPDVDMYFKTENNVSEKPNV
Sbjct: 601  IAKGCIPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKTENNVSEKPNV 660

Query: 661  VTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVFVK 720
            VTYGALVDGLCKAHKVKDACDLLETMF EGCEPNNIVYDALIDGFCKAAKLDEAQEVFVK
Sbjct: 661  VTYGALVDGLCKAHKVKDACDLLETMFLEGCEPNNIVYDALIDGFCKAAKLDEAQEVFVK 720

Query: 721  MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAK 780
            MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAK
Sbjct: 721  MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAK 780

Query: 781  TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTV 840
            TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTV
Sbjct: 781  TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTV 840

Query: 841  LINHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGILEEVEKNDAT 900
            LINHCCASG LDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLG+LEEVEKNDAT
Sbjct: 841  LINHCCASGRLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGLLEEVEKNDAT 900

Query: 901  PIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQAF 960
            PIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFS AMKIDQAF
Sbjct: 901  PIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSTAMKIDQAF 960

Query: 961  ELYNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEALQLSDSICQMDINWLQREDA 1015
            ELYNDMIRQGVIPDLGTFV LIMGLVKV RWEEALQLSDSICQMDINWLQREDA
Sbjct: 961  ELYNDMIRQGVIPDLGTFVDLIMGLVKVRRWEEALQLSDSICQMDINWLQREDA 1014

[Close]

BLAST of CmaCh17G005880 vs. NCBI nr
Match: KAG6575348.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1989.5 bits (5153), Expect = 0.0e+00
Identity = 981/1007 (97.42%), Postives = 990/1007 (98.31%), Query Frame = 0


Query: 1    MSRRGFKSLHFLSLSLISSPSRSNPIFSFHPFPVYSDSFRAALANITLYRPTLSSSIAHF 60
            MSRRG KSLHFL+LSLISSP RSNPIFSFHPFPVYSDS RAAL NITLYRPT SSSIAHF
Sbjct: 1    MSRRGLKSLHFLTLSLISSPIRSNPIFSFHPFPVYSDSLRAALPNITLYRPTPSSSIAHF 60

Query: 61   STSPDDLQGLVDPDESFPSESSRVECFSAPEVSLLRDSLLDSHADSPSSEPTLKSGKISN 120
            STSPDDLQGLVDPDES PSE SR ECFSAPEVSLLR SLLDSHADSPSSEPTLKSGKISN
Sbjct: 61   STSPDDLQGLVDPDESLPSEGSRAECFSAPEVSLLRGSLLDSHADSPSSEPTLKSGKISN 120

Query: 121  DAISILDTICNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQI 180
            DAISILDTI NSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQI
Sbjct: 121  DAISILDTIRNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQI 180

Query: 181  GYNHTASVYNALLDVCECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVA 240
            GYNHTA+VYNALLDV ECGSYDRVPE+FLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVA
Sbjct: 181  GYNHTAAVYNALLDVYECGSYDRVPEQFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVA 240

Query: 241  LEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQA 300
            LEELGRLKDFGYKPTRLTYNAL+QVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQA
Sbjct: 241  LEELGRLKDFGYKPTRLTYNALVQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQA 300

Query: 301  LCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNART 360
            LCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNART
Sbjct: 301  LCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNART 360

Query: 361  YKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKTGDFSYAYKLLKKME 420
            YKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCK+GDFSYAYKLLKKME
Sbjct: 361  YKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKSGDFSYAYKLLKKME 420

Query: 421  KCECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLC 480
            KCECKPGYVVYNI IGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLC
Sbjct: 421  KCECKPGYVVYNIFIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLC 480

Query: 481  GFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVY 540
            GFGKFE+AYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVY
Sbjct: 481  GFGKFEEAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVY 540

Query: 541  TYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVM 600
            TYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVM
Sbjct: 541  TYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVM 600

Query: 601  IAKGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIPDVDMYFKTENNVSEKPNV 660
            IAKGCIPNVITYTALIDGY KSGNIE ACQIYARMRGDADIPDVDMYFKTENNVSEKPNV
Sbjct: 601  IAKGCIPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKTENNVSEKPNV 660

Query: 661  VTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVFVK 720
            VTYGALVDGLCKAHKVKDACDLLETMF+EGCEPNNIVYDALIDGFCKAAKLDEAQEVFVK
Sbjct: 661  VTYGALVDGLCKAHKVKDACDLLETMFTEGCEPNNIVYDALIDGFCKAAKLDEAQEVFVK 720

Query: 721  MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAK 780
            MVERGY+PNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAK
Sbjct: 721  MVERGYSPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAK 780

Query: 781  TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTV 840
            TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTV
Sbjct: 781  TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTV 840

Query: 841  LINHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGILEEVEKNDAT 900
            LINHCCASG LDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLG+LEEVEKNDAT
Sbjct: 841  LINHCCASGRLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGLLEEVEKNDAT 900

Query: 901  PIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQAF 960
            PIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQAF
Sbjct: 901  PIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQAF 960

Query: 961  ELYNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEALQLSDSICQMDIN 1008
            ELYNDMIRQGVIPDLGTFV LIMGLVKV RWEEALQLSDSICQMDIN
Sbjct: 961  ELYNDMIRQGVIPDLGTFVDLIMGLVKVRRWEEALQLSDSICQMDIN 1007

[Close]

BLAST of CmaCh17G005880 vs. NCBI nr
Match: KAG7013883.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1977.6 bits (5122), Expect = 0.0e+00
Identity = 975/1004 (97.11%), Postives = 986/1004 (98.21%), Query Frame = 0


Query: 1    MSRRGFKSLHFLSLSLISSPSRSNPIFSFHPFPVYSDSFRAALANITLYRPTLSSSIAHF 60
            MSRRG KSLHFL+LSLISSP RSNPIFSFHPFPVYSDS RAAL NITLYRPT SSSIAHF
Sbjct: 1    MSRRGLKSLHFLTLSLISSPIRSNPIFSFHPFPVYSDSLRAALPNITLYRPTPSSSIAHF 60

Query: 61   STSPDDLQGLVDPDESFPSESSRVECFSAPEVSLLRDSLLDSHADSPSSEPTLKSGKISN 120
            STSPDDLQGLVDPDES PSE SR ECFSAPEVSLLR SLLDSHADSPSSEPTLKSGKISN
Sbjct: 61   STSPDDLQGLVDPDESLPSEGSRAECFSAPEVSLLRGSLLDSHADSPSSEPTLKSGKISN 120

Query: 121  DAISILDTICNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQI 180
            DAISILDTI NSDDGFGDKTQ+LLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQI
Sbjct: 121  DAISILDTIRNSDDGFGDKTQRLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQI 180

Query: 181  GYNHTASVYNALLDVCECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVA 240
            GYNHTA+VYNALLDV ECGSYDRVPE+FLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVA
Sbjct: 181  GYNHTAAVYNALLDVYECGSYDRVPEQFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVA 240

Query: 241  LEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQA 300
            LEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQA
Sbjct: 241  LEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQA 300

Query: 301  LCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNART 360
            LCKVGKWREALSLIEKEDFVPNTILYTKMI GLC+ASFFEEAMDFLNRMRSSSCIPNART
Sbjct: 301  LCKVGKWREALSLIEKEDFVPNTILYTKMIYGLCNASFFEEAMDFLNRMRSSSCIPNART 360

Query: 361  YKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKTGDFSYAYKLLKKME 420
            YKILLCGCLNK+QLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCK+GDFSYAYKLLKKME
Sbjct: 361  YKILLCGCLNKEQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKSGDFSYAYKLLKKME 420

Query: 421  KCECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLC 480
            KCECKPGYVVYNI IGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLC
Sbjct: 421  KCECKPGYVVYNIFIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLC 480

Query: 481  GFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVY 540
            GFGKFE+AYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVY
Sbjct: 481  GFGKFEEAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVY 540

Query: 541  TYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVM 600
            TYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVM
Sbjct: 541  TYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVM 600

Query: 601  IAKGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIPDVDMYFKTENNVSEKPNV 660
            IAKGCIPNVITYTALIDGY KSGNIE ACQIYARMRGDADIPDVDMYFKTENNVSEKPNV
Sbjct: 601  IAKGCIPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKTENNVSEKPNV 660

Query: 661  VTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVFVK 720
            VTYGALVDGLCKAHKVKDACDLLETMF+EGCEPNNIVYDALIDGFCKAAKLDEAQEVFVK
Sbjct: 661  VTYGALVDGLCKAHKVKDACDLLETMFTEGCEPNNIVYDALIDGFCKAAKLDEAQEVFVK 720

Query: 721  MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAK 780
            MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAK
Sbjct: 721  MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAK 780

Query: 781  TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTV 840
            TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTV
Sbjct: 781  TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTV 840

Query: 841  LINHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGILEEVEKNDAT 900
            LINHCCASG LDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLG+LEEVEKNDAT
Sbjct: 841  LINHCCASGRLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGLLEEVEKNDAT 900

Query: 901  PIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQAF 960
            PIILLYRVLIDNFVKAGRLE+ALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQAF
Sbjct: 901  PIILLYRVLIDNFVKAGRLELALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQAF 960

Query: 961  ELYNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEALQLSDSICQM 1005
            ELYNDMIRQGVIPDLGTFV LIMGLVKV RWEEALQLSDSICQM
Sbjct: 961  ELYNDMIRQGVIPDLGTFVDLIMGLVKVRRWEEALQLSDSICQM 1004

[Close]

BLAST of CmaCh17G005880 vs. TAIR 10
Match: AT1G06710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 1203.0 bits (3111), Expect = 0.0e+00
Identity = 583/950 (61.37%), Postives = 726/950 (76.42%), Query Frame = 0


Query: 64   PDDLQGLVDPDESFPSESSRVECFSAPEVSLLRDSLLD-SHADSPSSEPTLKSGKISNDA 123
            PDD+ G  DP   F    SR       E S L DSL+D  + +     P +    I  DA
Sbjct: 47   PDDMFGFDDP---FSPSDSREVVDLTKEYSFLHDSLVDYGNVNVHQVVPIITQSSI--DA 106

Query: 124  ISILDTICNSDDGFGDKTQKLLRQFRQNLNPDLVVEILGLLRNPELCVKFFLWAGRQIGY 183
             +I D +   DD FG K+QK LRQFR+ L+  LV+E+L L+  P   + FF+WAGRQIGY
Sbjct: 107  RAIADAVSGVDDVFGRKSQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGY 166

Query: 184  NHTASVYNALLDVCECGSYDRVPEKFLREIKDDDKEVLGKLLNVLIRKCCRNGFWNVALE 243
             HTA VYNAL+D+      ++VPE+FL++I+DDDKEV G+ LNVL+RK CRNG +++ALE
Sbjct: 167  KHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALE 226

Query: 244  ELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSELGFNMDEFTLGLFAQALC 303
            ELGRLKDF ++P+R TYN LIQ FL+AD+LD+A L+HREMS     MD FTL  FA +LC
Sbjct: 227  ELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLC 286

Query: 304  KVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNARTYK 363
            KVGKWREAL+L+E E+FVP+T+ YTK+ISGLC+AS FEEAMDFLNRMR++SC+PN  TY 
Sbjct: 287  KVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYS 346

Query: 364  ILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKTGDFSYAYKLLKKMEKC 423
             LLCGCLNKKQLGRCKR+L+MM+ EGC+PS  IFNSLVHAYC +GD SYAYKLLKKM KC
Sbjct: 347  TLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKC 406

Query: 424  ECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLCGF 483
               PGYVVYNILIG IC  K+       +LAEKAY+EM ++G VLNK+NV SF RCLC  
Sbjct: 407  GHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSA 466

Query: 484  GKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVYTY 543
            GK+EKA+ VI EM+G GFIPDTSTYS+V+ ++CNAS++E AFLLF+EMK  G+V DVYTY
Sbjct: 467  GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 526

Query: 544  TILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVMIA 603
            TI++D F KAGLI+QA  W +EM   GC P VVTYT LIHAYLKAKKVS ANELFE M++
Sbjct: 527  TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 586

Query: 604  KGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIPDVDMYFKTENNVSEKPNVVT 663
            +GC+PN++TY+ALIDG+ K+G +E ACQI+ RM G  D+PDVDMYFK  ++ SE+PNVVT
Sbjct: 587  EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT 646

Query: 664  YGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDEAQEVFVKMV 723
            YGAL+DG CK+H+V++A  LL+ M  EGCEPN IVYDALIDG CK  KLDEAQEV  +M 
Sbjct: 647  YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 706

Query: 724  ERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAKTD 783
            E G+   +YTYSSLIDR FK KR DL  KVLSKMLENSCAPNVVIYTEMIDGLCKV KTD
Sbjct: 707  EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 766

Query: 784  EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTVLI 843
            EAYKLM MMEEKGC+PNVVTYTAMIDGFG  GK++ CLEL   MGSKG +PN+VTY VLI
Sbjct: 767  EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 826

Query: 844  NHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLGILEEVEKNDATPI 903
            +HCC +G LD A+ LL+EMKQT+WP H + Y KV+EG+N+EFI SLG+L+E+ ++D  P 
Sbjct: 827  DHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPF 886

Query: 904  ILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQAFEL 963
            + +YR+LIDN +KA RLE+AL L +EV + S ++    + Y +LI S   A K++ AF+L
Sbjct: 887  LSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQL 946

Query: 964  YNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEALQLSDSICQMDINWLQRE 1013
            +++M ++GVIP++ +F  LI GL + S+  EAL L D I  M+I W++ +
Sbjct: 947  FSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQWIEEK 991

[Close]

BLAST of CmaCh17G005880 vs. TAIR 10
Match: AT4G31850.1 (proton gradient regulation 3 )

HSP 1 Score: 302.8 bits (774), Expect = 1.1e-81
Identity = 226/824 (27.43%), Postives = 372/824 (45.15%), Query Frame = 0


Query: 226  VLIRKCCRNGFWNVALEELGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSEL 285
            + IR   R G  N A E L R+ D G  P  +TY  LI     A KLD A  V  +M   
Sbjct: 263  ICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTG 322

Query: 286  GFNMDEFT----LGLFAQALCKVGKWREALSLIEKEDFVPNTILYTKMISGLCDASFFEE 345
                D  T    L  F+     +   ++  S +EK+  VP+ + +T ++  LC A  F E
Sbjct: 323  RHKPDRVTYITLLDRFSDNR-DLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGE 382

Query: 346  AMDFLNRMRSSSCIPNARTYKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVH 405
            A D L+ MR    +PN  TY  L+CG L   +L     +   M + G  P+   +   + 
Sbjct: 383  AFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFID 442

Query: 406  AYCKTGDFSYAYKLLKKMEKCECKPGYVVYNILIGGICN-GKELPGPITFELAEKAYNEM 465
             Y K+GD   A +  +KM+     P  V  N  +  +   G++         A++ +  +
Sbjct: 443  YYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRD-------REAKQIFYGL 502

Query: 466  CSSGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRV 525
               G V + V      +C    G+ ++A K++ EMM NG  PD    + +I  +  A RV
Sbjct: 503  KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 562

Query: 526  ENAFLLFKEMKGAGMVPDVYTYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTL 585
            + A+ +F  MK   + P V TY  L+    K G IQ+A    + MV+ GC P  +T+ TL
Sbjct: 563  DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 622

Query: 586  IHAYLKAKKVSVANELFEVMIAKGCIPNVITYTALIDGYSKSGNIENACQIYARMR---- 645
                 K  +V++A ++   M+  GC+P+V TY  +I G  K+G ++ A   + +M+    
Sbjct: 623  FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY 682

Query: 646  -------------------------------GDADIPDVDMYFK-----------TENNV 705
                                             AD P  +++++            +N V
Sbjct: 683  PDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQP-ANLFWEDLIGSILAEAGIDNAV 742

Query: 706  SEKPNVVTYGALVDG----------LCKAHKVKDACDLLETMFSE-GCEPNNIVYDALID 765
            S    +V  G   DG           CK + V  A  L E    + G +P    Y+ LI 
Sbjct: 743  SFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIG 802

Query: 766  GFCKAAKLDEAQEVFVKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAP 825
            G  +A  ++ AQ+VF+++   G  P+V TY+ L+D   K  ++D + ++  +M  + C  
Sbjct: 803  GLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEA 862

Query: 826  NVVIYTEMIDGLCKVAKTDEAYKLML-MMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLEL 885
            N + +  +I GL K    D+A  L   +M ++   P   TY  +IDG  K+G++ +  +L
Sbjct: 863  NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL 922

Query: 886  FREMGSKGCSPNFVTYTVLINHCCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNR 945
            F  M   GC PN   Y +LIN    +G  D A AL   M +      + +Y  +V+    
Sbjct: 923  FEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 982

Query: 946  EFILSLGI--LEEVEKNDATPIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKK 985
               +  G+   +E++++   P ++ Y ++I+   K+ RLE AL L  E +  S  +    
Sbjct: 983  VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE-MKTSRGITPDL 1042

[Close]

BLAST of CmaCh17G005880 vs. TAIR 10
Match: AT1G62670.1 (rna processing factor 2 )

HSP 1 Score: 285.4 bits (729), Expect = 1.8e-76
Identity = 167/640 (26.09%), Postives = 285/640 (44.53%), Query Frame = 0


Query: 230 KCCRNGFWNVALEE----LGRLKDFGYKPTRLTYNALIQVFLRADKLDTAYLVHREMSEL 289
           K  RNG   + L++     G +      P+ + ++ L+    + +K D    +  +M  L
Sbjct: 51  KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110

Query: 290 GFNMDEFTLGLFAQALCKVGKWREALSLIEKE---DFVPNTILYTKMISGLCDASFFEEA 349
           G   + +T  +     C+  +   AL+++ K     + PN +  + +++G C +    EA
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170

Query: 350 MDFLNRMRSSSCIPNARTYKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSLVHA 409
           +  +++M  +   PN  T+  L+ G     +      ++  M+A+GC P    +  +V+ 
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230

Query: 410 YCKTGDFSYAYKLLKKMEKCECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNEMCS 469
            CK GD   A+ LL KME+ + +PG ++YN +I G+C  K +                  
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM------------------ 290

Query: 470 SGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASRVEN 529
                                  + A  +  EM   G  P+  TYS +I  +CN  R  +
Sbjct: 291 -----------------------DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 350

Query: 530 AFLLFKEMKGAGMVPDVYTYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTTLIH 589
           A  L  +M    + PDV+T++ LID F K G + +A    DEMV+   +P++VTY++LI+
Sbjct: 351 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 410

Query: 590 AYLKAKKVSVANELFEVMIAKGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDADIP 649
            +    ++  A ++FE M++K C P+V+TY  LI G+                       
Sbjct: 411 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF----------------------- 470

Query: 650 DVDMYFKTENNVSEKPNVVTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALI 709
                                       CK  +V++  ++   M   G   N + Y+ LI
Sbjct: 471 ----------------------------CKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 530

Query: 710 DGFCKAAKLDEAQEVFVKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCA 769
            G  +A   D AQE+F +MV  G  PN+ TY++L+D L K+ +L+  + V   +  +   
Sbjct: 531 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 590

Query: 770 PNVVIYTEMIDGLCKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLEL 829
           P +  Y  MI+G+CK  K ++ + L   +  KG KP+VV Y  MI GF + G  ++   L
Sbjct: 591 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 598

Query: 830 FREMGSKGCSPNFVTYTVLINHCCASGCLDEAYALLDEMK 863
           F+EM   G  PN   Y  LI      G  + +  L+ EM+
Sbjct: 651 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598

[Close]

BLAST of CmaCh17G005880 vs. TAIR 10
Match: AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 285.0 bits (728), Expect = 2.3e-76
Identity = 206/721 (28.57%), Postives = 330/721 (45.77%), Query Frame = 0


Query: 313  LIEKEDFVPNTILYTKMISGLCDASFFEEAMDFLNRMRSSSCIPNARTYKILLCGCLNKK 372
            +I K   +P     + ++ GL     F  AM+  N M S    P+   Y  ++      K
Sbjct: 182  MITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELK 241

Query: 373  QLGRCKRILSMMIAEGCFPSYTIFNSLVHAYCKTGDFSYAYKLLKKMEKCECKPGYVVYN 432
             L R K +++ M A GC  +   +N L+   CK      A  + K +   + KP  V Y 
Sbjct: 242  DLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYC 301

Query: 433  ILIGGICNGKELPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLCGFGKFEKAYKVI 492
             L+ G+C  +E      FE+  +  +EM       ++  V S    L   GK E+A  ++
Sbjct: 302  TLVYGLCKVQE------FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLV 361

Query: 493  HEMMGNGFIPDTSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVYTYTILIDCFSKA 552
              ++  G  P+   Y+ +I  +C   +   A LLF  M   G+ P+  TY+ILID F + 
Sbjct: 362  KRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRR 421

Query: 553  GLIQQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVMIAKGCIPNVITY 612
            G +  A ++L EMV  G + +V  Y +LI+ + K   +S A      MI K   P V+TY
Sbjct: 422  GKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTY 481

Query: 613  TALIDGYSKSGNIENACQIYARMRGDADIPDVDMY----------------FKTENNVSE 672
            T+L+ GY   G I  A ++Y  M G    P +  +                 K  N ++E
Sbjct: 482  TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 541

Query: 673  ---KPNVVTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYDALIDGFCKAAKLDE 732
               KPN VTY  +++G C+   +  A + L+ M  +G  P+   Y  LI G C   +  E
Sbjct: 542  WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 601

Query: 733  AQEVFVKMVERG-YNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMI 792
            A +VFV  + +G    N   Y+ L+    ++ +L+  L V  +M++     ++V Y  +I
Sbjct: 602  A-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 661

Query: 793  DGLCKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCS 852
            DG  K       + L+  M ++G KP+ V YT+MID   K G   +   ++  M ++GC 
Sbjct: 662  DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 721

Query: 853  PNFVTYTVLINHCCASGCLDEAYALLDEMKQ-TYWPKHVSSYC------KVVEGYNREFI 912
            PN VTYT +IN  C +G ++EA  L  +M+  +  P  V+  C      K      +   
Sbjct: 722  PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE 781

Query: 913  LSLGILEEVEKNDATPIILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTT 972
            L   IL+ +  N AT     Y +LI  F + GR+E A EL   +I   +S       YTT
Sbjct: 782  LHNAILKGLLANTAT-----YNMLIRGFCRQGRIEEASELITRMIGDGVSPDC--ITYTT 841

Query: 973  LIYSFSKAMKIDQAFELYNDMIRQGVIPDLGTFVHLIMGLVKVSRWEEALQLSDSICQMD 1007
            +I    +   + +A EL+N M  +G+ PD   +  LI G        +A +L + + +  
Sbjct: 842  MINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 888

[Close]

BLAST of CmaCh17G005880 vs. TAIR 10
Match: AT3G06920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 282.7 bits (722), Expect = 1.1e-75
Identity = 202/757 (26.68%), Postives = 340/757 (44.91%), Query Frame = 0


Query: 282  MSELGFN-MDEFTLGLFAQALCKVGKWREALSLIEKEDFVPN-TILYTKMISGLCDASFF 341
            +S L F    EF +G+  + L  V +  E     E+   +P+    Y  ++  +     F
Sbjct: 56   LSALSFKPQPEFVIGVL-RRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNF 115

Query: 342  EEAMDFLNRMRSSSCIPNARTYKILLCGCLNKKQLGRCKRILSMMIAEGCFPSYTIFNSL 401
            +     L  M  +   P+  T   ++ GC+   +L     ++ MM      P+++ + +L
Sbjct: 116  DALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTL 175

Query: 402  VHAYCKTGDFSYAYKLLKKMEKCECKPGYVVYNILIGGICNGKELPGPITFELAEKAYNE 461
            + A+           L ++M++   +P   ++  LI G    KE        L ++  + 
Sbjct: 176  IGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGF--AKEGRVDSALSLLDEMKSS 235

Query: 462  MCSSGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFIPDTSTYSEVIGFMCNASR 521
               +  VL  V + SF +     GK + A+K  HE+  NG  PD  TY+ +IG +C A+R
Sbjct: 236  SLDADIVLYNVCIDSFGK----VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANR 295

Query: 522  VENAFLLFKEMKGAGMVPDVYTYTILIDCFSKAGLIQQAHNWLDEMVRDGCEPTVVTYTT 581
            ++ A  +F+ ++    VP  Y Y  +I  +  AG   +A++ L+     G  P+V+ Y  
Sbjct: 296  LDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC 355

Query: 582  LIHAYLKAKKVSVANELFEVMIAKGCIPNVITYTALIDGYSKSGNIENACQIYARMRGDA 641
            ++    K  KV  A ++FE M  K   PN+ TY  LID   ++G ++ A ++   M+   
Sbjct: 356  ILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQ--- 415

Query: 642  DIPDVDMYFKTENNVSEKPNVVTYGALVDGLCKAHKVKDACDLLETMFSEGCEPNNIVYD 701
                              PNV T   +VD LCK+ K+ +AC + E M  + C P+ I + 
Sbjct: 416  -------------KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFC 475

Query: 702  ALIDGFCKAAKLDEAQEVFVKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLEN 761
            +LIDG  K  ++D+A +V+ KM++     N   Y+SLI   F   R +   K+   M+  
Sbjct: 476  SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 535

Query: 762  SCAPNVVI-----------------------------------YTEMIDGLCKVAKTDEA 821
            +C+P++ +                                   Y+ +I GL K    +E 
Sbjct: 536  NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET 595

Query: 822  YKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTVLINH 881
            Y+L   M+E+GC  +   Y  +IDGF K GKV+K  +L  EM +KG  P  VTY  +I+ 
Sbjct: 596  YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDG 655

Query: 882  CCASGCLDEAYALLDEMKQTYWPKHVSSYCKVVEGYNREFILSLG--ILEEVEKNDATPI 941
                  LDEAY L +E K      +V  Y  +++G+ +   +     ILEE+ +   TP 
Sbjct: 656  LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 715

Query: 942  ILLYRVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTTLIYSFSKAMKIDQAFEL 1000
            +  +  L+D  VKA  +  AL   + +    +     +  Y  LI    K  K ++AF  
Sbjct: 716  LYTWNSLLDALVKAEEINEALVCFQSM--KELKCTPNQVTYGILINGLCKVRKFNKAFVF 775

The following BLAST results are available for this feature:

BLAST of CmaCh17G005880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9X9	0.0e+00	61.68	Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidop...	[more]
Q9SZ52	1.5e-80	27.43	Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop...	[more]
Q76C99	1.2e-77	26.46	Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV...	[more]
Q9SXD1	2.5e-75	26.09	Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop...	[more]
Q9FJE6	3.3e-75	28.57	Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th...	[more]

BLAST of CmaCh17G005880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JSJ3	0.0e+00	100.00	pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Cucurbit...	[more]
A0A6J1EVK3	0.0e+00	97.44	pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Cucurbit...	[more]
A0A6J1DAP3	0.0e+00	87.20	pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Momordic...	[more]
A0A1S3BE59	0.0e+00	85.93	pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Cucumis ...	[more]
A0A5A7V4K9	0.0e+00	86.07	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of CmaCh17G005880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022992076.1	0.0e+00	100.00	pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucurbita ...	[more]
XP_023549324.1	0.0e+00	97.63	pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucurbita ...	[more]
XP_022929904.1	0.0e+00	97.44	pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucurbita ...	[more]
KAG6575348.1	0.0e+00	97.42	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
KAG7013883.1	0.0e+00	97.11	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]

BLAST of CmaCh17G005880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06710.1	0.0e+00	61.37	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G31850.1	1.1e-81	27.43	proton gradient regulation 3	[more]
AT1G62670.1	1.8e-76	26.09	rna processing factor 2	[more]
AT5G59900.1	2.3e-76	28.57	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G06920.1	1.1e-75	26.68	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 374..496 e-value: 3.3E-24 score: 87.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 790..866 e-value: 2.1E-28 score: 101.1 coord: 648..721 e-value: 8.0E-23 score: 82.9 coord: 497..567 e-value: 1.1E-19 score: 72.7 coord: 722..789 e-value: 2.5E-18 score: 68.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 868..1014 e-value: 7.7E-19 score: 70.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 267..373 e-value: 1.1E-20 score: 75.8 coord: 117..266 e-value: 2.7E-12 score: 48.4 coord: 568..647 e-value: 1.3E-23 score: 85.3
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 209..266 e-value: 1.7E-4 score: 21.6 coord: 717..772 e-value: 2.4E-9 score: 37.1
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 801..834 e-value: 7.2E-12 score: 42.7 coord: 506..539 e-value: 2.4E-5 score: 22.2 coord: 258..290 e-value: 7.6E-5 score: 20.6 coord: 610..636 e-value: 4.4E-6 score: 24.5 coord: 942..974 e-value: 7.9E-8 score: 30.0 coord: 360..392 e-value: 0.0011 score: 17.0 coord: 540..574 e-value: 4.3E-9 score: 34.0 coord: 697..730 e-value: 1.1E-6 score: 26.4 coord: 395..426 e-value: 3.9E-7 score: 27.8 coord: 325..358 e-value: 1.2E-7 score: 29.4 coord: 836..862 e-value: 4.5E-6 score: 24.5 coord: 661..694 e-value: 4.7E-8 score: 30.7 coord: 731..765 e-value: 1.4E-6 score: 26.1 coord: 477..504 e-value: 5.1E-5 score: 21.2 coord: 766..800 e-value: 1.4E-7 score: 29.3 coord: 575..609 e-value: 2.9E-8 score: 31.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 477..500 e-value: 0.11 score: 12.8 coord: 299..316 e-value: 1.1 score: 9.7 coord: 906..931 e-value: 0.067 score: 13.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 798..846 e-value: 1.8E-18 score: 66.4 coord: 502..551 e-value: 1.0E-12 score: 48.0 coord: 658..707 e-value: 6.9E-14 score: 51.8 coord: 942..987 e-value: 6.7E-8 score: 32.6 coord: 393..440 e-value: 2.4E-9 score: 37.3 coord: 321..368 e-value: 4.2E-11 score: 42.9 coord: 572..621 e-value: 4.4E-15 score: 55.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 659..693 score: 12.375365
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 468..502 score: 9.174665
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 939..973 score: 10.566751
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 255..289 score: 9.854266
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 357..391 score: 9.086975
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 503..537 score: 10.829822
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 799..833 score: 14.18398
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 392..426 score: 11.629997
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 834..868 score: 10.402331
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 538..572 score: 12.802855
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 573..607 score: 11.816339
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 322..356 score: 11.301158
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 764..798 score: 12.342482
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 694..728 score: 12.934392
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 729..763 score: 10.785976
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 608..642 score: 11.224429
None	No IPR available	PANTHER	PTHR47934	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL	coord: 106..1010
None	No IPR available	PANTHER	PTHR47934:SF6	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL	coord: 106..1010

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G005880.1	CmaCh17G005880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding