Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAACATTTTAAAGCAAAAAAAAAACACAAAAAAAAACAGAAAAGAACATGGCGAAGAAGATGATTGCAGTGTTGTTGGTGTGCATTGTGGTGGTGGCTGCATTGCAGGTTTCGAGTGCCACTGAAAGTGTGAAGGAGGCCAAATATGAGGCTAAATTTGAAGCCAAGTATAGGTTATGCTATGAAAAGTGCGAGAAGGAATGCCTTGAAAAGGGCAATGGTCAAAGCTTCTGTGAAGTTAAGTGCGATGAAGATTGTGGTGAGAAAGAAGCCGCTGGTATGCTCTCTTCCTTTTTAAATCATTTTATTCTCATCATTTTTATTTTCTCTTAATAATTAATTAATTGATTTTGTATTTGTATTTGTTTCTCAGACAAGCTACACATCAAAGTCAAGAACTGAATAATGGAATGCAAAAGAAAGAGGGCTCTTAACAAGGATCTAAGTCATTTAAATGTTTTCATTTATAAATTAATGCAATAAAATTTTCATTAATGGTCACATTTTTTTTTTTAGTTGGGTTAATCTAAACTCTGCTTTTTTGAATTATATGCTCGAATTATATGAAGCTTTCACTACTACAAACTCTCTTTCAAAATCTCTAAAACCTTCTTCTTGAACCGGGATCAGATGCTTGAGCATACGTCGCTTGGCCGTAGGTGATGCGAGAATAAATTGGC
mRNA sequence
AAAAAAAAACATTTTAAAGCAAAAAAAAAACACAAAAAAAAACAGAAAAGAACATGGCGAAGAAGATGATTGCAGTGTTGTTGGTGTGCATTGTGGTGGTGGCTGCATTGCAGGTTTCGAGTGCCACTGAAAGTGTGAAGGAGGCCAAATATGAGGCTAAATTTGAAGCCAAGTATAGGTTATGCTATGAAAAGTGCGAGAAGGAATGCCTTGAAAAGGGCAATGGTCAAAGCTTCTGTGAAGTTAAGTGCGATGAAGATTGTGGTGAGAAAGAAGCCGCTGACAAGCTACACATCAAAGTCAAGAACTGAATAATGGAATGCAAAAGAAAGAGGGCTCTTAACAAGGATCTAAGTCATTTAAATGTTTTCATTTATAAATTAATGCAATAAAATTTTCATTAATGGTCACATTTTTTTTTTTAGTTGGGTTAATCTAAACTCTGCTTTTTTGAATTATATGCTCGAATTATATGAAGCTTTCACTACTACAAACTCTCTTTCAAAATCTCTAAAACCTTCTTCTTGAACCGGGATCAGATGCTTGAGCATACGTCGCTTGGCCGTAGGTGATGCGAGAATAAATTGGC
Coding sequence (CDS)
ATGGCGAAGAAGATGATTGCAGTGTTGTTGGTGTGCATTGTGGTGGTGGCTGCATTGCAGGTTTCGAGTGCCACTGAAAGTGTGAAGGAGGCCAAATATGAGGCTAAATTTGAAGCCAAGTATAGGTTATGCTATGAAAAGTGCGAGAAGGAATGCCTTGAAAAGGGCAATGGTCAAAGCTTCTGTGAAGTTAAGTGCGATGAAGATTGTGGTGAGAAAGAAGCCGCTGACAAGCTACACATCAAAGTCAAGAACTGA
Protein sequence
MAKKMIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
Homology
BLAST of CmaCh17G005370 vs. ExPASy Swiss-Prot
Match:
O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1)
HSP 1 Score: 58.5 bits (140), Expect = 4.1e-08
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0
Query: 38 EAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKL-HIKVKN 86
EA+++ CY+ C KEC +KGNG +FCE+KCD DC K+ +KL + K KN
Sbjct: 2 EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKLENYKPKN 50
BLAST of CmaCh17G005370 vs. ExPASy TrEMBL
Match:
A0A6J1JXL5 (major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488756 PE=4 SV=1)
HSP 1 Score: 161.4 bits (407), Expect = 1.7e-36
Identity = 84/85 (98.82%), Postives = 85/85 (100.00%), Query Frame = 0
Query: 1 MAKKMIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
MAKKMIAVLLVCIVV+AALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS
Sbjct: 1 MAKKMIAVLLVCIVVMAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
Query: 61 FCEVKCDEDCGEKEAADKLHIKVKN 86
FCEVKCDEDCGEKEAADKLHIKVKN
Sbjct: 61 FCEVKCDEDCGEKEAADKLHIKVKN 85
BLAST of CmaCh17G005370 vs. ExPASy TrEMBL
Match:
A0A6J1EQ21 (major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354 PE=4 SV=1)
HSP 1 Score: 161.0 bits (406), Expect = 2.2e-36
Identity = 84/85 (98.82%), Postives = 84/85 (98.82%), Query Frame = 0
Query: 1 MAKKMIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
MAKKMIAVLLVCIVVVAALQVSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS
Sbjct: 1 MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
Query: 61 FCEVKCDEDCGEKEAADKLHIKVKN 86
FCEVKCDEDCGEKEAADKLHIKVKN
Sbjct: 61 FCEVKCDEDCGEKEAADKLHIKVKN 85
BLAST of CmaCh17G005370 vs. ExPASy TrEMBL
Match:
A0A6J1JWQ7 (major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488152 PE=4 SV=1)
HSP 1 Score: 154.5 bits (389), Expect = 2.0e-34
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0
Query: 5 MIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEV 64
MIAVLLVCIVV+AALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEV
Sbjct: 1 MIAVLLVCIVVMAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEV 60
Query: 65 KCDEDCGEKEAADKLHIKVKN 86
KCDEDCGEKEAADKLHIKVKN
Sbjct: 61 KCDEDCGEKEAADKLHIKVKN 81
BLAST of CmaCh17G005370 vs. ExPASy TrEMBL
Match:
A0A6J1JVQ4 (major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488292 PE=4 SV=1)
HSP 1 Score: 152.9 bits (385), Expect = 6.0e-34
Identity = 80/85 (94.12%), Postives = 82/85 (96.47%), Query Frame = 0
Query: 1 MAKKMIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
MAKK+IAVLLVCIVV+AALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGN QS
Sbjct: 1 MAKKIIAVLLVCIVVMAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNDQS 60
Query: 61 FCEVKCDEDCGEKEAADKLHIKVKN 86
FCEVKCDEDC EKE ADKLHIKVKN
Sbjct: 61 FCEVKCDEDCDEKEVADKLHIKVKN 85
BLAST of CmaCh17G005370 vs. ExPASy TrEMBL
Match:
A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)
HSP 1 Score: 118.2 bits (295), Expect = 1.6e-23
Identity = 59/83 (71.08%), Postives = 72/83 (86.75%), Query Frame = 0
Query: 1 MAKKMIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
MAKKMIA+ L+CIVVVAALQ +SA + + AKYEAKF+AKY+ C++ CEKECLE G+GQS
Sbjct: 1 MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60
Query: 61 FCEVKCDEDCGEKEAADKLHIKV 84
+CEVKCDEDC EKE ADKLHI++
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIEL 83
BLAST of CmaCh17G005370 vs. NCBI nr
Match:
XP_022992458.1 (major pollen allergen Ole e 6-like [Cucurbita maxima] >XP_022992459.1 major pollen allergen Ole e 6-like [Cucurbita maxima])
HSP 1 Score: 161.4 bits (407), Expect = 3.5e-36
Identity = 84/85 (98.82%), Postives = 85/85 (100.00%), Query Frame = 0
Query: 1 MAKKMIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
MAKKMIAVLLVCIVV+AALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS
Sbjct: 1 MAKKMIAVLLVCIVVMAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
Query: 61 FCEVKCDEDCGEKEAADKLHIKVKN 86
FCEVKCDEDCGEKEAADKLHIKVKN
Sbjct: 61 FCEVKCDEDCGEKEAADKLHIKVKN 85
BLAST of CmaCh17G005370 vs. NCBI nr
Match:
XP_022929811.1 (major pollen allergen Ole e 6-like [Cucurbita moschata] >XP_022929878.1 major pollen allergen Ole e 6-like [Cucurbita moschata] >XP_022929879.1 major pollen allergen Ole e 6-like [Cucurbita moschata] >XP_022929880.1 major pollen allergen Ole e 6-like [Cucurbita moschata])
HSP 1 Score: 161.0 bits (406), Expect = 4.5e-36
Identity = 84/85 (98.82%), Postives = 84/85 (98.82%), Query Frame = 0
Query: 1 MAKKMIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
MAKKMIAVLLVCIVVVAALQVSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS
Sbjct: 1 MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
Query: 61 FCEVKCDEDCGEKEAADKLHIKVKN 86
FCEVKCDEDCGEKEAADKLHIKVKN
Sbjct: 61 FCEVKCDEDCGEKEAADKLHIKVKN 85
BLAST of CmaCh17G005370 vs. NCBI nr
Match:
KAG6575285.1 (Major pollen allergen Ole e 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG6575288.1 Major pollen allergen Ole e 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG6575294.1 Major pollen allergen Ole e 6, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 159.5 bits (402), Expect = 1.3e-35
Identity = 83/85 (97.65%), Postives = 84/85 (98.82%), Query Frame = 0
Query: 1 MAKKMIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
MAKKMIAVLLVCIVVVAALQVSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS
Sbjct: 1 MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
Query: 61 FCEVKCDEDCGEKEAADKLHIKVKN 86
FCEVKCDEDCGEKEAADKLHIKV+N
Sbjct: 61 FCEVKCDEDCGEKEAADKLHIKVEN 85
BLAST of CmaCh17G005370 vs. NCBI nr
Match:
XP_023549457.1 (major pollen allergen Ole e 6-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 156.8 bits (395), Expect = 8.5e-35
Identity = 82/85 (96.47%), Postives = 82/85 (96.47%), Query Frame = 0
Query: 1 MAKKMIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
MAKKMIAVLLVCIVVV ALQVSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS
Sbjct: 1 MAKKMIAVLLVCIVVVGALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
Query: 61 FCEVKCDEDCGEKEAADKLHIKVKN 86
FCEVKCDEDC EKEAADKLHIKVKN
Sbjct: 61 FCEVKCDEDCDEKEAADKLHIKVKN 85
BLAST of CmaCh17G005370 vs. NCBI nr
Match:
XP_023548654.1 (major pollen allergen Ole e 6-like [Cucurbita pepo subsp. pepo] >XP_023549436.1 major pollen allergen Ole e 6-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 156.4 bits (394), Expect = 1.1e-34
Identity = 81/85 (95.29%), Postives = 82/85 (96.47%), Query Frame = 0
Query: 1 MAKKMIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
MAKKMIAVLLVC+VVV ALQVSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS
Sbjct: 1 MAKKMIAVLLVCVVVVGALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
Query: 61 FCEVKCDEDCGEKEAADKLHIKVKN 86
FCEVKCDEDC EKEAADKLHIKVKN
Sbjct: 61 FCEVKCDEDCDEKEAADKLHIKVKN 85
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
O24172 | 4.1e-08 | 53.06 | Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1JXL5 | 1.7e-36 | 98.82 | major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488756 P... | [more] |
A0A6J1EQ21 | 2.2e-36 | 98.82 | major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354... | [more] |
A0A6J1JWQ7 | 2.0e-34 | 98.77 | major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488152 P... | [more] |
A0A6J1JVQ4 | 6.0e-34 | 94.12 | major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488292 P... | [more] |
A0A5D3BCS2 | 1.6e-23 | 71.08 | Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... | [more] |
Match Name | E-value | Identity | Description | |
XP_022992458.1 | 3.5e-36 | 98.82 | major pollen allergen Ole e 6-like [Cucurbita maxima] >XP_022992459.1 major poll... | [more] |
XP_022929811.1 | 4.5e-36 | 98.82 | major pollen allergen Ole e 6-like [Cucurbita moschata] >XP_022929878.1 major po... | [more] |
KAG6575285.1 | 1.3e-35 | 97.65 | Major pollen allergen Ole e 6, partial [Cucurbita argyrosperma subsp. sororia] >... | [more] |
XP_023549457.1 | 8.5e-35 | 96.47 | major pollen allergen Ole e 6-like [Cucurbita pepo subsp. pepo] | [more] |
XP_023548654.1 | 1.1e-34 | 95.29 | major pollen allergen Ole e 6-like [Cucurbita pepo subsp. pepo] >XP_023549436.1 ... | [more] |
Match Name | E-value | Identity | Description | |