CmaCh17G005370 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G005370
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	major pollen allergen Ole e 6-like
Location	Cma_Chr17: 4188515 .. 4189199 (+)
RNA-Seq Expression	CmaCh17G005370
Synteny	CmaCh17G005370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAACATTTTAAAGCAAAAAAAAAACACAAAAAAAAACAGAAAAGAACATGGCGAAGAAGATGATTGCAGTGTTGTTGGTGTGCATTGTGGTGGTGGCTGCATTGCAGGTTTCGAGTGCCACTGAAAGTGTGAAGGAGGCCAAATATGAGGCTAAATTTGAAGCCAAGTATAGGTTATGCTATGAAAAGTGCGAGAAGGAATGCCTTGAAAAGGGCAATGGTCAAAGCTTCTGTGAAGTTAAGTGCGATGAAGATTGTGGTGAGAAAGAAGCCGCTGGTATGCTCTCTTCCTTTTTAAATCATTTTATTCTCATCATTTTTATTTTCTCTTAATAATTAATTAATTGATTTTGTATTTGTATTTGTTTCTCAGACAAGCTACACATCAAAGTCAAGAACTGAATAATGGAATGCAAAAGAAAGAGGGCTCTTAACAAGGATCTAAGTCATTTAAATGTTTTCATTTATAAATTAATGCAATAAAATTTTCATTAATGGTCACATTTTTTTTTTTAGTTGGGTTAATCTAAACTCTGCTTTTTTGAATTATATGCTCGAATTATATGAAGCTTTCACTACTACAAACTCTCTTTCAAAATCTCTAAAACCTTCTTCTTGAACCGGGATCAGATGCTTGAGCATACGTCGCTTGGCCGTAGGTGATGCGAGAATAAATTGGC

mRNA sequence

AAAAAAAAACATTTTAAAGCAAAAAAAAAACACAAAAAAAAACAGAAAAGAACATGGCGAAGAAGATGATTGCAGTGTTGTTGGTGTGCATTGTGGTGGTGGCTGCATTGCAGGTTTCGAGTGCCACTGAAAGTGTGAAGGAGGCCAAATATGAGGCTAAATTTGAAGCCAAGTATAGGTTATGCTATGAAAAGTGCGAGAAGGAATGCCTTGAAAAGGGCAATGGTCAAAGCTTCTGTGAAGTTAAGTGCGATGAAGATTGTGGTGAGAAAGAAGCCGCTGACAAGCTACACATCAAAGTCAAGAACTGAATAATGGAATGCAAAAGAAAGAGGGCTCTTAACAAGGATCTAAGTCATTTAAATGTTTTCATTTATAAATTAATGCAATAAAATTTTCATTAATGGTCACATTTTTTTTTTTAGTTGGGTTAATCTAAACTCTGCTTTTTTGAATTATATGCTCGAATTATATGAAGCTTTCACTACTACAAACTCTCTTTCAAAATCTCTAAAACCTTCTTCTTGAACCGGGATCAGATGCTTGAGCATACGTCGCTTGGCCGTAGGTGATGCGAGAATAAATTGGC

Coding sequence (CDS)

ATGGCGAAGAAGATGATTGCAGTGTTGTTGGTGTGCATTGTGGTGGTGGCTGCATTGCAGGTTTCGAGTGCCACTGAAAGTGTGAAGGAGGCCAAATATGAGGCTAAATTTGAAGCCAAGTATAGGTTATGCTATGAAAAGTGCGAGAAGGAATGCCTTGAAAAGGGCAATGGTCAAAGCTTCTGTGAAGTTAAGTGCGATGAAGATTGTGGTGAGAAAGAAGCCGCTGACAAGCTACACATCAAAGTCAAGAACTGA

Protein sequence

MAKKMIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN

Homology

[Close]

BLAST of CmaCh17G005370 vs. ExPASy Swiss-Prot
Match: O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.1e-08
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0


Query: 38 EAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKL-HIKVKN 86
          EA+++ CY+ C KEC +KGNG +FCE+KCD DC  K+  +KL + K KN
Sbjct: 2  EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKLENYKPKN 50

[Close]

BLAST of CmaCh17G005370 vs. ExPASy TrEMBL
Match: A0A6J1JXL5 (major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488756 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.7e-36
Identity = 84/85 (98.82%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1  MAKKMIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
          MAKKMIAVLLVCIVV+AALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS
Sbjct: 1  MAKKMIAVLLVCIVVMAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60

Query: 61 FCEVKCDEDCGEKEAADKLHIKVKN 86
          FCEVKCDEDCGEKEAADKLHIKVKN
Sbjct: 61 FCEVKCDEDCGEKEAADKLHIKVKN 85

[Close]

BLAST of CmaCh17G005370 vs. ExPASy TrEMBL
Match: A0A6J1EQ21 (major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.2e-36
Identity = 84/85 (98.82%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 1  MAKKMIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
          MAKKMIAVLLVCIVVVAALQVSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS
Sbjct: 1  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60

Query: 61 FCEVKCDEDCGEKEAADKLHIKVKN 86
          FCEVKCDEDCGEKEAADKLHIKVKN
Sbjct: 61 FCEVKCDEDCGEKEAADKLHIKVKN 85

[Close]

BLAST of CmaCh17G005370 vs. ExPASy TrEMBL
Match: A0A6J1JWQ7 (major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488152 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.0e-34
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 5  MIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEV 64
          MIAVLLVCIVV+AALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEV
Sbjct: 1  MIAVLLVCIVVMAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEV 60

Query: 65 KCDEDCGEKEAADKLHIKVKN 86
          KCDEDCGEKEAADKLHIKVKN
Sbjct: 61 KCDEDCGEKEAADKLHIKVKN 81

[Close]

BLAST of CmaCh17G005370 vs. ExPASy TrEMBL
Match: A0A6J1JVQ4 (major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488292 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.0e-34
Identity = 80/85 (94.12%), Postives = 82/85 (96.47%), Query Frame = 0


Query: 1  MAKKMIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
          MAKK+IAVLLVCIVV+AALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGN QS
Sbjct: 1  MAKKIIAVLLVCIVVMAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNDQS 60

Query: 61 FCEVKCDEDCGEKEAADKLHIKVKN 86
          FCEVKCDEDC EKE ADKLHIKVKN
Sbjct: 61 FCEVKCDEDCDEKEVADKLHIKVKN 85

[Close]

BLAST of CmaCh17G005370 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-23
Identity = 59/83 (71.08%), Postives = 72/83 (86.75%), Query Frame = 0


Query: 1  MAKKMIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
          MAKKMIA+ L+CIVVVAALQ +SA +  + AKYEAKF+AKY+ C++ CEKECLE G+GQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCGEKEAADKLHIKV 84
          +CEVKCDEDC EKE ADKLHI++
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIEL 83

[Close]

BLAST of CmaCh17G005370 vs. NCBI nr
Match: XP_022992458.1 (major pollen allergen Ole e 6-like [Cucurbita maxima] >XP_022992459.1 major pollen allergen Ole e 6-like [Cucurbita maxima])

HSP 1 Score: 161.4 bits (407), Expect = 3.5e-36
Identity = 84/85 (98.82%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1  MAKKMIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
          MAKKMIAVLLVCIVV+AALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS
Sbjct: 1  MAKKMIAVLLVCIVVMAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60

Query: 61 FCEVKCDEDCGEKEAADKLHIKVKN 86
          FCEVKCDEDCGEKEAADKLHIKVKN
Sbjct: 61 FCEVKCDEDCGEKEAADKLHIKVKN 85

[Close]

BLAST of CmaCh17G005370 vs. NCBI nr
Match: XP_022929811.1 (major pollen allergen Ole e 6-like [Cucurbita moschata] >XP_022929878.1 major pollen allergen Ole e 6-like [Cucurbita moschata] >XP_022929879.1 major pollen allergen Ole e 6-like [Cucurbita moschata] >XP_022929880.1 major pollen allergen Ole e 6-like [Cucurbita moschata])

HSP 1 Score: 161.0 bits (406), Expect = 4.5e-36
Identity = 84/85 (98.82%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 1  MAKKMIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
          MAKKMIAVLLVCIVVVAALQVSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS
Sbjct: 1  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60

Query: 61 FCEVKCDEDCGEKEAADKLHIKVKN 86
          FCEVKCDEDCGEKEAADKLHIKVKN
Sbjct: 61 FCEVKCDEDCGEKEAADKLHIKVKN 85

[Close]

BLAST of CmaCh17G005370 vs. NCBI nr
Match: KAG6575285.1 (Major pollen allergen Ole e 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG6575288.1 Major pollen allergen Ole e 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG6575294.1 Major pollen allergen Ole e 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 159.5 bits (402), Expect = 1.3e-35
Identity = 83/85 (97.65%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 1  MAKKMIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
          MAKKMIAVLLVCIVVVAALQVSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS
Sbjct: 1  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60

Query: 61 FCEVKCDEDCGEKEAADKLHIKVKN 86
          FCEVKCDEDCGEKEAADKLHIKV+N
Sbjct: 61 FCEVKCDEDCGEKEAADKLHIKVEN 85

[Close]

BLAST of CmaCh17G005370 vs. NCBI nr
Match: XP_023549457.1 (major pollen allergen Ole e 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 156.8 bits (395), Expect = 8.5e-35
Identity = 82/85 (96.47%), Postives = 82/85 (96.47%), Query Frame = 0


Query: 1  MAKKMIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
          MAKKMIAVLLVCIVVV ALQVSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS
Sbjct: 1  MAKKMIAVLLVCIVVVGALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60

Query: 61 FCEVKCDEDCGEKEAADKLHIKVKN 86
          FCEVKCDEDC EKEAADKLHIKVKN
Sbjct: 61 FCEVKCDEDCDEKEAADKLHIKVKN 85

[Close]

BLAST of CmaCh17G005370 vs. NCBI nr
Match: XP_023548654.1 (major pollen allergen Ole e 6-like [Cucurbita pepo subsp. pepo] >XP_023549436.1 major pollen allergen Ole e 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 156.4 bits (394), Expect = 1.1e-34
Identity = 81/85 (95.29%), Postives = 82/85 (96.47%), Query Frame = 0


Query: 1  MAKKMIAVLLVCIVVVAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
          MAKKMIAVLLVC+VVV ALQVSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS
Sbjct: 1  MAKKMIAVLLVCVVVVGALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60

Query: 61 FCEVKCDEDCGEKEAADKLHIKVKN 86
          FCEVKCDEDC EKEAADKLHIKVKN
Sbjct: 61 FCEVKCDEDCDEKEAADKLHIKVKN 85

The following BLAST results are available for this feature:

BLAST of CmaCh17G005370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24172	4.1e-08	53.06	Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1	[more]

BLAST of CmaCh17G005370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JXL5	1.7e-36	98.82	major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488756 P...	[more]
A0A6J1EQ21	2.2e-36	98.82	major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354...	[more]
A0A6J1JWQ7	2.0e-34	98.77	major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488152 P...	[more]
A0A6J1JVQ4	6.0e-34	94.12	major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488292 P...	[more]
A0A5D3BCS2	1.6e-23	71.08	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of CmaCh17G005370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022992458.1	3.5e-36	98.82	major pollen allergen Ole e 6-like [Cucurbita maxima] >XP_022992459.1 major poll...	[more]
XP_022929811.1	4.5e-36	98.82	major pollen allergen Ole e 6-like [Cucurbita moschata] >XP_022929878.1 major po...	[more]
KAG6575285.1	1.3e-35	97.65	Major pollen allergen Ole e 6, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]
XP_023549457.1	8.5e-35	96.47	major pollen allergen Ole e 6-like [Cucurbita pepo subsp. pepo]	[more]
XP_023548654.1	1.1e-34	95.29	major pollen allergen Ole e 6-like [Cucurbita pepo subsp. pepo] >XP_023549436.1 ...	[more]

BLAST of CmaCh17G005370 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015333	Pollen allergen ole e 6	PFAM	PF09253	Ole_e_6	coord: 44..80 e-value: 6.6E-13 score: 48.4
IPR015333	Pollen allergen ole e 6	PANTHER	PTHR35632	MAJOR POLLEN ALLERGEN OLE E 6-LIKE	coord: 1..84
IPR036466	Pollen allergen ole e 6 superfamily	GENE3D	1.10.287.720	Pollen allergen ole e 6	coord: 37..85 e-value: 9.0E-17 score: 62.3
IPR036466	Pollen allergen ole e 6 superfamily	SUPERFAMILY	111388	Pollen allergen ole e 6	coord: 38..79
None	No IPR available	PANTHER	PTHR35632:SF5	SUBFAMILY NOT NAMED	coord: 1..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G005370.1	CmaCh17G005370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016121	carotene catabolic process
biological_process	GO:0009733	response to auxin
biological_process	GO:0010223	secondary shoot formation
biological_process	GO:1901601	strigolactone biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen