CmaCh16G000210 (gene) Cucurbita maxima (Rimu) v1.1

InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Position :
0
Zoom :
x 1
GGCAGATGGGCATTTTGGGAATTAATAAAAGTTTGGTGTCCCTGAAATATGTTGAGAGGAAGGGGAAGGGGGCGTACCAAAAATTTCATCTCATCGGTCATTTCTGGGATGCTGTGAAAGGAGGCCCCAAGAGATAGTCCACCGCAATCCGACGATCTGAGCAATCAACCTACACACTCCTCCTTCCCTCTTTCTTTCTTTCTCGATTTCTACACTAATTACCAAACGGGAAACTCACACTTCGCTTCTCTCTCTTTCTCTCGCTCTCCACCTTTTTGTTAATTCGTACACAGGGTTTTTCGTTTTCGTTTCGATCCTCTTCAATTTCGTTTCTCTTCTCTTACTTCTTCTACTCCACGATCTCCTCCTGGGTTTCGCCGTTTTCCAATGGAAATGTATTAGATAAGCCCTCTCCCCCCATCAGAATAAGATTGTGAAAGAACGATCTAGTTGCACAAACCTCTTTCCCATCATGGCGGTTGCTGAGAATGTTGGACCCAAAATCGGCTCTCCAAGTCAAAGTTTTGAAAACACGATGCTTTCCTCCGATTCTAATGATCCCAAGGATGTCGAAAATCAGAAGCCTAAGAACGATTCTGCGGTTTCGATTAATGCAGAACCCGACTTTCATCCCAACGGAATCGATCAGAATACACAGAAGAAGGCACACCTCCAGGAGAGAGCTGCTGCCGCAGCTTCTTTTGCACTTCCTTCACCCAATTTCAAGTCCCAAATGGGTCAGATGCAGAACGGGTTTGAAACTAATGCCCAGTCGCTAATGGTGAAGTCTGCTGGTGGTTATGGGATGAATCAGAGGCCTAATGGAGTGATAAACGGAGCCGATGGAGGGGAAAACTTTAAGAGGGATATGAGGGATCTGGAGGACTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTGTTCCTCCTTCGCTAGCTAAAAATTTTTCTGGTTACTTCGGCGGTGCTGCCCTTGGGTATACGAACGACTTTCTATTGCAAGCTAATTCTCTCAACAACGAAGGGAATAATAATCGAAGGAAGAAGAATGGTTTTAGTCAAGGAAGACGGAAGACGAATAATAAGATGAATGCAGTGAAGCGAGATGAGATGACCCGGAGGACGGTGTATGTATCAGACATTGATCAGCAGGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTAACTGTGGAGAGGTTGTTGACTGTCGTATCTGTGGTGATCCCAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACTGATGAAGAGGGTGCAAGGGCTTCCTTGAATCTTTCAGGGACAGTGCTTGGTTTTTATCCAGTCAGAGTGCTGCCCTCAAAAACTGCAATAGCACCTGTCAATCCTGAATTTTTACCCAGGTCGGATGACGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTTACTCAAGCAGAGGTCAAGCTGTTCTTTGAATCATTATGTGGAGAGGTTCAGCGCCTTAGGCTACTTGGAGATTATCATCATTCCACTCGTATAGCATTTGTTGAGTTTACAATGGCTGAGAGTGCAATTGCTGCTCTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTGCCAATAAGGGTGAGCCCATCAAAGACCCCAGTTCGTCCTCGCTCTCCTCGTGCCCAGCTGAACTGA2004006008001000120014001600Expect = 4.8E-13 / Score = 59.3Expect = 1.9E-11 / Score = 54.1Expect = 1.2E-10 / Score = 41.0Expect = 6.0E-9 / Score = 35.6Score = 13.225495Score = 11.929285Expect = 7.1E-18 / Score = 67.0Expect = 3.3E-14 / Score = 55.1Score = Score = Score = Score = Score = Expect = 1.2031E-60 / Score = 188.859Expect = 2.12134E-50 / Score = 162.591Score = Score = SequenceSM00360PF00076PS50102PS50102PF07145G3DSA:3.30.70.330mobidb-litemobidb-litemobidb-litePTHR32343PTHR32343:SF36cd12460cd12459SSF54928SSF54928
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 218..288
e-value: 4.8E-13
score: 59.3
coord: 315..386
e-value: 1.9E-11
score: 54.1
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 316..383
e-value: 6.0E-9
score: 35.6
coord: 219..281
e-value: 1.2E-10
score: 41.0
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 217..292
score: 13.225495
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 314..390
score: 11.929285
IPR009818Ataxin-2, C-terminalPFAMPF07145PAM2coord: 141..154
e-value: 3.4E-5
score: 23.2
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 177..294
e-value: 7.1E-18
score: 67.0
coord: 298..398
e-value: 3.3E-14
score: 55.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..205
NoneNo IPR availablePANTHERPTHR32343SERINE/ARGININE-RICH SPLICING FACTORcoord: 1..402
NoneNo IPR availablePANTHERPTHR32343:SF36POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 12-LIKEcoord: 1..402
IPR034825CID8-like protein, RNA recognition motif 2CDDcd12460RRM2_CID8_likecoord: 310..391
e-value: 1.2031E-60
score: 188.859
IPR034823CID8-like protein, RNA recognition motif 1CDDcd12459RRM1_CID8_likecoord: 216..294
e-value: 2.12134E-50
score: 162.591
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 304..396
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 181..293