Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAACTCATGTGCTTCCTACAGAGCCATCTTGCCTTGTTGCCTCAAGGTCGATGCAGCACACAAGCAGGTGGAACCTTTGAAGATTGTTAAACCAGACGGAAAGGTGTTGGAGCTCACCACGCCAACGCTCAAACCCAGCCTCATGGATGATTCAGACAAACCCAGCAGCACAAGGAGAGTAAGAATCGTTTTAACAAAGAAACAGCTCAAGCTGCTGGTGGACAAACAAGTGTCAATGGAAGAGCTAATTATGCAGCGGATTGAGAAAACCACGTTGTGCAGTGTTCTTGAATGTTCATCATCTTGGAAGCCTGCGCTGGCAGCCATTCCTGAAGGAAATGAAGCATAA
mRNA sequence
ATGGGTAACTCATGTGCTTCCTACAGAGCCATCTTGCCTTGTTGCCTCAAGGTCGATGCAGCACACAAGCAGGTGGAACCTTTGAAGATTGTTAAACCAGACGGAAAGGTGTTGGAGCTCACCACGCCAACGCTCAAACCCAGCCTCATGGATGATTCAGACAAACCCAGCAGCACAAGGAGAGTAAGAATCGTTTTAACAAAGAAACAGCTCAAGCTGCTGGTGGACAAACAAGTGTCAATGGAAGAGCTAATTATGCAGCGGATTGAGAAAACCACGTTGTGCAGTGTTCTTGAATGTTCATCATCTTGGAAGCCTGCGCTGGCAGCCATTCCTGAAGGAAATGAAGCATAA
Coding sequence (CDS)
ATGGGTAACTCATGTGCTTCCTACAGAGCCATCTTGCCTTGTTGCCTCAAGGTCGATGCAGCACACAAGCAGGTGGAACCTTTGAAGATTGTTAAACCAGACGGAAAGGTGTTGGAGCTCACCACGCCAACGCTCAAACCCAGCCTCATGGATGATTCAGACAAACCCAGCAGCACAAGGAGAGTAAGAATCGTTTTAACAAAGAAACAGCTCAAGCTGCTGGTGGACAAACAAGTGTCAATGGAAGAGCTAATTATGCAGCGGATTGAGAAAACCACGTTGTGCAGTGTTCTTGAATGTTCATCATCTTGGAAGCCTGCGCTGGCAGCCATTCCTGAAGGAAATGAAGCATAA
Protein sequence
MGNSCASYRAILPCCLKVDAAHKQVEPLKIVKPDGKVLELTTPTLKPSLMDDSDKPSSTRRVRIVLTKKQLKLLVDKQVSMEELIMQRIEKTTLCSVLECSSSWKPALAAIPEGNEA
Homology
BLAST of CmaCh15G009980 vs. ExPASy TrEMBL
Match:
A0A6J1E387 (uncharacterized protein LOC111430396 OS=Cucurbita moschata OX=3662 GN=LOC111430396 PE=4 SV=1)
HSP 1 Score: 216.1 bits (549), Expect = 7.9e-53
Identity = 111/117 (94.87%), Postives = 113/117 (96.58%), Query Frame = 0
Query: 1 MGNSCASYRAILPCCLKVDAAHKQVEPLKIVKPDGKVLELTTPTLKPSLMDDSDKPSSTR 60
MGNSCASYRAILPCCLKVDAAH QVE LKIVKPDGKVL TTPTLKPSLMDDSDKPSSTR
Sbjct: 1 MGNSCASYRAILPCCLKVDAAHNQVEALKIVKPDGKVLGFTTPTLKPSLMDDSDKPSSTR 60
Query: 61 RVRIVLTKKQLKLLVDKQVSMEELIMQRIEKTTLCSVLECSSSWKPALAAIPEGNEA 118
RVRIVLTKKQLKLLVDKQVSMEEL+MQ+IEKTTLCSVLECSSSWKPALAAIPEGNEA
Sbjct: 61 RVRIVLTKKQLKLLVDKQVSMEELLMQQIEKTTLCSVLECSSSWKPALAAIPEGNEA 117
BLAST of CmaCh15G009980 vs. ExPASy TrEMBL
Match:
A0A0A0KN21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G138490 PE=4 SV=1)
HSP 1 Score: 123.2 bits (308), Expect = 7.0e-25
Identity = 84/170 (49.41%), Postives = 94/170 (55.29%), Query Frame = 0
Query: 1 MGNS-CASYRAILPCCLKVDAAHKQ--VEPLKIVKPDGKVLELTTPTL------------ 60
MGNS C SY PCCLKVDAAHKQ E LKIVK DGKVLE TTPTL
Sbjct: 1 MGNSCCVSYTIKFPCCLKVDAAHKQNHGEALKIVKSDGKVLEFTTPTLVKDVLVNFTGFV 60
Query: 61 --------------------------------------KPSLMDDSDKPSSTRRVRIVLT 118
S + DS K STRRVRIVLT
Sbjct: 61 IGSSQDVSHHHHLSPEFELKMGQVYYMLPSPQPTALPPPHSFIQDSHKSRSTRRVRIVLT 120
BLAST of CmaCh15G009980 vs. ExPASy TrEMBL
Match:
A0A5A7TGH5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00040 PE=4 SV=1)
HSP 1 Score: 118.6 bits (296), Expect = 1.7e-23
Identity = 80/170 (47.06%), Postives = 94/170 (55.29%), Query Frame = 0
Query: 1 MGNS-CASYRAILPCCLKVDAAHKQ--VEPLKIVKPDGKVLELTTPTLKPSLM------- 60
MGNS C SY PCCLKVDAAHKQ E LKIVK DGKVL+ TTPTL ++
Sbjct: 1 MGNSCCVSYTIKFPCCLKVDAAHKQNHGEALKIVKSDGKVLQFTTPTLVKDVLVNFTGFV 60
Query: 61 -------------------------------------------DDSDKPSSTRRVRIVLT 118
D K SSTRRVRIVLT
Sbjct: 61 IGSSQDVSDHHHLSPDFELKMGQVYYMLPSPQAAAPPPPHTFIQDLHKSSSTRRVRIVLT 120
BLAST of CmaCh15G009980 vs. ExPASy TrEMBL
Match:
A0A1S3AUP7 (uncharacterized protein LOC103483007 OS=Cucumis melo OX=3656 GN=LOC103483007 PE=4 SV=1)
HSP 1 Score: 118.6 bits (296), Expect = 1.7e-23
Identity = 80/170 (47.06%), Postives = 94/170 (55.29%), Query Frame = 0
Query: 1 MGNS-CASYRAILPCCLKVDAAHKQ--VEPLKIVKPDGKVLELTTPTLKPSLM------- 60
MGNS C SY PCCLKVDAAHKQ E LKIVK DGKVL+ TTPTL ++
Sbjct: 1 MGNSCCVSYTIKFPCCLKVDAAHKQNHGEALKIVKSDGKVLQFTTPTLVKDVLVNFTGFV 60
Query: 61 -------------------------------------------DDSDKPSSTRRVRIVLT 118
D K SSTRRVRIVLT
Sbjct: 61 IGSSQDVSDHHHLSPDFELKMGQVYYMLPSPQAAAPPPPHTFIQDLHKSSSTRRVRIVLT 120
BLAST of CmaCh15G009980 vs. ExPASy TrEMBL
Match:
A0A5N6RF31 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_016172 PE=4 SV=1)
HSP 1 Score: 60.8 bits (146), Expect = 4.2e-06
Identity = 48/158 (30.38%), Postives = 75/158 (47.47%), Query Frame = 0
Query: 1 MGNSCASYRAILPCCLKVDAAHKQVEPLKIVKPDGKVLELTTPTLKPSLM---------- 60
MGN A + C+ D A K L++VK DGKVLE + PT+ ++
Sbjct: 1 MGNCVAPCKTRKELCI-TDVAAKPERVLQVVKMDGKVLEFSMPTIVKDILVNFSGTGIGL 60
Query: 61 -------------------------------DDSDKPS-STRRVRIVLTKKQLKLLVDKQ 117
DD +K +R++IV+TK+QL+ L+ KQ
Sbjct: 61 SKEASEHLPPNYELKMGKVYYMLPADISSTPDDVEKADRGVKRIKIVITKQQLQDLLTKQ 120
BLAST of CmaCh15G009980 vs. NCBI nr
Match:
XP_023551614.1 (uncharacterized protein LOC111809394 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 221.5 bits (563), Expect = 3.9e-54
Identity = 112/117 (95.73%), Postives = 117/117 (100.00%), Query Frame = 0
Query: 1 MGNSCASYRAILPCCLKVDAAHKQVEPLKIVKPDGKVLELTTPTLKPSLMDDSDKPSSTR 60
MGNSCASYRAILPCCLKVDAAHKQVEPL+IVKPDGKVLELTTPTLKP+LMDDSDKPSSTR
Sbjct: 1 MGNSCASYRAILPCCLKVDAAHKQVEPLEIVKPDGKVLELTTPTLKPNLMDDSDKPSSTR 60
Query: 61 RVRIVLTKKQLKLLVDKQVSMEELIMQRIEKTTLCSVLECSSSWKPALAAIPEGNEA 118
RV+IVLTKKQLKLLVDKQVSMEEL+MQ+IEKTTLCSVLECSSSWKPALAAIPEGNEA
Sbjct: 61 RVKIVLTKKQLKLLVDKQVSMEELLMQQIEKTTLCSVLECSSSWKPALAAIPEGNEA 117
BLAST of CmaCh15G009980 vs. NCBI nr
Match:
XP_022922389.1 (uncharacterized protein LOC111430396 [Cucurbita moschata] >KAG7016794.1 hypothetical protein SDJN02_21905, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 216.1 bits (549), Expect = 1.6e-52
Identity = 111/117 (94.87%), Postives = 113/117 (96.58%), Query Frame = 0
Query: 1 MGNSCASYRAILPCCLKVDAAHKQVEPLKIVKPDGKVLELTTPTLKPSLMDDSDKPSSTR 60
MGNSCASYRAILPCCLKVDAAH QVE LKIVKPDGKVL TTPTLKPSLMDDSDKPSSTR
Sbjct: 1 MGNSCASYRAILPCCLKVDAAHNQVEALKIVKPDGKVLGFTTPTLKPSLMDDSDKPSSTR 60
Query: 61 RVRIVLTKKQLKLLVDKQVSMEELIMQRIEKTTLCSVLECSSSWKPALAAIPEGNEA 118
RVRIVLTKKQLKLLVDKQVSMEEL+MQ+IEKTTLCSVLECSSSWKPALAAIPEGNEA
Sbjct: 61 RVRIVLTKKQLKLLVDKQVSMEELLMQQIEKTTLCSVLECSSSWKPALAAIPEGNEA 117
BLAST of CmaCh15G009980 vs. NCBI nr
Match:
KAG6579294.1 (hypothetical protein SDJN03_23742, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 214.9 bits (546), Expect = 3.6e-52
Identity = 110/117 (94.02%), Postives = 113/117 (96.58%), Query Frame = 0
Query: 1 MGNSCASYRAILPCCLKVDAAHKQVEPLKIVKPDGKVLELTTPTLKPSLMDDSDKPSSTR 60
MGNSCASYRAILPCCLKVDAAH QVE LKIVKPDG+VL TTPTLKPSLMDDSDKPSSTR
Sbjct: 1 MGNSCASYRAILPCCLKVDAAHNQVEALKIVKPDGRVLGFTTPTLKPSLMDDSDKPSSTR 60
Query: 61 RVRIVLTKKQLKLLVDKQVSMEELIMQRIEKTTLCSVLECSSSWKPALAAIPEGNEA 118
RVRIVLTKKQLKLLVDKQVSMEEL+MQ+IEKTTLCSVLECSSSWKPALAAIPEGNEA
Sbjct: 61 RVRIVLTKKQLKLLVDKQVSMEELLMQQIEKTTLCSVLECSSSWKPALAAIPEGNEA 117
BLAST of CmaCh15G009980 vs. NCBI nr
Match:
XP_038875983.1 (uncharacterized protein LOC120068327 [Benincasa hispida])
HSP 1 Score: 137.1 bits (344), Expect = 9.6e-29
Identity = 88/169 (52.07%), Postives = 99/169 (58.58%), Query Frame = 0
Query: 1 MGNSCASYRAILPCCLKVDAAH--KQVEPLKIVKPDGKVLELTTPTL------------- 60
MGNSC SYR LPCCLKVDAAH KQ E LKIVK DGKVLE TPTL
Sbjct: 23 MGNSCVSYRIKLPCCLKVDAAHRKKQGEALKIVKSDGKVLEFITPTLVKDVLVNFSGFVI 82
Query: 61 -------------------------------------KPSLMDDSDKPSSTRRVRIVLTK 118
S +DSDK S+T+RVRIVLTK
Sbjct: 83 GSSQDASHHHYLSPDFELKMGQVYYMLPSPQPTALLPPHSFTEDSDKSSNTKRVRIVLTK 142
BLAST of CmaCh15G009980 vs. NCBI nr
Match:
XP_011654573.1 (uncharacterized protein LOC105435418 [Cucumis sativus] >KGN49817.1 hypothetical protein Csa_000603 [Cucumis sativus])
HSP 1 Score: 123.2 bits (308), Expect = 1.4e-24
Identity = 84/170 (49.41%), Postives = 94/170 (55.29%), Query Frame = 0
Query: 1 MGNS-CASYRAILPCCLKVDAAHKQ--VEPLKIVKPDGKVLELTTPTL------------ 60
MGNS C SY PCCLKVDAAHKQ E LKIVK DGKVLE TTPTL
Sbjct: 1 MGNSCCVSYTIKFPCCLKVDAAHKQNHGEALKIVKSDGKVLEFTTPTLVKDVLVNFTGFV 60
Query: 61 --------------------------------------KPSLMDDSDKPSSTRRVRIVLT 118
S + DS K STRRVRIVLT
Sbjct: 61 IGSSQDVSHHHHLSPEFELKMGQVYYMLPSPQPTALPPPHSFIQDSHKSRSTRRVRIVLT 120
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1E387 | 7.9e-53 | 94.87 | uncharacterized protein LOC111430396 OS=Cucurbita moschata OX=3662 GN=LOC1114303... | [more] |
A0A0A0KN21 | 7.0e-25 | 49.41 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G138490 PE=4 SV=1 | [more] |
A0A5A7TGH5 | 1.7e-23 | 47.06 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3AUP7 | 1.7e-23 | 47.06 | uncharacterized protein LOC103483007 OS=Cucumis melo OX=3656 GN=LOC103483007 PE=... | [more] |
A0A5N6RF31 | 4.2e-06 | 30.38 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_016172 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_023551614.1 | 3.9e-54 | 95.73 | uncharacterized protein LOC111809394 [Cucurbita pepo subsp. pepo] | [more] |
XP_022922389.1 | 1.6e-52 | 94.87 | uncharacterized protein LOC111430396 [Cucurbita moschata] >KAG7016794.1 hypothet... | [more] |
KAG6579294.1 | 3.6e-52 | 94.02 | hypothetical protein SDJN03_23742, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_038875983.1 | 9.6e-29 | 52.07 | uncharacterized protein LOC120068327 [Benincasa hispida] | [more] |
XP_011654573.1 | 1.4e-24 | 49.41 | uncharacterized protein LOC105435418 [Cucumis sativus] >KGN49817.1 hypothetical ... | [more] |
Match Name | E-value | Identity | Description | |