CmaCh15G009980 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh15G009980
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr15: 6039105 .. 6039458 (+)
RNA-Seq ExpressionCmaCh15G009980
SyntenyCmaCh15G009980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAACTCATGTGCTTCCTACAGAGCCATCTTGCCTTGTTGCCTCAAGGTCGATGCAGCACACAAGCAGGTGGAACCTTTGAAGATTGTTAAACCAGACGGAAAGGTGTTGGAGCTCACCACGCCAACGCTCAAACCCAGCCTCATGGATGATTCAGACAAACCCAGCAGCACAAGGAGAGTAAGAATCGTTTTAACAAAGAAACAGCTCAAGCTGCTGGTGGACAAACAAGTGTCAATGGAAGAGCTAATTATGCAGCGGATTGAGAAAACCACGTTGTGCAGTGTTCTTGAATGTTCATCATCTTGGAAGCCTGCGCTGGCAGCCATTCCTGAAGGAAATGAAGCATAA

mRNA sequence

ATGGGTAACTCATGTGCTTCCTACAGAGCCATCTTGCCTTGTTGCCTCAAGGTCGATGCAGCACACAAGCAGGTGGAACCTTTGAAGATTGTTAAACCAGACGGAAAGGTGTTGGAGCTCACCACGCCAACGCTCAAACCCAGCCTCATGGATGATTCAGACAAACCCAGCAGCACAAGGAGAGTAAGAATCGTTTTAACAAAGAAACAGCTCAAGCTGCTGGTGGACAAACAAGTGTCAATGGAAGAGCTAATTATGCAGCGGATTGAGAAAACCACGTTGTGCAGTGTTCTTGAATGTTCATCATCTTGGAAGCCTGCGCTGGCAGCCATTCCTGAAGGAAATGAAGCATAA

Coding sequence (CDS)

ATGGGTAACTCATGTGCTTCCTACAGAGCCATCTTGCCTTGTTGCCTCAAGGTCGATGCAGCACACAAGCAGGTGGAACCTTTGAAGATTGTTAAACCAGACGGAAAGGTGTTGGAGCTCACCACGCCAACGCTCAAACCCAGCCTCATGGATGATTCAGACAAACCCAGCAGCACAAGGAGAGTAAGAATCGTTTTAACAAAGAAACAGCTCAAGCTGCTGGTGGACAAACAAGTGTCAATGGAAGAGCTAATTATGCAGCGGATTGAGAAAACCACGTTGTGCAGTGTTCTTGAATGTTCATCATCTTGGAAGCCTGCGCTGGCAGCCATTCCTGAAGGAAATGAAGCATAA

Protein sequence

MGNSCASYRAILPCCLKVDAAHKQVEPLKIVKPDGKVLELTTPTLKPSLMDDSDKPSSTRRVRIVLTKKQLKLLVDKQVSMEELIMQRIEKTTLCSVLECSSSWKPALAAIPEGNEA
Homology
BLAST of CmaCh15G009980 vs. ExPASy TrEMBL
Match: A0A6J1E387 (uncharacterized protein LOC111430396 OS=Cucurbita moschata OX=3662 GN=LOC111430396 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 7.9e-53
Identity = 111/117 (94.87%), Postives = 113/117 (96.58%), Query Frame = 0

Query: 1   MGNSCASYRAILPCCLKVDAAHKQVEPLKIVKPDGKVLELTTPTLKPSLMDDSDKPSSTR 60
           MGNSCASYRAILPCCLKVDAAH QVE LKIVKPDGKVL  TTPTLKPSLMDDSDKPSSTR
Sbjct: 1   MGNSCASYRAILPCCLKVDAAHNQVEALKIVKPDGKVLGFTTPTLKPSLMDDSDKPSSTR 60

Query: 61  RVRIVLTKKQLKLLVDKQVSMEELIMQRIEKTTLCSVLECSSSWKPALAAIPEGNEA 118
           RVRIVLTKKQLKLLVDKQVSMEEL+MQ+IEKTTLCSVLECSSSWKPALAAIPEGNEA
Sbjct: 61  RVRIVLTKKQLKLLVDKQVSMEELLMQQIEKTTLCSVLECSSSWKPALAAIPEGNEA 117

BLAST of CmaCh15G009980 vs. ExPASy TrEMBL
Match: A0A0A0KN21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G138490 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 7.0e-25
Identity = 84/170 (49.41%), Postives = 94/170 (55.29%), Query Frame = 0

Query: 1   MGNS-CASYRAILPCCLKVDAAHKQ--VEPLKIVKPDGKVLELTTPTL------------ 60
           MGNS C SY    PCCLKVDAAHKQ   E LKIVK DGKVLE TTPTL            
Sbjct: 1   MGNSCCVSYTIKFPCCLKVDAAHKQNHGEALKIVKSDGKVLEFTTPTLVKDVLVNFTGFV 60

Query: 61  --------------------------------------KPSLMDDSDKPSSTRRVRIVLT 118
                                                   S + DS K  STRRVRIVLT
Sbjct: 61  IGSSQDVSHHHHLSPEFELKMGQVYYMLPSPQPTALPPPHSFIQDSHKSRSTRRVRIVLT 120

BLAST of CmaCh15G009980 vs. ExPASy TrEMBL
Match: A0A5A7TGH5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00040 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.7e-23
Identity = 80/170 (47.06%), Postives = 94/170 (55.29%), Query Frame = 0

Query: 1   MGNS-CASYRAILPCCLKVDAAHKQ--VEPLKIVKPDGKVLELTTPTLKPSLM------- 60
           MGNS C SY    PCCLKVDAAHKQ   E LKIVK DGKVL+ TTPTL   ++       
Sbjct: 1   MGNSCCVSYTIKFPCCLKVDAAHKQNHGEALKIVKSDGKVLQFTTPTLVKDVLVNFTGFV 60

Query: 61  -------------------------------------------DDSDKPSSTRRVRIVLT 118
                                                       D  K SSTRRVRIVLT
Sbjct: 61  IGSSQDVSDHHHLSPDFELKMGQVYYMLPSPQAAAPPPPHTFIQDLHKSSSTRRVRIVLT 120

BLAST of CmaCh15G009980 vs. ExPASy TrEMBL
Match: A0A1S3AUP7 (uncharacterized protein LOC103483007 OS=Cucumis melo OX=3656 GN=LOC103483007 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.7e-23
Identity = 80/170 (47.06%), Postives = 94/170 (55.29%), Query Frame = 0

Query: 1   MGNS-CASYRAILPCCLKVDAAHKQ--VEPLKIVKPDGKVLELTTPTLKPSLM------- 60
           MGNS C SY    PCCLKVDAAHKQ   E LKIVK DGKVL+ TTPTL   ++       
Sbjct: 1   MGNSCCVSYTIKFPCCLKVDAAHKQNHGEALKIVKSDGKVLQFTTPTLVKDVLVNFTGFV 60

Query: 61  -------------------------------------------DDSDKPSSTRRVRIVLT 118
                                                       D  K SSTRRVRIVLT
Sbjct: 61  IGSSQDVSDHHHLSPDFELKMGQVYYMLPSPQAAAPPPPHTFIQDLHKSSSTRRVRIVLT 120

BLAST of CmaCh15G009980 vs. ExPASy TrEMBL
Match: A0A5N6RF31 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_016172 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 4.2e-06
Identity = 48/158 (30.38%), Postives = 75/158 (47.47%), Query Frame = 0

Query: 1   MGNSCASYRAILPCCLKVDAAHKQVEPLKIVKPDGKVLELTTPTLKPSLM---------- 60
           MGN  A  +     C+  D A K    L++VK DGKVLE + PT+   ++          
Sbjct: 1   MGNCVAPCKTRKELCI-TDVAAKPERVLQVVKMDGKVLEFSMPTIVKDILVNFSGTGIGL 60

Query: 61  -------------------------------DDSDKPS-STRRVRIVLTKKQLKLLVDKQ 117
                                          DD +K     +R++IV+TK+QL+ L+ KQ
Sbjct: 61  SKEASEHLPPNYELKMGKVYYMLPADISSTPDDVEKADRGVKRIKIVITKQQLQDLLTKQ 120

BLAST of CmaCh15G009980 vs. NCBI nr
Match: XP_023551614.1 (uncharacterized protein LOC111809394 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.5 bits (563), Expect = 3.9e-54
Identity = 112/117 (95.73%), Postives = 117/117 (100.00%), Query Frame = 0

Query: 1   MGNSCASYRAILPCCLKVDAAHKQVEPLKIVKPDGKVLELTTPTLKPSLMDDSDKPSSTR 60
           MGNSCASYRAILPCCLKVDAAHKQVEPL+IVKPDGKVLELTTPTLKP+LMDDSDKPSSTR
Sbjct: 1   MGNSCASYRAILPCCLKVDAAHKQVEPLEIVKPDGKVLELTTPTLKPNLMDDSDKPSSTR 60

Query: 61  RVRIVLTKKQLKLLVDKQVSMEELIMQRIEKTTLCSVLECSSSWKPALAAIPEGNEA 118
           RV+IVLTKKQLKLLVDKQVSMEEL+MQ+IEKTTLCSVLECSSSWKPALAAIPEGNEA
Sbjct: 61  RVKIVLTKKQLKLLVDKQVSMEELLMQQIEKTTLCSVLECSSSWKPALAAIPEGNEA 117

BLAST of CmaCh15G009980 vs. NCBI nr
Match: XP_022922389.1 (uncharacterized protein LOC111430396 [Cucurbita moschata] >KAG7016794.1 hypothetical protein SDJN02_21905, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 216.1 bits (549), Expect = 1.6e-52
Identity = 111/117 (94.87%), Postives = 113/117 (96.58%), Query Frame = 0

Query: 1   MGNSCASYRAILPCCLKVDAAHKQVEPLKIVKPDGKVLELTTPTLKPSLMDDSDKPSSTR 60
           MGNSCASYRAILPCCLKVDAAH QVE LKIVKPDGKVL  TTPTLKPSLMDDSDKPSSTR
Sbjct: 1   MGNSCASYRAILPCCLKVDAAHNQVEALKIVKPDGKVLGFTTPTLKPSLMDDSDKPSSTR 60

Query: 61  RVRIVLTKKQLKLLVDKQVSMEELIMQRIEKTTLCSVLECSSSWKPALAAIPEGNEA 118
           RVRIVLTKKQLKLLVDKQVSMEEL+MQ+IEKTTLCSVLECSSSWKPALAAIPEGNEA
Sbjct: 61  RVRIVLTKKQLKLLVDKQVSMEELLMQQIEKTTLCSVLECSSSWKPALAAIPEGNEA 117

BLAST of CmaCh15G009980 vs. NCBI nr
Match: KAG6579294.1 (hypothetical protein SDJN03_23742, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 214.9 bits (546), Expect = 3.6e-52
Identity = 110/117 (94.02%), Postives = 113/117 (96.58%), Query Frame = 0

Query: 1   MGNSCASYRAILPCCLKVDAAHKQVEPLKIVKPDGKVLELTTPTLKPSLMDDSDKPSSTR 60
           MGNSCASYRAILPCCLKVDAAH QVE LKIVKPDG+VL  TTPTLKPSLMDDSDKPSSTR
Sbjct: 1   MGNSCASYRAILPCCLKVDAAHNQVEALKIVKPDGRVLGFTTPTLKPSLMDDSDKPSSTR 60

Query: 61  RVRIVLTKKQLKLLVDKQVSMEELIMQRIEKTTLCSVLECSSSWKPALAAIPEGNEA 118
           RVRIVLTKKQLKLLVDKQVSMEEL+MQ+IEKTTLCSVLECSSSWKPALAAIPEGNEA
Sbjct: 61  RVRIVLTKKQLKLLVDKQVSMEELLMQQIEKTTLCSVLECSSSWKPALAAIPEGNEA 117

BLAST of CmaCh15G009980 vs. NCBI nr
Match: XP_038875983.1 (uncharacterized protein LOC120068327 [Benincasa hispida])

HSP 1 Score: 137.1 bits (344), Expect = 9.6e-29
Identity = 88/169 (52.07%), Postives = 99/169 (58.58%), Query Frame = 0

Query: 1   MGNSCASYRAILPCCLKVDAAH--KQVEPLKIVKPDGKVLELTTPTL------------- 60
           MGNSC SYR  LPCCLKVDAAH  KQ E LKIVK DGKVLE  TPTL             
Sbjct: 23  MGNSCVSYRIKLPCCLKVDAAHRKKQGEALKIVKSDGKVLEFITPTLVKDVLVNFSGFVI 82

Query: 61  -------------------------------------KPSLMDDSDKPSSTRRVRIVLTK 118
                                                  S  +DSDK S+T+RVRIVLTK
Sbjct: 83  GSSQDASHHHYLSPDFELKMGQVYYMLPSPQPTALLPPHSFTEDSDKSSNTKRVRIVLTK 142

BLAST of CmaCh15G009980 vs. NCBI nr
Match: XP_011654573.1 (uncharacterized protein LOC105435418 [Cucumis sativus] >KGN49817.1 hypothetical protein Csa_000603 [Cucumis sativus])

HSP 1 Score: 123.2 bits (308), Expect = 1.4e-24
Identity = 84/170 (49.41%), Postives = 94/170 (55.29%), Query Frame = 0

Query: 1   MGNS-CASYRAILPCCLKVDAAHKQ--VEPLKIVKPDGKVLELTTPTL------------ 60
           MGNS C SY    PCCLKVDAAHKQ   E LKIVK DGKVLE TTPTL            
Sbjct: 1   MGNSCCVSYTIKFPCCLKVDAAHKQNHGEALKIVKSDGKVLEFTTPTLVKDVLVNFTGFV 60

Query: 61  --------------------------------------KPSLMDDSDKPSSTRRVRIVLT 118
                                                   S + DS K  STRRVRIVLT
Sbjct: 61  IGSSQDVSHHHHLSPEFELKMGQVYYMLPSPQPTALPPPHSFIQDSHKSRSTRRVRIVLT 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1E3877.9e-5394.87uncharacterized protein LOC111430396 OS=Cucurbita moschata OX=3662 GN=LOC1114303... [more]
A0A0A0KN217.0e-2549.41Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G138490 PE=4 SV=1[more]
A0A5A7TGH51.7e-2347.06Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3AUP71.7e-2347.06uncharacterized protein LOC103483007 OS=Cucumis melo OX=3656 GN=LOC103483007 PE=... [more]
A0A5N6RF314.2e-0630.38Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_016172 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_023551614.13.9e-5495.73uncharacterized protein LOC111809394 [Cucurbita pepo subsp. pepo][more]
XP_022922389.11.6e-5294.87uncharacterized protein LOC111430396 [Cucurbita moschata] >KAG7016794.1 hypothet... [more]
KAG6579294.13.6e-5294.02hypothetical protein SDJN03_23742, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038875983.19.6e-2952.07uncharacterized protein LOC120068327 [Benincasa hispida][more]
XP_011654573.11.4e-2449.41uncharacterized protein LOC105435418 [Cucumis sativus] >KGN49817.1 hypothetical ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33148PLASTID MOVEMENT IMPAIRED PROTEIN-RELATEDcoord: 53..116
NoneNo IPR availablePANTHERPTHR33148:SF2DUF4228 DOMAIN PROTEINcoord: 53..116

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh15G009980.1CmaCh15G009980.1mRNA