CmaCh14G012160 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTAAGATTTGATTGGAAGTTCCACTAGAATTGAAACTAACCAGCAGATTATGGAAATGACGGAATGGCCAATTTGACAATAAATTAATGCTCAAATGCACAAAGGGAGTGATCGAGATGAAGCAAATTGGGTCCCAAATTTTCATGATTTGCAAGGTTTTCAACGCTTGTTTTGTTTAATATGAAATCCATTGAAGGACGGTTTGGTTGCCGTAAGCATCTTTTTAAATCTCGAAGACCAAACTCTTTCAAGACCTCCAATGACAATGGCGATGACCGGCACAAATTGCAGATCTCCTCCTTTTGCCCTAAATTCTGCTACATCTCTTCAAACTAAACCTCTGAGCGAAGTTTTTATGCTCAAACCTGCAAAATTTTCACTCAACAGAACTCTCACTCTCCAAATTACATGTTCTTTAAAGAACAACGTGGTTAGTCTCTCTCCCTGTGATCTAAACTTCTTAGATCAGATCATTGTTCTTACAGTCTAGTTGATTTTGGCAGGTTTTCGAGGATCGTTCTAATGGCGTGATTTGCTACAGAGACGACGATGGAGAGATTATTTGCGAAGGATATGATGACGAAGAGCCTCGTATTGAGCAAGAGATTGAGAAATTACCTTGCGAAAAGTCTCGTCGAAGGTAGAAACCAGATCTTGATTAATTCTCGAATGAATCTAGAGGCCGCATCGTAATATATGCTTTTCTTTGTTCTGAATTCTGATTCCTGTTCTGTGTTTCCGCGGATTCTAAGATCTGATGGCGAATTGAAGATCGATCGTCTTCTCCTGCAGCAAAATTGGGAGAAGAGCTTAGAAACCATTAATGGCGGTGCTGGAAGTGGAAGAGGAGAGCTTCGAATTCGAGCGAATGGCTTCAGTTTGTAGTAATTGCTTAGCTCAAGAACTGGAAATTGCAGGTCAAATGAAAGGGGAAATTGTGGTTTCCTTGTTTAGAATTTGTACAATTTTACCTCTATCATAGGCTCTTGTAAACATAGCATACAATAAATTGTAAAAAATCCTAAAAACTCCTTTGTTTGTAATAATGTAAATTATTTGAAATGTTTGTAAGATCCCAACCCTACCACTAATGGATATCGTCAATTTTTGTTCGTTCGTATTATCGTCAGCTTTATAGTTTAAAACCCAAGCTCATTATTACTAGCTGATATTGTCCGTCTTGATCCTGTTACGTAGCGTTATCAAGAAAAATTTGCTCCTAC AGTAAGATTTGATTGGAAGTTCCACTAGAATTGAAACTAACCAGCAGATTATGGAAATGACGGAATGGCCAATTTGACAATAAATTAATGCTCAAATGCACAAAGGGAGTGATCGAGATGAAGCAAATTGGGTCCCAAATTTTCATGATTTGCAAGGTTTTCAACGCTTGTTTTGTTTAATATGAAATCCATTGAAGGACGGTTTGGTTGCCGTAAGCATCTTTTTAAATCTCGAAGACCAAACTCTTTCAAGACCTCCAATGACAATGGCGATGACCGGCACAAATTGCAGATCTCCTCCTTTTGCCCTAAATTCTGCTACATCTCTTCAAACTAAACCTCTGAGCGAAGTTTTTATGCTCAAACCTGCAAAATTTTCACTCAACAGAACTCTCACTCTCCAAATTACATGTTCTTTAAAGAACAACGTGGTTTTCGAGGATCGTTCTAATGGCGTGATTTGCTACAGAGACGACGATGGAGAGATTATTTGCGAAGGATATGATGACGAAGAGCCTCGTATTGAGCAAGAGATTGAGAAATTACCTTGCGAAAAGTCTCGTCGAAGATCTGATGGCGAATTGAAGATCGATCGTCTTCTCCTGCAGCAAAATTGGGAGAAGAGCTTAGAAACCATTAATGGCGGTGCTGGAAGTGGAAGAGGAGAGCTTCGAATTCGAGCGAATGGCTTCAGTTTGTAGTAATTGCTTAGCTCAAGAACTGGAAATTGCAGGTCAAATGAAAGGGGAAATTGTGGTTTCCTTGTTTAGAATTTGTACAATTTTACCTCTATCATAGGCTCTTGTAAACATAGCATACAATAAATTGTAAAAAATCCTAAAAACTCCTTTGTTTGTAATAATGTAAATTATTTGAAATGTTTGTAAGATCCCAACCCTACCACTAATGGATATCGTCAATTTTTGTTCGTTCGTATTATCGTCAGCTTTATAGTTTAAAACCCAAGCTCATTATTACTAGCTGATATTGTCCGTCTTGATCCTGTTACGTAGCGTTATCAAGAAAAATTTGCTCCTAC ATGACAATGGCGATGACCGGCACAAATTGCAGATCTCCTCCTTTTGCCCTAAATTCTGCTACATCTCTTCAAACTAAACCTCTGAGCGAAGTTTTTATGCTCAAACCTGCAAAATTTTCACTCAACAGAACTCTCACTCTCCAAATTACATGTTCTTTAAAGAACAACGTGGTTTTCGAGGATCGTTCTAATGGCGTGATTTGCTACAGAGACGACGATGGAGAGATTATTTGCGAAGGATATGATGACGAAGAGCCTCGTATTGAGCAAGAGATTGAGAAATTACCTTGCGAAAAGTCTCGTCGAAGATCTGATGGCGAATTGAAGATCGATCGTCTTCTCCTGCAGCAAAATTGGGAGAAGAGCTTAGAAACCATTAATGGCGGTGCTGGAAGTGGAAGAGGAGAGCTTCGAATTCGAGCGAATGGCTTCAGTTTGTAG MTMAMTGTNCRSPPFALNSATSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFEDRSNGVICYRDDDGEIICEGYDDEEPRIEQEIEKLPCEKSRRRSDGELKIDRLLLQQNWEKSLETINGGAGSGRGELRIRANGFSL Homology
BLAST of CmaCh14G012160 vs. ExPASy TrEMBL
Match: A0A6J1J044 (uncharacterized protein LOC111480023 OS=Cucurbita maxima OX=3661 GN=LOC111480023 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 5.4e-75 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of CmaCh14G012160 vs. ExPASy TrEMBL
Match: A0A6J1GXI0 (uncharacterized protein LOC111458058 OS=Cucurbita moschata OX=3662 GN=LOC111458058 PE=4 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 1.1e-72 Identity = 142/146 (97.26%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of CmaCh14G012160 vs. ExPASy TrEMBL
Match: A0A5D3D6I4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00800 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 2.1e-50 Identity = 106/142 (74.65%), Postives = 117/142 (82.39%), Query Frame = 0
BLAST of CmaCh14G012160 vs. ExPASy TrEMBL
Match: A0A1S3CC94 (uncharacterized protein LOC103499196 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499196 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 2.1e-50 Identity = 106/142 (74.65%), Postives = 117/142 (82.39%), Query Frame = 0
BLAST of CmaCh14G012160 vs. ExPASy TrEMBL
Match: A0A0A0LCR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G646590 PE=4 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 2.3e-49 Identity = 105/142 (73.94%), Postives = 115/142 (80.99%), Query Frame = 0
BLAST of CmaCh14G012160 vs. NCBI nr
Match: XP_022980749.1 (uncharacterized protein LOC111480023 [Cucurbita maxima]) HSP 1 Score: 290.0 bits (741), Expect = 1.1e-74 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of CmaCh14G012160 vs. NCBI nr
Match: XP_022956325.1 (uncharacterized protein LOC111458058 [Cucurbita moschata] >KAG6581790.1 hypothetical protein SDJN03_21792, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 282.3 bits (721), Expect = 2.3e-72 Identity = 142/146 (97.26%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of CmaCh14G012160 vs. NCBI nr
Match: KAG7018241.1 (hypothetical protein SDJN02_20109 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 280.8 bits (717), Expect = 6.7e-72 Identity = 141/146 (96.58%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of CmaCh14G012160 vs. NCBI nr
Match: XP_023526222.1 (uncharacterized protein LOC111789773 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 274.6 bits (701), Expect = 4.8e-70 Identity = 141/148 (95.27%), Postives = 141/148 (95.27%), Query Frame = 0
BLAST of CmaCh14G012160 vs. NCBI nr
Match: XP_038900432.1 (uncharacterized protein LOC120087657 [Benincasa hispida]) HSP 1 Score: 226.1 bits (575), Expect = 2.0e-55 Identity = 118/144 (81.94%), Postives = 127/144 (88.19%), Query Frame = 0
BLAST of CmaCh14G012160 vs. TAIR 10
Match: AT3G14280.1 (unknown protein; Has 51 Blast hits to 51 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.1 bits (118), Expect = 1.8e-06 Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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